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|
Homology
BLAST of mRNA_L-elsbetiae_contig1982.5923.1 vs. uniprot
Match: D8LNI8_ECTSI (EsV-1-8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNI8_ECTSI) HSP 1 Score: 171 bits (432), Expect = 6.310e-45 Identity = 108/196 (55.10%), Postives = 126/196 (64.29%), Query Frame = 2
Query: 755 QGAVEIVDHLLRAGADETIADNRGNKPADAVGLEKRMYRLEGDLWVEDENRAHELLANAPADRAWRRRGWLVMLRSRDSKAKAGKCCSNG---HGAGTKDEGSETAKREDIEDVEYD-PRKTNNGVDGELETEAVGGVIDRAAGLIGLETDGAMGTANNDGSVVGAEGGQEGLRLEVLLLLGLGLEGVFRTVVGFL 1330
+G VD LLR GADET + G PAD +G ++ +R LL+ APADRAWRRRGWLVMLRSRDSKA+ GKC S+G HG G + GSE A+ E + +Y P T NG GE+E V D AAGL+GL + TA+NDG VVGAEGG+EGLRLEVLLLLGLGLEGVFR VVGFL
Sbjct: 31 EGLEAAVDMLLRWGADETTLNYGGASPADFLGGRYGKVIGHNPAPQDEIDRTRLLLSRAPADRAWRRRGWLVMLRSRDSKAQEGKCRSSGGYDHGDGGEVGGSEMARSEGMAGADYGRPGTTRNGAGGEVEAGGGEEVQDIAAGLLGLRRKSVVHTASNDGCVVGAEGGEEGLRLEVLLLLGLGLEGVFRAVVGFL 226
BLAST of mRNA_L-elsbetiae_contig1982.5923.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE) HSP 1 Score: 90.5 bits (223), Expect = 1.410e-15 Identity = 53/108 (49.07%), Postives = 67/108 (62.04%), Query Frame = 2
Query: 704 HTLQRPLFIAALNIGGRQGAVEIVDHLLRAGADETIADNRGNKPADAVGLEKRMYRLEGDLWVEDENRAHELLANAPADRAWRRRGWLVMLRSRDSKAKAGKCCSNGH 1027
++L PL A GRQGA E+V+ LLRAGADETIA+ +GNK D +G + E D ED R ELLANAPADRAWRRRG+L+M R++ + + S H
Sbjct: 241 NSLLTPLMKAGRQ-AGRQGAAEVVNSLLRAGADETIANVQGNKAVDMIGEDVE----EEDRLTEDVERVRELLANAPADRAWRRRGYLIMCRAQPDRVPERRMTSGTH 343
BLAST of mRNA_L-elsbetiae_contig1982.5923.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI) HSP 1 Score: 79.7 bits (195), Expect = 5.380e-12 Identity = 45/83 (54.22%), Postives = 52/83 (62.65%), Query Frame = 2
Query: 734 ALNIGGRQGAVEIVDHLLRAGADETIADNRGNKPADAVGLEKRMYRLEGDLWVEDENRAHELLANAPADRAWRRRGWLVMLRS 982
A + GRQG+ E+VD LLR GADET D G +PAD VG L L + HELLANAPADRAWRRRG LV+ R+
Sbjct: 268 AASYAGRQGSAELVDLLLRRGADETTPDRNGQQPADRVG---HCMELGDVLLGHEVVLVHELLANAPADRAWRRRGLLVLCRA 347
BLAST of mRNA_L-elsbetiae_contig1982.5923.1 vs. uniprot
Match: D7G0H9_ECTSI (Ankyrin repeat domain protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0H9_ECTSI) HSP 1 Score: 78.2 bits (191), Expect = 1.050e-11 Identity = 43/90 (47.78%), Postives = 54/90 (60.00%), Query Frame = 2
