mRNA_L-elsbetiae_contig2048.6171.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig2048.6171.1
Unique NamemRNA_L-elsbetiae_contig2048.6171.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig2048.6171.1 vs. uniprot
Match: A0A6H5JCU9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCU9_9PHAE)

HSP 1 Score: 339 bits (869), Expect = 3.370e-108
Identity = 166/193 (86.01%), Postives = 177/193 (91.71%), Query Frame = 1
Query:  454 QVTPSFNGGEPITREYYDDWMSGNSNTAIVEKLFPEMPTDDQTALWKSKEEVYRLISTKMTPLPGLLAFLDRCRSRGLAMILVTNAPRLDAVHTLEVLNLSDRFSETMVIGYECARSKPHPDPYLEGLSRIGLSADACVAFEDSVNGVSSAVSAGLYTFGVGEGSQQRLEGAIGGGICVSDYLDSRLPEALGL 1032
            +VTPSFNGGE I+REYYDDWMSGNSN AIVEKLFPEM  +DQTALWK+KEEVYR IST MTPLPGLL FLD C+S GLAMILVTNAPRLDAVHTL +L LSDRF ETMVIGYECAR+KPHPDPYLEGLSR+GL ADACVAFEDSVNGVSSAVSAGLYTFGVGEGSQ+RL+G IGGGICVSDYLDSRL  ALG+
Sbjct:  127 KVTPSFNGGERISREYYDDWMSGNSNPAIVEKLFPEMLAEDQTALWKAKEEVYRKISTTMTPLPGLLKFLDCCQSEGLAMILVTNAPRLDAVHTLNILGLSDRFEETMVIGYECARAKPHPDPYLEGLSRLGLPADACVAFEDSVNGVSSAVSAGLYTFGVGEGSQERLKGVIGGGICVSDYLDSRLYAALGV 319          
BLAST of mRNA_L-elsbetiae_contig2048.6171.1 vs. uniprot
Match: D8LK30_ECTSI (Haloacid dehalogenase-like hydrolase family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK30_ECTSI)

HSP 1 Score: 330 bits (846), Expect = 2.520e-106
Identity = 162/193 (83.94%), Postives = 174/193 (90.16%), Query Frame = 1
Query:  454 QVTPSFNGGEPITREYYDDWMSGNSNTAIVEKLFPEMPTDDQTALWKSKEEVYRLISTKMTPLPGLLAFLDRCRSRGLAMILVTNAPRLDAVHTLEVLNLSDRFSETMVIGYECARSKPHPDPYLEGLSRIGLSADACVAFEDSVNGVSSAVSAGLYTFGVGEGSQQRLEGAIGGGICVSDYLDSRLPEALGL 1032
            ++TPSFNGGE I+REYYDDWMSGNSN AIVEKLFPEM  +DQTALWK+KEEVYR IST MT LPGLL FLD C+S GLAMILVTNAPRLDAVHTL +L LSDRF ETMVIGYEC R+KPHPDPYLEGLSR+ L ADACVAFEDSVNGVSSAVSAGLYTFGVGEGSQ+RL+G IGGGICVSDYLDSRL  ALG+
Sbjct:   22 KLTPSFNGGERISREYYDDWMSGNSNPAIVEKLFPEMLAEDQTALWKAKEEVYRKISTTMTLLPGLLEFLDGCQSEGLAMILVTNAPRLDAVHTLNILGLSDRFEETMVIGYECPRAKPHPDPYLEGLSRLDLPADACVAFEDSVNGVSSAVSAGLYTFGVGEGSQERLKGVIGGGICVSDYLDSRLHAALGV 214          
BLAST of mRNA_L-elsbetiae_contig2048.6171.1 vs. uniprot
Match: A0A835ZE39_9STRA (HAD-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE39_9STRA)

HSP 1 Score: 214 bits (546), Expect = 7.560e-61
Identity = 104/198 (52.53%), Postives = 136/198 (68.69%), Query Frame = 1
