mRNA_L-elsbetiae_contig2045.6160.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig2045.6160.1
Unique NamemRNA_L-elsbetiae_contig2045.6160.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig2045.6160.1 vs. uniprot
Match: D8LU47_ECTSI (T-complex protein 1 subunit gamma n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU47_ECTSI)

HSP 1 Score: 946 bits (2446), Expect = 0.000e+0
Identity = 479/490 (97.76%), Postives = 486/490 (99.18%), Query Frame = 1 
Query:    1 RSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLSVAEPILTRSVHPTQIVMGYARALQTALEACDALAETIDVDNGPQLKKLVDAAVGTKFSHRWGDKLVMMAIQAVKRVRTVVDGRVEVDVKRYARVEKIPGGEMEDCMVMDGVMFNKDVTHSKMRRKIENPRVLLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEVRKIGDEYFSFLEGCKDAKACTVLLRGGSKDVLNEVERNLADAMQVVRNVVFEPRLLPGGGATEMAVSQALSKKAQEVEGVQQWAFKAAAAALEVIPRTLAQNCGANVVRVLTQLRAKHANEAKCTWGIDGTTGVMTDMKDLGIWEPYTVKTQTYKTAVEAACMILRIDDIVSGIKHGQKQG 1470
            RSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLSVAEPILTR VHPTQIVMGYARALQTAL+ACDALAETIDVDNGPQLKKLVDAAVGTKFSHRWGDKLV MAI AVKRVRTVVDGRVEVDVKRYARVEKIPGGEMEDC V+DGVMFNKDVTHSKMRR+IENPRVLLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEVRKIGDEYF+FLEGCKDAKACTVLLRGGSKDVLNEVERNLADAMQVVRNVVFEPRLLPGGGATEMAVSQALSKKAQEVEGVQQWAFKAAA+ALEVIPRTLAQNCGANVVRVLTQLRAKHANEAKCTWGIDGTTGVMTDM+DLGIWEP+TVKTQTYKTAVEAACMILRIDDIVSGIKHGQKQG
Sbjct:   42 RSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLSVAEPILTRGVHPTQIVMGYARALQTALDACDALAETIDVDNGPQLKKLVDAAVGTKFSHRWGDKLVSMAIDAVKRVRTVVDGRVEVDVKRYARVEKIPGGEMEDCTVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEVRKIGDEYFTFLEGCKDAKACTVLLRGGSKDVLNEVERNLADAMQVVRNVVFEPRLLPGGGATEMAVSQALSKKAQEVEGVQQWAFKAAASALEVIPRTLAQNCGANVVRVLTQLRAKHANEAKCTWGIDGTTGVMTDMRDLGIWEPFTVKTQTYKTAVEAACMILRIDDIVSGIKHGQKQG 531
[Close]
BLAST of mRNA_L-elsbetiae_contig2045.6160.1 vs. uniprot
Match: A0A836CR16_9STRA (T-complex protein 1 subunit gamma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CR16_9STRA)

HSP 1 Score: 766 bits (1977), Expect = 3.730e-272
Identity = 385/501 (76.85%), Postives = 429/501 (85.63%), Query Frame = 1 
Query:    1 RSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLSVAEPILTRSVHPTQIVMGYARALQTALEACDALAETIDVDNGPQLKKLVDAAVGTKFSHRWGDKLVMMAIQAVKRVRTVVDGRVEVDVKRYARVEKIPGGEMEDCMVMDGVMFNKDVTHSKMRRKIENPRVLLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEVRKIGDEYFSFLEGCKDAKACTVLLRGGSKDVLNEVERNLADAMQVVRNVVFEPRLLPGGGATEMAVSQALSKKAQEVEGVQQWAFKAAAAALEVIPRTLAQNCGANVVRVLTQLRAKHANEAKC-----------------TWGIDGTTGVMTDMKDLGIWEPYTVKTQTYKTAVEAACMILRIDDIVSGIK 1452
            RSMLKMLLDPMGGIVITNDGNCILREVDV+HPAAKSMIELSRAQDEEVGDGTTSVIIL GEML+ AEP+L + +HPTQIV GYA ALQ ALE C A+++ +D+ +   LK+LV+AAVGTKFSHRWGD LV MAI AV +V   VDGR EVDVKRY RVEK+PGGE++ C V+DGVMFNKDVTH++MRR+IE+PR+LLLDCPLEYKKGES TNVEVT+E+DWNTLLRMEEEY+ENICAQIVAF PDIVITEKGVSDLAQHY MKA+IT FRRLRK+DNNR+ARAVGAT+VSRPDEIQESDIGTGCGLFEVRKIGDEYF+FLE CKD KACTVLLRGGSKDVLNEVERNL DAMQVVRNVVFEPRLLPGGGATEMAV+ AL++ A+  +G Q+W   A A A E IPRTLAQNCGA+VVR LTQLRAKHA  A                   TWGI+G TG + DM  LG+WEPY+VK QTYKTA+EAACMILRIDDIVSG+K
Sbjct:   43 RSMLKMLLDPMGGIVITNDGNCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILAGEMLAAAEPLLLQHLHPTQIVRGYAHALQVALETCTAVSKVVDLKDRAALKELVEAAVGTKFSHRWGDILVGMAIDAVTKVVCDVDGRTEVDVKRYVRVEKVPGGELDQCRVLDGVMFNKDVTHARMRRRIESPRILLLDCPLEYKKGESATNVEVTQEDDWNTLLRMEEEYVENICAQIVAFKPDIVITEKGVSDLAQHYFMKANITCFRRLRKSDNNRVARAVGATIVSRPDEIQESDIGTGCGLFEVRKIGDEYFAFLEQCKDPKACTVLLRGGSKDVLNEVERNLQDAMQVVRNVVFEPRLLPGGGATEMAVAAALTRAAEAADGAQRWPVAAVAGAFEAIPRTLAQNCGASVVRTLTQLRAKHAAPAAXXXXXXXXXXXXXAHTGVTWGINGVTGELADMDTLGVWEPYSVKVQTYKTAIEAACMILRIDDIVSGVK 543
[Close]
BLAST of mRNA_L-elsbetiae_contig2045.6160.1 vs. uniprot
Match: A0A7S2SP58_9STRA (T-complex protein 1 subunit gamma n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SP58_9STRA)

HSP 1 Score: 749 bits (1934), Expect = 7.300e-266
Identity = 370/489 (75.66%), Postives = 426/489 (87.12%), Query Frame = 1 
Query:    1 RSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLSVAEPILTRSVHPTQIVMGYARALQTALEACDALAETIDVDNGPQLKKLVDAAVGTKFSHRWGDKLVMMAIQAVKRV--RTVVDGRVEVDVKRYARVEKIPGGEMEDCMVMDGVMFNKDVTHSKMRRKIENPRVLLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEVRKIGDEYFSFLEGCKDAKACTVLLRGGSKDVLNEVERNLADAMQVVRNVVFEPRLLPGGGATEMAVSQALSKKA-QEVEGVQQWAFKAAAAALEVIPRTLAQNCGANVVRVLTQLRAKHANEAKCTWGIDGTTGVMTDMKDLGIWEPYTVKTQTYKTAVEAACMILRIDDIVSGIKHG 1458
            RSMLKMLLDPMGGIV+TNDGNCILREVDV+HPAAKSMIELSRAQDEEVGDGTTSVI+LTGE L +AEP + R+VHPT IV G+ RALQ +LE C  +A  +D+++  Q+  +V +++GTKFS RWG +++ MA+ AV RV       G+ EVD+KRY + EK+PGGE+ DC V+DGVMFNKDVTH+KMRR+IENPR+LLLDCPLEYKKGESQTNVE+TKEEDW+TLLRMEEEYIEN+CAQIVA  PDIVITEKGVSDLAQHYL+KA+ITAFRRLRKTDNNR+ARA GAT+VSRPDEIQESD+GTGCGLFEV+KIGDEYF+FL  C+D KACTVLLRGGSKDVLNE+ERNL+DAMQV+RNVVFEP LLPGGGATEMAV QAL++ A  +VEGVQQW F A   ALEVIPRTLAQNCGANVVRV+TQLRAKH +    TWGIDG TG + DMKD+G+WEPY VK QT KT++EAACMILRIDDIVSG+K G
Sbjct:   42 RSMLKMLLDPMGGIVMTNDGNCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIVLTGETLLLAEPFIVRNVHPTVIVSGFTRALQHSLEVCKRVAVKVDLEDRAQMMSIVQSSIGTKFSARWGAQMIDMALTAVLRVVHEDGGSGQKEVDIKRYVKTEKLPGGELSDCQVLDGVMFNKDVTHAKMRRRIENPRILLLDCPLEYKKGESQTNVEITKEEDWDTLLRMEEEYIENLCAQIVAVRPDIVITEKGVSDLAQHYLLKANITAFRRLRKTDNNRVARACGATIVSRPDEIQESDVGTGCGLFEVKKIGDEYFTFLTQCQDPKACTVLLRGGSKDVLNEIERNLSDAMQVIRNVVFEPLLLPGGGATEMAVGQALARDAASKVEGVQQWPFAAIGKALEVIPRTLAQNCGANVVRVMTQLRAKHTSLDSSTWGIDGATGKLADMKDMGLWEPYNVKVQTLKTSIEAACMILRIDDIVSGMKKG 530
[Close]
BLAST of mRNA_L-elsbetiae_contig2045.6160.1 vs. uniprot
Match: A0A7S2FP00_9STRA (T-complex protein 1 subunit gamma n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FP00_9STRA)

