mRNA_L-elsbetiae_contig19831.5930.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig19831.5930.1
Unique NamemRNA_L-elsbetiae_contig19831.5930.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig19831.5930.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE)

HSP 1 Score: 210 bits (534), Expect = 1.000e-59
Identity = 208/428 (48.60%), Postives = 257/428 (60.05%), Query Frame = 2
Query:   29 QWPRGPENELHRAARDGSVERTVAVISRGAVDIDQGGMRGFTALTIAAHLGYSRVVRILVNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-DPLLT-YSSRSGEALLPLDVAAQDGRLEVANELIQEYGIKGCGGVSGGVNALQRAAQNQHVKMMGMLTKAGVVDTGIALAAAAVCGRESSVKFLLQQQEQKTSGQRAGYLGIA--GFSTPPLFCSVLACRPCSPRVTRLLVDAGADTTTAVQLKMR-GGVTFNGTPLALADHNLSTRKSTDAAG----DQLHILEGTRRLLLRVEAVHAVSWLWTRDALPVTHSAAEGTGKATKMTPTPLISMLPILKRRAGRPRVLLAALFRW 1285
            Q PRGP N LH AA  GS E T  V++ GA DIDQG   G+TAL +A+  GY+R+V +++NK       XXXXXXXXXXXXXXXXXXXXXXXXXXXX           XXXXXXXXXXXXXXXXXXXXXXX                                 DPLLT     SG   LPLD AA++G  EV NELI++ GI GCGG SGGV ALQ+AAQ +++ +M +LT AGVVDTG+AL  AA  G E+ +KFLL+Q   + +   A Y+     G  TP L+      +   PRV RLLV+AGADTT+ V ++ + GG   + TPL L  + +  +      G    +QLH LE  RRLLLRVEAVHAVSWLW  D   +T +AA GT + T ++    + ML + +RRA   +V LAAL R+
Sbjct:    9 QRPRGPSNRLHAAAECGSFEATATVLASGAFDIDQGNEYGWTALMLASRGGYARIVGMILNKGAQVSITXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVEATTTQHLCXXXXXXXXXXXXXXXXXXXXXXXNLNSRRSDGATPLYTAAWKGNVDAARLLLLAKADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNTRDRGGVTPLLW----GIQHYRPRVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTDRTTAISTAVTLPML-VTRRRARGRKVPLAALLRY 431          
BLAST of mRNA_L-elsbetiae_contig19831.5930.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE)

HSP 1 Score: 209 bits (531), Expect = 4.180e-59
Identity = 186/425 (43.76%), Postives = 229/425 (53.88%), Query Frame = 2
Query:   29 QWPRGPENELHRAARDGSVERTVAVISRGAVDIDQGGMRGFTALTIAAHLGYSRVVRILVNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-DPLLTYSSRSG-EALLPLDVAAQDGRLEVANELIQEYGIKGCGGVSGGVNALQRAAQNQHVKMMGMLTKAGVVDTGIALAAAAVCGRESSVKFLLQQQEQKTSGQRAGYLG-IAGFSTPPLFCSVLACRPCSPRVTRLLVDAGADTTTAVQL-KMRGGVTFNGTPLALADHNLSTRKSTDAAGDQLHILEGTRRLLLRVEAVHAVSWLWTRDALPVTHSAAEGTGK--ATKMTPTPLISMLPILKRRAGRPRVLLAALFRW 1285
            QWP GP N L  AA  GS +    +++ GA DIDQG   G+T L +A+  GY R+VR+L+NK        XXXXXXXXXXXXXXXXXXXXXXXXXX                                                                    DPLLT +S SG E  LPLDVAAQ+G  EV NELI++ GI GCGG SGG NAL++AA    + +M +LT AGVVDTG+AL  AA  G E+ +KFLL+Q   + S  RA Y+  + G     L   +  CRP   RV +LLV+AGADTT+ V +    G   F+ TPL L    L  R +     ++ + LE  RRLLLR EAVHAVSWLW  D   +TH+ A+GTG+  AT    TP I ML I +R  GR + LLAAL R+