Query:  454 QVTPSFNGGEPITREYYDDWMSGNSNTAIVEKLFPEMPTDDQTALWKSKEEVYRLISTKMTPLPGLLAFLDRC------RSRGLAMILVTNAPRLDAVHTLEVLNLSDRFSETMVIGYECARSKPHPDPYLEGLSRIGLSADACVAFEDSVNGVSSAVSAGLYTFGVGEGSQQRLEGAIGGGICVSDYLDSRLPEALG 1029
            ++ P  NGG+PI + +Y +WMSGNSN  I  +LFP+MP   Q  +W  KE +YR IST M PLPGL   L+ C      ++R +A I+VTNAPRLDA HT+EVL + +RF  T+VIG ECAR+KPHP+PYLEGL R+GL+A  C+AFEDS+NG  SA +AGL+T GV  G  +      G G+C++D+ D RL   LG
Sbjct:   93 EMRPDHNGGKPIDKAWYKEWMSGNSNAVITARLFPDMPLAQQEEMWDRKEALYRRISTAMAPLPGLARLLEWCDLEDDDKAR-IATIIVTNAPRLDARHTMEVLGIHERFGNTVVIGAECARAKPHPEPYLEGLRRLGLAARDCIAFEDSLNGCRSATAAGLFTVGVTTGLDEAALRGAGAGVCIADFTDERLWALLG 289          
BLAST of mRNA_L-elsbetiae_contig2048.6171.1 vs. uniprot
Match: A0A2V3J516_9FLOR (Haloacid dehalogenase-like hydrolase domain-containing protein Sgpp n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J516_9FLOR)

HSP 1 Score: 162 bits (411), Expect = 3.110e-42
Identity = 79/192 (41.15%), Postives = 114/192 (59.38%), Query Frame = 1
Query:  454 QVTPSFNGGEPITREYYDDWMSGNSNTAIVEKLFPEMPTDDQTALWKSKEEVYR-LISTKMTPLPGLLAFLDRCRSRGLAMILVTNAPRLDAVHTLEVLNLSDRFSETMVIGYECARSKPHPDPYLEGLSRIGLSADACVAFEDSVNGVSSAVSAGLYTFGVGEGSQQRLEGAIGGGICVSDYLDSRLPEAL 1026
            ++ PSFNGG+PITRE+YD  MSG  N  +V K+ P++P  +QT LW++KE  Y  +IS  ++P+ GL+  + RC+  G+   +VTNAP+   V T+  + +++ F   +V+  EC   KPHP PYL  L   G+SA   +AFEDS +G  SA+ AGL T G+          + G    V DY D +L  AL
Sbjct:   46 ELIPSFNGGKPITREFYDSEMSGRQNPELVSKILPQLPLHEQTRLWQTKESRYEDVISKGVSPIAGLIELIKRCKQDGIITYIVTNAPKGTCVKTVSSIGITEYFGSHVVVAEECEYPKPHPAPYLRALELAGVSAKEAIAFEDSPSGTRSAIGAGLLTIGMRSTQSDETLRSFGAAFTVRDYNDPKLLSAL 237          
BLAST of mRNA_L-elsbetiae_contig2048.6171.1 vs. uniprot
Match: W7TRE2_9STRA (Had family hydrolase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRE2_9STRA)

HSP 1 Score: 157 bits (398), Expect = 8.510e-40
Identity = 76/162 (46.91%), Postives = 106/162 (65.43%), Query Frame = 1
Query:  454 QVTPSFNGGEPITREYYDDWMSGNSNTAIVEKLFPEMPTDDQTALWKSKEEVYRLISTKMTPLPGLLAFLDRCRSRGLAMILVTNAPRLDAVHTLEVLNLSDRFSET-MVIGYECARSKPHPDPYLEGLSRIGLSADACVAFEDSVNGVSSAVSAGLYTFGV 936
            +  P +N G P+ R +YD  +SG++N  IV  L P  P D    LW +KE +YR  S  ++PLPG++  LD C    +  +LVTNAPR++ +HTL  L L DRF ++ ++IG E AR KP PD Y EGL R+GL+A  C+AFEDS +G++SAV+AG+ T  V
Sbjct:  100 KFAPEYNDGRPLERAFYDQKLSGSANEIIVPMLLPHWPQDRMEELWLAKEALYRERSANISPLPGVIRLLDWCTENKIGYVLVTNAPRVECLHTLHSLKLKDRFHDSKIIIGQEMARPKPFPDAYNEGLRRLGLAAKECIAFEDSFSGLASAVAAGIPTVAV 261          
