mRNA_L-elsbetiae_contig204.6139.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig204.6139.1 vs. uniprot
Match: A0A6H5JCF0_9PHAE (RibD_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCF0_9PHAE) HSP 1 Score: 446 bits (1148), Expect = 3.960e-147 Identity = 251/378 (66.40%), Postives = 286/378 (75.66%), Query Frame = 2 Query: 149 MRKHAAIAFIAPLSYLASATAAAAAATLNHAQYTAKNPRGDATLLDQQLNQQQLRRIIEDSVLKGIATGMVAHHEKVTRGELRRRPFVTLTYAQSIDGSIAGADKSQVFLSGSESQTMTHGLRSIHDAILVGAGTVRQDNPRLNVRHWPPAKPSVVPHAGADSSCDSYFSEEGAIPDRPSSSQAGGGGGVAETQAPRAVILAGSLSELPRSMRLGGAVVFTNLSSPEAWRWLAEWAQRSKEGSQDLAANDFVIVHCRSRPDGRCDVGDCLEKLYSMGFKSLMVEGGATVISSFLRGCHEDTAMDE-GDDSFGGQLVDRVVITIAPTFLQGYNVLATEANA-GDASTASDSGFPLPVLDVGYVRLGRDLVVVGAPARCS 1276 MRKH +A A + + TAAA ++HA G L+D++L+QQQLR IED VL G+A+GM H E+V RGELR RPFVTLTYAQSIDGSIA ADKSQVFLSGSES+TMTHGLRSIHD ILVGAGTVRQDNPRLN+RHWPPA G + D+ S A G G+ ET APRAV+ +G+LS+LP SMRLGGAVVFT+LSSP+AWRWLAEWAQRS+EGS+D AANDFVIVH + DGRCDVGDCLEKLYSMGF+SLMVEGGATVISSFLRGC E T +E G + GQLVDRVV+TIAPTFLQGYNVLATE NA G +T+ SGFPLP+LDVG+VRLG+DLVVVGAPA C Sbjct: 148 MRKHVIVA--AAVGLVPCLTAAAT--KVHHAHPPTS---GGPALVDERLSQQQLRHKIEDGVLSGLASGMREHRERVERGELRPRPFVTLTYAQSIDGSIAAADKSQVFLSGSESRTMTHGLRSIHDGILVGAGTVRQDNPRLNIRHWPPASCGD----GGRGTXXXXXXXXXXDFDQARGSDAIGRRGM-ETAAPRAVVFSGNLSQLPHSMRLGGAVVFTDLSSPDAWRWLAEWAQRSREGSEDRAANDFVIVHSPLQADGRCDVGDCLEKLYSMGFRSLMVEGGATVISSFLRGCGEQTGREEEGGGNPDGQLVDRVVVTIAPTFLQGYNVLATEGNACGARTTSPGSGFPLPLLDVGFVRLGQDLVVVGAPACCQ 513
BLAST of mRNA_L-elsbetiae_contig204.6139.1 vs. uniprot
Match: D8LE35_ECTSI (RibD_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE35_ECTSI) HSP 1 Score: 346 bits (888), Expect = 6.780e-112 Identity = 189/264 (71.59%), Postives = 209/264 (79.17%), Query Frame = 2 Query: 500 MTHGLRSIHDAILVGAGTVRQDNPRLNVRHWPPAKPSVVPHAGADSSCDSYFSEEGAIPDRPSSSQAGGGGGVAETQAPRAVILAGSLSELPRSMRLGGAVVFTNLSSPEAWRWLAEWAQRSKEGSQDLAANDFVIVHCRSRPDGRCDVGDCLEKLYSMGFKSLMVEGGATVISSFLRGCHEDTAMDEGDDSFG----GQLVDRVVITIAPTFLQGYNVLATEANA-GDASTASDSGFPLPVLDVGYVRLGRDLVVVGAPARCS 1276 MTHGLRSIHD ILVGAGTVRQDNPRLN+RHWPPA G + S EE A D+ S A G G ET APRAV+LAG+LS+LPRSMRLGGAVVFT+LSSP+AWRWLAEWAQRS+EGS+D AANDFVIVH + DGRCDVGDCLEKLYSMGF+SLMVEGGATVISSFLRGC E+ A DE FG GQLVDRVV+TIAP FLQGYNVLATE NA G +T+ +GFPLP+LDVG+VRLG+DLVVVGAPA C Sbjct: 1 MTHGLRSIHDGILVGAGTVRQDNPRLNIRHWPPASCGD----GGRGTTSSEEXEEDAF-DQARGSDAIGRG-EKETAAPRAVVLAGNLSQLPRSMRLGGAVVFTDLSSPDAWRWLAEWAQRSREGSEDRAANDFVIVHSPLQADGRCDVGDCLEKLYSMGFRSLMVEGGATVISSFLRGCGEEMARDE---EFGRNPDGQLVDRVVVTIAPMFLQGYNVLATEGNACGARTTSPGAGFPLPLLDVGFVRLGQDLVVVGAPACCQ 255