Sbjct:    9 QWPHGPSNPLQAAADCGSFKTAANLLASGAFDIDQGNEVGWTPLMMASRGGYPRIVRMLLNKGAQVWVTDXXXXXXXXXXXXXXXXXXXXXXXXXXALLDAATKQNHCTPLDCAAETGCAASVTALLKAGSNINTRRSDGATPLYTAAWNGNVVAVWLLLLAKADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGRKSTDRAAYMNTLNGVGLTSLLDGIQRCRP---RVVQLLVEAGADTTSPVLICNQPGEDDFHITPLGLTMCLLGGRSAKPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFI-MLMIGRRTRGR-KGLLAALLRY 428          
BLAST of mRNA_L-elsbetiae_contig19831.5930.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI)

HSP 1 Score: 196 bits (498), Expect = 1.620e-54
Identity = 234/421 (55.58%), Postives = 278/421 (66.03%), Query Frame = 2
Query:   38 RGPENELHRAARDGSVERTVAVISRGAVDIDQGGMRGFTALTIAAHLGYSRVVRILVNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPLLTYSSRSGEALLPLDVAAQDGRLEVANELIQEYGIKGCGGVSGGVNALQRAAQNQHVKMMGMLTKAGVVDTGIALAAAAVCGRESSVKFLLQQQEQKTSGQRAGYLGIAGFSTPPLFCSVLACRPCSPRVTRLLVDAGADTTTAVQLKMRGGVTFNGTPLALADHNLSTRKSTD--AAGDQLHILEGTRRLLLRVEAVHAVSWLWTRDALPVTHSAAEGTGKATKMTPT----PLISMLPILKRRAGRPRVLLAALFR 1282
            RGP NELH+AA DGS +RT ++++ G +DIDQG  RG+T L  AA  G+S V+++L+N+            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PLL     SG   +PLD AA +G L VA EL+Q +GI+GC G S GV+AL +AA +QH+ +M +L  AGVVDTG AL A    GRE ++KFLL+Q+ + T+          G    PL  +V    PCSPRV RLLVDAGAD T AV++    G +   TPL  A   L+ +   +  A   QL  L  +RRLLL+VE VHA SWLW   A           GK    T +    PL S LPI+ RR+ R    L  +FR
Sbjct:    9 RGPRNELHKAALDGSSQRTESLLAGGRIDIDQGDPRGWTPLMFAAEEGHSNVIKVLLNRGASLLPVDDDDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLLPTRMSSGNTFVPLDGAALNGHLAVARELVQRFGIRGCAGASAGVDALGQAAVDQHLDVMALLCDAGVVDTGNALVATVFLGRERALKFLLEQKGEGTARTTYASTPRDGRGHTPLLSAVTT-GPCSPRVVRLLVDAGADATLAVRVPDGFGRSTKYTPLDCATRCLAEKVVDEDFATAQQLRNLRASRRLLLQVEVVHATSWLWGGHA-----GCPAAPGKKRAQTESTNGKPLKSRLPIMWRRSARRGAALPGVFR 423          
BLAST of mRNA_L-elsbetiae_contig19831.5930.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI)

HSP 1 Score: 185 bits (470), Expect = 1.190e-50
Identity = 123/265 (46.42%), Postives = 168/265 (63.40%), Query Frame = 2
Query:  518 DPLLTYSSRS-GEALLPLDVAAQDGRLEVANELIQEYGIKGCGGVSGGVNALQRAAQNQHVKMMGMLTKAGVVD-TGIALAAAAVCGRESSVKFLLQQQEQKTSGQRAGYLGIA----GFSTPPLFCSVLACRPCSPRVTRLLVDAGADTTTAVQLKMRGGVT-FNGTPLALADHNLSTRKSTD--AAGDQLHILEGTRRLLLRVEAVHAVSWLWTRDALPVTHSAAEGTGKATKMTPTPLISMLPILKRRAGRPRVLLAALFRW 1285
            +PLLT+SS S G + +PL+VAAQ GR  V +EL++E+GI+ CGG SGG++AL+ AA    V +M ML  AGVVD  G+AL AA   G+E++V FLL+QQE++    +  Y+ IA    G +           +PC+PR+TR LVDAGADTT+AVQL+ +   T  N TPL   +       + D  A  +QL  LE TRR+LLRV AVHAVSW+W  DA  +   A   + +  K +PT L ++LP+L+RRAGR  +L   LFR+