BLAST of mRNA_L-elsbetiae_contig2048.6171.1 vs. uniprot
Match: A0A6U0VYW9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0VYW9_9STRA)

HSP 1 Score: 157 bits (397), Expect = 9.110e-39
Identity = 88/182 (48.35%), Postives = 115/182 (63.19%), Query Frame = 1
Query:  487 ITREYYDDWMSGNSNTAIVEKLFPEMPTDDQTALWKSKEEVYR-LISTKMTPLPGLLAFLDRCRSRGLAMILVTNAPRLDAVHTLEVLNLSDRFSETMVIGYECARSKPHPDPYLEGLSRIGLSADACVAFEDSVNGVSSAVSAGLYTFGV-GEGSQQRLEGAIGGGICVSDYLDSRLPEAL 1026
            ITRE+YD  MSG SN  IV K+ P++  + Q  +W  KEE YR L S  M    GL AFL  C S  L  I+VTNAPR DA+HTL +L L  RF++ +VIG EC  +KP P+PYLEGL ++GLSA  C+AFEDS +G  SA++A L T  V    S++ +    G  + V  + D+RL E+L
Sbjct:  196 ITREFYDKEMSGQSNEIIVPKVLPDLSPEQQRQVWVQKEEEYRRLTSDSMQRFEGLDAFLQWCDSNSLKTIVVTNAPREDAMHTLTMLGLFGRFAKHVVIGMECKEAKPSPEPYLEGLRKLGLSASQCIAFEDSPSGAKSAIAAQLRTVAVLSSRSEEEMVATHGCVMGVRRFDDARLLESL 377          
BLAST of mRNA_L-elsbetiae_contig2048.6171.1 vs. uniprot
Match: A4RS77_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4RS77_OSTLU)

HSP 1 Score: 144 bits (362), Expect = 2.350e-35
Identity = 80/188 (42.55%), Postives = 114/188 (60.64%), Query Frame = 1
Query:  484 PITREYYDDWMSGNSNTAIVEKLFPEMPTDDQTALWKSKEEVYR--LISTKMTPLPGLLAFLDRCRSRGLAMILVTNAPRLDAVHTLEVLNLSDRFS-ETMVIGYECARSKPHPDPYLEGLSRIGLS--ADACVAFEDSVNGVSSAVSAGLYTFGVGEGSQQRLEGAIGGGICVSDYLDSRLPEALGL 1032
            P+T EY+ + ++G SN  I  +L+P+   ++  A+ ++KE  +R  L    + P  GL A LD C +RG+  ++VTNAPR +A   L  L L + F  E +VIG ECARSKP+PDPYLEGL R G+S   +ACVAFEDS  G  +AV+A + T G+     +     +G  +CV D+    L EALG+
Sbjct:   60 PLTHEYFKENIAGGSNADIFARLYPDKSAEEHEAMAEAKEASFREALAREALQPAKGLRALLDACDARGVKTVVVTNAPRANAEAMLTQLGLREYFGDERLVIGTECARSKPNPDPYLEGLRRCGVSDAPEACVAFEDSPAGARAAVAANIPTVGILSSQSEETLARVGCCMCVDDFASPVLLEALGM 247          
BLAST of mRNA_L-elsbetiae_contig2048.6171.1 vs. uniprot
Match: A0A1X6NWD3_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NWD3_PORUM)

HSP 1 Score: 142 bits (358), Expect = 2.180e-34
Identity = 77/194 (39.69%), Postives = 112/194 (57.73%), Query Frame = 1
Query:  454 QVTPSFNGGEPITREYYDDWMSGNSNTAIVEKLFPEMPTDDQTALWKSKEEVY-RLISTKMTPLPGLLAFLDRCRSRGLAMILVTNAPRLDAVHTLEVLNLSDRFSETMVIGYECARSKPHPDPYLEGLSRIGLSADACVAFEDSVNGVSSAVSAGLYTFGVGEGSQQRLEGAIGGGICVSDYLDSRLPEALGL 1032