BLAST of mRNA_L-elsbetiae_contig204.6139.1 vs. uniprot
Match: A0A835YLP6_9STRA (Dihydrofolate reductase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLP6_9STRA) HSP 1 Score: 170 bits (431), Expect = 1.130e-45 Identity = 106/246 (43.09%), Postives = 134/246 (54.47%), Query Frame = 2 Query: 401 RPFVTLTYAQSIDGSIAGADKSQVFLSGSESQTMTHGLRSIHDAILVGAGTVRQDNPRLNVRHWPPAKPSVVPHAGADSSCDSYFSEEGAIPDRPSSSQAGGGGGVAETQAPRAVILAGSLSELPRSMRLGGAVVFTNLSSPEAWRWLAEWAQRSKEGSQDLAANDFVIVHCRSRPDGRCDVGDCLEKLYSMGFKSLMVEGGATVISSFLRGCHEDTAMDEGDDSFGGQLVDRVVITIAPTFLQGY 1138 RPFVTLTYAQS+DGSIA ADK V +SG S+ MTHGLRS+HD ILVG GTVR+DNPRLNVR W + G D P PR ++L+ + LP +++ GAV+FT+ E WLA R+ G D A+D VIVHC + G CD+ DCL +L +MGF S+MVEGG +I +FL+ LVDR+V+T+AP L GY Sbjct: 1 RPFVTLTYAQSLDGSIASADKRPVRISGRASRIMTHGLRSLHDGILVGGGTVRRDNPRLNVREW--------------------VGDSGDSQDPP--------------PCPRPIVLSSQMG-LPMAIKAHGAVIFTSFCRAETQSWLAA---RAHGGGGD--ASDCVIVHCATAAGGCCDLRDCLARLAAMGFASVMVEGGGRIIRAFLQ----------------AGLVDRLVVTVAPLMLGGY 190
BLAST of mRNA_L-elsbetiae_contig204.6139.1 vs. uniprot
Match: A0A7X3Y5F6_9CHLR (GTP cyclohydrolase-2 n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A7X3Y5F6_9CHLR) HSP 1 Score: 127 bits (319), Expect = 9.230e-28 Identity = 107/309 (34.63%), Postives = 140/309 (45.31%), Query Frame = 2 Query: 344 IATGMVAHHEKVTRGELRRRPFVTLTYAQSIDGSIAGADKSQVFLSGSESQTMTHGLRSIHDAILVGAGTVRQDNPRLNVRHWPPAKPSVVPHAGADSSCDSYFSEEGAIPDRPSSSQAGGGGGVAETQAPRAVILAGSLSELPRSMRLGGAVVFTNLSSPEAWRWLAEWAQRSKEGSQDLAANDFVIVHCRSRP-DGRCDVGDCLEKLYSMGFKSLMVEGGATVISSFLRGCHEDTAMDEGDDSFGGQLVDRVVITIAPTFLQGYNVLATEANAGDASTASDSGFPLPVLDVGYVRLGRDLVVVGAPA 1267 +++ V EK + RRPFVTLTYAQS+DGSIA AD + LSGS+S MTH LRS +DAILVG GTV D+PRL VR +A+ Q P+ +IL RL + T L S WLA + +L A ++ +R DG D+ + LY G +SLMVEGGA VI+ L + VD VVITIAPT + G ++++ +A A+ FP + +GY R G DLVV G PA Sbjct: 209 VSSPFVPAAEKQALADANRRPFVTLTYAQSLDGSIASADSLPLHLSGSKSSEMTHLLRSSNDAILVGIGTVIVDDPRLTVR-------------------------------------------LADGQDPQPIIL---------DSRLRCPLDATLLESYRTMPWLATREDAPFDRQVELEAAGARVLRLPARESDGLVDLRALMATLYEDGVRSLMVEGGARVITELLE----------------ARFVDHVVITIAPTLVGGLQAVSSKNSAVSAA------FPR-LQSLGYKREGDDLVVWGRPA 442
BLAST of mRNA_L-elsbetiae_contig204.6139.1 vs. uniprot