Query: 731 AALNIGGRQGAVEIVDHLLRAGADETIADNRGNKPADAVG-LEKRMYRLEGDLWVEDENRAHELLANAPADRAWRRRGWLVMLRSRDSKA 997
+AL+ QG V LLR GADET+ D GN PA +G + + + R E + + E+L APADRAWRRRGWLVMLR+RD A
Sbjct: 103 SALHCACMQGHAACVSELLRGGADETVEDEDGNSPAQVIGTMSESLERAEDIVLI------REMLRRAPADRAWRRRGWLVMLRNRDCVA 186
BLAST of mRNA_L-elsbetiae_contig1982.5923.1 vs. uniprot
Match: D7G1U1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U1_ECTSI) HSP 1 Score: 77.8 bits (190), Expect = 1.830e-11 Identity = 42/88 (47.73%), Postives = 57/88 (64.77%), Query Frame = 2
Query: 743 IGGRQGAVEIVDHLLRAGADETIADNRGNKPADAVGLEKRMYRLEGDLWVEDENRAHELLANAPADRAWRRRGWLVMLRSRDSKAKAG 1006
+G R G+ ++VD LLR GADETI +G AD++G +R +R + ED+ RA LLA APADRAWRRRG LV+ R+ + + G
Sbjct: 283 VGQRHGSAQVVDLLLRWGADETIVSKQGETAADSIGT-RRCHRTD----PEDDERARSLLARAPADRAWRRRGLLVLCRAHPDRLQLG 365
BLAST of mRNA_L-elsbetiae_contig1982.5923.1 vs. uniprot
Match: A0A6H5JMJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMJ6_9PHAE) HSP 1 Score: 72.0 bits (175), Expect = 1.050e-10 Identity = 39/92 (42.39%), Postives = 54/92 (58.70%), Query Frame = 2
Query: 731 AALNIGGRQGAVEIVDHLLRAGADETIADNRGNKPADAVGLEKRMYRLEGDLWVEDENRAHELLANAPADRAWRRRGWLVMLRSRDSKAKAG 1006
+A + G +G E+VD LLR+GADETI D+ G D + E L G E ++R +LL NA ADRAW RR +LV+ R+ +A +G
Sbjct: 90 SATAVAGFEGDTEVVDSLLRSGADETILDSEGRAAVDMISWEVAGLHLSG----EQDDRVRDLLVNAQADRAWHRRRYLVLCRTHPDRADSG 177
BLAST of mRNA_L-elsbetiae_contig1982.5923.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI) HSP 1 Score: 72.8 bits (177), Expect = 1.250e-9 Identity = 41/88 (46.59%), Postives = 55/88 (62.50%), Query Frame = 2
Query: 719 PLFIAALNIGGRQGAVEIVDHLLRAGADETIADNRGNKPADAVGLEKRMYRLEGDLWVEDENRAHELLANAPADRAWRRRGWLVMLRS 982
PL IA + G +V+ LLR GADE + +N G+ PAD VG+ ++ L+ + D R H +LA APADR+WRRRGWLV+ RS
Sbjct: 357 PLHIACTRLRG-----SVVELLLRWGADEKLPNNDGDTPADVVGVLEQ-NDLDDEEREADNQRIHRMLARAPADRSWRRRGWLVLSRS 438
BLAST of mRNA_L-elsbetiae_contig1982.5923.1 vs. uniprot
Match: Q8QNP0_ESV1K (EsV-1-21 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNP0_ESV1K) HSP 1 Score: 72.8 bits (177), Expect = 1.290e-9 Identity = 40/84 (47.62%), Postives = 47/84 (55.95%), Query Frame = 2
Query: 743 IGGRQGAVEIVDHLLRAGADETIADNRGNKPADAVGLEKRMYRLEGDLWVEDENRAHELLANAPADRAWRRRGWLVMLRSRDSK 994