            ++ P FNGG+ ITRE+Y+  MSG  N  +++++ P++  +    +  +KE  Y R  +  +  L G  A LD   + G+ + +VTNAPR    HTL    L DRF   +++G ECAR+KP PDPY++G   + +     +AFEDS +G++SAV+AGL T GVG G       A G    + DY D RL   LGL
Sbjct:   76 EMEPQFNGGKRITREFYNTRMSGRQNPVLLKEIMPDVSPERGVVIADTKERAYMRRTAGAIEALAGAAALLDVLAAAGVRLGVVTNAPREIMEHTLGEAALRDRFP-VVIVGDECARAKPFPDPYVDGCRALDVQPREAIAFEDSPSGITSAVAAGLLTIGVGTGHPPATLLAAGAAFVIHDYYDERLATVLGL 268          
BLAST of mRNA_L-elsbetiae_contig2048.6171.1 vs. uniprot
Match: C1FHX1_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FHX1_MICCC)

HSP 1 Score: 140 bits (353), Expect = 5.050e-34
Identity = 78/187 (41.71%), Postives = 113/187 (60.43%), Query Frame = 1
Query:  472 NGGEPITREYYDDWMSGNSNTAIVEKLFPEMPTDDQTALWKSKEEVYR-LISTKMTPLPGLLAFLDRCRSRGLAMILVTNAPRLDAVHTLEVLNLSDRFSETMVIGYECARSKPHPDPYLEGLSRIG-LSADACVAFEDSVNGVSSAVSAGLYTFGVGEGSQQRLEGAIGGGICVSDYLDSRLPEAL 1026
            NGG PI  +++   ++G +N  I   L+PE+   ++ A+W+ KEE +R L +TK+  LPGL   L    +RG+  + VTNAPR +A   L  L L D + E +VIG EC ++KPHPDPYLEG+  +G + A  CVAFEDS  G ++AV+AG+ T GV           +G  +CV ++ + RL  AL
Sbjct:   58 NGGVPIDDDFFHKHIAGRTNEDIFADLWPELSVPEREAMWEKKEEDFRALAATKLRRLPGLTELLAWIDARGIRKVAVTNAPRPNAELMLTSLGL-DGYFEHVVIGTECTKAKPHPDPYLEGMRLVGAVDASRCVAFEDSPAGAAAAVAAGIPTVGVTTSQPSSALEGVGVSLCVKNFAEERLMLAL 243          
BLAST of mRNA_L-elsbetiae_contig2048.6171.1 vs. uniprot
Match: A0A3G7TUA9_9PSED (Beta-phosphoglucomutase n=29 Tax=Pseudomonas TaxID=286 RepID=A0A3G7TUA9_9PSED)

HSP 1 Score: 137 bits (345), Expect = 2.540e-33
Identity = 76/198 (38.38%), Postives = 115/198 (58.08%), Query Frame = 1
Query:  421 DLTRLYCRCRQQVTPSFNGGEPITREYYDDWMSGNSNTAIVEKLFPEMPTDDQTALWKSKEEVYRLISTKMTPLPGLLAFLDRCRSRGLAMILVTNAPRLDAVHTLEVLNLSDRFSETMVIGYECARSKPHPDPYLEGLSRIGLSADACVAFEDSVNGVSSAVSAGLYTFGVGEGSQQRLEGAIGGGICVSDYLDSRL 1014
            D  +L+    QQ+    +G    T + ++  +SG +N  +   LFP+    +  A    KE  +R +S ++TP+PGLL  LD  R RG+ M +VTNAPR +A H L VL L DRF +++++  E  R+KP P PYL GL  +G SA+A +AFEDS+ G+++AV AG++T G+          A G  + V D+ D +L
Sbjct:   15 DTDQLHLLALQQLLLEEDG-RVFTHQEFEAHVSGQANANMCRYLFPQRSVAEHEAFADRKEARFRQLSPRLTPMPGLLRLLDFARERGIGMCVVTNAPRANAEHMLAVLGLGDRF-DSVLVAEELPRAKPDPLPYLTGLECLGASAEAGIAFEDSIPGLTAAVGAGIFTIGLATSQSPEALLAAGAHLVVEDFNDPQL 210          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2048.6171.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCU9_9PHAE3.370e-10886.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LK30_ECTSI2.520e-10683.94Haloacid dehalogenase-like hydrolase family protei... [more]