Match: A0A2H3JBV3_WOLCO (2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate reductase n=1 Tax=Wolfiporia cocos (strain MD-104) TaxID=742152 RepID=A0A2H3JBV3_WOLCO) HSP 1 Score: 123 bits (308), Expect = 1.740e-27 Identity = 98/265 (36.98%), Postives = 129/265 (48.68%), Query Frame = 2 Query: 401 RPFVTLTYAQSIDGSIAGADKSQVFLSGSESQTMTHGLRSIHDAILVGAGTVRQDNPRLNVRHWPPAKPSVVPHAGADSSCDSYFSEEGAIPDRPSSSQAGGGGGVAETQAPRAVILAGSLSELP-----RSMRLGGA----VVFTNLSSPEAWRWLAEWAQRSKEGSQDLAANDFVIVHCRSRPDGRCDVGDCLEKLYSMGFKSLMVEGGATVISSFLRGCHEDTAMDEGDDSFGGQLVDRVVITIAPTFL------QGYNVLA 1150 RP+VTLTYAQS+D IAG Q+ LSG ES MTH LR++HDAI++G GT D+P+LN RH PP +P+A +++ PR +IL +L P ++ R G V+ T SS + E++QR KE +D A + GR D+ D L KL G +S+MVEGGA+VI SFL A G S G VD V++TIAPT + G NVLA Sbjct: 55 RPYVTLTYAQSLDAKIAGPGGKQLALSGKESLVMTHWLRTLHDAIMIGIGTALNDDPQLNTRHLPP-----LPNA------------------------------ISKYHNPRPIILDANLRLSPSCKLLKNYREGRGRRPWVISTTYSSS-----MQEYSQRKKE-LEDAGARVLELASEDGMEHGRFDIPDLLAKLKLFGIRSVMVEGGASVIQSFL-------AAASGGAS--GSQVDVVIVTIAPTLVGREGVEYGSNVLA 269
BLAST of mRNA_L-elsbetiae_contig204.6139.1 vs. uniprot
Match: A0A2P6BX91_9BACT (GTP cyclohydrolase-2 n=1 Tax=Salinibacter sp. 10B TaxID=1923971 RepID=A0A2P6BX91_9BACT) HSP 1 Score: 125 bits (315), Expect = 3.230e-27 Identity = 103/291 (35.40%), Postives = 134/291 (46.05%), Query Frame = 2 Query: 401 RPFVTLTYAQSIDGSIAGADKSQVFLSGSESQTMTHGLRSIHDAILVGAGTVRQDNPRLNVRHWPPAKPS-VVPHAGADSSCDS-YFSEEGAIPDRPSSSQAGGGGGVAETQAPRAVILAGSLSELPRSMRLGGAVVFTNLSSPEAWRWLAEWAQRSKEGSQDLAANDFVIVHCRSRPDGRCDVGDCLEKLYSMGFKSLMVEGGATVISSFLRGCHEDTAMDEGDDSFGGQLVDRVVITIAPTFLQGYNVLATEANAGDASTASDSGFPLPVLD-VGYVRLGRDLVVVGAP 1264 RPFVTLTYAQS+DGSIA D S + +SGSES + TH LR+ HDAILVG GTV D+PRLNVRH P+ VV + D+ S EG P ++ TN +P+ + L A +V P G C + +E L G +S+MVEGG VISSF+R Q+VD +++T+AP F+ G L+T A+ D + AS P LD V Y LG+DLV+ G P Sbjct: 231 RPFVTLTYAQSLDGSIATDDGSPLAISGSESMSFTHQLRATHDAILVGIGTVLSDDPRLNVRHSSGKHPTPVVLDSQLRFPTDARLLSREGPKP-----------------------------------------IIATNDKAPD-------------DRKHALEAEGATVVRLSCDPRGIC-LDPLMEDLAERGVESVMVEGGTEVISSFMR----------------QQMVDHLILTVAPMFVGGQRALSTLASDTDDAEASS----FPELDHVRYRWLGKDLVLEGMP 446
BLAST of mRNA_L-elsbetiae_contig204.6139.1 vs. uniprot
Match: A0A8H5LT06_9AGAR (2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate reductase n=1 Tax=Tetrapyrgos nigripes TaxID=182062 RepID=A0A8H5LT06_9AGAR) HSP 1 Score: 119 bits (298), Expect = 1.840e-26 Identity = 95/290 (32.76%), Postives = 126/290 (43.45%), Query Frame = 2 Query: 401 RPFVTLTYAQSIDGSIAGADKSQVFLSGSESQTMTHGLRSIHDAILVGAGTVRQDNPRLNVRHWPPAKPSVVPHAGADSSCDSYFSEEGAIPDRPSSSQAGGGGGVAETQAPRAVILAGSLSELPRSMRLGGAVVFTNLSSPEAWRWLAEWAQRSKEGSQDLAANDFVIVHCRSRPDGRCDVGDCLEKLYSMGFKSLMVEGGATVISSFLRGCHEDTAMDEGDDSFGGQLVDRVVITIAPTFLQGYNVLATEANAGDASTASDSGFPLPVLDVGYVRLGRDLVVVGAPAR 