I R +VD LLR GADET+ D+RG P D R R E + R +LL NAPADR WRRRGWLVML R+ +
Sbjct: 404 IKNRDNTEAMVDLLLRWGADETVVDDRGRTPLDVFTSGTRFQRT-----AETKERVRKLLVNAPADRTWRRRGWLVMLWERERR 482
BLAST of mRNA_L-elsbetiae_contig1982.5923.1 vs. uniprot
Match: D8LRZ8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRZ8_ECTSI) HSP 1 Score: 72.4 bits (176), Expect = 1.380e-9 Identity = 71/191 (37.17%), Postives = 84/191 (43.98%), Query Frame = 2
Query: 758 GAVEIVDHLLRAGADETIADNRGNKPADAVGLEKRMYRLEGDLWVEDENRAHELLANAPADRAWRRRGWLVMLRSRDSKAKAGKCCSNGHGAGTKDEGSETAKREDIEDVEYDPRKTNNGVDGELETEAVGGVIDRAAGLIGLETDGAMGTANNDGSVVGAEGGQEGLRLEVLLLLGLGLEGVFRTVVGFL 1330
G VD LL+ GADET N GN PAD L + + R LLA APA+RAWRRR WLVMLRS A+A G DEGS D +D + + NG A GGV R N VG EGG GL V ++GLG E VFR+++ FL
Sbjct: 294 GVEATVDLLLQWGADETAVHNDGNTPAD--WLVENNNENGTTCSTAEIGRVRLLLARAPANRAWRRRCWLVMLRSCAKTARA-----TTDKTGDADEGSNDVG--DRKDGKCKGARRENG------ESAGGGVRSRM----------------NGAGEVGVEGGASGLASIVASVVGLGPEEVFRSILSFL 453
BLAST of mRNA_L-elsbetiae_contig1982.5923.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE) HSP 1 Score: 73.2 bits (178), Expect = 1.400e-9 Identity = 43/90 (47.78%), Postives = 53/90 (58.89%), Query Frame = 2
Query: 713 QRPLFIAALNIGGRQGAVEIVDHLLRAGADETIADNRGNKPADAVGLEKRMYRLEGDLWVEDENRAHELLANAPADRAWRRRGWLVMLRS 982
Q PL + A G G E+VD LLR GADET G+ AD V L+ E D ED +R +LLA APADRAWRRRG+L++ R+
Sbjct: 623 QTPLHLVAAKAGS-PGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTE----ESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRA 707
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 80.1 |
| Seed ortholog evalue | 2.3e-12 |
| Seed eggNOG ortholog | 2880.D7FYD0 |
| KEGG ko | ko:K21440 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259 |
| EggNOG free text desc. | response to abiotic stimulus |
| EggNOG OGs | COG0666@1,KOG4177@2759 |
| COG Functional cat. | G |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko04131 |
| Ec32 ortholog description | EsV-1-8 |
| Ec32 ortholog | Ec-00_006020.1 |
| Exons | 2 |
| Model size | 2349 |
| Cds size | 1077 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815820.574778-UTR-L-elsbetiae_contig1982:1..257 | 1622815820.574778-UTR-L-elsbetiae_contig1982:1..257 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1982 2..257 + |
