mRNA_L-elsbetiae_contig19817.5922.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig19817.5922.1 vs. uniprot
Match: D7FS55_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS55_ECTSI) HSP 1 Score: 238 bits (607), Expect = 6.020e-77 Identity = 120/132 (90.91%), Postives = 126/132 (95.45%), Query Frame = 1 Query: 1 QSCWCLSFREWARDAGLLWLPAALLGGTAACLGGAHHVVRGALAAGELSTLQYCLVHLPVSLHFGWVSCATLVNLNSYIALLSFSDKRKLNFSLASIAAAVGLAVAVTGSTGDPVYAGVVAWALSAVASEKG 396 QSCWCLSFREWARD+GLLW PAALLGGTAACLGGAHHVVRGALAAGE+S LQY LVHLPVSLHFGWVSCATLVN N+YI+LL FSDK KLNFSLASIA+AVGLAVAVTG+TGDPVYAGVVAWALSAVASEKG Sbjct: 142 QSCWCLSFREWARDSGLLWFPAALLGGTAACLGGAHHVVRGALAAGEMSNLQYGLVHLPVSLHFGWVSCATLVNFNNYISLLPFSDKGKLNFSLASIASAVGLAVAVTGTTGDPVYAGVVAWALSAVASEKG 273
BLAST of mRNA_L-elsbetiae_contig19817.5922.1 vs. uniprot
Match: D8LCC2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCC2_ECTSI) HSP 1 Score: 150 bits (379), Expect = 3.650e-40 Identity = 76/133 (57.14%), Postives = 94/133 (70.68%), Query Frame = 1 Query: 1 QSCWCLSFREWARDAGLLWLPAALLGGTAACLGGAHHVVRGALAAGELSTLQYCLVHLPVSLHFGWVSCATLVNLNSYIALLS-FSDKRKLNFSLASIAAAVGLAVAVTGSTGDPVYAGVVAWALSAVASEKG 396 Q+ WC SFR WARD+GLLWLPA LLGGT LGG H ++R A +++ LQY VH+P+SLH GW+SCATLVNLN Y A ++ S++ KL +L S+ AAV L VA+T DP+YA VVAWAL AV S G Sbjct: 399 QALWCFSFRPWARDSGLLWLPALLLGGTGVALGGVHRILREAWFTSDMTVLQYLAVHVPLSLHLGWISCATLVNLNGYFATINKLSNRVKLGLALGSVVAAVALGVAITLLREDPIYAAVVAWALWAVGSPAG 531
BLAST of mRNA_L-elsbetiae_contig19817.5922.1 vs. uniprot
Match: A0A7S2UXB1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXB1_9STRA) HSP 1 Score: 118 bits (296), Expect = 8.580e-30 Identity = 66/132 (50.00%), Postives = 90/132 (68.18%), Query Frame = 1 Query: 1 QSCWCLSFREWARDAGLLWLPAALLGGTAACLGGAHHVVRGALAAGELSTLQYCLVHLPVSLHFGWVSCATLVNLNSYIALLSFSDKRKLNFSLASIAAAVGLAVAVTGSTGDPVYAGVVAWALSAVASEKG 396 QS WC +FR WA+ +G LWLPAALL TA LGGAH V+ AL + E+S L+Y +V++P++LHFGW++ A+LV+ N Y+A ++ S K S ASI A V A V + +P Y VV+WAL+AVA +KG Sbjct: 146 QSLWCSAFRPWAKKSGFLWLPAALLTLTAVALGGAHKVLFDALHSEEVSMLEYIIVNIPLTLHFGWITAASLVSWNGYLASVTASISIKSLASSASIVAGVIAAALVGWNRIEPFYPLVVSWALAAVADKKG 277
BLAST of mRNA_L-elsbetiae_contig19817.5922.1 vs. uniprot
Match: A4S135_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S135_OSTLU) HSP 1 Score: 112 bits (279), Expect = 7.940e-28 Identity = 63/132 (47.73%), Postives = 83/132 (62.88%), Query Frame = 1 Query: 1 QSCWCLSFREWARDAGLLWLPAALLGGTAACLGGAHHVVRGALAAGELSTLQYCLVHLPVSLHFGWVSCATLVNLNSYIALLSFSDKRKLNFSLASIAAAVGLAVAVTGSTGDPVYAGVVAWALSAVASEKG 396 Q+ WC +FR WA+ W+ +ALL A LG AH +R A +A S Y H+P+S+HFGW+SCA LVNLNS++A D + L++ A GL AVT +TGDPVYA V+AWAL+AVAS+ G Sbjct: 88 QALWCAAFRPWAKAPRHFWVSSALLVAEAVALGSAHRALRAAASAA--SKAWYWTTHVPLSMHFGWISCAALVNLNSHVAKTCAPDTQLATAFLSAFGAG-GLGAAVTLTTGDPVYALVIAWALTAVASDGG 216