HSP 1 Score: 746 bits (1925), Expect = 4.900e-264
Identity = 367/487 (75.36%), Postives = 425/487 (87.27%), Query Frame = 1 
Query:    1 RSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLSVAEPILTRSVHPTQIVMGYARALQTALEACDALAETIDVDNGPQLKKLVDAAVGTKFSHRWGDKLVMMAIQAVKRV-RTVVDGRVEVDVKRYARVEKIPGGEMEDCMVMDGVMFNKDVTHSKMRRKIENPRVLLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEVRKIGDEYFSFLEGCKDAKACTVLLRGGSKDVLNEVERNLADAMQVVRNVVFEPRLLPGGGATEMAVSQALSKKAQEVEGVQQWAFKAAAAALEVIPRTLAQNCGANVVRVLTQLRAKHANEAKCTWGIDGTTGVMTDMKDLGIWEPYTVKTQTYKTAVEAACMILRIDDIVSGIKHG 1458
            RSMLKMLLDPMGGIV+TNDGNCILREVDV+HPAAKSMIELSRAQDEEVGDGTTSVIIL+GE+L +AEP L R++HPT IV GY +ALQ AL  C  +A  +D+D+  Q+  +V + +GTKFS R+GD++V +A+ AV++V +   DG+ EVD+KRY + EKIPGGE+ DC V++GVMFNKDVTH+KMRR+IENPRVLLLDCPLEYKKGESQTNVE+TKEEDW+TLLRMEEEYIEN+CAQIVA  PDIVITEKGVSDLAQHYL+KA+ITAFRRLRKTDNNR+ARA GAT+VSRPDEIQESD+GTGCGLFEVRKIGDEYF F+E C D KACTVLLRGGSKDVLNE+ERNL DAMQV+RNVVFEP LLPGGGATEMAV QAL++ +  +EGV+QW + AA  ALEVIPRTLA+NCGANV+RV+TQLR KH      TWGIDGTTG + DM+DLG+WEP+ VK QT KTA+EAACMILRIDDIVSG+  G
Sbjct:   71 RSMLKMLLDPMGGIVMTNDGNCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILSGEILCLAEPFLMRNIHPTVIVSGYNKALQEALVVCKQMAVPVDLDDTKQMTDIVRSTIGTKFSSRFGDQMVNLALTAVRKVVKEGADGKKEVDIKRYVKTEKIPGGELSDCCVLNGVMFNKDVTHAKMRRRIENPRVLLLDCPLEYKKGESQTNVEITKEEDWDTLLRMEEEYIENMCAQIVAVKPDIVITEKGVSDLAQHYLLKANITAFRRLRKTDNNRVARATGATIVSRPDEIQESDVGTGCGLFEVRKIGDEYFVFMEECADPKACTVLLRGGSKDVLNEIERNLGDAMQVIRNVVFEPLLLPGGGATEMAVGQALARSSVGLEGVEQWPYVAAGKALEVIPRTLAENCGANVIRVMTQLRTKHLTLDNATWGIDGTTGKLADMQDLGLWEPFVVKVQTLKTAMEAACMILRIDDIVSGMAKG 557
[Close]
BLAST of mRNA_L-elsbetiae_contig2045.6160.1 vs. uniprot
Match: W7TWK9_9STRA (T-complex protein 1 subunit gamma n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWK9_9STRA)

HSP 1 Score: 729 bits (1883), Expect = 4.690e-258
Identity = 366/491 (74.54%), Postives = 421/491 (85.74%), Query Frame = 1 
Query:    1 RSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLSVAEPILTRSVHPTQIVMGYARALQTALEACDALAETIDVDNGPQLKKLVDAAVGTKFSHRWGDKLVMMAIQAVKRVRTVVDGR-------VEVDVKRYARVEKIPGGEMEDCMVMDGVMFNKDVTHSKMRRKIENPRVLLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEVRKIGDEYFSFLEGCKDAKACTVLLRGGSKDVLNEVERNLADAMQVVRNVVFEPRLLPGGGATEMAVSQALSKKAQEVEGVQQWAFKAAAAALEVIPRTLAQNCGANVVRVLTQLRAKHANEAKCTWGIDGTTGVMTDMKDLGIWEPYTVKTQTYKTAVEAACMILRIDDIVSGIK 1452
            R+MLKMLLDPMGGIVITNDG+CILREVDV+HPAAKSMIELSRAQDEEVGDGTTSVIIL GEML+ AEP L R++HPTQIV GY++ALQ AL+ C+ALA+ IDV++   L ++V A VGTKFS RWG  +V +A+ +V +V   V G         E DVKRY RVEKIPGGE+ D  V+DGVMFNKDVTHSKMRR+IE PR+LLLDCPLEYKKGESQTNVEV +EEDWNTLLRMEEE+IE +CA+IVAF PDIVITEKGVSDLAQHYL+KA +TAFRR+RK+DNNRIARAVGA +VSRPDEIQE D+GTGCGLFEVRKIGDEYF+FLE C+  +ACTVLLRGGSKDVLNEVERNL DA+QVVRN+VFE +LLPGGGATEMAV QAL++ + EVEGVQQW +KA   ALEVIPRTLAQNCG NV+R++TQLRAKHA +   TWGIDG  G++  M+ LG+WEPY VK QT KTAVEAACM+LRIDD+VSG+K
Sbjct:   43 RAMLKMLLDPMGGIVITNDGHCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILAGEMLAQAEPFLHRNIHPTQIVAGYSKALQEALKVCNALAKPIDVNDKQALSQIVSACVGTKFSSRWGPFMVDLAVDSVLKVVRQVGGEGGAEGGYKECDVKRYVRVEKIPGGELGDSKVIDGVMFNKDVTHSKMRRRIEKPRILLLDCPLEYKKGESQTNVEVKQEEDWNTLLRMEEEFIEKMCAEIVAFRPDIVITEKGVSDLAQHYLLKAGVTAFRRVRKSDNNRIARAVGAVIVSRPDEIQEGDVGTGCGLFEVRKIGDEYFAFLEQCEQPQACTVLLRGGSKDVLNEVERNLQDALQVVRNLVFESKLLPGGGATEMAVGQALARASTEVEGVQQWPYKAVGEALEVIPRTLAQNCGTNVLRIMTQLRAKHA-QGPTTWGIDGEKGILVPMETLGVWEPYAVKVQTIKTAVEAACMLLRIDDVVSGMK 532
[Close]
BLAST of mRNA_L-elsbetiae_contig2045.6160.1 vs. uniprot
Match: A0A6S9KVF4_HETAK (T-complex protein 1 subunit gamma n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KVF4_HETAK)

HSP 1 Score: 728 bits (1880), Expect = 1.040e-257
Identity = 358/484 (73.97%), Postives = 411/484 (84.92%), Query Frame = 1 
Query:    1 RSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLSVAEPILTRSVHPTQIVMGYARALQTALEACDALAETIDVDNGPQLKKLVDAAVGTKFSHRWGDKLVMMAIQAVKRVRTVVDGRVEVDVKRYARVEKIPGGEMEDCMVMDGVMFNKDVTHSKMRRKIENPRVLLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEVRKIGDEYFSFLEGCKDAKACTVLLRGGSKDVLNEVERNLADAMQVVRNVVFEPRLLPGGGATEMAVSQALSKKAQEVEGVQQWAFKAAAAALEVIPRTLAQNCGANVVRVLTQLRAKHANEAKCTWGIDGTTGVMTDMKDLGIWEPYTVKTQTYKTAVEAACMILRIDDIVSGIK 1452
            RSMLKMLLDPMGGIV+TNDGNCILRE+DV HPAAKSMIELSRAQDEEVGDGTTSVIIL GEML++AEP L++ +HPT IV GY RA+  AL+ C  +A  +DV++  Q+ +LV+A +GTKFS RW  KLV MAI AV +V    DGR EVD+KRY RVEKIPGGEM DC V+DGVMFNKD+TH KMR+ IENPRV+LLDC LEYKKGESQTNVE+TKEEDWNTLLRMEEEYIENICAQIVA  PD+VITEKGVSDLAQHY +KA ITAFRRLRK+DNNR+ARA GAT+VSR +E++E DIGTGCG FE+RK+GDE+F+F E C +AKACT+LLRGGSKDVLNEVERNL DAMQVVRN+V+EPRLLPGGGATEMAV+  L K A  VEG  ++ F A   ALEVIPRTLAQNCGANVVR LTQLRAKH +    TWG+DG TG + DM++ G+WEP+ VK QT+KTAVEA CM+LRIDDIVSG+K
Sbjct:   42 RSMLKMLLDPMGGIVMTNDGNCILREIDVTHPAAKSMIELSRAQDEEVGDGTTSVIILAGEMLALAEPFLSQDIHPTVIVQGYMRAMTLALDVCKEIAMDVDVNDRAQMTQLVEATLGTKFSSRWSSKLVGMAIDAVLKVVKDDDGRKEVDIKRYCRVEKIPGGEMGDCRVLDGVMFNKDITHPKMRKSIENPRVMLLDCSLEYKKGESQTNVEITKEEDWNTLLRMEEEYIENICAQIVALRPDVVITEKGVSDLAQHYFVKAGITAFRRLRKSDNNRVARATGATIVSRTEELREEDIGTGCGRFEMRKVGDEWFAFFEACAEAKACTLLLRGGSKDVLNEVERNLQDAMQVVRNIVYEPRLLPGGGATEMAVAYELGKAALAVEGPARFPFAAVGQALEVIPRTLAQNCGANVVRALTQLRAKHTDPGNRTWGVDGETGAVRDMREAGVWEPFAVKVQTFKTAVEAGCMVLRIDDIVSGMK 525
[Close]
BLAST of mRNA_L-elsbetiae_contig2045.6160.1 vs. uniprot
Match: A0A7R9U7E4_9STRA (T-complex protein 1 subunit gamma n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7E4_9STRA)

HSP 1 Score: 714 bits (1843), Expect = 1.270e-251
Identity = 350/484 (72.31%), Postives = 417/484 (86.16%), Query Frame = 1 