| 1691683124.3372784-UTR-L-elsbetiae_contig1982:1..257 | 1691683124.3372784-UTR-L-elsbetiae_contig1982:1..257 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1982 2..257 + |
| 1622815820.601806-UTR-L-elsbetiae_contig1982:1334..1373 | 1622815820.601806-UTR-L-elsbetiae_contig1982:1334..1373 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1982 1335..1373 + |
| 1691683124.358895-UTR-L-elsbetiae_contig1982:1334..1373 | 1691683124.358895-UTR-L-elsbetiae_contig1982:1334..1373 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1982 1335..1373 + |
| 1622815820.6163065-UTR-L-elsbetiae_contig1982:2808..3785 | 1622815820.6163065-UTR-L-elsbetiae_contig1982:2808..3785 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1982 2809..3785 + |
| 1691683124.3682473-UTR-L-elsbetiae_contig1982:2808..3785 | 1691683124.3682473-UTR-L-elsbetiae_contig1982:2808..3785 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1982 2809..3785 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815820.5873497-CDS-L-elsbetiae_contig1982:257..1334 | 1622815820.5873497-CDS-L-elsbetiae_contig1982:257..1334 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1982 258..1334 + |
| 1691683124.3500412-CDS-L-elsbetiae_contig1982:257..1334 | 1691683124.3500412-CDS-L-elsbetiae_contig1982:257..1334 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1982 258..1334 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1982.5923.1 >prot_L-elsbetiae_contig1982.5923.1 ID=prot_L-elsbetiae_contig1982.5923.1|Name=mRNA_L-elsbetiae_contig1982.5923.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=359bp
MVSTLLLRGADKDALDDDGKTPLMWASFEFGGLSVVKTLLAAGADASIRD
IYGASALHFAARNGHGDVVEALVEHGTDVNVVDQNQFTPLHGAARHNDTK
AVDVLLRAGANIEARCWSGTTPLYWACEATSREAVLSLLKHGADVNTQGH
TLQRPLFIAALNIGGRQGAVEIVDHLLRAGADETIADNRGNKPADAVGLE
KRMYRLEGDLWVEDENRAHELLANAPADRAWRRRGWLVMLRSRDSKAKAG
KCCSNGHGAGTKDEGSETAKREDIEDVEYDPRKTNNGVDGELETEAVGGV
IDRAAGLIGLETDGAMGTANNDGSVVGAEGGQEGLRLEVLLLLGLGLEGV
FRTVVGFL* back to topmRNA from alignment at L-elsbetiae_contig1982:2..3785+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig1982.5923.1 ID=mRNA_L-elsbetiae_contig1982.5923.1|Name=mRNA_L-elsbetiae_contig1982.5923.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3784bp|location=Sequence derived from alignment at L-elsbetiae_contig1982:2..3785+ (Laminarionema elsbetiae ELsaHSoW15)
