mRNA_L-elsbetiae_contig2034.6119.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig2034.6119.1
Unique NamemRNA_L-elsbetiae_contig2034.6119.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig2034.6119.1 vs. uniprot
Match: D7FPJ6_ECTSI (DUF667 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPJ6_ECTSI)

HSP 1 Score: 339 bits (869), Expect = 8.840e-114
Identity = 192/311 (61.74%), Postives = 222/311 (71.38%), Query Frame = 1
Query:    1 MAENLNSNPSYEHSNQNPDGLHDSRQIGDRLPSDSWHIDAVLPPNAEEMVYEDLQPVAATIQECDVLQEGNEASVFDDEELGVQVVELLGRRCCVAFPCSSILQHLCLHVKV----RSVQTVIKGEEDANGSREKYRSTSQ---------FVQYQHVLVV-----------LAPLCMLGARL----SSFDSVAFSVPDRLLQFLQKTLDKFFSFEVEVVDDTKRYRYIDISNTRSVADIGSDRAFLPMKLEEGWQRVNIDLERTVRLVFGSSYLTTSQIVIRASARIAKIFFQSQPFSDYELPRHLRVVAE 849
            M   L  + S  H+  +P      RQIGDRL +DSWHIDA+LPP+A EMVYEDLQPVAA +QEC+VLQEGNEASVFDDEELGVQVVELLGRRC VAFPCSSIL++LCLHVKV    R + +++ G++     R +  + +          F Q+Q + V            L  L     R     SS  ++    P     FLQ TLDKFFSFEVE+VDDTKRYRYIDISNTRSVADIG DRA LP+KLE+GWQRVNIDLERTVRLVFGSSYLTTSQ+ +RASAR+AK+FFQSQPFSDYELP HLRVVAE
Sbjct:    1 MVSGLEMDRSSHHAKGSPAMTPQLRQIGDRLAADSWHIDALLPPHAGEMVYEDLQPVAAAMQECEVLQEGNEASVFDDEELGVQVVELLGRRCGVAFPCSSILRYLCLHVKVTQFLRVIHSIVSGKQKDGCCRARETTCATAARVPRFHFFDQHQRISVRFCSELACCNVWLQTLVTTRRRFVPNTSSSTNMRLPKPRLRPDFLQ-TLDKFFSFEVEIVDDTKRYRYIDISNTRSVADIGDDRALLPLKLEDGWQRVNIDLERTVRLVFGSSYLTTSQVTVRASARVAKLFFQSQPFSDYELPSHLRVVAE 310          
BLAST of mRNA_L-elsbetiae_contig2034.6119.1 vs. uniprot
Match: K3W6T8_GLOUD (DUF667 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6T8_GLOUD)

HSP 1 Score: 92.0 bits (227), Expect = 2.550e-18
Identity = 43/114 (37.72%), Postives = 72/114 (63.16%), Query Frame = 1
Query:  511 RLLQFLQKTLDKFFSFEVEVVDDTKRYRYIDISNTRSVADIGSDRAFLPMKL--EEGWQRVNIDLERTVRLVFGSSYLTTSQIVIRASARIAKIFFQSQPFSDYELPRHLRVVA 846
            R L    K L ++F F+VEVVDD ++YRY+  +N RS+A + +  A LP+    ++GW+ + +DL+      FG+ ++TT+Q+ I  + R+ ++FFQ + +SD ELP HL  + 
Sbjct:  148 RYLVLFVKNLGQYFEFQVEVVDDKQKYRYLKATNARSLARVDNSVAQLPLAFGQQQGWRYLCMDLQELTMQAFGTKHVTTTQVRIGGNCRLLRVFFQDELYSDAELPTHLTFLG 261          
BLAST of mRNA_L-elsbetiae_contig2034.6119.1 vs. uniprot
Match: A0A6G1S9M0_9ACAR (UPF0468 protein C16orf80 n=1 Tax=Aceria tosichella TaxID=561515 RepID=A0A6G1S9M0_9ACAR)