Query:    1 RSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLSVAEPILTRSVHPTQIVMGYARALQTALEACDALAETIDVDNGPQLKKLVDAAVGTKFSHRWGDKLVMMAIQAVKRVRTVVDGRVEVDVKRYARVEKIPGGEMEDCMVMDGVMFNKDVTHSKMRRKIENPRVLLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEVRKIGDEYFSFLEGCKDAKACTVLLRGGSKDVLNEVERNLADAMQVVRNVVFEPRLLPGGGATEMAVSQALSKKAQEVEGVQQWAFKAAAAALEVIPRTLAQNCGANVVRVLTQLRAKHANEAKCTWGIDGTTGVMTDMKDLGIWEPYTVKTQTYKTAVEAACMILRIDDIVSGIK 1452
            RSMLKMLLDPMGGIV+TNDG+ ILREVDV+HPAAKSMIELSRAQDEEVGDGTTSVIIL GEMLS+AEP L R++HPT +V GY RALQ AL  C  +A+ +D+++   +++LV  AVGT FS R+G+ ++ +A+ AV+RV T    R EVD+KRYA+VEKIPGGE+ DC V++GVMFNK  TH+KMRR+IENPR+LL DCPLEYKKGESQ NVE+T EED+ ++LRMEEEYIEN+C+ I+A  PDIV+TEKGVSDLAQHYL KA ITAFRRLRKTDNNRIARAVGAT+V RP+E++ESD+GTGCGLFEVRKIGDEYF+FLE CKDAKACT++LRGGSKDVLNEVERNL DAMQVVRN+VFEP+LLPGGGATEM +++ALS++A  VEGV QW F+A   ALEVIPRTLAQN GANV+R +T+LRAKHA+    T+GI G TG + DM + GIW+PY+VK QT+KTA+E+ACMILRIDDIVSG K
Sbjct:   70 RSMLKMLLDPMGGIVLTNDGHAILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILAGEMLSMAEPFLERNIHPTLVVKGYTRALQVALNTCKEIAKHVDIEDTASIQELVKTAVGTTFSSRFGNIVIGLAVDAVRRVVTYSGDRPEVDIKRYAKVEKIPGGEIADCAVLNGVMFNKVPTHAKMRRRIENPRILLFDCPLEYKKGESQANVEITNEEDFESMLRMEEEYIENLCSHIIALRPDIVVTEKGVSDLAQHYLTKAGITAFRRLRKTDNNRIARAVGATIVHRPEEVRESDLGTGCGLFEVRKIGDEYFTFLEECKDAKACTIMLRGGSKDVLNEVERNLQDAMQVVRNIVFEPKLLPGGGATEMCIAEALSREASNVEGVDQWPFQAVGQALEVIPRTLAQNAGANVIRSITELRAKHASGGCRTYGIHGHTGRIADMAEEGIWDPYSVKVQTFKTAIESACMILRIDDIVSGTK 553
[Close]
BLAST of mRNA_L-elsbetiae_contig2045.6160.1 vs. uniprot
Match: A0A7S2XKF7_9STRA (T-complex protein 1 subunit gamma n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XKF7_9STRA)

HSP 1 Score: 702 bits (1812), Expect = 5.570e-247
Identity = 354/509 (69.55%), Postives = 417/509 (81.93%), Query Frame = 1 
Query:    1 RSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLSVAEPILTRSVHPTQIVMGYARALQTALEACDALAETIDVDNGPQLKKLVDAAVGTKFSHRWGDKLVMMAIQAVKRV-------------RTVVDGRVEVDVKRYARVEKIPGGEMEDCMVMDGVMFNKDVTHSKMRRKIENPRVLLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEVRKIGDEYFSFLEGCKDAKACTVLLRGGSKDVLNEVERNLADAMQVVRNVVFEPRLLPGGGATEMAVSQALSKKAQEVEGVQQWAFKAAAAALEVIPRTLAQNCGANVVRVLTQLRAKHA---NEAK---------CTWGIDGTTGVMTDMKDLGIWEPYTVKTQTYKTAVEAACMILRIDDIVSGIK 1452
            RSMLKMLLDPMGG+VITNDGNCILREVDV+HP AKSMIELSR+QDEEVGDGTTSVIIL GE++  A P +  ++HPT IV GY +ALQ AL  C+  A  ID+++   +KKLV++ +GTKFS RW DK+V MAI AV  V              T  + ++EVD+KRYA+VEKIPGGE+ D  V+ GVMFNKDVTHSKMRRKIENPR+LLLD PLEYKKGESQTNVE+T EEDWNT+L+MEEEY+EN+C +I+AF PDIVITEKGVSDLAQH+  KA+ITAFRRLRKTDNNR+ARA GAT+VSR DEIQESDIGT CGLFE+RKIGDEYF+FLE CKD KACT++LRGGSKDVLNE+ERNL+DAMQVVRNV+F+P+LLPGGGATEMAV+  L +  Q+VEGVQQ  F A   A+EVIPRTLAQNCG +V+R +TQLRAKHA   +EA+         C WGI+G TG + DM++LGIWEP++VK QT KTA+E+ACMILRIDDIVSG K
Sbjct:   44 RSMLKMLLDPMGGVVITNDGNCILREVDVSHPTAKSMIELSRSQDEEVGDGTTSVIILAGEVMMKAGPFINNNLHPTVIVQGYNKALQEALLICERQALVIDINDTVLMKKLVESCIGTKFSSRWNDKMVDMAIAAVLTVARPSSNSPETSTAHTPYNHKMEVDIKRYAKVEKIPGGEISDSCVLKGVMFNKDVTHSKMRRKIENPRILLLDSPLEYKKGESQTNVEITDEEDWNTMLKMEEEYVENMCMEIIAFKPDIVITEKGVSDLAQHFFAKANITAFRRLRKTDNNRVARATGATIVSRTDEIQESDIGTNCGLFEMRKIGDEYFAFLEECKDPKACTIMLRGGSKDVLNEIERNLSDAMQVVRNVIFDPKLLPGGGATEMAVATGLRRAGQKVEGVQQGPFMAVGEAMEVIPRTLAQNCGVSVIRTVTQLRAKHAAAYDEAEKSTDEKTKPCNWGINGITGDLVDMEELGIWEPFSVKVQTIKTAIESACMILRIDDIVSGSK 552
[Close]
BLAST of mRNA_L-elsbetiae_contig2045.6160.1 vs. uniprot
Match: A0A7S3VCB2_9STRA (T-complex protein 1 subunit gamma n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VCB2_9STRA)

HSP 1 Score: 702 bits (1811), Expect = 8.800e-247
Identity = 354/512 (69.14%), Postives = 420/512 (82.03%), Query Frame = 1 
Query:    1 RSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLSVAEPILTRSVHPTQIVMGYARALQTALEACDALAETIDVDNGPQLKKLVDAAVGTKFSHRWGDKLVMMAIQAV---KRVRTVVDGR-----VEVDVKRYARVEKIPGGEMEDCMVMDGVMFNKDVTHSKMRRKIENPRVLLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEVRKIGDEYFSFLEGCKDAKACTVLLRGGSKDVLNEVERNLADAMQVVRNVVFEPRLLPGGGATEMAVSQALSKKAQEVEGVQQWAFKAAAAALEVIPRTLAQNCGANVVRVLTQLRAKHANEAKCTW----------------GIDGTTGVMTDMKDLGIWEPYTVKTQTYKTAVEAACMILRIDDIVSGIKHGQK 1464
            RSMLKMLLDPMGGIVITNDGNCILRE+DV+ P AKSMIELSRAQDEEVGDGTTSVIIL GEML +AEP++T  +HPT IV GY RALQ AL+ C+ +A+ +DV+N  Q+K++V++ +GTKFS+RW DK+V MA+QAV    R +T   G      +EVD+KRYA+VEKIPGGE+ D +V+ GVMFNKD THSKMRR+IENPR+LLLDCPLEYKKGESQTNVE+T  +DWNT+LRMEEEY+EN+C +I+AF PDIVITEKGVSDLAQHYL KA+ITAFRRLRKTDNNRIARA GAT+VSR DEIQESDIG GCGLF + KIGDE+F FL+ CKD KACT++LRGGSKDVLNE+ERNL DAM+VVRNVV++P+LLPGGGATEMAV+  + +   +VEGVQQ  F A   A+EVIPRTLAQNCG +V+R +TQLRAKHA  A   W                GI+GTTGV+  M++LGIWEP++VK QT KTA+E+ACMILRIDDIVSG K  Q+
Sbjct:   47 RSMLKMLLDPMGGIVITNDGNCILREIDVSQPTAKSMIELSRAQDEEVGDGTTSVIILAGEMLILAEPLITEMLHPTVIVQGYTRALQEALDICERMAKVVDVENEVQMKEIVNSCIGTKFSNRWNDKMVEMALQAVLTVARSKTPGSGTKSGQTMEVDIKRYAKVEKIPGGEIADSVVLKGVMFNKDTTHSKMRRRIENPRILLLDCPLEYKKGESQTNVEITNTDDWNTMLRMEEEYVENMCMEIIAFQPDIVITEKGVSDLAQHYLAKANITAFRRLRKTDNNRIARATGATIVSRTDEIQESDIGNGCGLFHMDKIGDEWFCFLDECKDPKACTIVLRGGSKDVLNEIERNLHDAMEVVRNVVYDPKLLPGGGATEMAVAMGIRRAGLKVEGVQQRPFLAVGEAMEVIPRTLAQNCGVSVIRTVTQLRAKHA-AAYDEWEKNSKESGVVPPASDFGINGTTGVLVSMEELGIWEPFSVKVQTIKTAIESACMILRIDDIVSGSKKSQR 557
[Close]
BLAST of mRNA_L-elsbetiae_contig2045.6160.1 vs. uniprot
Match: TCPG_THAWE (T-complex protein 1 subunit gamma n=3 Tax=Thalassiosiraceae TaxID=29202 RepID=TCPG_THAWE)

HSP 1 Score: 701 bits (1808), Expect = 2.600e-246
Identity = 356/509 (69.94%), Postives = 410/509 (80.55%), Query Frame = 1 
Query:    1 RSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLSVAEPILTRSVHPTQIVMGYARALQTALEACDALAETIDVDNGPQLKKLVDAAVGTKFSHRWGDKLVMMAIQAVKRV----RT---------VVDGRVEVDVKRYARVEKIPGGEMEDCMVMDGVMFNKDVTHSKMRRKIENPRVLLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEVRKIGDEYFSFLEGCKDAKACTVLLRGGSKDVLNEVERNLADAMQVVRNVVFEPRLLPGGGATEMAVSQALSKKAQEVEGVQQWAFKAAAAALEVIPRTLAQNCGANVVRVLTQLRAKHANE------------AKCTWGIDGTTGVMTDMKDLGIWEPYTVKTQTYKTAVEAACMILRIDDIVSGIK 1452