CAGCCACGACTGTTCAGCGCTCGACATTGCTGCTCGAGAGGGACATGGTG
ATGTTGTTGAAGCCATCGTAGAAGCCATCGTGGAACGTGGGGCAGACGTG
AATGCTGTCCGCTCGTCTGTTCTGTATGAGGCTACCTGGGGTGGGCACGA
GCAGTTGGTGACCGACTTGCTGATAGCCGGGGCTAACCCTAACTGGCGGG
ATGGCCGCTACGGCACCTCTGCGCTCGACTTGGCTGCCGAATATGGGTAT
GACAGGATGGTGTCCACTCTGCTTCTCAGAGGGGCCGATAAGGACGCTCT
CGACGATGACGGGAAGACACCGCTGATGTGGGCATCATTTGAATTTGGTG
GTCTTTCGGTCGTGAAGACCCTGTTGGCCGCCGGTGCTGATGCAAGTATC
CGGGACATCTATGGCGCATCGGCGCTCCACTTTGCCGCTAGAAACGGGCA
TGGTGATGTTGTTGAAGCCCTCGTAGAACATGGGACAGATGTTAACGTTG
TTGATCAAAACCAGTTTACGCCTCTTCATGGAGCCGCGCGCCACAACGAC
ACCAAGGCTGTGGATGTGCTTCTCAGGGCTGGGGCCAACATTGAAGCGAG
GTGTTGGAGTGGCACCACGCCTCTTTATTGGGCTTGCGAAGCGACCAGTC
GTGAAGCTGTGCTTAGCCTTTTGAAGCATGGTGCAGACGTCAACACCCAG
GGGCATACCCTTCAAAGACCGTTGTTTATTGCAGCACTTAATATCGGCGG
TAGACAAGGAGCTGTGGAGATCGTGGACCATCTGCTGAGGGCAGGTGCAG
ACGAGACTATCGCTGACAACCGGGGTAACAAACCAGCGGATGCGGTTGGC
TTGGAAAAGCGTATGTACCGACTGGAGGGGGACCTTTGGGTCGAGGATGA
GAACCGCGCACACGAGCTGTTGGCCAACGCTCCGGCCGACAGAGCGTGGC
GTCGCCGGGGTTGGCTGGTCATGCTCCGCTCGCGCGACTCGAAGGCTAAG
GCGGGAAAATGCTGCTCTAACGGCCACGGCGCTGGTACTAAAGACGAGGG
GTCTGAGACGGCAAAGAGAGAGGACATCGAAGATGTTGAATACGACCCTA
GGAAAACAAACAACGGTGTGGATGGCGAACTTGAAACGGAAGCTGTGGGG
GGGGTCATTGATCGGGCGGCAGGGCTGATTGGGCTTGAAACGGACGGCGC
CATGGGCACGGCCAACAACGACGGGAGTGTAGTTGGAGCCGAGGGTGGAC
AAGAGGGTTTGCGATTGGAGGTGCTACTGCTGTTAGGGCTCGGGCTGGAG
GGCGTGTTTCGCACGGTAGTGGGCTTTCTTTGAGGAGGAACACCAACGAA
GGGGCTTCTCCTCGAAGCTTCGGTGAGTGCGTGCTCTGTATGTTTGTGCA
ATTGTTTTGACGGCCGACCGCAATAAAGTGGCATCAACTAGTTTCAAGAC
CTATGCAGATCTGTCGTACATTTGTACATTTTTTTTTCATCTTTGGCCTA
CACAACTTTGATTAAATAGTCCCTCGGGGCGTGACAATCGATCGGACGCG
ATACCCGCACGTTTTCCAATTTGGTGATCTTGGAGCTGTCGTCTACAATC
CGATTTATTGGTTGTTTTTGTGAGGATCACACGTGGCATCGTATGTACTC
GCTCCAAAAAGCTGACAGCAGCACCAGCAGCAGCAGCAGCAGCAGTAAGA
TGCTCTACTCCACAGGTGTTGTGACTCCATCGTTCCCCGCTGCAGAAGGC
CAAAACCACGTGAGTGTGATACATGGCATCAACATCCAGGTTCCGTCGCA
GAGTTTTCACTAGCCGACTCGACCCATCTAGGATACACCCTCTTCTAGCA
CAAAATATCAGAACGTTTTCGCTTCCGTGCGCTGTTCAGCCTCTCGCGAC
CGCGTGGCGCACACGCGCGCCCCCCCGCGCGCGAGAACCGGTGCCGGTGA
CTGGGGATCCGAATAACTTGCTTGGAGGGGAGTCTCGAGGGTACCCCCTT