BLAST of mRNA_L-elsbetiae_contig19817.5922.1 vs. uniprot
Match: A0A4D9D883_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D883_9STRA) HSP 1 Score: 110 bits (276), Expect = 2.730e-26 Identity = 66/131 (50.38%), Postives = 86/131 (65.65%), Query Frame = 1 Query: 1 QSCWCLSFREWARDAGLLWLPAALLGGTAACLGGAHHVVRGALAAGELSTLQYCLVHLPVSLHFGWVSCATLVNLNSYIALL-SFSDKRKLNFSLASIAAAVGLAVAVTGSTGDPVYAGVVAWALSAVASE 390 QS WC++FR W + ++P+ALL TA L H V+R A+AAG + Y +VHLP+SLHFGW++CATLVNLN + A+ + KL +LASI AV L VT ++GDPV A VVAWAL AVA + Sbjct: 205 QSLWCVAFRPWVGR--MQFVPSALLAMTAVGLSRVHTVLREAVAAGAMRPWDYLIVHLPLSLHFGWITCATLVNLNGWFAVAPTLRTGDKLGLALASINVAVTLGSQVTLASGDPVIALVVAWALYAVAHD 333
BLAST of mRNA_L-elsbetiae_contig19817.5922.1 vs. uniprot
Match: A0A7S1SIL2_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SIL2_9CHLO) HSP 1 Score: 103 bits (257), Expect = 1.960e-25 Identity = 57/128 (44.53%), Postives = 81/128 (63.28%), Query Frame = 1 Query: 13 CLSFREWARDAGLLWLPAALLGGTAACLGGAHHVVRGALAAGELSTLQYCLVHLPVSLHFGWVSCATLVNLNSYIALLSFSDKRKLNFSLASIAAAVGLAVAVTGSTGDPVYAGVVAWALSAVASEKG 396 C + WA+ WL ALL A LGGAHHV+R A+ +G ++T Y H+P+SLHFGW++ A++V+LNS +A L+ S +L + AS+ + + VT TGDP+YA +AWALS VAS+ G Sbjct: 1 CAASPPWAQPPRHFWLSPALLATEAVALGGAHHVLRAAVQSGAMTTATYFTAHVPLSLHFGWITAASVVSLNS-LAALTLSLPAQLATAFASVVGSAVVGTGVTVVTGDPLYALTLAWALSGVASDGG 127
BLAST of mRNA_L-elsbetiae_contig19817.5922.1 vs. uniprot
Match: A0A7S3AHI9_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AHI9_9EUKA) HSP 1 Score: 100 bits (249), Expect = 3.050e-24 Identity = 62/131 (47.33%), Postives = 81/131 (61.83%), Query Frame = 1 Query: 10 WCLSFREWARDAGLLWLPAALLGGTAACLGGAHHVVR--GALAAGELSTLQYCLVHLPVSLHFGWVSCATLVNLNSYIALLSFSDKRKLNFSLASIAAAVGLAVAVTGSTGDPVYAGVVAWALSAVASEKG 396 WC +FR LLWLP+ LL T LG AH +R G AG L LV PV+LHFGW++ A LVNLN+Y+A S + K + AS AA+G A+ V+ TGDP++AGV+AWAL+AVA++ G Sbjct: 2 WCATFRPSVCGPALLWLPSLLLAATGLLLGMAHCAIRATGYGLAGNL------LVRWPVALHFGWITAAALVNLNNYLARQETSIRAKEVGAHASTLAALGTALYVSTCTGDPIFAGVIAWALAAVAADGG 126
BLAST of mRNA_L-elsbetiae_contig19817.5922.1 vs. uniprot
Match: A0A7R9XV25_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9XV25_MICPS) HSP 1 Score: 104 bits (259), Expect = 3.220e-24 Identity = 56/132 (42.42%), Postives = 78/132 (59.09%), Query Frame = 1 Query: 1 QSCWCLSFREWARDAGLLWLPAALLGGTAACLGGAHHVVRGALAAGELSTLQYCLVHLPVSLHFGWVSCATLVNLNSYIALLSFSDKRKLNFSLASIAAAVGLAVAVTGSTGDPVYAGVVAWALSAVASEKG 396 Q+ WC++FR WAR W+ ALL A LG GA + LST ++ LP+ LHFGW++ A +VNLNS +A+ + +L+ + AS+ A L VAV TGD V+A +AWAL+AVAS+ G Sbjct: 167 QALWCVAFRPWARRPRHFWISGALLATEAVALGRVARCFVGASPSRSLSTTEFLAARLPLGLHFGWITAAAVVNLNSLVAVAGAAPHAQLSIAFASVWGAAALGVAVALGTGDAVFAATLAWALAAVASDGG 298