            RSMLKMLLDPMGGIVITNDGNCILREVDV+HP AKSMIELSRA DEEVGDGTTSVIIL GEML  AEP +  ++HPT IV GY  ALQ AL  C+  A  +DV +  ++K LV + +G KFS RW D ++ MA++AV  V    RT         V   ++EVD+KRYA+VEKIPGGE+ DC V+ GVMFNKDVTHSKMRR+IENPR+LLLD PLEYKKGESQTNVE+T EEDWNTLL+MEEEY+EN+C +I+AF PDIVITEKGVSDLAQHY  KA+ITAFRRLRKTDNNR+ARA GAT+VSR DEI+ESDIGTGCGLFE+RKIG+EYF+F E CKD KACT++LRGGSKDVLNE+ERNL DAMQVVRNVVF+PRLLPGGGATEMAVS  L K   ++EG+QQ  F A   A+EVIPRTLAQNCG +V+R +TQLRAKHA               KC WGIDGTTG + DM++ G+WEP++VK QT KTAVE+ACMILRIDDIVSG K
Sbjct:   46 RSMLKMLLDPMGGIVITNDGNCILREVDVSHPTAKSMIELSRAHDEEVGDGTTSVIILAGEMLINAEPFVRTNIHPTIIVRGYNYALQEALTICEEWALVVDVHDSERVKSLVQSCIGAKFSSRWNDIMIDMALKAVLTVSRESRTPSFTPEANDVYAQKMEVDIKRYAKVEKIPGGEISDCAVLSGVMFNKDVTHSKMRRRIENPRILLLDTPLEYKKGESQTNVEITDEEDWNTLLKMEEEYVENMCMEIIAFKPDIVITEKGVSDLAQHYFAKANITAFRRLRKTDNNRVARATGATIVSRTDEIRESDIGTGCGLFEMRKIGEEYFAFFEECKDPKACTIILRGGSKDVLNEIERNLTDAMQVVRNVVFDPRLLPGGGATEMAVSVGLRKAGLKLEGIQQGPFLAVGDAMEVIPRTLAQNCGVSVIRTVTQLRAKHAAAYEDSETSGNGTFPKCNWGIDGTTGKLVDMEEFGVWEPFSVKVQTIKTAVESACMILRIDDIVSGSK 554
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2045.6160.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LU47_ECTSI0.000e+097.76T-complex protein 1 subunit gamma n=1 Tax=Ectocarp... [more]
A0A836CR16_9STRA3.730e-27276.85T-complex protein 1 subunit gamma n=1 Tax=Tribonem... [more]
A0A7S2SP58_9STRA7.300e-26675.66T-complex protein 1 subunit gamma n=1 Tax=Rhizochr... [more]
A0A7S2FP00_9STRA4.900e-26475.36T-complex protein 1 subunit gamma n=1 Tax=Florenci... [more]
W7TWK9_9STRA4.690e-25874.54T-complex protein 1 subunit gamma n=2 Tax=Monodops... [more]
A0A6S9KVF4_HETAK1.040e-25773.97T-complex protein 1 subunit gamma n=1 Tax=Heterosi... [more]
A0A7R9U7E4_9STRA1.270e-25172.31T-complex protein 1 subunit gamma n=1 Tax=Pinguioc... [more]
A0A7S2XKF7_9STRA5.570e-24769.55T-complex protein 1 subunit gamma n=1 Tax=Attheya ... [more]
A0A7S3VCB2_9STRA8.800e-24769.14T-complex protein 1 subunit gamma n=1 Tax=Chaetoce... [more]
TCPG_THAWE2.600e-24669.94T-complex protein 1 subunit gamma n=3 Tax=Thalassi... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2045contigL-elsbetiae_contig2045:650..13148 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score944.1
Seed ortholog evalue2.6e-272
Seed eggNOG ortholog2880.D8LU47
Preferred nameCCT3
KEGG koko:K09495
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000902,GO:0001101,GO:0002199,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005832,GO:0005856,GO:0005874,GO:0005886,GO:0005975,GO:0006457,GO:0006458,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006884,GO:0007154,GO:0007165,GO:0007166,GO:0007338,GO:0007339,GO:0008037,GO:0008150,GO:0008152,GO:0008361,GO:0009311,GO:0009566,GO:0009653,GO:0009719,GO:0009725,GO:0009751,GO:0009826,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009988,GO:0009992,GO:0010033,GO:0010556,GO:0010557,GO:0010604,GO:0010638,GO:0014070,GO:0015630,GO:0016020,GO:0016043,GO:0016049,GO:0016301,GO:0016310,GO:0016462,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0019538,GO:0019725,GO:0019953,GO:0022414,GO:0022607,GO:0023052,GO:0030104,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031647,GO:0032204,GO:0032206,GO:0032210,GO:0032212,GO:0032502,GO:0032535,GO:0032879,GO:0032880,GO:0032989,GO:0032991,GO:0033043,GO:0033044,GO:0035036,GO:0036211,GO:0040007,GO:0042221,GO:0042493,GO:0042592,GO:0042623,GO:0043170,GO:0043209,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043412,GO:0043933,GO:0044085,GO:0044183,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044297,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044703,GO:0045935,GO:0046677,GO:0046931,GO:0048518,GO:0048522,GO:0048589,GO:0048856,GO:0048869,GO:0048878,GO:0050789,GO:0050794,GO:0050821,GO:0050896,GO:0051052,GO:0051054,GO:0051082,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051704,GO:0051716,GO:0055082,GO:0060255,GO:0060341,GO:0060560,GO:0061077,GO:0065003,GO:0065007,GO:0065008,GO:0070201,GO:0070202,GO:0070203,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0090066,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0101031,GO:0140096,GO:1901564,GO:1901700,GO:1901998,GO:1903827,GO:1903829,GO:1904356,GO:1904358,GO:1904814,GO:1904816,GO:1904851,GO:1904951,GO:2000112,GO:2000278,GO:2000573,GO:2001252
EggNOG free text desc.unfolded protein binding
EggNOG OGsCOG0459@1,KOG0364@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036,ko03110,ko04147
Ec32 ortholog descriptionT-complex protein 1, gamma subunit
Ec32 orthologEc-16_000190.1
Exons13
Model size2008
Cds size1467
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815843.4596-UTR-L-elsbetiae_contig2045:649..6551622815843.4596-UTR-L-elsbetiae_contig2045:649..655Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2045 650..655 +
1691683140.3273523-UTR-L-elsbetiae_contig2045:649..6551691683140.3273523-UTR-L-elsbetiae_contig2045:649..655Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2045 650..655 +
1622815843.6203384-UTR-L-elsbetiae_contig2045:12613..131481622815843.6203384-UTR-L-elsbetiae_contig2045:12613..13148Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2045 12614..13148 +
1691683140.5134969-UTR-L-elsbetiae_contig2045:12613..131481691683140.5134969-UTR-L-elsbetiae_contig2045:12613..13148Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2045 12614..13148 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815843.4725788-CDS-L-elsbetiae_contig2045:655..7271622815843.4725788-CDS-L-elsbetiae_contig2045:655..727Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2045 656..727 +