HSP 1 Score: 87.0 bits (214), Expect = 5.020e-17
Identity = 37/103 (35.92%), Postives = 65/103 (63.11%), Query Frame = 1
Query:  532 KTLDKFFSFEVEVVDDTKRYRYIDISNTRSVADIGSDRAFLPMKLEEGWQRVNIDLERTVRLVFGSSYLTTSQIVIRASARIAKIFFQSQPFSDYELPRHLRV 840
            K LD+FF+FE+E++DDTK  R    SN ++   +      +P+KLE GW  +N++L    R  +G++Y+ TS+I + A+ R+ +I+F  + ++D ELP   ++
Sbjct:   80 KNLDRFFTFEIEIIDDTKAKRRFRASNYQTRTRVKDFICTMPLKLESGWNHINLNLADFTRRAYGTNYVETSRITVNANCRLRRIYFADRQYTDEELPAEFKL 182          
BLAST of mRNA_L-elsbetiae_contig2034.6119.1 vs. uniprot
Match: A0A7R9PRD5_TIMGE (Hypothetical protein n=3 Tax=Timema TaxID=61471 RepID=A0A7R9PRD5_TIMGE)

HSP 1 Score: 85.5 bits (210), Expect = 4.400e-16
Identity = 40/118 (33.90%), Postives = 75/118 (63.56%), Query Frame = 1
Query:  487 SVAFSVPDRLLQFLQKTLDKFFSFEVEVVDDTKRYRYIDISNTRSVADIGSDRAFLPMKLEEGWQRVNIDLERTVRLVFGSSYLTTSQIVIRASARIAKIFFQSQPFSDYELPRHLRV 840
            S+A ++P   L  L K L K+F+F+V+V+DD    R +  SN RS  ++  D   +P++LE GW +V ++L+  ++  +GSSY+ T+++ I A+ R+ +++F  + + D ++P  LR+
Sbjct:   93 SLAITLP--YLVILLKNLKKYFTFQVDVLDDAGATRKLRASNFRSTVEVTPDLCHMPLRLELGWNQVTLNLDDLMKRAYGSSYVETTRLQINANCRLRRVYFMDRLYRDEDVPADLRL 208          
BLAST of mRNA_L-elsbetiae_contig2034.6119.1 vs. uniprot
Match: A0A5D6Y0V0_9STRA (DUF667 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0V0_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 7.300e-16
Identity = 40/115 (34.78%), Postives = 71/115 (61.74%), Query Frame = 1
Query:  511 RLLQFLQKTLDKFFSFEVEVVDDTKRYRYIDISNTRSVADIGSDRAFLPMKLEE---GWQRVNIDLERTVRLVFGSSYLTTSQIVIRASARIAKIFFQSQPFSDYELPRHLRVVA 846
            R L    K+LD+FF+F++EV+DD ++YR + ++N RS+A +      LP+       GW+ + +DL++     FG+ ++TT+ + I  + R+ ++FFQ + +SD ELP HL  + 
Sbjct:  116 RYLVLFVKSLDQFFAFQLEVLDDKQQYRTLKVTNARSLARVEGASVQLPLAFGGPGGGWRYLCMDLQQLTAQAFGTQHVTTTHVRIGGNCRLLRVFFQDELYSDAELPAHLTFLG 230          
BLAST of mRNA_L-elsbetiae_contig2034.6119.1 vs. uniprot
Match: A0A6B2LJY4_9EUKA (DUF667 domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LJY4_9EUKA)

HSP 1 Score: 83.6 bits (205), Expect = 8.000e-16
Identity = 39/100 (39.00%), Postives = 62/100 (62.00%), Query Frame = 1
Query:  526 LQKTLDKFFSFEVEVVDDTKRYRYIDISNTRSVADIGSDRAFLPMKLEEGWQRVNIDLERTVRLVFGSSYLTTSQIVIRASARIAKIFFQSQPFSDYELP 825
            L K +DKFFSFE++++DD    R    SN +SV  +      LP++L++GW ++ IDL    +  +G++YL T Q+ I A+ RI +I+F  +  +D ELP
Sbjct:   79 LVKNVDKFFSFEIQILDDKSVRRRFRASNFQSVTRVRPSICTLPLQLDDGWNQIQIDLAHYTKRAYGTNYLQTLQVQIHANCRIRRIYFAEKIMTDEELP 178          
BLAST of mRNA_L-elsbetiae_contig2034.6119.1 vs. uniprot
Match: A0A7R9DSI4_TIMCR (Hypothetical protein n=1 Tax=Timema cristinae TaxID=61476 RepID=A0A7R9DSI4_TIMCR)