A0A835ZE39_9STRA7.560e-6152.53HAD-like domain-containing protein n=1 Tax=Tribone... [more]
A0A2V3J516_9FLOR3.110e-4241.15Haloacid dehalogenase-like hydrolase domain-contai... [more]
W7TRE2_9STRA8.510e-4046.91Had family hydrolase n=2 Tax=Monodopsidaceae TaxID... [more]
A0A6U0VYW9_9STRA9.110e-3948.35Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A4RS77_OSTLU2.350e-3542.55Uncharacterized protein n=1 Tax=Ostreococcus lucim... [more]
A0A1X6NWD3_PORUM2.180e-3439.69Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
C1FHX1_MICCC5.050e-3441.71Uncharacterized protein n=1 Tax=Micromonas commoda... [more]
A0A3G7TUA9_9PSED2.540e-3338.38Beta-phosphoglucomutase n=29 Tax=Pseudomonas TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2048contigL-elsbetiae_contig2048:17822..20525 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score328.9
Seed ortholog evalue2e-87
Seed eggNOG ortholog2880.D8LK30
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0003850,GO:0004346,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0042578,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0050308,GO:0050309,GO:0071944
EggNOG free text desc.pseudouridine 5'-phosphatase activity
EggNOG OGsCOG0637@1,KOG2914@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionhaloacid dehalogenase-like hydrolase family protein
Ec32 orthologEc-06_007970.1
Exons3
Model size1984
Cds size747
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2048.6171.1prot_L-elsbetiae_contig2048.6171.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig2048 18756..20222 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815844.5294657-UTR-L-elsbetiae_contig2048:17821..187551622815844.5294657-UTR-L-elsbetiae_contig2048:17821..18755Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2048 17822..18755 -
1691683141.0924695-UTR-L-elsbetiae_contig2048:17821..187551691683141.0924695-UTR-L-elsbetiae_contig2048:17821..18755Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2048 17822..18755 -
1622815844.5832238-UTR-L-elsbetiae_contig2048:20222..205251622815844.5832238-UTR-L-elsbetiae_contig2048:20222..20525Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2048 20223..20525 -