1270 RP VTLT+AQS+D IAG + Q+ LSG ES MTH +R++HDAI++G GT D+P+LN RH PP P+ + D+P PR VIL L P S L + S W + + A K L I+ DG + L+ L+ MG +SLMVEGGA VI SF S +LVD +++T+APTF+ V + A +SGF V +GRD VV P Sbjct: 24 RPHVTLTFAQSVDAKIAGQNGKQLILSGKESMVMTHWMRTMHDAIMIGIGTAFNDDPQLNTRHLPPRPPNPAQNGH----------------DKP-------------YHLPRPVILDTHLRFSPTSKLLKN---YQQGSGRRPWVFCSSDAPDVKRKQDALEQAGARIIQISGVEDGHLSLPAVLKSLHDMGIRSLMVEGGARVIRSFFSA------------STSSRLVDSIIVTVAPTFVGDDGV---GYSYDSALEGHNSGFKHAFTQV----IGRDSVVGLVPVE 262
BLAST of mRNA_L-elsbetiae_contig204.6139.1 vs. uniprot
Match: A0A0C3QCV1_9AGAM (2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate reductase n=1 Tax=Tulasnella calospora MUT 4182 TaxID=1051891 RepID=A0A0C3QCV1_9AGAM) HSP 1 Score: 117 bits (294), Expect = 5.890e-26 Identity = 99/294 (33.67%), Postives = 131/294 (44.56%), Query Frame = 2 Query: 395 RRRPFVTLTYAQSIDGSIAGADKSQVFLSGSESQTMTHGLRSIHDAILVGAGTVRQDNPRLNVRHWPP-AKPSVVPHAGADSSCDSYFSEEGAIPDRPSSSQAGGGGGVAETQAPRAVILAGSLSELPRSMRLGGAVVFTNLSSPEAWRWLAEWAQRSKEGSQDLAANDFVIVHCRSRPD-GRCDVGDCLEKLYSMGFKSLMVEGGATVISSFLRGCHEDTAMDEGDDSFGGQLVDRVVITIAPTFLQGYNVLATEANAGDASTASDSGFPLPVLDVGYVRLGRDLVVVGAPAR 1270 + RPFVTLTYAQS+DG IAG Q+ LSG+ES MTH +R++H+ ILVG GT D+P+LN R P A+P P IP I+ S + +L G N P W +E A K S + A IV +S P G+ D+ D L L +G KSLMVEGG VISSFL H+ + S G VD +++T+APT++ V A + + P V V +GRD +V P Sbjct: 28 QNRPFVTLTYAQSLDGKIAGKGGKQLILSGNESMLMTHWMRTMHEGILVGIGTALNDDPQLNTRRLPVRAEPYPQP-----------------IP-----------------------IILDSQLRFRSNCKLVGNYGSGNGRQP--WVLCSEEADPKKRESLENAG--VKIVPVKSNPQTGKLDLDDVLSILRKLGVKSLMVEGGQQVISSFLS--HKSS-------STGKSAVDSIIVTVAPTYVGNEGVGALD----------EGQLPAKVAHVSSTVMGRDSIVACRPTE 258
BLAST of mRNA_L-elsbetiae_contig204.6139.1 vs. uniprot
Match: A0A2T6FMN6_9GAMM (GTP cyclohydrolase n=2 Tax=Cellvibrio TaxID=10 RepID=A0A2T6FMN6_9GAMM) HSP 1 Score: 116 bits (291), Expect = 8.770e-26 Identity = 95/289 (32.87%), Postives = 128/289 (44.29%), Query Frame = 2 Query: 401 RPFVTLTYAQSIDGSIAGADKSQVFLSGSESQTMTHGLRSIHDAILVGAGTVRQDNPRLNVRHWPPAKPSVVPHAGADSSCDSYFSEEGAIPDRPSSSQAGGGGGVAETQAPRAVILAGSLSELPRSMRLGGAVVFTNLSSPEAWRWLAEWAQRSKEGSQDLAANDFVIVHCRSRP--DGRCDVGDCLEKLYSMGFKSLMVEGGATVISSFLRGCHEDTAMDEGDDSFGGQLVDRVVITIAPTFLQGYNVLATEANAGDASTASDSGFPLPVLDVGYV-RLGRDLVVVG 1258 RPFVTL+YAQS+DGSIA + LSG+ES +TH LRS+HD ILVG GTV D+P+LNVRHW P + V ++Q +P RL S W + + +G ++ C+S+P DGR + + L LY G + LMVEGGA VI++FL+ QLVD VVIT+ P + GY + GD DS LP ++ + RLG DL++ G Sbjct: 23 RPFVTLSYAQSLDGSIALRSSEPMALSGNESLRLTHQLRSMHDGILVGIGTVLSDDPQLNVRHWTGKNPQPI---------------------------------VLDSQL-----------RMPSDARL------RQCSEKPCWILTTQEREWPNQGGIEI---------CQSQPGSDGRVCLKNALALLYEKGIRHLMVEGGAHVITAFLK----------------AQLVDAVVITVVPRIVGGYKAV------GDLEI--DSRVDLPAINPFHSERLGDDLILWG 228