1691683140.3444562-CDS-L-elsbetiae_contig2045:655..7271691683140.3444562-CDS-L-elsbetiae_contig2045:655..727Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2045 656..727 +
1622815843.485092-CDS-L-elsbetiae_contig2045:1841..19381622815843.485092-CDS-L-elsbetiae_contig2045:1841..1938Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2045 1842..1938 +
1691683140.3621137-CDS-L-elsbetiae_contig2045:1841..19381691683140.3621137-CDS-L-elsbetiae_contig2045:1841..1938Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2045 1842..1938 +
1622815843.5005412-CDS-L-elsbetiae_contig2045:2387..24461622815843.5005412-CDS-L-elsbetiae_contig2045:2387..2446Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2045 2388..2446 +
1691683140.3821206-CDS-L-elsbetiae_contig2045:2387..24461691683140.3821206-CDS-L-elsbetiae_contig2045:2387..2446Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2045 2388..2446 +
1622815843.5124607-CDS-L-elsbetiae_contig2045:2977..31141622815843.5124607-CDS-L-elsbetiae_contig2045:2977..3114Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2045 2978..3114 +
1691683140.393946-CDS-L-elsbetiae_contig2045:2977..31141691683140.393946-CDS-L-elsbetiae_contig2045:2977..3114Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2045 2978..3114 +
1622815843.5229695-CDS-L-elsbetiae_contig2045:4230..43691622815843.5229695-CDS-L-elsbetiae_contig2045:4230..4369Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2045 4231..4369 +
1691683140.4072328-CDS-L-elsbetiae_contig2045:4230..43691691683140.4072328-CDS-L-elsbetiae_contig2045:4230..4369Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2045 4231..4369 +
1622815843.5326383-CDS-L-elsbetiae_contig2045:5404..55181622815843.5326383-CDS-L-elsbetiae_contig2045:5404..5518Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2045 5405..5518 +
1691683140.4163132-CDS-L-elsbetiae_contig2045:5404..55181691683140.4163132-CDS-L-elsbetiae_contig2045:5404..5518Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2045 5405..5518 +
1622815843.5427248-CDS-L-elsbetiae_contig2045:6281..64581622815843.5427248-CDS-L-elsbetiae_contig2045:6281..6458Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2045 6282..6458 +
1691683140.4313188-CDS-L-elsbetiae_contig2045:6281..64581691683140.4313188-CDS-L-elsbetiae_contig2045:6281..6458Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2045 6282..6458 +
1622815843.5552022-CDS-L-elsbetiae_contig2045:6779..69221622815843.5552022-CDS-L-elsbetiae_contig2045:6779..6922Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2045 6780..6922 +
1691683140.4403946-CDS-L-elsbetiae_contig2045:6779..69221691683140.4403946-CDS-L-elsbetiae_contig2045:6779..6922Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2045 6780..6922 +
1622815843.5697045-CDS-L-elsbetiae_contig2045:8085..82001622815843.5697045-CDS-L-elsbetiae_contig2045:8085..8200Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2045 8086..8200 +
1691683140.4496295-CDS-L-elsbetiae_contig2045:8085..82001691683140.4496295-CDS-L-elsbetiae_contig2045:8085..8200Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2045 8086..8200 +
1622815843.5808878-CDS-L-elsbetiae_contig2045:9681..97741622815843.5808878-CDS-L-elsbetiae_contig2045:9681..9774Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2045 9682..9774 +
1691683140.4590836-CDS-L-elsbetiae_contig2045:9681..97741691683140.4590836-CDS-L-elsbetiae_contig2045:9681..9774Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2045 9682..9774 +
1622815843.5910552-CDS-L-elsbetiae_contig2045:10866..109861622815843.5910552-CDS-L-elsbetiae_contig2045:10866..10986Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2045 10867..10986 +
1691683140.468133-CDS-L-elsbetiae_contig2045:10866..109861691683140.468133-CDS-L-elsbetiae_contig2045:10866..10986Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2045 10867..10986 +
1622815843.600937-CDS-L-elsbetiae_contig2045:11710..118421622815843.600937-CDS-L-elsbetiae_contig2045:11710..11842Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2045 11711..11842 +
1691683140.481087-CDS-L-elsbetiae_contig2045:11710..118421691683140.481087-CDS-L-elsbetiae_contig2045:11710..11842Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2045 11711..11842 +
1622815843.610504-CDS-L-elsbetiae_contig2045:12544..126131622815843.610504-CDS-L-elsbetiae_contig2045:12544..12613Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2045 12545..12613 +
1691683140.5005512-CDS-L-elsbetiae_contig2045:12544..126131691683140.5005512-CDS-L-elsbetiae_contig2045:12544..12613Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2045 12545..12613 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2045.6160.1prot_L-elsbetiae_contig2045.6160.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig2045 656..12613 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig2045.6160.1

>prot_L-elsbetiae_contig2045.6160.1 ID=prot_L-elsbetiae_contig2045.6160.1|Name=mRNA_L-elsbetiae_contig2045.6160.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=489bp
MLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGT
TSVIILTGEMLSVAEPILTRSVHPTQIVMGYARALQTALEACDALAETID
VDNGPQLKKLVDAAVGTKFSHRWGDKLVMMAIQAVKRVRTVVDGRVEVDV
KRYARVEKIPGGEMEDCMVMDGVMFNKDVTHSKMRRKIENPRVLLLDCPL
EYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKG
VSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGT
GCGLFEVRKIGDEYFSFLEGCKDAKACTVLLRGGSKDVLNEVERNLADAM
QVVRNVVFEPRLLPGGGATEMAVSQALSKKAQEVEGVQQWAFKAAAAALE
