mRNA_L-elsbetiae_contig2092.6330.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig2092.6330.1 vs. uniprot
Match: D7G1Y3_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Y3_ECTSI) HSP 1 Score: 104 bits (259), Expect = 7.540e-21 Identity = 70/144 (48.61%), Postives = 88/144 (61.11%), Query Frame = 1 Query: 403 GVPHLISPKIVRLLIDAGADPSSAVHFMVYSPEGGVPFDGTLLAFTNQCLREKKAGGIQDAREEQIYRLEAVRRLLLRVEAVHAVSWLWLREPLVIDSAAEEDSSRTARNASASGTQLTSRFPILRCR--RRGVLLAPLFRYSS 828 G+ L P+IVRLL+D+GAD SAV + +G V F T L T + LR+ + G +D +EEQ+ RLEAVRRLLLRVEAVHA SW+W P + +D++ A T+LTS ILR R RRGVLL L RYSS Sbjct: 237 GIIKLCFPRIVRLLVDSGADTESAVRYTYR--DGLVGFSDTPLCRTIRILRDVETEG-KDDKEEQLGRLEAVRRLLLRVEAVHATSWVW---PSSAAGSVAQDAAEVKAGAETEPTRLTSTLQILRRRATRRGVLLRALSRYSS 374
BLAST of mRNA_L-elsbetiae_contig2092.6330.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 99.4 bits (246), Expect = 1.050e-18 Identity = 60/125 (48.00%), Postives = 75/125 (60.00%), Query Frame = 2 Query: 2 ANPLLGMKSS-GTDAVIPLNSVTIGGHWKVVRQLIQQVGIAGCGGGSIGVNTLMHAAMVPHVNIMEMLMDAGVVDTGRALDFAAGHGREVGVKFLLQGRQRWGGCSDSVVRYVNWRKSGVYTPLL 373 ANPLL S G +PL+ GH VVR+LIQ++GI GC S G + L AA H++IM +L +AGVVDTG+AL AAG G E VKFLL+ R + GGC Y+N R YTPL+ Sbjct: 264 ANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGA-YLNARDVNGYTPLV 387
BLAST of mRNA_L-elsbetiae_contig2092.6330.1 vs. uniprot
Match: D8LSC5_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC5_ECTSI) HSP 1 Score: 92.8 bits (229), Expect = 7.600e-18 Identity = 66/147 (44.90%), Postives = 83/147 (56.46%), Query Frame = 1 Query: 421 SPKIVRLLIDAGADPSSAVHFMVYSPEGGVPFDGTLLAFTNQCLREKKAGGIQDAREEQIYRLEAVRRLLLRVEAVHAVSWLWLREPLVIDSAAEEDSSRTARNASASGTQLTSRFPILRCRRRG--VLLAPLFRYSSYP*FEGLAR 855 +P+IVRLL+DAGAD +S V V + GGV ++ T LA T LREK G + A EEQ++RL+A+RRLLLRV+AVHAVSWLW + I A E R S T PIL+ R + V +A L R S G R Sbjct: 77 NPRIVRLLVDAGADTTSTVR--VTNLNGGVEYNDTPLAVTTSLLREKVVDG-KPATEEQLHRLQAIRRLLLRVDAVHAVSWLWPSDAPSIVHAVERSCGPEPRRPPLSLT-----LPILKRRAKTCHVFVATLLRSSPISSGRGSRR 215
BLAST of mRNA_L-elsbetiae_contig2092.6330.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI) HSP 1 Score: 92.4 bits (228), Expect = 1.310e-16 Identity = 69/144 (47.92%), Postives = 85/144 (59.03%), Query Frame = 1 Query: 403 GVPHLISPKIVRLLIDAGADPSSAVHFMVYSPEGGVPFDGTLLAFTNQCLREKKAGGIQDAREEQIYRLEAVRRLLLRVEAVHAVSWLWLR-EPLVIDSAAEEDSSRTARNASASGTQLTSRFPILRCR--RRGVLLAPLFRYS 825 G L SPKIVRLL+DAGA+ + AV +P + T LAFT + LRE + G + A +EQ+ RL+ R LL R EAVHAVSWLW EP I AA + + TA A A T L + P+LR + RGVLL LFRYS Sbjct: 294 GAGRLCSPKIVRLLVDAGANTTRAVGVTRITPRWEKTSE-TPLAFTTRLLREGRVDG-EAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPPRIAQAAGDTKTETASTAVA--TPLRAMSPMLRRKPGTRGVLLKTLFRYS 433