HSP 1 Score: 81.6 bits (200), Expect = 3.100e-15
Identity = 35/108 (32.41%), Postives = 67/108 (62.04%), Query Frame = 1
Query:  517 LQFLQKTLDKFFSFEVEVVDDTKRYRYIDISNTRSVADIGSDRAFLPMKLEEGWQRVNIDLERTVRLVFGSSYLTTSQIVIRASARIAKIFFQSQPFSDYELPRHLRV 840
            L  L K L K+F+F+V+++DD    R +  SN RS  ++  D   +P++LE GW +V ++L+  +R  +GSSY+ T ++ I A+ R+ +++F  + + + ++P   R+
Sbjct:   32 LVMLLKNLKKYFTFQVDILDDVGEIRKMRASNFRSTVEVTPDLCHMPLRLEVGWNQVTLNLDDLMRRAYGSSYVETIRLQINANCRLRRVYFMDRLYREEDVPADFRL 139          
BLAST of mRNA_L-elsbetiae_contig2034.6119.1 vs. uniprot
Match: A0A182RQX8_ANOFN (DUF667 domain-containing protein n=1 Tax=Anopheles funestus TaxID=62324 RepID=A0A182RQX8_ANOFN)

HSP 1 Score: 82.8 bits (203), Expect = 4.500e-15
Identity = 40/106 (37.74%), Postives = 67/106 (63.21%), Query Frame = 1
Query:  526 LQKTLDKFFSFEVEVVDDTKRYRYIDISNTRSVADIGSDRAFLPMKLEEGWQRVNIDLERTVRLVFGSSYLTTSQIVIRASARIAKIFFQSQPFSDYELPRHLRVV 843
            L K + KFFSFE++++DD +  R +  SN +SV  + +  AF+P+ L  GW +V I+L    R  +G++Y+ T ++ I A+ RI +I+F  Q +++ E P  LR+V
Sbjct:   79 LLKNMKKFFSFEIQILDDRQSLRRLRFSNYQSVTRVDNFSAFIPISLAPGWGQVQINLADFTRKAYGTNYVETVRLQIHANVRIKRIYFCDQLYTNDETPPDLRLV 184          
BLAST of mRNA_L-elsbetiae_contig2034.6119.1 vs. uniprot
Match: A0A7R9DJ71_TIMPO (Hypothetical protein n=3 Tax=Timema TaxID=61471 RepID=A0A7R9DJ71_TIMPO)

HSP 1 Score: 81.6 bits (200), Expect = 1.030e-14
Identity = 36/108 (33.33%), Postives = 67/108 (62.04%), Query Frame = 1
Query:  517 LQFLQKTLDKFFSFEVEVVDDTKRYRYIDISNTRSVADIGSDRAFLPMKLEEGWQRVNIDLERTVRLVFGSSYLTTSQIVIRASARIAKIFFQSQPFSDYELPRHLRV 840
            L  L K L K+F+F+V+V+DD    R +  SN RS  ++  D   +P++LE GW +V ++L+  +R  +GSSY+ T ++ I A+ R+ +++F  + + + ++P   R+
Sbjct:   93 LVILLKNLKKYFTFQVDVLDDAGATRKLRASNFRSTVEVTPDLCHMPLRLEVGWNQVTLNLDDLMRRAYGSSYVETIRLQINANCRLRRVYFMDRLYREEDVPADFRL 200          
BLAST of mRNA_L-elsbetiae_contig2034.6119.1 vs. uniprot
Match: A0A430Q0I7_SCHBO (DUF667 domain-containing protein n=5 Tax=Schistosoma TaxID=6181 RepID=A0A430Q0I7_SCHBO)