VIPRTLAQNCGANVVRVLTQLRAKHANEAKCTWGIDGTTGVMTDMKDLGI
WEPYTVKTQTYKTAVEAACMILRIDDIVSGIKHGQKQG*
back to top

mRNA from alignment at L-elsbetiae_contig2045:650..13148+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig2045.6160.1 ID=mRNA_L-elsbetiae_contig2045.6160.1|Name=mRNA_L-elsbetiae_contig2045.6160.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=12499bp|location=Sequence derived from alignment at L-elsbetiae_contig2045:650..13148+ (Laminarionema elsbetiae ELsaHSoW15)
AGGTCCATGCTGAAGATGCTCCTGGACCCGATGGGAGGCATCGTCATCAC
CAACGACGGCAACTGCATCCTAAGAGAGGTGAGGATAGTGAGACCCGGCG
TCGGTCATGGTGCAGTCATGCTGAGACAGCAGTAAGAGTATACAGGTGGG
TACATCGATCGTAGCGTCTTATTATTTGAGGTGTCGGTGCCTGCTTTAGA
GACGCGCCTCTTTTCTTGGAATTTGTGGAGAAATACGCTACAGAAAAACG
CCAACACGGGGGTGCGATAACCCGCATGATTGCGGTACGCGCTTTTCTGT
CCTTTGATTTTCCGTCGTGGTTGTGTCGATCTTCTCGGTGGTCCGTTTTT
GTTCTGGTGCACACCCTTTGTGGGTTCCGTTGGCCCGTGACCACGAGAAC
TAATCGCACCTTGTGTATGGCTACATAGATCAGTAAGGGCAGATGTGGGT
ACTTGAGTAGAGAGATCGGAGTGGTTCCCAATGTGGTCACAACAGCAACA
GCAACAACCACGATATATACAACACGCGAGCGCAAGCGAAAATAAAAGCC
CCATGGCAAAAGGGGTGCTGTTGTGACAACCGCACCCGGAGGAGGTGCGC
GTGCACCTTGCTCTGAAAAGGTCCACACCCGCAAAGAGCTTCACTCGGTC
GCACGGCCTTGCCGTATCATACGTAGGAGCATGTATGACCACGGCTCACC
GAGAGGCGGCGGCGCTTGGGTCTGCGAGGCGTTGGAGGAGCCCAGGCAGC
AGTTGCGCCTTTTTGGTGGTCCTCCCAACCCGCCGTTGATCGGCAACAAG
CGTTGCCTGTGTGTGTGTTTTCGTGTGTCCGCCCCGATTTTTTCGGGTCG
GGGGCGTCTGCCCCACCCTTTTCGGTTGTGGTGTGTGCTGCACGTGTCGG
TGTGGCGTGTGTGTGCTACACGTTTCGGCGTGGTGTGCGCTACACGTTTC
GGTGTAGTGTGTGCTACACGTTTCTCGCGGTGCATGTGTTCTCTGTAGGT
ACAGTGAGACGTATCCGCTGGGGTCACGCAGGAGGGGAATTTTTTTTTTT
TTTGCCCCACCTTCCTTCCTCCTGCGCGGTGGGGGCCTTGACTTTTAGCG
CGAGAAGGTATTAAGGCGTGCATGACGTGCACAAAAAACTCTCGCACAAC
TCTTGCAAGGCTTTCGGAAATACCCCCCCCCCCCGCATCCAGGTGGACGT
GGCCCACCCGGCCGCCAAGAGCATGATCGAGCTCAGCCGCGCCCAGGACG
AGGAGGTGGGAGACGGCACAACCTCCGTCATCATTCTCAGTGAGTCATGA
CATCATTCCCCGTACGTGCATGCATAGGTATACCCGCAGGAGAGGGTCCA
CCCCCCCCCCCCCCCCCATCCTGTGTGACCCCGGTTGGGTCGTCTAGCTA
GTCGTAGTGGAGGAAGGGGGACAGTGGGGCAGACGACGAATAAGCCAATA
ATAATAATGGGAGGAAAAAAATAAACATAAACAATATTGTAGATATGTGT
ACATGGCGTTGTCCTCCCTTGCCCGGTATTATTTGTTTGTTCTCCCACGA
ACGGCAAGTTGCGCCGCCCTCTTCTCTTTACAGAGTCTTTTTACGTAGTA
ACACGGTGTGCCCCGCCCCCCCCCCCTCCCCCCGCGCCACGCGTGCACAC
CTCGTAACCCCCTCCACTCCTTTTTGTCTTGCTCGGTGCTCTCGCTCACG
AAAACCGCCGTCGAATCGACGCGTGCTCTCTGCTGCAGCCGGAGAGATGC
TTTCGGTGGCGGAACCGATCCTCACCAGGAGTGTGCACCCGACCCAGGTG
TGCTGGCCGCGAAAGGCGATTTTTGTTTATTTTGTTTTTTTGTTCCCGTT
ATATTCCTTGAGAACTCCCCGAGGTGTAAACATTTTTCAAAAGCCGATTT
TCTTCACAACCGAAGAGGGTACAATTGACGAAAATGCTGATTTTGGAAAA
AAGATTTCGGACGAGATCCTTCCAAGGGCACACACATCGCTCGACAACAG
CAACCCGCCGCCCATTGCGGAGAAAATCGGCTTTGAAAATTGTTTACACT
CCGGGGCGTCCCCAAGGGGAATGTTGCGGTAGTTGTACACGGAGTGTTGT
ACTCGTGCAGCGGTTGCATGTTTTTTCCTTCCTCTGGCGTTTTTTATTTT
ATTTTTTGTCACGCCGCTAAGCACACCAAAGCCCCAAATCACTCGAGCAC
TCCCGCGGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTAATTTAGGCT
TCGTCTGTTCCCTCACTCACGACGTTCCTCTGCCTGGCCTGCCTTGTGTT
GCATTGCTCCTTTCCCCCCTCCCCGCAGATCGTGATGGGCTACGCGCGCG
CGCTGCAGACGGCGCTGGAGGCCTGTGACGCCCTGGCGGAGACGATCGAC
GTCGACAACGGCCCGCAGCTCAAGAAGCTCGTCGACGCCGCCGTCGGCAC
CAAGTTTTCTCACAGGTATTGGCGGTGGACGGATGAACGCGGTTGGAGTG
ATTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTGGGAGGGGT
GCATACCGTAATCATGCGGGTTATGGCACCCCCGTGTCAGCGTTTATCTA
TAGCATATTTCTCCACAACCAGGAGGGCGCCAACACTAACTGATACCTCT
CTGGAAAGCCCCCGACGAGAAAACCACCCTTTTCGGCAGTGGTACCCTCC
TGGTTGTGGAGAAATACGCTATAAAAAAACGCTTAACACGGGGGTGCGAT
AACCCGCATGATTACGGTAGTCGGCCGCTGTGTGCGTGCGCTTTGCTGCG
CTACGCGCGTTTATGCATGTATGTGCGTGTGTTTGTTCCGCACGTGTGAC
CGACGGTTTCGTTTTTTTGGCGGTGTGCGTGTGCGCTATTTAGTTATCTA
GCGTCTCTCTTGTTTTTTCCTTTCGCTCTTCCTCTCTCACGCAACAGATG
GTGTCGTGGGACTGCCAGCCCTCTTATTCTACCTGCTTGATACATGCGCG
TTTCAAGGGTATACATACACGGAGATTGTTGCTCTCCGTAGGCCCCCCTG
TGGTGCATGTGTCTGCGTTCTTTCGCCCTCGGCGGCCGCTACCGCTGCCG
CAGGGAGTTCCGTGGTGGTCGCTGAAGGGGCCTCTGCGAAGCAAATCATA
GTTCCCCCGGGGAGTGTTCCCGCGGGTGTGACGGCGAACGAAGCTCTAAC
CCTCACGGCGGATTGCCCTCTATCTACGTGCGACCTTTATCCGGACGGCA
ACGTGTGCCTGTTGCTGTTTTTGTTGATTTTATTTATTTTTATATTTTTC
TTCGCAACTATTTTCAGTGCTCGAGGGGCTCCTTGTCACGAGGGCATCTT
GCCAGAGTACTGAACCGTGGTCACACAGAAGGGTTCCTTCCCCCGAGGCC
CCCTACCCCCCCTTCTACGGTGCTTGCCCCCCTTAAGATTTTTGTCATTG
TAGCTTTTCTCTCACCACCAAAGTCAGCACAAAAGCTTTCGCTGAAGTGA
GAACGCCGTGTGCATGCATGCACGCGTGCGTGCTGTGCTTGCTTGCGCGC
ATCGCTTGCCTGTTTATTTGTGTGCGTGAAGGTGGGGCGACAAGCTGGTG
ATGATGGCCATCCAGGCCGTGAAGCGGGTCCGCACCGTCGTGGACGGCCG
CGTGGAGGTGGACGTGAAGCGCTACGCCAGGGTGGAGAAGATTCCTGGGG
GAGAGATGGAGGACTGCATGGTGGGTGCCGCGGTTCGCGTTATTCGTGGC
GTGTGTGGCAGGGCCCCAATCCTGAAAAAGTGGCACTACTGCTGTGGGGG
ATCTTTCACTCTATTTTCTAGATACCGTAGGTGACACAAGATATCACACC
CCCTGGGCCGAATTTTAGAGCTCCATTACTCCGTGACGAAGGTGTCAGCA
CCAAACGACACATTTTCGGACAGCCCTCGCTCGGATCTTTCCAATGCACC
CCCTTTCGGCCCTGGCGCTCTTCTTGCTGTGGGGAGGAATCGAGCTTTGA
AAATCTGTCCAGGGGGTGTGGTATCTTGTGTCACCTATGGTAAAAAAAAA
ACGCTGCCCCCCACAGCTCTTTTTGAGAATTGGGAACTGGCTCTATTGCA
GGAAACCTAAATCATCAACAGATTCAGTCCGGCTTTTCTCTCAGGCAGCA
AAGAGGGGCATGCGGGGGCTGCAATACCTCACACTTCTGCCACCAAACTG
ACTTAAGCCGAGATCGGAGGAGGGGGAGGGGGGGGTATACTAATTCCTGT
ATATTTGTTTTGGGGGGACGGCAGCCTAGATTCTTAAGGGGGCTATACTA
TTTCCTGTATGTTTTACCAACTGGTCCAGGCAAAAAAAACGTGGGACCGG
GGGGGGGGCGGGGGGGGTGGCATAAGGGTGAGGTATTGCAGCCCGCATGC
CCCTTGCAGGCAGGGTGGGGGGGCTCTAGGTAAAAGCTTCTTCGGCTCGA
ACTGTGCATACATACATACTTCTACACACGGAAAATGCGTCTTGCCCGAT
TCTTCAGGGCCGTTCGTTCTTTTTTTGTGCGTTTAGATAGCGCTTCCTTT
CCTCGGTGCCGCCTGCCTGCTCGCCTGCGTGCCTGCGTGCCTGCGTGCCT
GCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGACTGACTGACTGACTGA
CTGACTGACTGACTGACTGACTGACTGACTGCCTGACTGCCTGACTGCCT
GACTGCCTGACTGGCTGGCTGTCTTTCTGCGTTTGGTCGATGTGTTTGTG
GACAGGTTATGGACGGCGTGATGTTCAACAAGGACGTGACACACTCCAAG
ATGAGGAGAAAGATCGAGAACCCGCGGGTGTTGCTGCTCGACTGCCCCCT
CGAGTACAAGAAGGGAGAGGTGTGTGTCTGTGTCTGTGTCTGTGTCTGTG