BLAST of mRNA_L-elsbetiae_contig2092.6330.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 91.3 bits (225), Expect = 3.160e-16 Identity = 69/153 (45.10%), Postives = 87/153 (56.86%), Query Frame = 1 Query: 385 VSPDEKGVPHLISPKIVRLLIDAGADPSSAVHFMVYSPEGGVPFDGTLLAFTNQCLREK-KAGGIQDAREEQIYRLEAVRRLLLRVEAVHAVSWLWLREPLVIDSAAEEDSSRTARNASASGTQLTSRFPILRCRRRG--VLLAPLFRYSSYP 834 V+P G+ H P++VRLL++AGAD +S V V + GG T L T +R+K K G A EQ+++LEA+RRLLLRVEAVHAVSWLW + I AA + RT A T +T + R R RG V LA L RYSS P Sbjct: 290 VTPLLWGIQHY-RPRVVRLLVEAGADTTSPVA--VRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTDRTT----AISTAVTLPMLVTRRRARGRKVPLAALLRYSSKP 435
BLAST of mRNA_L-elsbetiae_contig2092.6330.1 vs. uniprot
Match: D8LNF8_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF8_ECTSI) HSP 1 Score: 87.8 bits (216), Expect = 8.330e-16 Identity = 51/104 (49.04%), Postives = 66/104 (63.46%), Query Frame = 2 Query: 2 ANPLLGMKSSGTDAVIPLNSVTIGGHWKVVRQLIQQVGIAGCGGGSIGVNTLMHAAMVPHVNIMEMLMDAGVVDTGRALDFAAGHGREVGVKFLLQGRQRWGGC 313 ANPLL +S +PL++ G +VV++L+QQV I GCGG S GV+ L AA+ +V++M +L D GV+DTG AL AAG E GVK LLQ QR G C Sbjct: 174 ANPLLTKPTSSGVTFVPLDTAAEYGQTEVVQELVQQVSIKGCGGASGGVDALRLAALSQNVDVMAVLADVGVMDTGEALITAAGRNDEAGVKLLLQ--QRHGAC 275
BLAST of mRNA_L-elsbetiae_contig2092.6330.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE) HSP 1 Score: 89.4 bits (220), Expect = 1.520e-15 Identity = 59/125 (47.20%), Postives = 74/125 (59.20%), Query Frame = 2 Query: 2 ANPLLGMKS-SGTDAVIPLNSVTIGGHWKVVRQLIQQVGIAGCGGGSIGVNTLMHAAMVPHVNIMEMLMDAGVVDTGRALDFAAGHGREVGVKFLLQGRQRWGGCSDSVVRYVNWRKSGVYTPLL 373 A+PLL S SG + +PL+ GH +VV +LI+QVGI GCGG S G N L AA+ ++IM +L DAGVVDTG AL AAG+G E +KFLL+ Q G S Y+N T LL Sbjct: 172 ADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLE--QARGRKSTDRAAYMNTLNGVGLTSLL 294
BLAST of mRNA_L-elsbetiae_contig2092.6330.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI) HSP 1 Score: 87.0 bits (214), Expect = 6.650e-15 Identity = 77/193 (39.90%), Postives = 104/193 (53.89%), Query Frame = 1 Query: 295 AAVGGLLRQCS*IRQLAQIWRLHTLAPSIHVSPDEKGVPHLI-----------SPKIVRLLIDAGADPSSAVHFMVYSPEGGVPFDGTLLAFTNQ-CLREKKAGGIQDAREEQIYRLEAVRRLLLRVEAVHAVSWLWLRE-PLVIDSAAEEDSSRTARNASASGTQLTSRFPILRCR--RRGVLLAPLFRYSS 828 AAVG LLRQ + W+ ++++ D+ G+ L+ +P+I R L+DAGAD +SAV V + T L + N LRE G A +EQ+ RLEA RR+LLRV AVHAVSW+W + PL+ A +S RTA++ S TQLT+ P+LR R RR +L LFRYS Sbjct: 232 AAVGFLLRQQE------ERWQ----TSYVNIARDDDGLTALLWSFRGNKNKPCNPRITRRLVDAGADTTSAVQLRAKRSRTCV--NVTPLEYVNDWALRE--TNGDHPATDEQLLRLEATRRVLLRVVAVHAVSWIWPSDAPLLARPA---NSPRTAKH---SPTQLTTVLPVLRRRAGRRALLWDTLFRYSK 404