HSP 1 Score: 79.7 bits (195), Expect = 1.870e-14
Identity = 39/118 (33.05%), Postives = 70/118 (59.32%), Query Frame = 1
Query:  487 SVAFSVPDRLLQFLQKTLDKFFSFEVEVVDDTKRYRYIDISNTRSVADIGSDRAFLPMKLEEGWQRVNIDLERTVRLVFGSSYLTTSQIVIRASARIAKIFFQSQPFSDYELPRHLRV 840
            S+A  +P  +L  + K L+K+FSFEV+++DD    R    S  ++   +      +PMKL+EGW +V  DL    R  +G++Y+ T ++ I A+ R+ +++F  + +S+ ELPR  ++
Sbjct:   32 SLAVKMP--ILVIVLKNLNKYFSFEVQILDDQNLKRRFHASTCQTTTVVKPFACMMPMKLDEGWNQVQFDLADFTRRAYGTTYIETVKLSIHANCRLRRVYFCDRIYSEDELPRDYKL 147          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2034.6119.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPJ6_ECTSI8.840e-11461.74DUF667 domain-containing protein n=1 Tax=Ectocarpu... [more]
K3W6T8_GLOUD2.550e-1837.72DUF667 domain-containing protein n=1 Tax=Globispor... [more]
A0A6G1S9M0_9ACAR5.020e-1735.92UPF0468 protein C16orf80 n=1 Tax=Aceria tosichella... [more]
A0A7R9PRD5_TIMGE4.400e-1633.90Hypothetical protein n=3 Tax=Timema TaxID=61471 Re... [more]
A0A5D6Y0V0_9STRA7.300e-1634.78DUF667 domain-containing protein n=1 Tax=Pythium b... [more]
A0A6B2LJY4_9EUKA8.000e-1639.00DUF667 domain-containing protein n=1 Tax=Arcella i... [more]
A0A7R9DSI4_TIMCR3.100e-1532.41Hypothetical protein n=1 Tax=Timema cristinae TaxI... [more]
A0A182RQX8_ANOFN4.500e-1537.74DUF667 domain-containing protein n=1 Tax=Anopheles... [more]
A0A7R9DJ71_TIMPO1.030e-1433.33Hypothetical protein n=3 Tax=Timema TaxID=61471 Re... [more]
A0A430Q0I7_SCHBO1.870e-1433.05DUF667 domain-containing protein n=5 Tax=Schistoso... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2034contigL-elsbetiae_contig2034:11627..13672 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score342.4
Seed ortholog evalue2e-91
Seed eggNOG ortholog2880.D7FPJ6
Hectar predicted targeting categoryother localisation
EggNOG free text desc.regulation of cilium movement involved in cell motility
EggNOG OGsKOG3213@1,KOG3213@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionCilia/flagella-associated protein 20
Ec32 orthologEc-12_000830.1
Exons4
Model size852
Cds size852
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2034.6119.1prot_L-elsbetiae_contig2034.6119.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig2034 11627..13672 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815840.0884862-CDS-L-elsbetiae_contig2034:11626..118131622815840.0884862-CDS-L-elsbetiae_contig2034:11626..11813Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2034 11627..11813 +
1691683138.1281621-CDS-L-elsbetiae_contig2034:11626..118131691683138.1281621-CDS-L-elsbetiae_contig2034:11626..11813Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2034 11627..11813 +
1622815840.1009746-CDS-L-elsbetiae_contig2034:12178..123751622815840.1009746-CDS-L-elsbetiae_contig2034:12178..12375Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2034 12179..12375 +
1691683138.138145-CDS-L-elsbetiae_contig2034:12178..123751691683138.138145-CDS-L-elsbetiae_contig2034:12178..12375Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2034 12179..12375 +
1622815840.1146972-CDS-L-elsbetiae_contig2034:12488..127121622815840.1146972-CDS-L-elsbetiae_contig2034:12488..12712Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2034 12489..12712 +
1691683138.14632-CDS-L-elsbetiae_contig2034:12488..127121691683138.14632-CDS-L-elsbetiae_contig2034:12488..12712Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2034 12489..12712 +
1622815840.1250634-CDS-L-elsbetiae_contig2034:13428..136721622815840.1250634-CDS-L-elsbetiae_contig2034:13428..13672Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2034 13429..13672 +
1691683138.15446-CDS-L-elsbetiae_contig2034:13428..136721691683138.15446-CDS-L-elsbetiae_contig2034:13428..13672Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2034 13429..13672 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig2034.6119.1

>prot_L-elsbetiae_contig2034.6119.1 ID=prot_L-elsbetiae_contig2034.6119.1|Name=mRNA_L-elsbetiae_contig2034.6119.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=284bp
MAENLNSNPSYEHSNQNPDGLHDSRQIGDRLPSDSWHIDAVLPPNAEEMV
YEDLQPVAATIQECDVLQEGNEASVFDDEELGVQVVELLGRRCCVAFPCS
SILQHLCLHVKVRSVQTVIKGEEDANGSREKYRSTSQFVQYQHVLVVLAP
LCMLGARLSSFDSVAFSVPDRLLQFLQKTLDKFFSFEVEVVDDTKRYRYI
DISNTRSVADIGSDRAFLPMKLEEGWQRVNIDLERTVRLVFGSSYLTTSQ
IVIRASARIAKIFFQSQPFSDYELPRHLRVVAE*
back to top