TCTGTGTCTGTGTCTGTGTCTGTCTCGTGTGAGTATGTATTTGTGTGGCG
ATTTATTTGCTCTTCTTTGGGTTCTGCTTGCGCCTTTCGTAAGTAGCTTC
CAAGCTGCCGCTTTTCATGTACATAGGTATGTACTCCCCGTCTTTCTATT
TTCAAGTTTCCTTTACTAAATGTCAGCCGTCTCCGTCCAACCTGCTGTGC
ATAACTTCGTTCCAGGGGACTAGTGCTGCTGCCGCTGTTGTCGACACACT
CTAATAACTTCTCTTTTTTAGGCTGTTTGGTGTCTGGGTAGCCCTCGATA
TCTGGCGTACAAGGAGGACTTAGCGAGCAGCACCATCAGCTGTTCGTGGA
TCCGTGTGGTGGTTGTTACATTACGTCCCGAAATTACCACATCCTCGGAT
GCACCCCCGGACAACAAACACGTACAATACACACCTCCACCACCGCCGCC
GCCGCCGCCGCCAGCGTTAACAAACACCACCCCCACTCCTCAAACCGTGT
CGCGAAAAACCGTGTTGAATTTTTAGGAAATTTAGGTGTGTTTTTCTACT
CGGCCGGACAATATTACGTCACTGCTACCCATGTATGTGGATATGTGGAA
TACCGGTTGAACCCCACGGAGTCCCATCTCAAGTGTGGGCTAGGTTCAGT
TTTTGATTTTATATGAATTATCTTTCAAACGTGCGCGTCGTCATTGTCGC
CGTCGTTTTATCATGATGATAACCACCATCAGTCTCAGACGAACGTGGAG
GTGACGAAGGAGGAGGACTGGAACACCCTGCTGAGGATGGAGGAGGAGTA
CATCGAGAACATCTGCGCGCAGATCGTGGCGTTCCACCCGGACATCGTCA
TCACCGAAAAGGGCGTCAGCGACCTCGCGCAGCACTACCTTATGAAGGCC
GACATCACGGTGAGTTGAGGCGCACAAAGGGTGAGAGCTGGTCGGCTTTG
GAGTAGCCTAGCCGAAGGCCGGTATCACGGTGAGACACGCAGAGCGAGCT
AATTCAGTCCGGAGTAGTAGGTTAGCATTCCGGCTTGGCTGCGCGGTCCT
GTGTACACACACACACACATAGTCCAGAGCATCAAAAGCCCTCGTGTCTT
GACCTTCTGGTGATGAAGAGATGTAACTGTTTCACGACTTTCGGGCCTTC
TTCATTGTCTTTCTGTTTGTTGATTCGGTCCGCCGCCGCCGCCGCCGCCA
CCGCCAAATATTTTCATACCTCCTCTCCAGGCGTTCCGCCGACTCCGGAA
GACGGACAACAACCGCATCGCTCGCGCGGTTGGGGCCACCGTGGTGAGCA
GGCCCGACGAGATCCAGGAGTCGGACATCGGCACGGGCTGCGGGCTGTTC
GAAGTCCGCAAGATCGGGGACGAGTGAGTCTGGTGATTTGTGGCATCATG
TGTATGTATGTACGATATGTATGTATGCGGCAGCCTGGCGATCGATACTT
GGAGCCCCTATATATATATATATCATTGGTATAACTACTGTAAGCTTTTT
GTGGCGATTGTTCCGAGGCGCACCACGATTGGCGGCGTGTTTTGTGGCTT
CGGCTCTTAGATGTCCAGAACAAAACAAAATGTCACTATTGTGTGTGTGT
GTGTGTGTGTACGCACCACGTTTGCAAGGCAGTTGTCTGCGTTCTTTTAC
GGTGAGAGAGAGGAGAGAGGAAGACAAGCGACGGTGCGAGGGAGGTGGTC
GCCCCTGACTCGATGGCGTACATTCTCTATTTGGGCATCGCGAAGAAGAG
TGCCAGTGATTGTTTGATCCATGCGTATTTCTGTATAAACGATGAGAGAA
CAGCTGAAATATGCAACACTCAAGTTAAAATAGCTACATTGGTCATGTAT
TTAGTCGTGGAATGTTTCTAGTGACGTCAGCGATCTACGTAGATGCGTCC
AGCGTGTGAACGAGGTCGTTCCAGGGGGCACCGCTGTTGTAGACGGACTA
TCGTAACCCTCCCTCACCGCCCCGTCTATATAACATACCTAATGATGGTA
TTTAGCAAAAGCCGGCGGGCGTGTGAACCGGCCTACGTTGGCAGGCGGGA
AAACCCCTGTCAACAAACGGTACAGCATTCTTCTTGGAGGTAGCCGCGTC
GCGTCTTCGACGCGGAAGTAAGTACGCAGGGTTTCCAGCCCTCAAACCAC
AACCACGACGCTTACAAGGCCTAACCCAACCCTAAACCCTAACCCTAACC
CCCACCCAACTCCCCCCAAAGCTAGGTTGGTGTGCATTGGTTAGGTTCTA
GGTCGCTGTCCCCGGTCAAACAGCTTCTCGGCTGGGCGTTTCCCGCCTGC
CAAAGTTGGCAGAAACCCGCGCGCGCCGGCACAAAAGCAGCAAACCCTGT
ACTTTATAGTTGCTGCTTGTTTTTTTTTGAAAGATAGATCAGATATGTAC
TCGAAAACGGAACCTAGCCCACATTTGAGACGGGAGGGGCTCCGTGGGGT
CCAACCTTGTCGCGTTGTTTTAACATGTTGTGGCTTTGTTGTGTTTGCTG
CTGCTGCTGCTGTTGAAATATGTCATGTCCCCACAGGTACTTCTCGTTTT
TGGAGGGCTGCAAGGACGCCAAGGCGTGCACCGTTCTGCTCAGGGGTGGC
AGCAAGGATGTGCTCAACGAGGTCGAGCGGAACCTTGCGGACGCCATGCA
GGTACACACATACTTCCTTCATATTACCATCAAGACTTCCAGATGCATAC
CAAACTTGACAAAAAAAAGGCTTGCTGGTTGTGTGCCACTAGTAGTCCGA
GGCGGTGAGGGAGGGTTGGTGTACATCTACAACAACAGTGGAACGACTTT
TTGGCAGGTTGGAGGTAGACCGCTGATTTTTGTAGATATTTACCTATTTA
AAAAAACACCTGCCATATATTTTGACGGCTGACGTCACATACGCGTAGTA
TTTATGTATCTACAAACGAAAAAAAAAACATTTGTAGACACTTACCGTAA
TCATGCGTATGTTCGCACCCTGTGCCAGCATAAATACTACGCATATGTGA
CGTCACCCGTCAAAATATAGAGGAGTATTGGAGTATTCACAACCACGTGG
TTGTGAAGAAATACGCTTTAGAAAAATGCTAACACAGGGGCGGGAACCTT
CGCATGATTACGGTATTAAAAAAAAAACGTATTTTAACGGCTGACGTCAC
ATACGTGTGTATAGTATGGTATATTTTATCTAGAAAAAAGAAAAGAAAAA
AAGGGGTCTTCGAGTCTGGCTCAAAAGGAAAACCCGTCTTCGCCGTGACT
TTGCGTCGCCTGATCTTCCCCTTGTTCGCCATCCACAAGGGTGCGCCTGC
CTTTATTTTCTTTTTTTAGCCTTCGTTTCGTTGACGCGCGCTGATTTGTT
GGAGTGGGGGGATTCGCGAACTGGACTGGTTGTGCGTGGCTCTGCATTTC
TCGGCGAACCAAGACCTTGGTTGTTGTCACACCCGCAGTGGTTTCATTAC
GCGCCCGAGGGTCTACATGTACATACATATATACGGTCGTACGTAAATTA
GCCGTGACAATAGTAGTTCGAGCGTTATTTATTTGTTTATTTATTTATTT
ATTTCGAGCGTGCAAAAAACAAATGGCCGTGGTTGGAACTACTACTCTCG
GGGCTTGTCTTGATCCGGCAAGATTTTCAGTGGGGTTGCTTGCTGCTGCT
GCTGCTGCTGCTCGTTATTTTCCTCCTCCTCGTACACAGTAGTTTTGCCA
CCGGTTGCTGCTGCATCTCTGTCTACCCTTTGGCGTCTTGACGGCAGTGT
TTCGCGCTTCGGCTTGCGTGGGGTCTGTGTTTTCGTGCGTTCGTCGTCAG
CAGCCTTTTTATATATGGGTCAACGTTTTCATTAAAAAATATATATATAT
GCATGCGTACGAAGTACAAGGTTGCATGCCTGCTCTGACTGATCGTTTGA
TTTAGTAAAGGATTCAGATATAAATGTCGAACTTTTTCAGATATAAATGT
CGAACGCATTTTTCTGAGGTCTTGCTCGGGTTTAATTTGGGCGTTCAGGT
TTTTTGCTTTTTTTTATTCGTTTTTTTTGTTCGGATTTTCAGGTGTTATT
TATTATTGTGTATTTACAAAGAACTCAAACGGATTGCTTTTAATTTTATG
AAAAGTCTTACATATGCTTTTCTCTCACACAGGTGGTACGTAACGTGGTG
TTCGAGCCGCGTCTGCTGCCGGGCGGCGGCGCTACGGAGATGGCTGTGTC
CCAGGCCTTGTCCAAGAAGGCGCAGGTAGGCACAGACAAACACACACATG
GCACGCGCGCGGGTAGCTCACAGACTCTGCACCACGGGTATTGCATGTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTGTACTTTTTTGTTTGTCTTTTT
GGCTCCCATCCTCCACTTCTACTCTATCTAGACGACCCAACCGGGGTCAC
ATAGGAGGGGGGGGTTGGTGCGGCACCCTGACTCGAGAAGGTGCCGGAAG
GCGCTAAGAACACGCGTTGCACTTTTTCTGCTAAGAGCAGCCTGTTGTTG
CCGCCATCTTCTTGACCTTTGATTCTGATCTTTTGGTCTTTGATCTTGAT
CTTTGATGTTGATCTTTGACCTCGACCTTTGACCTCGATCTTTGGCCTCA
ACCTTCACCTCGATCTTTGATCTAGATCTTTTGGTCCTGATCTTTGATCT
AGATCTTTTGATCCTGATCTTGCCCGGGCGTTACGTTTCGTCACTTATTT
TCCGGTTGGGATATCCTAATCGCGCTTGCCTGTTAGTCGTGCGGAGGGGA
ATAATCACGTCAGCCTCGAGCCCAACAGTGTGTCGTTTTTTGCGTTGTTG
TGTTGCGCTTGGGCGCTGTGACGGCCTGGCTTGTCAACGTGTCGACACCG
CGTTTGACCACCGGGACTGTAGTCATCTGTTGACGTGAATACAATACTTC
CAAGTGCTTGGTACTAGTTTGTTTTCAGCCTCGCAAGAGTTCGGGGGAGT
GAAGAACGAAGCTCGCAACATCACACCAAAAGCCATCGGGCGAGTGCGAG
TTCCCATCAGCCCAGCCACCGGGGCGTTTTTGAGGGGGCCCGGCAGACTC
GTGTAAGCTTCTGCTTAACCCCCGGCGGGATCTTCCCGAAGTCAGGCGGG
CGGGGACCCCCAAAAAGCTTTCCTGTCTCCTTTTCTATCTCTTTTTTTCT
TAAAAATCTCTCCTGTGCGTTTTTTCCCTGGGACTTTTCATCCGCTCCTT
GTGTTTGCTGCGCCCTTGTTTTGTTTGTCTTCGAAAGAAATGGAACCTAA
CCCACGTTGAGACGGGACTCCGTGATGATATTCAAGCGCTGTTTTTTGTT
TTCTTGCACTTGCGCAGGAGGTGGAGGGCGTGCAGCAGTGGGCCTTCAAG
GCGGCCGCTGCCGCCCTGGAGGTGATCCCCCGCACCCTGGCGCAGAACTG
CGGGGCGAACGTAGTGCGAGTGCTGACACAGCTGAGGGTGAGAATGGTAT