1691683141.1440482-UTR-L-elsbetiae_contig2048:20222..205251691683141.1440482-UTR-L-elsbetiae_contig2048:20222..20525Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2048 20223..20525 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815844.5441074-CDS-L-elsbetiae_contig2048:18755..190441622815844.5441074-CDS-L-elsbetiae_contig2048:18755..19044Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2048 18756..19044 -
1691683141.1085675-CDS-L-elsbetiae_contig2048:18755..190441691683141.1085675-CDS-L-elsbetiae_contig2048:18755..19044Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2048 18756..19044 -
1622815844.5569162-CDS-L-elsbetiae_contig2048:19511..197311622815844.5569162-CDS-L-elsbetiae_contig2048:19511..19731Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2048 19512..19731 -
1691683141.1238706-CDS-L-elsbetiae_contig2048:19511..197311691683141.1238706-CDS-L-elsbetiae_contig2048:19511..19731Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2048 19512..19731 -
1622815844.570887-CDS-L-elsbetiae_contig2048:19984..202221622815844.570887-CDS-L-elsbetiae_contig2048:19984..20222Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2048 19985..20222 -
1691683141.1328237-CDS-L-elsbetiae_contig2048:19984..202221691683141.1328237-CDS-L-elsbetiae_contig2048:19984..20222Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2048 19985..20222 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig2048.6171.1

>prot_L-elsbetiae_contig2048.6171.1 ID=prot_L-elsbetiae_contig2048.6171.1|Name=mRNA_L-elsbetiae_contig2048.6171.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=249bp
MYDIFAQLCLYWRFYRNLWTMCVMNSAHLRNVHNRRESCDLTRLYCRCRQ
QVTPSFNGGEPITREYYDDWMSGNSNTAIVEKLFPEMPTDDQTALWKSKE
EVYRLISTKMTPLPGLLAFLDRCRSRGLAMILVTNAPRLDAVHTLEVLNL
SDRFSETMVIGYECARSKPHPDPYLEGLSRIGLSADACVAFEDSVNGVSS
AVSAGLYTFGVGEGSQQRLEGAIGGGICVSDYLDSRLPEALGLGADTS*
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mRNA from alignment at L-elsbetiae_contig2048:17822..20525-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig2048.6171.1 ID=mRNA_L-elsbetiae_contig2048.6171.1|Name=mRNA_L-elsbetiae_contig2048.6171.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2704bp|location=Sequence derived from alignment at L-elsbetiae_contig2048:17822..20525- (Laminarionema elsbetiae ELsaHSoW15)