mRNA from alignment at L-elsbetiae_contig2034:11627..13672+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig2034.6119.1 ID=mRNA_L-elsbetiae_contig2034.6119.1|Name=mRNA_L-elsbetiae_contig2034.6119.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2046bp|location=Sequence derived from alignment at L-elsbetiae_contig2034:11627..13672+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCTGAAAATCTCAACTCAAACCCGTCGTATGAGCACTCAAATCAGAA TCCCGATGGGCTACACGACTCACGACAAATTGGTGATCGGCTACCTTCTG ATTCCTGGCACATAGACGCCGTCCTTCCGCCGAATGCGGAGGAAATGGTG TACGAAGATCTACAACCTGTAGCTGCTACCATACAAGGTAGTGATAAATC AGCTGTTAAAAATACACTCTCTTGGTGGTGGCCGATGACCAACTAGGAAC ATCTGCGAGTGTTCGTTTTGCGTGGAAACAAGTCGCCCACTTGTTATTTC TTCGTTGTTGGCTGGGGCCAAAGGAATACTGTGCGTACAGGAATGGCTTG TTCCACCACCTCTAAGCTCTACATAATATATCCCCGTCTCTGCGTATCTC TGCTAAGACCAGAACCGATGAACACAACGACTAGACTAGATGGCCCACTT CTACAGCAGAACTCTCTCTAGACATGCCCTCGAGTTTTATACAATGGTCA CAGACCCACGCACCTTGTCTACATGCCATGCTGTACGTACATATTCAAAC AGAGTGCGATGTGCTACAAGAAGGCAACGAGGCCTCTGTATTCGACGACG AGGAGCTCGGGGTACAAGTTGTCGAGCTGCTCGGGAGGAGGTGCTGCGTG GCATTTCCCTGCAGCTCCATTTTACAGCATTTGTGCTTGCACGTGAAGGT GAGGTCGGTCCAAACCGTAATCAAAGGAGAAGAAGATGCAAACGGGAGCG TTTTAAAAAAACGCTAGACACACGTCGCACTTTGTGAAATCTTTATATTT TACATGTAAAATATGTAACCACCTGATGCTTCCAAAACATAGTATTAACT TGGCACTTGTAGCGCGAAAAGTACAGGTCTACGTCGCAATTTGTACAGTA CCAACATGTGCTCGTTGTGCTTGCCCCTCTATGCATGCTCGGTGCTCGTC TATCGTCGTTCGATTCCGTGGCATTTTCTGTACCTGACCGACTCCTGCAA TTCCTTCAAAAGACCCTCGACAAGTTTTTCTCGTTTGAGGTGGAGGTAGT GGACGACACCAAGCGCTATCGGTACATCGACATCAGGTAACAAAATATCA CTAGTCTAGTCTTGCGATACGGTGTTGTATGCGCTTGCTCATACCATGTT CTGCACGAATAATGCAACCTTAAATTTCGCTTTCTTGTTCCAACACAGTT GCACATGTGATGGCTGACTGCGTGTAGCGGTTCTCCACGCTTGTATCGCT CAGAGGCGAATGGCCAGTTAGTTACTTCTGTTTCCGCACTGAAAACAAGC AAAACGGCCAGCCCCTTCCGGCTTACTTTAAGGGCAGCAGCTTCCAAGCA TGAGGAATATGGAAGCAAGCGAAAATGTTTACCGTGTACAGGTGTGACAG GAATGCCACTAAACTTCATAGCTTACCAGAAATGAATGGGAACGGTTTTT TAGTTCTTAAAAGAAGGTGATGCGTGGTCAAATGTCAAGTGGATCAGCCA TGCATGCCTCCCTCGACTGAAAAGGATCAGGGTGTGTCCTTCCCATTTAT TTTGGCGACAGTCCCCCCAAGTGGAGACGTGTACTACACCTTGCGGTGTA CTAGAGGTACACACTTTGCAGTGCATTTTTCTGTACAACTAGAACCAACC GGGGTCACACAGGAGGGGGTGAACACATAAGTGGTATGACATTTGTACGC GTGTCGTGGCGCGTGTTTACTGGTGAAAAAATCTAAGCAGGCAACACATC ATCGTCCCCCTCTTCCCTCTTTTGCTTCGTACGGTTGCCATCATCCACGA AGCAACACTCGGAGCGTAGCGGACATCGGGAGCGACCGCGCTTTCCTGCC GATGAAATTGGAAGAAGGCTGGCAACGTGTTAACATCGACCTGGAGCGCA CCGTGCGTCTAGTATTCGGCTCATCGTACCTCACGACGTCGCAGATAGTG ATCCGTGCGAGTGCACGGATCGCCAAGATCTTTTTCCAGAGCCAACCGTT TTCGGACTACGAGCTCCCCCGCCACCTTAGAGTTGTCGCGGAATAA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig2034:11627..13672+