CCTATGTACAATGATCGTGGCATGTGTGTGGTAGGTACAAATGTGTCCCA
GTTTGCTCCAACTTCTACCCGTTCGCTCGCTCTGTACCTCTGTCTGTTCG
TCCTGTCTTCCGATTTTGTCGGTGTTATTTATTTATTTATTTATTTACTC
GGGAGTATTTATTATTGGAGTATTTAGGAGTATTTTGTTTTAGCCTTTGT
CGAGTTCCAGGTAATTTCCATCATATGCTACATGTGTTGTAGCCTTTCGG
CGTTTTTTGTCGGACAGTTTTGCCTCGTCCGCCGTGTCACTCTTGCGTGT
TGTCGGTGTCATTTATTTATTTGTTTTTTTACATAGGAGTTTTTTTTTTA
AGTCTTTGTCGAGTTCCAGGAATTTTCCATCGTATGTGTGTAAATACATG
TTTTTTTTTATCTTTCAGCGTTCTTTGTCGGACTCTCTTGCCTCGTCCGT
CGTGTCACTCTTGCGTGTTGTTTGAGAAAGACAGTAGTTTTAACGCGCAT
TCATGGCCATGGTCCGAATATTGGCACTTGACCACGTTCCACCTTTTGCC
CTGGATTTGGTATATACGAAGTAGGAAAGACTAAAAAAATCAAACTGCTG
TCTGCTCCTCAACTCCTATATAAAGCAGCACACGTTTGTCCTTGGTAGGT
CTGTCGAGACTCAAAAGCGTTGTTCCGTCCTGTACACGCGTAATTTATCT
TGTAAAACCAGGCAAAACACGCCAACGAGGCCAAGTGCACGTGGGGCATC
GACGGTACGACGGGCGTGATGACCGACATGAAGGACCTCGGCATCTGGGA
ACCCTACACCGTCAAGACGCAGACTTACAAGACGGCGGTCGAGGTGAGCG
GAGGAGATGTGGTTTTTTTGCGGCTGGGGTCCGCAACACGCCATGCATAC
GGCTGGGTTGATTTTCTCATGGCTGGCAGGGACCCCGATGTGTGCCGTGG
AGTTATATGCCGGTTGATGCACAATTTTTTGAAAATAATTCAGAACATAA
AAAAAGAGGTCAACGTGCCCCTGACTCTTGTGTGCGGCATGCGGTGAATT
AACATTCCGTGAGGGCGGCGATTTATGTAGTCCGAACATAAAAAAAAAAA
AACATCAACACTGGAAAAGTCCTACACCTTCTTGCACAATCAAACAGCAT
TTTGAATACATGCTGTACATCCAAGATTTCGTGTTAAAGTTACAGAGGGG
CGTTCTCGCTAAAGCATGTGGTGTGTTTGATGCCCCAACAACGTGTGCAC
AGAGGTTCACGTTGAATGAAGGGGTGTGTGGTATGGTTGACACCCCAACT
CCCCAACAACATCGCCGTGTGAGCAGTAGACTTCGCAGTTTTCACTGGAA
GAAATCATATGGGATAAAGTATGAAAACGGCTACTGGGGGGTCGGTTTGG
GGTTAGGGAGTTAGGGTTACGGTTACGGAACCTCTAATATTTCCTTATAT
TTAGACAGGAATTCTTCGCGAAAGCGGGGTCCCGTGTGAGTCTTCTAACC
CCGACCGACCCCCCTTGTTTTCCGATCCCCCACCCGCGCGGGCAGGCGGC
GTGCATGATCCTTCGCATAGACGACATCGTGTCCGGCATCAAGCATGGGC
AAAAGCAGGGATAAAGAGAAAAATGGAGGACAAGCCTGGCCCTGCGGCGC
AACATCACCGTGAAGTGTCAGACAGCGTGGAAGAGGAAGAGGAAGAGGAG
GGGGAGGGGGTCGGTACTGCGGGGCGTGCGTAGAAAACCTGGACCCGCTG
GGTCGATTTTTTCAGCTGAGGTGCTCCGCTTTGGTAGTTCGCAACGCTGT
GTCGTATGTAATCACCGACCGCAGTCCTTTTGTTTTTCTCAGAGCTGCGC
TTCGCCGCTGCCGGTGCGTTTTCGTCCCAAGAAAACCGTGTTGGGTGTGG
TGTTCGACGAAGCAGGACCAGCGGCGGCGAGGGGAGATTTTTGGCTCTGC
TTGAGGCGAAAGTGTGAAGTAAAGTCGGCCGTGCAGTGTGCGTGCGCTCT
CAGGAAGGTCGTGTTCGCGTGGTCATGGTCGGTCGTGTTCGCGTGGTCAT
GGTCGGTCGTGGCGCACGCCACCGACCGTAAATCCTCCCATGTAGGCCGA
ACAAACATGGAGATGTGTTCCCAGTAAGCATGCCCTTGTAGGGGCGGGG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig2045:650..13148+

>mRNA_L-elsbetiae_contig2045.6160.1 ID=mRNA_L-elsbetiae_contig2045.6160.1|Name=mRNA_L-elsbetiae_contig2045.6160.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2934bp|location=Sequence derived from alignment at L-elsbetiae_contig2045:650..13148+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCTGAAGATGCTCCTGGACCCGATGGGAGGCATCGTCATCACCAACGA
CGGCAACTGCATCCTAAGAGAGATGCTGAAGATGCTCCTGGACCCGATGG
GAGGCATCGTCATCACCAACGACGGCAACTGCATCCTAAGAGAGGTGGAC
GTGGCCCACCCGGCCGCCAAGAGCATGATCGAGCTCAGCCGCGCCCAGGA
CGAGGAGGTGGGAGACGGCACAACCTCCGTCATCATTCTCAGTGGACGTG
GCCCACCCGGCCGCCAAGAGCATGATCGAGCTCAGCCGCGCCCAGGACGA
GGAGGTGGGAGACGGCACAACCTCCGTCATCATTCTCACCGGAGAGATGC
TTTCGGTGGCGGAACCGATCCTCACCAGGAGTGTGCACCCGACCCAGCCG
GAGAGATGCTTTCGGTGGCGGAACCGATCCTCACCAGGAGTGTGCACCCG
ACCCAGATCGTGATGGGCTACGCGCGCGCGCTGCAGACGGCGCTGGAGGC
CTGTGACGCCCTGGCGGAGACGATCGACGTCGACAACGGCCCGCAGCTCA
AGAAGCTCGTCGACGCCGCCGTCGGCACCAAGTTTTCTCACAGATCGTGA
TGGGCTACGCGCGCGCGCTGCAGACGGCGCTGGAGGCCTGTGACGCCCTG
GCGGAGACGATCGACGTCGACAACGGCCCGCAGCTCAAGAAGCTCGTCGA
CGCCGCCGTCGGCACCAAGTTTTCTCACAGGTGGGGCGACAAGCTGGTGA
TGATGGCCATCCAGGCCGTGAAGCGGGTCCGCACCGTCGTGGACGGCCGC
GTGGAGGTGGACGTGAAGCGCTACGCCAGGGTGGAGAAGATTCCTGGGGG
AGAGATGGAGGACTGCATGGTGGGGCGACAAGCTGGTGATGATGGCCATC
CAGGCCGTGAAGCGGGTCCGCACCGTCGTGGACGGCCGCGTGGAGGTGGA
CGTGAAGCGCTACGCCAGGGTGGAGAAGATTCCTGGGGGAGAGATGGAGG
ACTGCATGGTTATGGACGGCGTGATGTTCAACAAGGACGTGACACACTCC
AAGATGAGGAGAAAGATCGAGAACCCGCGGGTGTTGCTGCTCGACTGCCC
CCTCGAGTACAAGAAGGGAGAGGTTATGGACGGCGTGATGTTCAACAAGG
ACGTGACACACTCCAAGATGAGGAGAAAGATCGAGAACCCGCGGGTGTTG
CTGCTCGACTGCCCCCTCGAGTACAAGAAGGGAGAGTCTCAGACGAACGT
GGAGGTGACGAAGGAGGAGGACTGGAACACCCTGCTGAGGATGGAGGAGG
AGTACATCGAGAACATCTGCGCGCAGATCGTGGCGTTCCACCCGGACATC
GTCATCACCGAAAAGGGCGTCAGCGACCTCGCGCAGCACTACCTTATGAA
GGCCGACATCACGTCTCAGACGAACGTGGAGGTGACGAAGGAGGAGGACT
GGAACACCCTGCTGAGGATGGAGGAGGAGTACATCGAGAACATCTGCGCG
CAGATCGTGGCGTTCCACCCGGACATCGTCATCACCGAAAAGGGCGTCAG
CGACCTCGCGCAGCACTACCTTATGAAGGCCGACATCACGGCGTTCCGCC
GACTCCGGAAGACGGACAACAACCGCATCGCTCGCGCGGTTGGGGCCACC
GTGGTGAGCAGGCCCGACGAGATCCAGGAGTCGGACATCGGCACGGGCTG
CGGGCTGTTCGAAGTCCGCAAGATCGGGGACGAGCGTTCCGCCGACTCCG
GAAGACGGACAACAACCGCATCGCTCGCGCGGTTGGGGCCACCGTGGTGA
GCAGGCCCGACGAGATCCAGGAGTCGGACATCGGCACGGGCTGCGGGCTG
TTCGAAGTCCGCAAGATCGGGGACGAGTACTTCTCGTTTTTGGAGGGCTG
CAAGGACGCCAAGGCGTGCACCGTTCTGCTCAGGGGTGGCAGCAAGGATG
TGCTCAACGAGGTCGAGCGGAACCTTGCGGACGCCATGCAGGTACTTCTC
GTTTTTGGAGGGCTGCAAGGACGCCAAGGCGTGCACCGTTCTGCTCAGGG
GTGGCAGCAAGGATGTGCTCAACGAGGTCGAGCGGAACCTTGCGGACGCC
ATGCAGGTGGTACGTAACGTGGTGTTCGAGCCGCGTCTGCTGCCGGGCGG
CGGCGCTACGGAGATGGCTGTGTCCCAGGCCTTGTCCAAGAAGGCGCAGG
TGGTACGTAACGTGGTGTTCGAGCCGCGTCTGCTGCCGGGCGGCGGCGCT
ACGGAGATGGCTGTGTCCCAGGCCTTGTCCAAGAAGGCGCAGGAGGTGGA
GGGCGTGCAGCAGTGGGCCTTCAAGGCGGCCGCTGCCGCCCTGGAGGTGA
TCCCCCGCACCCTGGCGCAGAACTGCGGGGCGAACGTAGTGCGAGTGCTG
ACACAGCTGAGGGAGGTGGAGGGCGTGCAGCAGTGGGCCTTCAAGGCGGC
CGCTGCCGCCCTGGAGGTGATCCCCCGCACCCTGGCGCAGAACTGCGGGG
CGAACGTAGTGCGAGTGCTGACACAGCTGAGGGCAAAACACGCCAACGAG
GCCAAGTGCACGTGGGGCATCGACGGTACGACGGGCGTGATGACCGACAT
GAAGGACCTCGGCATCTGGGAACCCTACACCGTCAAGACGCAGACTTACA
AGACGGCGGTCGAGGCAAAACACGCCAACGAGGCCAAGTGCACGTGGGGC
ATCGACGGTACGACGGGCGTGATGACCGACATGAAGGACCTCGGCATCTG
GGAACCCTACACCGTCAAGACGCAGACTTACAAGACGGCGGTCGAGGCGG
CGTGCATGATCCTTCGCATAGACGACATCGTGTCCGGCATCAAGCATGGG
CAAAAGCAGGGATAAGCGGCGTGCATGATCCTTCGCATAGACGACATCGT
GTCCGGCATCAAGCATGGGCAAAAGCAGGGATAA
back to top