mRNA_L-elsbetiae_contig2027.6096.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig2027.6096.1 vs. uniprot
Match: D7G0Z2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z2_ECTSI) HSP 1 Score: 220 bits (561), Expect = 1.930e-72 Identity = 106/120 (88.33%), Postives = 115/120 (95.83%), Query Frame = 1 Query: 10 MEQVLFVEVGFGNDQHGQNATKACVRACRNAIEFNSIPSIKNIVPGGYAGMKLRVQLAVPVPEEEIDIDAIRSVFPYGELLPIEFQAGGMRASSGIALPEMGVDSNDDMIIAISCVTVGY 369 M+ VLFVE+GFGNDQHGQNATKACVRACRNAIEFNSIPSIKNIVPGGYAGMKLRVQLAVPV EEE+D++ I+ VFPYGELLPIEFQ+GGMRASSGIALPEMG D+NDDMI+AISCVTVGY Sbjct: 1 MDHVLFVELGFGNDQHGQNATKACVRACRNAIEFNSIPSIKNIVPGGYAGMKLRVQLAVPVAEEEVDVEEIKKVFPYGELLPIEFQSGGMRASSGIALPEMG-DTNDDMIVAISCVTVGY 119
BLAST of mRNA_L-elsbetiae_contig2027.6096.1 vs. uniprot
Match: A0A4D9D6T6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6T6_9STRA) HSP 1 Score: 174 bits (441), Expect = 6.730e-54 Identity = 83/121 (68.60%), Postives = 102/121 (84.30%), Query Frame = 1 Query: 7 GMEQVLFVEVGFGNDQHGQNATKACVRACRNAIEFNSIPSIKNIVPGGYAGMKLRVQLAVPVPEEEIDIDAIRSVFPYGELLPIEFQAGGMRASSGIALPEMGVDSNDDMIIAISCVTVGY 369 GM+Q+LFV++GFG DQHGQ+ATKA V+ACRNAIE+NS+PSI IVPGGY MK+RVQ+AVPV ID +AI+ FPYG+LLP+E Q+GGMRASSGIALP MG D NDD I+AI+ V+VG+ Sbjct: 18 GMQQLLFVQMGFGCDQHGQDATKAAVKACRNAIEWNSLPSINQIVPGGYEAMKVRVQIAVPVDATNIDTEAIKKAFPYGQLLPVEIQSGGMRASSGIALPAMG-DRNDDWIVAIAAVSVGW 137
BLAST of mRNA_L-elsbetiae_contig2027.6096.1 vs. uniprot
Match: W7TCK4_9STRA (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TCK4_9STRA) HSP 1 Score: 174 bits (441), Expect = 2.790e-53 Identity = 83/121 (68.60%), Postives = 102/121 (84.30%), Query Frame = 1 Query: 7 GMEQVLFVEVGFGNDQHGQNATKACVRACRNAIEFNSIPSIKNIVPGGYAGMKLRVQLAVPVPEEEIDIDAIRSVFPYGELLPIEFQAGGMRASSGIALPEMGVDSNDDMIIAISCVTVGY 369 GM+Q+LFV++GFG DQHGQ+ATKA V+ACRNAIE+NS+PSI IVPGGY MK+RVQ+AVPV ID +AI+ FPYG+LLP+E Q+GGMRASSGIALP MG D NDD I+AI+ V+VG+ Sbjct: 63 GMQQLLFVQMGFGCDQHGQDATKAAVKACRNAIEWNSLPSINQIVPGGYDAMKVRVQIAVPVDASNIDTEAIKKAFPYGQLLPVEIQSGGMRASSGIALPAMG-DRNDDWIVAIAAVSVGW 182
BLAST of mRNA_L-elsbetiae_contig2027.6096.1 vs. uniprot
Match: A0A7S0H8L2_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H8L2_9EUKA) HSP 1 Score: 161 bits (408), Expect = 1.390e-47 Identity = 72/121 (59.50%), Postives = 95/121 (78.51%), Query Frame = 1 Query: 7 GMEQVLFVEVGFGNDQHGQNATKACVRACRNAIEFNSIPSIKNIVPGGYAGMKLRVQLAVPVPEEEIDIDAIRSVFPYGELLPIEFQAGGMRASSGIALPEMGVDSNDDMIIAISCVTVGY 369 G ++VLFVE G G DQHGQN TKA VRACRNAIEFNS+P+++ ++PGG A MKL +QL VPV + +D+D +R VFPYG++ PI+ GG+ SG+A+ E+G D+NDDMII ++CVTVGY Sbjct: 116 GFQEVLFVECGMGCDQHGQNVTKAAVRACRNAIEFNSLPALRRLIPGGKANMKLHLQLGVPVDPKGLDLDQVRKVFPYGQMQPIQIDKGGLLGKSGVAMAELG-DTNDDMIIVVACVTVGY 235