BLAST of mRNA_L-elsbetiae_contig19817.5922.1 vs. uniprot
Match: A0A7S3UZ57_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UZ57_HETAK) HSP 1 Score: 98.2 bits (243), Expect = 2.380e-23 Identity = 63/125 (50.40%), Postives = 76/125 (60.80%), Query Frame = 1 Query: 52 LWLPAALLGGTAACLGGAH-----HVVRGALAAGELSTLQYCLVHLPVSLHFGWVSCATLVNLNSYIALLSFSDKR-----KLNFSLASIAAAVGLAVAVTGSTGDPVYAGVVAWALSAVASEKG 396 LW PAALL TAA L GAH H ++GA A G S YCL +LP+SLHFGW++ ATLVN N +A +D R K + AS+A AV AV DPVY+ VVAWAL+AVA E+G Sbjct: 3 LWAPAALLAATAAALAGAHGAVRAHFLQGAAAPGGSSWTDYCLCNLPLSLHFGWITAATLVNANGAVA----NDTRRTVVTKSLVARASVAVAVAAGAAVAWLRRDPVYSLVVAWALAAVADEQG 123
BLAST of mRNA_L-elsbetiae_contig19817.5922.1 vs. uniprot
Match: A0A7S0Q3J2_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q3J2_9EUKA) HSP 1 Score: 102 bits (254), Expect = 2.860e-23 Identity = 60/128 (46.88%), Postives = 76/128 (59.38%), Query Frame = 1 Query: 1 QSCWCLSFREWARDAGLLWLPAALLGGTAACLGGAHHVVRGALAAGELSTLQYCLVHLPVSLHFGWVSCATLVNLNSYIALLSFSDKRKLNFSLASIAAAVGLAVAVTGSTGDPVYAGVVAWALSAVA 384 QSCWC +FR LLW+PA LL T A LG AH +R A + L CLV +PV+LHFGW++ A LVN N+Y+A S + K + AS AAV V+ +T D V+AGV+AWAL VA Sbjct: 208 QSCWCAAFRPSVCGPRLLWVPALLLASTGAALGVAHRAIRTA----NVGALANCLVRVPVTLHFGWITAAALVNANNYLARTVASVRAKEAAAHASSLAAVAAVAYVSHTTADHVFAGVIAWALGWVA 331 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19817.5922.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig19817.5922.1 >prot_L-elsbetiae_contig19817.5922.1 ID=prot_L-elsbetiae_contig19817.5922.1|Name=mRNA_L-elsbetiae_contig19817.5922.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=132bp QSCWCLSFREWARDAGLLWLPAALLGGTAACLGGAHHVVRGALAAGELSTback to top mRNA from alignment at L-elsbetiae_contig19817:745..1769- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig19817.5922.1 ID=mRNA_L-elsbetiae_contig19817.5922.1|Name=mRNA_L-elsbetiae_contig19817.5922.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1025bp|location=Sequence derived from alignment at L-elsbetiae_contig19817:745..1769- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig19817:745..1769- >mRNA_L-elsbetiae_contig19817.5922.1 ID=mRNA_L-elsbetiae_contig19817.5922.1|Name=mRNA_L-elsbetiae_contig19817.5922.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=792bp|location=Sequence derived from alignment at L-elsbetiae_contig19817:745..1769- (Laminarionema elsbetiae ELsaHSoW15)back to top |