Sbjct:  143 NPLLTWSSESSGRSFVPLEVAAQTGRSAVVSELLREFGIRCCGGPSGGLDALRVAAVYGQVDIMSMLMDAGVVDPVGLALLAAVGSGKEAAVGFLLRQQEERW---QTSYVNIARDDDGLTALLWSFRGNKNKPCNPRITRRLVDAGADTTSAVQLRAKRSRTCVNVTPLEYVNDWALRETNGDHPATDEQLLRLEATRRVLLRVVAVHAVSWIWPSDAPLLARPA--NSPRTAKHSPTQLTTVLPVLRRRAGRRALLWDTLFRY 402          
BLAST of mRNA_L-elsbetiae_contig19831.5930.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI)

HSP 1 Score: 187 bits (476), Expect = 2.080e-50
Identity = 164/429 (38.23%), Postives = 208/429 (48.48%), Query Frame = 2
Query:   50 NELHRAARDGSVERTVAVISRGAVDIDQGGMRGFTALTIAAHLGYSRVVRILVNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD--PLLTYSSRSGEAL-LPLDVAAQDGRLEVANELIQEYGIKGCGGVSGGVNALQRAAQNQHVKMMGMLTKAGVVDTGIALAAAAVCGRESSVKFLLQQQEQKTS-GQRAGYLG---IAGFSTPPLFCSVLACRPCSPRVTRLLVDAGADTTTAVQ-LKMRGGVTFNGTPLALADHNLSTRKSTD---AAGDQLHILEGTRRLLLRVEAVHAVSWLWTRDALPVTHSAAEGTGKATKMTPTP----LISMLPILKRRAGRPRVLLAALFRWVV 1291
            N+LHRA   GS E T AV++ G V+IDQ    G T L +A H G+SR+ ++L+ K                                                         XXXXXXXXXXXXX                               +  PLL  +S  G    +PLD+AA+ G  +V  ELIQE GI+GC   S G +AL  AA NQH+ +M +LT+AGVVDTG AL  AA  G E+SVKFLL+ + ++   G    YL    + G++  PL      C   +PR+ R+LVDAGADTT+ VQ + ++GGV FN TPLA     L  +   D   A  + L  LE   RLLLRV+AVHAVSWLW         S A   G+AT+  P P    L  MLPILKRR  R   L+A L R+ V
Sbjct:  107 NQLHRAVLVGSAELTQAVLAGGTVEIDQRNSYGATPLMMAVHNGHSRIAKMLIKKGANVSIADKRGFTALHFCCAREEDDAIVKLLAKAGADLDAIIPGEGSAPLHRATHHEXXXXXXXXXXXXXNPDCQLPDGSTALHIAAEEGQVAVMRELLRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLNARDVNGYT--PLVVCTQGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWP--------SGAPFIGRATETDPEPPLPALKLMLPILKRRTKRRCGLVATLLRYSV 525          
BLAST of mRNA_L-elsbetiae_contig19831.5930.1 vs. uniprot
Match: D7FY91_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY91_ECTSI)

HSP 1 Score: 186 bits (473), Expect = 3.770e-50
Identity = 228/427 (53.40%), Postives = 272/427 (63.70%), Query Frame = 2
Query:   20 PSRQWPRGPENELHRAARDGSVERTVAVIS-RGAVDIDQGGMRGFTALTIAAHLGYSRVVRILVNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPLL--TYSSRSGEALLPLDVAAQDGRLEVANELIQEYGIKGCGGVSGGVNALQRAAQNQHVKMMGMLTKAGVVDTGIALAAAAVCGRESSVKFLLQQQEQKTSGQRAGYLG-IAGFSTPPLFCSVLACRPCSPRVTRLLVDAGADTTTAVQLKMRGGVTFNGTP-LALADHNLSTRKSTDAAGDQLHILEGTRRLLLRVEAVHAVSWLWTRDALPVTHSAAEGTGKATKMTPTPLISMLPILKRRAGRPRVLLAALFRW 1285
            P++ WPRGP NELH AA DGS ER +A++S R  +D++QG   G T L +A   G+ RVVRIL+N                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  DPLL     S  G   LPLDVA       V  EL+Q  GI+ CGG S GV+AL  A   +HV ++ ML  AGVVD G ALAAAA  G E+SVKFLL+Q E K S  R+ Y+  +  F   PL  ++  C  CS R+ RLLVDAGADTT A +L  + G     T  L      L  +K+    G++ H L+ T RLLL+VEA HA+SW+W     P    + +   +  +    P+   LP+ +R  G  R LL A+ R+