>mRNA_L-elsbetiae_contig2034.6119.1 ID=mRNA_L-elsbetiae_contig2034.6119.1|Name=mRNA_L-elsbetiae_contig2034.6119.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1704bp|location=Sequence derived from alignment at L-elsbetiae_contig2034:11627..13672+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCTGAAAATCTCAACTCAAACCCGTCGTATGAGCACTCAAATCAGAA
TCCCGATGGGCTACACGACTCACGACAAATTGGTGATCGGCTACCTTCTG
ATTCCTGGCACATAGACGCCGTCCTTCCGCCGAATGCGGAGGAAATGGTG
TACGAAGATCTACAACCTGTAGCTGCTACCATACAAGATGGCTGAAAATC
TCAACTCAAACCCGTCGTATGAGCACTCAAATCAGAATCCCGATGGGCTA
CACGACTCACGACAAATTGGTGATCGGCTACCTTCTGATTCCTGGCACAT
AGACGCCGTCCTTCCGCCGAATGCGGAGGAAATGGTGTACGAAGATCTAC
AACCTGTAGCTGCTACCATACAAGAGTGCGATGTGCTACAAGAAGGCAAC
GAGGCCTCTGTATTCGACGACGAGGAGCTCGGGGTACAAGTTGTCGAGCT
GCTCGGGAGGAGGTGCTGCGTGGCATTTCCCTGCAGCTCCATTTTACAGC
ATTTGTGCTTGCACGTGAAGGTGAGGTCGGTCCAAACCGTAATCAAAGGA
GAAGAAGATGCAAACGGGAGCAGTGCGATGTGCTACAAGAAGGCAACGAG
GCCTCTGTATTCGACGACGAGGAGCTCGGGGTACAAGTTGTCGAGCTGCT
CGGGAGGAGGTGCTGCGTGGCATTTCCCTGCAGCTCCATTTTACAGCATT
TGTGCTTGCACGTGAAGGTGAGGTCGGTCCAAACCGTAATCAAAGGAGAA
GAAGATGCAAACGGGAGCCGCGAAAAGTACAGGTCTACGTCGCAATTTGT
ACAGTACCAACATGTGCTCGTTGTGCTTGCCCCTCTATGCATGCTCGGTG
CTCGTCTATCGTCGTTCGATTCCGTGGCATTTTCTGTACCTGACCGACTC
CTGCAATTCCTTCAAAAGACCCTCGACAAGTTTTTCTCGTTTGAGGTGGA
GGTAGTGGACGACACCAAGCGCTATCGGTACATCGACATCAGCGCGAAAA
GTACAGGTCTACGTCGCAATTTGTACAGTACCAACATGTGCTCGTTGTGC
TTGCCCCTCTATGCATGCTCGGTGCTCGTCTATCGTCGTTCGATTCCGTG
GCATTTTCTGTACCTGACCGACTCCTGCAATTCCTTCAAAAGACCCTCGA
CAAGTTTTTCTCGTTTGAGGTGGAGGTAGTGGACGACACCAAGCGCTATC
GGTACATCGACATCAGCAACACTCGGAGCGTAGCGGACATCGGGAGCGAC
CGCGCTTTCCTGCCGATGAAATTGGAAGAAGGCTGGCAACGTGTTAACAT
CGACCTGGAGCGCACCGTGCGTCTAGTATTCGGCTCATCGTACCTCACGA
CGTCGCAGATAGTGATCCGTGCGAGTGCACGGATCGCCAAGATCTTTTTC
CAGAGCCAACCGTTTTCGGACTACGAGCTCCCCCGCCACCTTAGAGTTGT
CGCGGAATAACAACACTCGGAGCGTAGCGGACATCGGGAGCGACCGCGCT
TTCCTGCCGATGAAATTGGAAGAAGGCTGGCAACGTGTTAACATCGACCT
GGAGCGCACCGTGCGTCTAGTATTCGGCTCATCGTACCTCACGACGTCGC
AGATAGTGATCCGTGCGAGTGCACGGATCGCCAAGATCTTTTTCCAGAGC
CAACCGTTTTCGGACTACGAGCTCCCCCGCCACCTTAGAGTTGTCGCGGA
ATAA
back to top