BLAST of mRNA_L-elsbetiae_contig2092.6330.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI) HSP 1 Score: 85.5 bits (210), Expect = 2.470e-14 Identity = 51/125 (40.80%), Postives = 72/125 (57.60%), Query Frame = 2 Query: 8 PLLGMKSSGTDAVIPLNSVTIGGHWKVVRQLIQQVGIAGCGGGSIGVNTLMHAAMVPHVNIMEMLMDAGVVDTGRALDFAAGHGREVGVKFLLQGRQRWGGCSDSVVRYVNWRKSGV-YTPLLQA 379 PLL + S + +PL+ + GH V R+L+Q+ GI GC G S GV+ L AA+ H+++M +L DAGVVDTG AL GRE +KFLL+ + G + Y + + G +TPLL A Sbjct: 170 PLLPTRMSSGNTFVPLDGAALNGHLAVARELVQRFGIRGCAGASAGVDALGQAAVDQHLDVMALLCDAGVVDTGNALVATVFLGRERALKFLLEQK----GEGTARTTYASTPRDGRGHTPLLSA 290
BLAST of mRNA_L-elsbetiae_contig2092.6330.1 vs. uniprot
Match: A0A6H5JL33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL33_9PHAE) HSP 1 Score: 85.1 bits (209), Expect = 3.090e-14 Identity = 54/114 (47.37%), Postives = 68/114 (59.65%), Query Frame = 2 Query: 2 ANPLLGMKSSGTDAVIPLNSVTIGGHWKVVRQLIQQVGIAGCGGGSIGVNTLMHAAMVPHVNIMEMLMDAGVVDTGRALDFAAGHGREVGVKFLLQGRQRWG-GCSDSVVRYVN 340 ANPLL + +PL++ G +VVR+LI+QV I GCGG S GV L AA+ +V++M +L DAGV+DTG AL AAG E GVK LLQ QR G + YVN Sbjct: 174 ANPLLTKPTPSGVTFVPLDTAAEYGQTEVVRELIKQVSIKGCGGASGGVYALRLAALSQNVDVMSVLADAGVMDTGEALITAAGRNDEAGVKLLLQ--QRHGTSAGGELYMYVN 285 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2092.6330.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig2092.6330.1 >prot_L-elsbetiae_contig2092.6330.1 ID=prot_L-elsbetiae_contig2092.6330.1|Name=mRNA_L-elsbetiae_contig2092.6330.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=133bp MKSSGTDAVIPLNSVTIGGHWKVVRQLIQQVGIAGCGGGSIGVNTLMHAAback to top mRNA from alignment at L-elsbetiae_contig2092:17703..19887- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig2092.6330.1 ID=mRNA_L-elsbetiae_contig2092.6330.1|Name=mRNA_L-elsbetiae_contig2092.6330.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2185bp|location=Sequence derived from alignment at L-elsbetiae_contig2092:17703..19887- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig2092:17703..19887- >mRNA_L-elsbetiae_contig2092.6330.1 ID=mRNA_L-elsbetiae_contig2092.6330.1|Name=mRNA_L-elsbetiae_contig2092.6330.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=798bp|location=Sequence derived from alignment at L-elsbetiae_contig2092:17703..19887- (Laminarionema elsbetiae ELsaHSoW15)back to top |