Sbjct:    6 PTQGWPRGPMNELHLAAMDGSAERALALLSSRDPIDVNQGDSAGCTPLMLATTNGHPRVVRILLNHGANMSIMDDVGSDALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNADPLLGNVLPSTGGVCFLPLDVAXXXXXSAVVRELLQRLGIERCGGESRGVDALCLAVTGRHVGIVAMLAHAGVVDQGSALAAAAAQGYEASVKFLLRQHEGKHSASRSAYVNKLNRFGLTPLLENI-TCGHCSARIVRLLVDAGADTTAAYRLTGKKGQAMAATTHLTAMGCLLLEKKAKGDTGEEPHNLQATFRLLLQVEAAHAISWVW-----PTGSHSVDRPPRRQRRAEAPVRLTLPMTRRDTGTRRALLGAVSRY 426          
BLAST of mRNA_L-elsbetiae_contig19831.5930.1 vs. uniprot
Match: D7G1U9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI)

HSP 1 Score: 178 bits (452), Expect = 1.040e-47
Identity = 226/432 (52.31%), Postives = 273/432 (63.19%), Query Frame = 2
Query:    8 MAVHPSRQWPRGPENELHRAARDGSVERTVAVISRGAVDIDQGGMRGFTALTIAAHLGYSRVVRILVNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPLLTYSSRSGEALLPLDVAAQDGRLEVANELIQEYGIKGCGGVSGGVNALQRAAQNQHVKMMGMLTKAGVVDTGIALAAAAVCGRESSVKFLLQQQEQKTSGQRAGYLG--IAGFSTPPLFCSVLACRPCSPRVTRLLVDAGADTTTAVQLKMRGG-VTFNGTPLALADHNLSTRK--STDAAGDQLHILEGTRRLLLRVEAVHAVSWLWTRDALPVTHS--AAEGTGKATKMTPTPLISMLPILKRRAGRPRVLLAALFR 1282
            +AV  S+ WPRGP N+LH+AA  GS +R  A++S G+VDI+QG  +G+T L +A   G+S V + L+ K          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                      +  Q G  EV  ELIQ+ G++GCGGVS GV +L+ AA  Q+V +MG+LT  GVVDTG AL  AA   RE SVKFLLQ Q    +G    Y+   +  F   PL C++ AC   SPR+ R L+D GADT + V +   G   T   TPL  A  +L   K    +A  +QL  L+   RLL ++EAVHAVSWLW     P+ H+  AA    K T   PT L  M  +L+   G+  V+L A++R
Sbjct:   20 LAVSTSQLWPRGPTNQLHKAAYHGSADRVDALLSTGSVDINQGNPKGWTPLMLATEKGHSLVAKSLLEKGANVSVAGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------LQKQHGHSEVVRELIQQLGVRGCGGVSAGVESLRLAATEQYVDIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQHQ----AGGGTWYVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDDGADTKSTVLVTRSGEWTTSRDTPLGFATRSLRQNKVGGKNATEEQLRSLKAIHRLLSQIEAVHAVSWLWRSSDTPIGHAVGAASSRMKPTTAGPT-LKRMSTVLRTTVGKRGVVLRAVYR 424          
BLAST of mRNA_L-elsbetiae_contig19831.5930.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI)

HSP 1 Score: 175 bits (443), Expect = 1.960e-46
Identity = 240/430 (55.81%), Postives = 284/430 (66.05%), Query Frame = 2
Query:   29 QWPRGPENELHRAARDGSVERTVAVIS-RGAVDIDQGGMRGFTALTIAAHLGYSRVVRILVNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPLLTYSSRSGEALLPLDVAAQDGRLEVANELIQEYGIKGCGGVSGGVNALQRAAQNQHVKMMGMLTKAG-VVDTGIALAAAAVCGRESSVKFLLQQQEQKTSGQRAGYLGIAGFSTPPLFCSVL--ACRPCSPRVTRLLVDAGADTTTAV---QLKMRGGVTFNGTPLALADHNLSTRKSTDAAG--DQLHILEGTRRLLLRVEAVHAVSWLWTRDALPVTHSAAEGTGKATKMTP--TPLISMLPILKRRAGRPRVLLAALFRW 1285
            Q  RGP N LH+AA DGSVE T A++S RGA DID G     TAL IA   GY+ VV  L++K     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       +PLL   +  G + +PL++AA  G  +VA E+I++ GI+GCGG SGGV AL++AA  +H++ M +L  AG VVDTG AL  AA  GR  +VKFLL++++        G     G +  P+ C+V   A R CSP++ RLLVDAGA+TT AV   ++  R   T   TPLA     L   +    A   +QL  L+ TR LL R EAVHAVSWLW     P    AA  T   T  T   TPL +M P+L+R+ G   VLL  LFR+