BLAST of mRNA_L-elsbetiae_contig204.6139.1 vs. uniprot
Match: UPI000D3C1FC3 (RibD family protein n=1 Tax=Saccharospirillum mangrovi TaxID=2161747 RepID=UPI000D3C1FC3) HSP 1 Score: 116 bits (291), Expect = 8.770e-26 Identity = 96/296 (32.43%), Postives = 131/296 (44.26%), Query Frame = 2 Query: 371 EKVTRGELRRRPFVTLTYAQSIDGSIAGADKSQVFLSGSESQTMTHGLRSIHDAILVGAGTVRQDNPRLNVRHWPPAKPSVVPHAGADSSCDSYFSEEGAIPDRPSSSQAGGGGGVAETQAPRAVILAGSLSELPRSMRLGGAVVFTNLSSPEAWRWLAEWAQRSKEGSQDLAANDFVIVHCRSRPDGRCDVGDCLEKLYSMGFKSLMVEGGATVISSFLRGCHEDTAMDEGDDSFGGQLVDRVVITIAPTFLQGYNVLATEANAGDASTASDSGFPLPVLDVGYVRLGRDLVVVG 1258 +K + RP VTL+YAQS DGSI A + LS S MTH LRS+HD ILVG GTV DNPRLNVR W G D P+ ++L L LP S +L S E W+ + EG+ D + ++V DG+ ++ + LY G +SLMVEGGA+VI++FLR L D V++T+AP F+ GY + G+ S A+ FP + D+ +LG +L+V G Sbjct: 15 QKAAQDSAPGRPHVTLSYAQSWDGSITTAPGETLALSSDASMQMTHQLRSLHDGILVGIGTVLADNPRLNVRKW----------TGKD---------------------------------PQPIVLDSQL-RLPPSSQL--------CQSAERGCWVL-----TTEGATDRDDCELIVVP--GDADGQVNLHAAMAALYERGIRSLMVEGGASVITAFLRAA----------------LADAVILTVAPVFVGGYKAV------GELSAANSLPFP-HIDDLHSQQLGNELIVWG 228 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig204.6139.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig204.6139.1 >prot_L-elsbetiae_contig204.6139.1 ID=prot_L-elsbetiae_contig204.6139.1|Name=mRNA_L-elsbetiae_contig204.6139.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=378bp MRKHAAIAFIAPLSYLASATAAAAAATLNHAQYTAKNPRGDATLLDQQLNback to top mRNA from alignment at L-elsbetiae_contig204:40073..45390+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig204.6139.1 ID=mRNA_L-elsbetiae_contig204.6139.1|Name=mRNA_L-elsbetiae_contig204.6139.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5318bp|location=Sequence derived from alignment at L-elsbetiae_contig204:40073..45390+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig204:40073..45390+ >mRNA_L-elsbetiae_contig204.6139.1 ID=mRNA_L-elsbetiae_contig204.6139.1|Name=mRNA_L-elsbetiae_contig204.6139.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2268bp|location=Sequence derived from alignment at L-elsbetiae_contig204:40073..45390+ (Laminarionema elsbetiae ELsaHSoW15)back to top |