BLAST of mRNA_L-elsbetiae_contig2027.6096.1 vs. uniprot
Match: A0A7S2TRT2_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TRT2_9EUKA) HSP 1 Score: 155 bits (391), Expect = 2.270e-46 Identity = 73/120 (60.83%), Postives = 98/120 (81.67%), Query Frame = 1 Query: 10 MEQVLFVEVGFGNDQHGQNATKACVRACRNAIEFNSIPSIKNIVPGGYAGMKLRVQLAVPVPEEEIDIDAIRSVFPYGELLPIEFQAGGMRASSGIALPEMGVDSNDDMIIAISCVTVGY 369 ++VLFVE GFG DQHGQN TKA VRACRNAIEFNS+P I+N++PGG M ++VQ+ +P PE +D++A+++VFPYG+ ++ + GG+ +SSGIALPEMG D NDDMIIA++C+TVGY Sbjct: 15 FQEVLFVECGFGCDQHGQNYTKAAVRACRNAIEFNSLPGIRNVIPGGKENMIVQVQVGIPNPEL-VDVNAVKAVFPYGKKT-VKLETGGLLSSSGIALPEMG-DKNDDMIIAVACITVGY 131
BLAST of mRNA_L-elsbetiae_contig2027.6096.1 vs. uniprot
Match: A0A7S0SHI2_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SHI2_9CHLO) HSP 1 Score: 154 bits (389), Expect = 6.070e-46 Identity = 78/122 (63.93%), Postives = 94/122 (77.05%), Query Frame = 1 Query: 7 GMEQVLFVEVGFGNDQHGQNATKACVRACRNAIEFNSIPSIKNIVPGGYAGMKLRVQLAVPVPEEEIDIDAIRSVFPYGELL-PIEFQAGGMRASSGIALPEMGVDSNDDMIIAISCVTVGY 369 GM QVLFVEVG G DQHGQ+ATKA VRACRNAIEFNSIPSI+ IVPGGY MKL +Q+ P +ID+ +R+VFPYG ++ PI+ GG+ A SGIA+PEMG D NDD +I ++ VTVGY Sbjct: 21 GMTQVLFVEVGMGADQHGQDATKAAVRACRNAIEFNSIPSIRAIVPGGYDAMKLHIQIGAPE-GAKIDLAKVRAVFPYGNIVDPIDVCVGGLLAKSGIAIPEMG-DKNDDFVICVASVTVGY 140
BLAST of mRNA_L-elsbetiae_contig2027.6096.1 vs. uniprot
Match: C1N169_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N169_MICPC) HSP 1 Score: 153 bits (387), Expect = 6.360e-46 Identity = 75/121 (61.98%), Postives = 94/121 (77.69%), Query Frame = 1 Query: 10 MEQVLFVEVGFGNDQHGQNATKACVRACRNAIEFNSIPSIKNIVPGGYAGMKLRVQLAVPVPEEEIDIDAIRSVFPYGELL-PIEFQAGGMRASSGIALPEMGVDSNDDMIIAISCVTVGY 369 M QVLFVE G G DQHGQ+ATKA VRACRNAIEFNSIPSI+ +VPGGY MKL + L VP E+D++++++VFPYG ++ P+ AGG+ A SGIA+ EMG D NDD +IA++ VTVGY Sbjct: 1 MTQVLFVECGIGADQHGQDATKAAVRACRNAIEFNSIPSIRAVVPGGYDNMKLHIHLGVPA-GHEVDLESVKAVFPYGRIVEPVRVDAGGLLAKSGIAIAEMG-DVNDDFVIAVAAVTVGY 119
BLAST of mRNA_L-elsbetiae_contig2027.6096.1 vs. uniprot
Match: A0A7S3ZZA4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZZA4_9STRA) HSP 1 Score: 155 bits (393), Expect = 1.830e-45 Identity = 80/122 (65.57%), Postives = 93/122 (76.23%), Query Frame = 1 Query: 7 GMEQVLFVEVGFGNDQHGQNATKACVRACRNAIEFNSIPSIKNIVPGGYAGMKLRVQLAVPVP-EEEIDIDAIRSVFPYGELLPIEFQAGGMRASSGIALPEMGVDSNDDMIIAISCVTVGY 369 G EQVLFVE+G+G DQHGQNATKACVRA RNAIEFNSIPSI+ +VP GY GMKL V LAVP E ID+DA+ +VFPYG + I Q GG SSGIA+P MG D D +++A+ CVTVGY Sbjct: 104 GFEQVLFVEMGWGADQHGQNATKACVRAARNAIEFNSIPSIRALVPNGYEGMKLAVDLAVPEAYHEHIDVDAVGAVFPYGAV-SIRLQPGGAEFSSGIAIPAMG-DKGDALVVALCCVTVGY 223