Sbjct:    6 QVTRGPMNALHKAAWDGSVEMTGAILSSRGAPDIDLGNPSAATALMIATVKGYAGVVNALLSKGANVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLRAKANPLLCSHTPMGVSYVPLEMAALHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLRRRQADADAYVNGTRDPYGRT--PVMCAVDVGAGRLCSPKIVRLLVDAGANTTRAVGVTRITPRWEKTSE-TPLAFTTRLLREGRVDGEAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPPRIAQAAGDTKTETASTAVATPLRAMSPMLRRKPGTRGVLLKTLFRY 432          
BLAST of mRNA_L-elsbetiae_contig19831.5930.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI)

HSP 1 Score: 175 bits (443), Expect = 2.270e-46
Identity = 224/432 (51.85%), Postives = 269/432 (62.27%), Query Frame = 2
Query:   29 QWPRGPENELHRAARDGSVERTVAVISRGAVDIDQGGMRGFTALTIAAHLGYSRVVRILVNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPLLTYSSRSGEALLPLDVAAQDGRLEVANELIQEYGIKGCGGVSGGVNALQRAAQNQHVKMMGMLTKAGVVDTGIALAAAAVCGRESSVKFLLQQQEQKTSGQRAGYLGIAG--FSTPPLFCSVLAC--RPCSPRVTRLLVDAGADTTTAVQLKMRGG-VTFNGTPLALADHNLSTRKSTDAA--GDQLHILEGTRRLLLRVEAVHAVSWLWT----RDALPVTHSAAEGTGKATKMTPTPLISMLPILKRRAGRPRVLLAALFRWVV 1291
            Q PR   N+LH AARDGS   T A++S G++DID G   G T L  A    +  VV IL++K                         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    +PLLT  + + + L PLD AAQ+GRL V  EL+Q +GI+GCGG +GGV ALQ AA   H+ +M  LT AGVVDTGIAL  A   G    VKFLLQQQ   T  +++ Y+          PL C++     + CSP+V RLLVDAGADTT+ V+  ++ G +    TPL+LA   L  + +   A   + L  LE  RRLLLRVEAVHA SWLW     R  LP   +AA  T  ++   P  L ++LPIL+RRA     + A+L R+ V
Sbjct:    9 QSPRVVINKLHEAARDGSTWLTAAILSTGSIDIDGGDSSGGTPLMHAICNDHPSVVSILLSKGASVSAINDEGNTALHLSAFAGYVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLTRVNLAWQHL-PLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQNG-TPSEKSAYVSRPRDPCGRTPLICNIDVGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLPVVCTPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAPQ-LRTVLPILRRRARGRGFVSASLCRYAV 437          
BLAST of mRNA_L-elsbetiae_contig19831.5930.1 vs. uniprot
Match: A0A6H5K037_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K037_9PHAE)

HSP 1 Score: 167 bits (422), Expect = 1.360e-43
Identity = 114/263 (43.35%), Postives = 150/263 (57.03%), Query Frame = 2
Query:  524 LLTYSSRSGEALLPLDVAAQDGRLEVANELIQEYGIKGCGGVSGGVNALQRAAQNQHVKMMGMLTKAGVVDTGIALAAAAVCGRESSVKFLLQQQEQKTSGQRAGYLG--IAGFSTPPLFCSVLACRPCSPRVTRLLVDAGADTTTAVQLKMRGG-VTFNGTPLALADHNLSTRK--STDAAGDQLHILEGTRRLLLRVEAVHAVSWLWTRDALPVTHSAAEGTGKATKMTPT---PLISMLP-ILKRRAG-RPRVLLAALFR 1282