CATGAAAAATGCACGAAGAACGTTTCACTCTGTGCGAGATCCACGCTGCG
TGACCTTTCCCGAGATCCTCCGCAGCGGTCTGTGCAGTCCCTTTTCGTCG
GAAGTAGGAGCGGTGACGGCGACCAGGGTCTCGGGTTTTCGCCTCTAGTT
AGCCGTGGTTCCGTTGGTGTGGTACTATTTTTTCGCTTTTCCCAATTTAT
CCTCTCCTATTTTTTGTTATTCTGTCACTCCGAAAGTACCCCACATCTTC
GCCTTTCGTTGGCGATGGGGGATAGTACGATTGATGCTGGCTACCCATAA
AAAAATGATGATATTGCGGTGGCGTAGCAGTGGCTGCACCTCTGGCTTGT
GCATGCGTCTCTCTCTTCGCCGGTGTGTTTAGATTGCGGTTGCCGTCACC
AGGTGTAGATGTTTGACTATGTTTGCAGTTTACACTCGATCCAAGCATAT
CTATCAATATGCTCAGCTGCCCCTTTACGGCCTGCGGCTCTGAAAAACCT
TCTTGGTTGCATGCTCAAAGTATCTCATGATTCGTATGAGACCGGTGTTT
GACTCAAGCTTCTCTGGGCTTCCGTCTAGGAGGGCCCGATCTGAGGAATG
TGTGCAGTTGCGTGAGTTATGTGATCATCGAAGGACCTCTACGAAAAACC
GTGCTGTGGCAGTACTCCGCTTGCATGCGGCTGGCTCTCGCATTTCATCC
GCAGGTCCATTTCCCCCCCATTCGCCATGACTTTTCACCTCGTGATGTAT
CGCTCTTTCCACCGCTTCAATGTCTCGTCGTTGTTTCCGTCAACCTGGGA
AGAACAGATGTACCTGTTCAAGGACCCCAAGTATCGGCACAACAAGCATC
TGATGCCCTGATAATACCGTGTGGACTTCGGAGCAAACGGGAGCACACCA
GGACGAGAGAGTATGTAACGGCGCAGCAAGCTACGGAAGTACCGGCAAGC
TGATAATAACCAGAAATAATCGAGCTCAGGCTGACGTCTTTTGTTGTTTG
CGAGCGGGAAACCGCCCTCTCTTTAGCTGTGATTTCTCATTTGGGCCCCC
GAAAAGACGGTACATTTTAGCTAGAAGGGCAATCTATAAGCAAAAGTGAG
TTTGAGAAGTACGCAGATTCCCGAAAATTTGGCAGCCCATGTCCCCGCGT
CTTCTGCAGGTGATGCAGCCTTTGTTACTACCTCCTTGTCGCGGTACGGT
ACGCGGAAGGGGGTTGTGTTGGGACACACGTTCTTGGTCTGTTTATCGCG
TGATGAAAAAGGTACAGGGAGGAGGGAATGCATCTTCGTGAGATGAGTTT
ACTTTGCGTTGATCGCGATTGGGCGGGAGATGACCGAGAGAAACAATAGG
GGACCGATCCGGAAACGGAAACGGGAGAGTGTGGACGAGATTCCATTAAC
GATGGCCAACAAGAGCTTTCACCCATAACGCAATGTAGTAAGATCGGGAT
GGGCGTAGGTAGGACCTATCTCTTTGAAGTTTGGCAGCCTACTACAGCGG
CAATAGTCTACAGCGGCAATAGTCTACAGTGCATCCGTGGAATTTGGCAG
AGAACCTTTCACGGCCTGTTCCCGATCCCCGTATCCCCGCCTCTGGTTTC
ACCGCGTGGAACGCTAAAACATTTACCCATGATTATTTATTTTCACATTT
ATTTCCAGTGCTCGACGGGCTCCTTGCCACGAGGGCATCTTGCCGGAGTA
CTGAACCGTGGTCACACAGGAGGGTTCCCCTCCCCGAGGCCCCCACTCCC
ATCTTCTGCTGTGCTTGCCTAAGATTTTTGTCGC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig1982:2..3785+ >mRNA_L-elsbetiae_contig1982.5923.1 ID=mRNA_L-elsbetiae_contig1982.5923.1|Name=mRNA_L-elsbetiae_contig1982.5923.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2154bp|location=Sequence derived from alignment at L-elsbetiae_contig1982:2..3785+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGTGTCCACTCTGCTTCTCAGAGGGGCCGATAAGGACGCTCTCGACGA