GCGCCCACGGTGCGTGTGGTCGGGGCTCCGACGTTGGGATTTGACGCTCT TGAGGGTATGAGATACCGCAAAGTGCCCCTGTATCGGATGTTGCTCGATA TAAATAGCGGCATTGAATGCCGCTATATCGGGTTGGAAGGAAATTGGGGC AAGATATTTTGATGAAGCTATATTTATTTATCGGCAATTCCGCTCAACCG GTTGCTGCTAAACAGGGCCACCTACTGCTGTAATTTGAGAGTTACTGCTT TAGAGTTGTCCCGGCGAAACCATGCTCTGGCCAACACGCCAAAACGCCAG CATATGTACGACATTTTTGCTCAATTGTGTTTATATTGGAGATTTTATCG AAATCTCTGGACTATGTGCGTGATGAACTCTGCTCATCTACGAAATGTAC ACAACAGACGCGAGAGTTGCGACCTAACGAGATTGTACTGCCGTTGCCGT CAGCAGGTGACGCCGAGTTTCAACGGAGGGGAACCCATCACAAGAGAATA CTATGACGACTGGATGAGTGGAAACAGCAACACAGCCATTGGTGAGCTTG CCGCTGTACACGGTAGTTTCGTATGCTTTTTCGCGCTTTTTGCACCGTTC TTTCAAGCAAGCCGCGGGTTATCCTTTGTGTGTATCTATCTGTCATCGCT ACACTGCTGTCCCCCGCCCCGTTGTGCCGGACACGACCGTCATAAAAAAA ACTCTGGAACGCAACGGAAAAATGAGCTCTTCCTATGACACGGTTATCGA CCAACCCGCCTTCGCCTTGTCCCTTTCCCTCGTTTTTTGCGTAGTCGAAA AGCTTTTCCCGGAGATGCCGACGGACGATCAAACCGCCCTGTGGAAGTCC AAGGAGGAGGTGTATCGGCTTATCTCAACCAAGATGACACCTCTACCGGG GCTGCTAGCCTTCCTCGATCGCTGCAGATCCCGTGGGCTGGCCATGATTC TCGTCACGAACGCGCCGAGATTAGACGCCGTGCACACGCTCGAGGTGCTG AACCTCTCTGACCGGTACGGAGGGCGTGTGGGGTATGTTGCACATTAGTA GTAATGTTGAGCGATGAAGACCCGTGGATCATGTAGAGTACAGGACGCCC AGTAAGAAACAATTGTGAGGCAGCAAGGCTCAGTTTCTGAGCAAGATTGC ACTCTCGCAGTCTTCGGTATCCACATGCCGCGATTTCGACGCCGGCTGCA GCCTCAAGCGCTGCCCCTCGGGTAGTGCTTTCGAATCAGGTTTCTCTTCC AACAGGAACCTGTTTGTCGGTGCTTCTTGCTGTTGACGGCGCGCTTGCTG TTTGTTGACGCTCGTGATGTCGAGTGTGGTTGTACCTGCTTCTACTCTCT CTAGTCAAACGTCATCGCGCTTTTTCTTGCTCTCTTCTCCACACTGTTTA TCGAGGCGGCGTGTATCAGCTTGTGCCATCCGGGAAAACCAGCTGCCCCA CGTACGTGCTTCCCCTTTTTTTGGTGCATAGGTTCAGCGAGACGATGGTC ATTGGCTATGAATGCGCGCGATCCAAGCCCCATCCGGACCCTTACCTAGA GGGACTGTCGAGGATCGGCCTCTCCGCCGATGCGTGCGTCGCCTTCGAGG ACAGCGTCAACGGTGTCTCCTCTGCGGTGTCCGCCGGGTTGTACACCTTC GGTGTTGGGGAGGGTTCCCAGCAGAGGTTGGAGGGGGCCATCGGCGGTGG TATTTGTGTGTCGGACTACTTGGATAGCCGACTTCCCGAAGCGCTTGGGC TTGGTGCCGACACATCATGAACAAAAGGAGGCGAGGTTCCAGTTTGTGGA AGCTGGTGTATTGAAGTGCATACAACAAGGGGAACCGAAGGATGTGGCCA GTCGTGTGTAGCTGTTTTCTACTTGCCGGTTTGGTGTTTTAACAGCTCTT GTTGTCGAAAGACGATCAAGTTGTCATTTTTTGTACTCCTTCAAGATGGT TGTTCGCATCGTTTTGGTGCCCAAACGCTACAAATATTCGGAGATATTCG GAGATAAGTCAGATGCAAACTGGTTTGCTGAGGTTCAACTCAGGGTTGGT TTGATCGAAGCATATCATTGTGGGGGGGGGGGGGTAGTTAAGCGTGCTGC ACCTTAGAGCTCCCAGAGCAGAAAGTTCGGCCGTTCGCGCAGAGATAGCC GCCCGTGCTACATCGAGAGCAGATATTGAGAGGACGTGCAAGTGTCCTTC CGAGTGAATTGACGTCCAGAGGACAGGCCACCTCAGACGAAGGTCGGGGT TTTTCGTGGCGAGTAAAACATTTAAGAATAGTGCCTTTTACATGTACGTT TGCGTTCGTTCTCAGTCTCTCCAACAGGGGGGATTGGGAGTTGTAACAAG