            L +  + SG   +PLDVA Q G  EV  EL  + G++GCGGVSGGV +L+ A   Q V +MG+LT  GVVDTG AL  AA   RE SVKFLLQ Q    +G  A Y+   +  F   PL C++ AC   SPR+ R L+DA ADT + V +   G   T   TPL  A H+L   K    +A  +QL  L+   RLL +V+AVHAVSWLW        +S A G   +++M PT   PL+  +P +L+   G R  V+L A++R
Sbjct:  160 LASVPAPSGATFVPLDVAVQHGHSEVVRELTHQLGVRGCGGVSGGVESLRLATTEQDVDIMGILTVGGVVDTGRALVVAAENSREESVKFLLQHQ----AGGGAWYVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDAEADTKSTVLVTKSGQWTTSRDTPLGFATHSLRQNKVGRKNATEEQLRSLKAIHRLLSQVDAVHAVSWLWRSS--DTRNSYAVGAA-SSRMKPTIAGPLLKRMPTVLRTTVGKRGVVVLRAVYR 415          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19831.5930.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJA9_9PHAE1.000e-5948.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQV0_9PHAE4.180e-5943.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LL76_ECTSI1.620e-5455.58EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FVU3_ECTSI1.190e-5046.42EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7FT11_ECTSI2.080e-5038.23EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7FY91_ECTSI3.770e-5053.40EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY... [more]
D7G1U9_ECTSI1.040e-4752.31EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7G1H7_ECTSI1.960e-4655.81EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1... [more]
D7FVK3_ECTSI2.270e-4651.85EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5K037_9PHAE1.360e-4343.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig19831contigL-elsbetiae_contig19831:881..2171 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score199.9
Seed ortholog evalue2.4e-48
Seed eggNOG ortholog2880.D8LL76
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size1291
Cds size1284
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815821.0996282-UTR-L-elsbetiae_contig19831:880..8871622815821.0996282-UTR-L-elsbetiae_contig19831:880..887Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig19831 881..887 +
1691683124.6751359-UTR-L-elsbetiae_contig19831:880..8871691683124.6751359-UTR-L-elsbetiae_contig19831:880..887Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig19831 881..887 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815821.1108196-CDS-L-elsbetiae_contig19831:887..21711622815821.1108196-CDS-L-elsbetiae_contig19831:887..2171Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19831 888..2171 +
1691683124.688007-CDS-L-elsbetiae_contig19831:887..21711691683124.688007-CDS-L-elsbetiae_contig19831:887..2171Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19831 888..2171 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig19831.5930.1prot_L-elsbetiae_contig19831.5930.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig19831 888..2171 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig19831.5930.1