BLAST of mRNA_L-elsbetiae_contig2027.6096.1 vs. uniprot
Match: A0A090M2H5_OSTTA (Uncharacterized protein n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090M2H5_OSTTA) HSP 1 Score: 153 bits (386), Expect = 2.020e-45 Identity = 75/121 (61.98%), Postives = 91/121 (75.21%), Query Frame = 1 Query: 7 GMEQVLFVEVGFGNDQHGQNATKACVRACRNAIEFNSIPSIKNIVPGGYAGMKLRVQLAVPVPEEEIDIDAIRSVFPYGELLPIEFQAGGMRASSGIALPEMGVDSNDDMIIAISCVTVGY 369 GME VLF E GFG DQHGQ+ATKA +RACRNAIEFNSIPSI+ IVPGGY GMK+ V L VP +D DA+R FPYGE+LP+ GG+R S IA+PE G D+NDD ++ ++ V+VGY Sbjct: 27 GMESVLFSECGFGADQHGQDATKAALRACRNAIEFNSIPSIREIVPGGYEGMKIHVHLGVPR-GASVDRDAVRDSFPYGEVLPVVVDDGGLRTRSWIAIPEQG-DANDDFLVCVANVSVGY 145
BLAST of mRNA_L-elsbetiae_contig2027.6096.1 vs. uniprot
Match: A0A7R9T124_9CHLO (Hypothetical protein n=2 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A0A7R9T124_9CHLO) HSP 1 Score: 154 bits (388), Expect = 2.100e-45 Identity = 71/121 (58.68%), Postives = 92/121 (76.03%), Query Frame = 1 Query: 7 GMEQVLFVEVGFGNDQHGQNATKACVRACRNAIEFNSIPSIKNIVPGGYAGMKLRVQLAVPVPEEEIDIDAIRSVFPYGELLPIEFQAGGMRASSGIALPEMGVDSNDDMIIAISCVTVGY 369 G E+ LF E GFG DQHGQ+ATKA VRACRNAIEFNS+PS++ +VPGGYA MK+ VQL VP ++D +R VFPYGE++ ++ GG+RA S I++P G D+NDD +I ++CVTVGY Sbjct: 51 GFERALFAECGFGADQHGQDATKAAVRACRNAIEFNSVPSVRAVVPGGYAKMKIHVQLGVPE-NAKVDAGRVREVFPYGEVVDVQIDTGGLRARSWISIPAQG-DANDDFLICVACVTVGY 169 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2027.6096.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig2027.6096.1 >prot_L-elsbetiae_contig2027.6096.1 ID=prot_L-elsbetiae_contig2027.6096.1|Name=mRNA_L-elsbetiae_contig2027.6096.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=121bp MEQVLFVEVGFGNDQHGQNATKACVRACRNAIEFNSIPSIKNIVPGGYAGback to top mRNA from alignment at L-elsbetiae_contig2027:14336..15767- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig2027.6096.1 ID=mRNA_L-elsbetiae_contig2027.6096.1|Name=mRNA_L-elsbetiae_contig2027.6096.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1432bp|location=Sequence derived from alignment at L-elsbetiae_contig2027:14336..15767- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig2027:14336..15767- >mRNA_L-elsbetiae_contig2027.6096.1 ID=mRNA_L-elsbetiae_contig2027.6096.1|Name=mRNA_L-elsbetiae_contig2027.6096.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=726bp|location=Sequence derived from alignment at L-elsbetiae_contig2027:14336..15767- (Laminarionema elsbetiae ELsaHSoW15)back to top |