GGGAACATGGAAGCAGTCGAGTTTTTTGTTTGCATTAAATAGGCTGAGAG TCCAGTCCCGTTTTATGCGGCAGTGCAGATGGCACGAATGAGAAATAACA CGACTGGTATATGATCTCTGTAACCCAAATTGCCTGGATGATTGCTTCGC CCGGCTGCTGTGTGTATATATTCGCGCGGTCAATAGATAATGGGTTCGGC GTGTGGTTTAGATTTTTCTAGCGATTGCAATTCTGCAGCAAACAGCAAAC AGCCGTGAACACCTAAACTGTTGGACGAACAACTCTATGCGAGCATCCCG AAGCTTACATACAACTCGCCAACACGGCGCTATCACGTCCGATCCTGGTG GCTG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig2048:17822..20525-

>mRNA_L-elsbetiae_contig2048.6171.1 ID=mRNA_L-elsbetiae_contig2048.6171.1|Name=mRNA_L-elsbetiae_contig2048.6171.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1494bp|location=Sequence derived from alignment at L-elsbetiae_contig2048:17822..20525- (Laminarionema elsbetiae ELsaHSoW15)
ATGTACGACATTTTTGCTCAATTGTGTTTATATTGGAGATTTTATCGAAA
TCTCTGGACTATGTGCGTGATGAACTCTGCTCATCTACGAAATGTACACA
ACAGACGCGAGAGTTGCGACCTAACGAGATTGTACTGCCGTTGCCGTCAG
CAGGTGACGCCGAGTTTCAACGGAGGGGAACCCATCACAAGAGAATACTA
TGACGACTGGATGAGTGGAAACAGCAACACAGCCATTGATGTACGACATT
TTTGCTCAATTGTGTTTATATTGGAGATTTTATCGAAATCTCTGGACTAT
GTGCGTGATGAACTCTGCTCATCTACGAAATGTACACAACAGACGCGAGA
GTTGCGACCTAACGAGATTGTACTGCCGTTGCCGTCAGCAGGTGACGCCG
AGTTTCAACGGAGGGGAACCCATCACAAGAGAATACTATGACGACTGGAT
GAGTGGAAACAGCAACACAGCCATTGTCGAAAAGCTTTTCCCGGAGATGC
CGACGGACGATCAAACCGCCCTGTGGAAGTCCAAGGAGGAGGTGTATCGG
CTTATCTCAACCAAGATGACACCTCTACCGGGGCTGCTAGCCTTCCTCGA
TCGCTGCAGATCCCGTGGGCTGGCCATGATTCTCGTCACGAACGCGCCGA
GATTAGACGCCGTGCACACGCTCGAGGTGCTGAACCTCTCTGACCGTCGA
AAAGCTTTTCCCGGAGATGCCGACGGACGATCAAACCGCCCTGTGGAAGT
CCAAGGAGGAGGTGTATCGGCTTATCTCAACCAAGATGACACCTCTACCG
GGGCTGCTAGCCTTCCTCGATCGCTGCAGATCCCGTGGGCTGGCCATGAT
TCTCGTCACGAACGCGCCGAGATTAGACGCCGTGCACACGCTCGAGGTGC
TGAACCTCTCTGACCGGTTCAGCGAGACGATGGTCATTGGCTATGAATGC
GCGCGATCCAAGCCCCATCCGGACCCTTACCTAGAGGGACTGTCGAGGAT
CGGCCTCTCCGCCGATGCGTGCGTCGCCTTCGAGGACAGCGTCAACGGTG
TCTCCTCTGCGGTGTCCGCCGGGTTGTACACCTTCGGTGTTGGGGAGGGT
TCCCAGCAGAGGTTGGAGGGGGCCATCGGCGGTGGTATTTGTGTGTCGGA
CTACTTGGATAGCCGACTTCCCGAAGCGCTTGGGCTTGGTGCCGACACAT
CATGAGTTCAGCGAGACGATGGTCATTGGCTATGAATGCGCGCGATCCAA
GCCCCATCCGGACCCTTACCTAGAGGGACTGTCGAGGATCGGCCTCTCCG
CCGATGCGTGCGTCGCCTTCGAGGACAGCGTCAACGGTGTCTCCTCTGCG
GTGTCCGCCGGGTTGTACACCTTCGGTGTTGGGGAGGGTTCCCAGCAGAG
GTTGGAGGGGGCCATCGGCGGTGGTATTTGTGTGTCGGACTACTTGGATA
GCCGACTTCCCGAAGCGCTTGGGCTTGGTGCCGACACATCATGA
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