>prot_L-elsbetiae_contig19831.5930.1 ID=prot_L-elsbetiae_contig19831.5930.1|Name=mRNA_L-elsbetiae_contig19831.5930.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=428bp
MAVHPSRQWPRGPENELHRAARDGSVERTVAVISRGAVDIDQGGMRGFTA
LTIAAHLGYSRVVRILVNKGANVSIAGNEGFAALHFSALEGHLAVTKLLV
KAGADLEAKHDTGATPLDMAAKEGHLEVMGVLIEAGASPNNRRSDGSTPL
YGAAQDENMAVIKVLLRAKADPLLTYSSRSGEALLPLDVAAQDGRLEVAN
ELIQEYGIKGCGGVSGGVNALQRAAQNQHVKMMGMLTKAGVVDTGIALAA
AAVCGRESSVKFLLQQQEQKTSGQRAGYLGIAGFSTPPLFCSVLACRPCS
PRVTRLLVDAGADTTTAVQLKMRGGVTFNGTPLALADHNLSTRKSTDAAG
DQLHILEGTRRLLLRVEAVHAVSWLWTRDALPVTHSAAEGTGKATKMTPT
PLISMLPILKRRAGRPRVLLAALFRWVV
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mRNA from alignment at L-elsbetiae_contig19831:881..2171+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig19831.5930.1 ID=mRNA_L-elsbetiae_contig19831.5930.1|Name=mRNA_L-elsbetiae_contig19831.5930.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1291bp|location=Sequence derived from alignment at L-elsbetiae_contig19831:881..2171+ (Laminarionema elsbetiae ELsaHSoW15)
GTCGCACATGGCGGTTCATCCCTCGCGACAGTGGCCCCGAGGCCCTGAGA ATGAACTGCATCGTGCCGCGCGTGATGGTTCCGTCGAGCGCACCGTAGCC GTGATCTCGAGGGGGGCGGTGGACATCGATCAGGGCGGAATGCGAGGATT TACTGCTCTCACGATTGCGGCCCACTTGGGCTACTCGCGAGTTGTCAGGA TCCTTGTGAACAAGGGAGCCAACGTGTCAATTGCCGGCAATGAAGGTTTT GCCGCTCTGCACTTTTCGGCTTTAGAAGGACACCTGGCCGTGACAAAGCT GTTGGTAAAGGCCGGCGCAGACCTAGAAGCAAAGCACGATACCGGCGCCA CACCACTCGACATGGCTGCGAAAGAAGGGCACCTGGAGGTTATGGGAGTG CTCATCGAGGCAGGAGCGAGTCCCAACAACCGTAGGTCGGACGGCTCCAC ACCGCTGTATGGCGCGGCTCAGGACGAGAACATGGCTGTGATCAAGGTGC TCCTTCGTGCGAAAGCGGATCCGCTGTTGACCTATTCGAGTCGGTCGGGC GAGGCTCTTCTCCCTCTGGACGTGGCGGCGCAGGATGGGCGCTTGGAGGT GGCAAATGAGCTGATCCAGGAGTATGGGATCAAAGGTTGTGGCGGTGTAA GCGGTGGTGTAAATGCTCTCCAGAGGGCCGCCCAGAACCAGCATGTGAAG ATGATGGGTATGTTGACCAAGGCCGGGGTGGTCGATACGGGCATAGCCTT GGCCGCCGCCGCCGTCTGTGGGCGCGAGTCATCCGTGAAGTTTCTGTTGC AGCAGCAGGAGCAGAAAACTAGCGGTCAACGAGCTGGGTACCTAGGCATC GCCGGTTTCAGTACACCGCCCTTGTTTTGTAGTGTTCTGGCTTGCCGCCC ATGCTCTCCCAGAGTCACGAGGCTGCTCGTGGATGCAGGAGCGGACACTA CGACGGCCGTTCAACTCAAAATGAGGGGTGGTGTGACTTTTAACGGCACA CCCCTTGCTCTCGCGGACCATAACCTTAGCACTCGTAAAAGCACGGACGC TGCAGGGGATCAGCTGCACATCCTGGAGGGTACCCGACGGTTGCTGTTGA GGGTGGAGGCCGTTCATGCAGTATCTTGGCTGTGGACAAGGGACGCTCTC CCTGTCACCCATAGTGCTGCAGAAGGTACAGGCAAGGCTACCAAGATGAC TCCGACCCCGCTGATTTCGATGCTGCCGATCTTGAAGCGAAGGGCTGGAA GGCCGAGAGTGCTCTTGGCGGCCCTGTTCAGGTGGGTGGTG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig19831:881..2171+

>mRNA_L-elsbetiae_contig19831.5930.1 ID=mRNA_L-elsbetiae_contig19831.5930.1|Name=mRNA_L-elsbetiae_contig19831.5930.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2568bp|location=Sequence derived from alignment at L-elsbetiae_contig19831:881..2171+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCGGTTCATCCCTCGCGACAGTGGCCCCGAGGCCCTGAGAATGAACT