TGACGGGAAGACACCGCTGATGTGGGCATCATTTGAATTTGGTGGTCTTT
CGGTCGTGAAGACCCTGTTGGCCGCCGGTGCTGATGCAAGTATCCGGGAC
ATCTATGGCGCATCGGCGCTCCACTTTGCCGCTAGAAACGGGCATGGTGA
TGTTGTTGAAGCCCTCGTAGAACATGGGACAGATGTTAACGTTGTTGATC
AAAACCAGTTTACGCCTCTTCATGGAGCCGCGCGCCACAACGACACCAAG
GCTGTGGATGTGCTTCTCAGGGCTGGGGCCAACATTGAAGCGAGGTGTTG
GAGTGGCACCACGCCTCTTTATTGGGCTTGCGAAGCGACCAGTCGTGAAG
CTGTGCTTAGCCTTTTGAAGCATGGTGCAGACGTCAACACCCAGGGGCAT
ACCCTTCAAAGACCGTTGTTTATTGCAGCACTTAATATCGGCGGTAGACA
AGGAGCTGTGGAGATCGTGGACCATCTGCTGAGGGCAGGTGCAGACGAGA
CTATCGCTGACAACCGGGGTAACAAACCAGCGGATGCGGTTGGCTTGGAA
AAGCGTATGTACCGACTGGAGGGGGACCTTTGGGTCGAGGATGAGAACCG
CGCACACGAGCTGTTGGCCAACGCTCCGGCCGACAGAGCGTGGCGTCGCC
GGGGTTGGCTGGTCATGCTCCGCTCGCGCGACTCGAAGGCTAAGGCGGGA
AAATGCTGCTCTAACGGCCACGGCGCTGGTACTAAAGACGAGGGGTCTGA
GACGGCAAAGAGAGAGGACATCGAAGATGTTGAATACGACCCTAGGAAAA
CAAACAACGGTGTGGATGGCGAACTTGAAACGGAAGCTGTGGGGGGGGTC
ATTGATCGGGCGGCAGGGCTGATTGGGCTTGAAACGGACGGCGCCATGGG
CACGGCCAACAACGACGGGAGTGTAGTTGGAGCCGAGGGTGGACAAGAGG
GTTTGCGATTGGAGGTGCTACTGCTGTTAGGGCTCGGGCTGGAGGGCGTG
TTTCGCACGGTAGTGGGCTTTCTTTGAATGGTGTCCACTCTGCTTCTCAG
AGGGGCCGATAAGGACGCTCTCGACGATGACGGGAAGACACCGCTGATGT
GGGCATCATTTGAATTTGGTGGTCTTTCGGTCGTGAAGACCCTGTTGGCC
GCCGGTGCTGATGCAAGTATCCGGGACATCTATGGCGCATCGGCGCTCCA
CTTTGCCGCTAGAAACGGGCATGGTGATGTTGTTGAAGCCCTCGTAGAAC
ATGGGACAGATGTTAACGTTGTTGATCAAAACCAGTTTACGCCTCTTCAT
GGAGCCGCGCGCCACAACGACACCAAGGCTGTGGATGTGCTTCTCAGGGC
TGGGGCCAACATTGAAGCGAGGTGTTGGAGTGGCACCACGCCTCTTTATT
GGGCTTGCGAAGCGACCAGTCGTGAAGCTGTGCTTAGCCTTTTGAAGCAT
GGTGCAGACGTCAACACCCAGGGGCATACCCTTCAAAGACCGTTGTTTAT
TGCAGCACTTAATATCGGCGGTAGACAAGGAGCTGTGGAGATCGTGGACC
ATCTGCTGAGGGCAGGTGCAGACGAGACTATCGCTGACAACCGGGGTAAC
AAACCAGCGGATGCGGTTGGCTTGGAAAAGCGTATGTACCGACTGGAGGG
GGACCTTTGGGTCGAGGATGAGAACCGCGCACACGAGCTGTTGGCCAACG
CTCCGGCCGACAGAGCGTGGCGTCGCCGGGGTTGGCTGGTCATGCTCCGC
TCGCGCGACTCGAAGGCTAAGGCGGGAAAATGCTGCTCTAACGGCCACGG
CGCTGGTACTAAAGACGAGGGGTCTGAGACGGCAAAGAGAGAGGACATCG
AAGATGTTGAATACGACCCTAGGAAAACAAACAACGGTGTGGATGGCGAA
CTTGAAACGGAAGCTGTGGGGGGGGTCATTGATCGGGCGGCAGGGCTGAT
TGGGCTTGAAACGGACGGCGCCATGGGCACGGCCAACAACGACGGGAGTG
TAGTTGGAGCCGAGGGTGGACAAGAGGGTTTGCGATTGGAGGTGCTACTG
CTGTTAGGGCTCGGGCTGGAGGGCGTGTTTCGCACGGTAGTGGGCTTTCT
TTGA back to top
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