GCATCGTGCCGCGCGTGATGGTTCCGTCGAGCGCACCGTAGCCGTGATCT
CGAGGGGGGCGGTGGACATCGATCAGGGCGGAATGCGAGGATTTACTGCT
CTCACGATTGCGGCCCACTTGGGCTACTCGCGAGTTGTCAGGATCCTTGT
GAACAAGGGAGCCAACGTGTCAATTGCCGGCAATGAAGGTTTTGCCGCTC
TGCACTTTTCGGCTTTAGAAGGACACCTGGCCGTGACAAAGCTGTTGGTA
AAGGCCGGCGCAGACCTAGAAGCAAAGCACGATACCGGCGCCACACCACT
CGACATGGCTGCGAAAGAAGGGCACCTGGAGGTTATGGGAGTGCTCATCG
AGGCAGGAGCGAGTCCCAACAACCGTAGGTCGGACGGCTCCACACCGCTG
TATGGCGCGGCTCAGGACGAGAACATGGCTGTGATCAAGGTGCTCCTTCG
TGCGAAAGCGGATCCGCTGTTGACCTATTCGAGTCGGTCGGGCGAGGCTC
TTCTCCCTCTGGACGTGGCGGCGCAGGATGGGCGCTTGGAGGTGGCAAAT
GAGCTGATCCAGGAGTATGGGATCAAAGGTTGTGGCGGTGTAAGCGGTGG
TGTAAATGCTCTCCAGAGGGCCGCCCAGAACCAGCATGTGAAGATGATGG
GTATGTTGACCAAGGCCGGGGTGGTCGATACGGGCATAGCCTTGGCCGCC
GCCGCCGTCTGTGGGCGCGAGTCATCCGTGAAGTTTCTGTTGCAGCAGCA
GGAGCAGAAAACTAGCGGTCAACGAGCTGGGTACCTAGGCATCGCCGGTT
TCAGTACACCGCCCTTGTTTTGTAGTGTTCTGGCTTGCCGCCCATGCTCT
CCCAGAGTCACGAGGCTGCTCGTGGATGCAGGAGCGGACACTACGACGGC
CGTTCAACTCAAAATGAGGGGTGGTGTGACTTTTAACGGCACACCCCTTG
CTCTCGCGGACCATAACCTTAGCACTCGTAAAAGCACGGACGCTGCAGGG
GATCAGCTGCACATCCTGGAGGGTACCCGACGGTTGCTGTTGAGGGTGGA
GGCCGTTCATGCAGTATCTTGGCTGTGGACAAGGGACGCTCTCCCTGTCA
CCCATAGTGCTGCAGAAGGTACAGGCAAGGCTACCAAGATGACTCCGACC
CCGCTGATTTCGATGCTGCCGATCTTGAAGCGAAGGGCTGGAAGGCCGAG
AGTGCTCTTGGCGGCCCTGTTCAGGTGGGTGGTGATGGCGGTTCATCCCT
CGCGACAGTGGCCCCGAGGCCCTGAGAATGAACTGCATCGTGCCGCGCGT
GATGGTTCCGTCGAGCGCACCGTAGCCGTGATCTCGAGGGGGGCGGTGGA
CATCGATCAGGGCGGAATGCGAGGATTTACTGCTCTCACGATTGCGGCCC
ACTTGGGCTACTCGCGAGTTGTCAGGATCCTTGTGAACAAGGGAGCCAAC
GTGTCAATTGCCGGCAATGAAGGTTTTGCCGCTCTGCACTTTTCGGCTTT
AGAAGGACACCTGGCCGTGACAAAGCTGTTGGTAAAGGCCGGCGCAGACC
TAGAAGCAAAGCACGATACCGGCGCCACACCACTCGACATGGCTGCGAAA
GAAGGGCACCTGGAGGTTATGGGAGTGCTCATCGAGGCAGGAGCGAGTCC
CAACAACCGTAGGTCGGACGGCTCCACACCGCTGTATGGCGCGGCTCAGG
ACGAGAACATGGCTGTGATCAAGGTGCTCCTTCGTGCGAAAGCGGATCCG
CTGTTGACCTATTCGAGTCGGTCGGGCGAGGCTCTTCTCCCTCTGGACGT
GGCGGCGCAGGATGGGCGCTTGGAGGTGGCAAATGAGCTGATCCAGGAGT
ATGGGATCAAAGGTTGTGGCGGTGTAAGCGGTGGTGTAAATGCTCTCCAG
AGGGCCGCCCAGAACCAGCATGTGAAGATGATGGGTATGTTGACCAAGGC
CGGGGTGGTCGATACGGGCATAGCCTTGGCCGCCGCCGCCGTCTGTGGGC
GCGAGTCATCCGTGAAGTTTCTGTTGCAGCAGCAGGAGCAGAAAACTAGC
GGTCAACGAGCTGGGTACCTAGGCATCGCCGGTTTCAGTACACCGCCCTT
GTTTTGTAGTGTTCTGGCTTGCCGCCCATGCTCTCCCAGAGTCACGAGGC
TGCTCGTGGATGCAGGAGCGGACACTACGACGGCCGTTCAACTCAAAATG
AGGGGTGGTGTGACTTTTAACGGCACACCCCTTGCTCTCGCGGACCATAA
CCTTAGCACTCGTAAAAGCACGGACGCTGCAGGGGATCAGCTGCACATCC
TGGAGGGTACCCGACGGTTGCTGTTGAGGGTGGAGGCCGTTCATGCAGTA
TCTTGGCTGTGGACAAGGGACGCTCTCCCTGTCACCCATAGTGCTGCAGA
AGGTACAGGCAAGGCTACCAAGATGACTCCGACCCCGCTGATTTCGATGC
TGCCGATCTTGAAGCGAAGGGCTGGAAGGCCGAGAGTGCTCTTGGCGGCC
CTGTTCAGGTGGGTGGTG
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