Homology
BLAST of mRNA_L-elsbetiae_contig1979.5906.1 vs. uniprot
Match:
D7G1U5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U5_ECTSI)
HSP 1 Score: 573 bits (1476), Expect = 6.100e-202
Identity = 276/310 (89.03%), Postives = 293/310 (94.52%), Query Frame = 1
Query: 49 MDADEEEKKTMQAVELPEQALELSFHPHRDVIASGLLDGKVCLHTYSPEGHQMALELSHHRDSCRSVLFSEDGTALFTASKDRSIVQAGETGQITWRQDKAHDWPVNTLHNVSEGILASGDDQGVIKIWDTRAKSEVAKFGDNEDFISAFATNEANDKLLATSGDATLAVFDLRQKRLEGRVTNQEDELLSVQIVKNGSRVVCGTQNGVLVSWPWGTWGDRSNRFRGHPHSVDTLLTLDEDTVLTGSSDGIIRVVSIQPDRFLGLLGDHEDFPVESIQASSSFSRDKMWIGSVSHDNKVRFWHAGYLFEE 978
MDADEEE KTMQAV+LPEQALEL+FHPHRDV+A+GL++G VCLHTYSPEGHQ+ALELSHH+ SCRSVLFSEDG AL+TASKDRSI QAGETGQ+TWRQ AHDWPVN LHNVSEGILASGDDQGVIK+WDTRAK+EVAKF NEDFISAFATNE +DKLLATSGDATLAVFDLRQKRLEGRVTNQEDELLS+QIVKNG RVVCGTQNGVLVSWPWGTWGDRS+RFRGHPHSVDTLLTLDEDTVLTGSSDGIIRVVSIQPD+FLGLLGDHEDFPVESIQ FSRDKMWIGSVSHDN +RFWHAGYLFEE
Sbjct: 1 MDADEEETKTMQAVKLPEQALELAFHPHRDVLATGLVNGSVCLHTYSPEGHQLALELSHHQASCRSVLFSEDGAALYTASKDRSIAQAGETGQVTWRQQMAHDWPVNALHNVSEGILASGDDQGVIKLWDTRAKNEVAKFDVNEDFISAFATNEESDKLLATSGDATLAVFDLRQKRLEGRVTNQEDELLSIQIVKNGRRVVCGTQNGVLVSWPWGTWGDRSSRFRGHPHSVDTLLTLDEDTVLTGSSDGIIRVVSIQPDKFLGLLGDHEDFPVESIQ----FSRDKMWIGSVSHDNNIRFWHAGYLFEE 306
BLAST of mRNA_L-elsbetiae_contig1979.5906.1 vs. uniprot
Match:
A0A6G0XX68_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XX68_9STRA)
HSP 1 Score: 342 bits (876), Expect = 6.990e-112
Identity = 158/297 (53.20%), Postives = 213/297 (71.72%), Query Frame = 1
Query: 88 VELPEQALELSFHPHRDVIASGLLDGKVCLHTYSPEGHQMALELSHHRDSCRSVLFSEDGTALFTASKDRSIVQAGETGQITWRQDKAHDWPVNTLHNVSEGILASGDDQGVIKIWDTRAKSEVAKFGDNEDFISAFATNEANDKLLATSGDATLAVFDLRQKRLEGRVTNQEDELLSVQIVKNGSRVVCGTQNGVLVSWPWGTWGDRSNRFRGHPHSVDTLLTLDEDTVLTGSSDGIIRVVSIQPDRFLGLLGDHEDFPVESIQASSSFSRDKMWIGSVSHDNKVRFWHAGYLFEE 978
+ELP +L FHP +++A+G++DGKV + YSPEG+ L L+HH+D+CR V+FSEDG AL+TAS D+SI G + W + AH PVN LH +S I+ SGDDQG +K+WD R + V ++ ++ D+IS TN+A D LL T GD L+V+DL++ + + +DELLSV+I+KNG +VVCG+Q+GVLV + W TWGD S+RF GHP SV+T+L +DEDT+LTGSSDGIIRVV I P++ LGL+GDHED PVE ++ FS DK +GSVSH NKV FW GYL++E
Sbjct: 13 IELPSDVFDLDFHPTGNIVAAGMIDGKVQAYQYSPEGNTSVLSLNHHQDACRIVMFSEDGNALYTASSDKSIRAYDTHGGVLWAELNAHLHPVNQLHRISNNIITSGDDQGCVKMWDVRQRRCVVEWNEHTDYISDMTTNDAKDTLLVTGGDGRLSVYDLKKNKFVQKSDELDDELLSVKIIKNGRKVVCGSQDGVLVIFSWDTWGDMSDRFPGHPDSVETILKVDEDTILTGSSDGIIRVVQIHPNKLLGLIGDHEDMPVEVLK----FSHDKRIVGSVSHTNKVHFWDVGYLYDE 305
BLAST of mRNA_L-elsbetiae_contig1979.5906.1 vs. uniprot
Match:
A0A067CE70_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CE70_SAPPC)
HSP 1 Score: 341 bits (875), Expect = 1.060e-111
Identity = 158/288 (54.86%), Postives = 208/288 (72.22%), Query Frame = 1
Query: 115 LSFHPHRDVIASGLLDGKVCLHTYSPEGHQMALELSHHRDSCRSVLFSEDGTALFTASKDRSIVQAGETGQITWRQDKAHDWPVNTLHNVSEGILASGDDQGVIKIWDTRAKSEVAKFGDNEDFISAFATNEANDKLLATSGDATLAVFDLRQKRLEGRVTNQEDELLSVQIVKNGSRVVCGTQNGVLVSWPWGTWGDRSNRFRGHPHSVDTLLTLDEDTVLTGSSDGIIRVVSIQPDRFLGLLGDHEDFPVESIQASSSFSRDKMWIGSVSHDNKVRFWHAGYLFEE 978
L FHP R+++A+GL++G V Y+PEGH L LSHH+D+CR V+FSEDG L+TAS D+SI TG + W + AH PVN++H +S I SGDDQG IK+WD R V ++ ++ D+IS TN+A D LLAT GD L+V+DL++ + +DELLSV+IVK G +VVCG+Q+GVLV + WGTWGD S+RF GHP SV+T+L +DEDT+LTGSSDGIIRVV I P++ LGL+GDHEDFPVE ++ FS D+ +GSVSH +KV+FW GYLF+E
Sbjct: 24 LDFHPQRNIVATGLINGSVQAFAYAPEGHASVLSLSHHQDACRKVMFSEDGNTLYTASTDKSIRAYDTTGGVMWAELNAHAHPVNSMHQISNNIFTSGDDQGCIKMWDVRQHRCVVEWNEHTDYISDMTTNDAKDTLLATGGDGRLSVYDLKKNAFVRKSDELDDELLSVRIVKGGKKVVCGSQDGVLVIFSWGTWGDMSDRFPGHPDSVETILKVDEDTILTGSSDGIIRVVQIHPNKLLGLIGDHEDFPVEVLE----FSHDRRIVGSVSHSDKVQFWDVGYLFDE 307
BLAST of mRNA_L-elsbetiae_contig1979.5906.1 vs. uniprot
Match:
K3WEM9_GLOUD (ANAPC4_WD40 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WEM9_GLOUD)
HSP 1 Score: 340 bits (871), Expect = 4.850e-111
Identity = 159/292 (54.45%), Postives = 213/292 (72.95%), Query Frame = 1
Query: 103 QALELSFHPHRDVIASGLLDGKVCLHTYSPEGHQMALELSHHRDSCRSVLFSEDGTALFTASKDRSIVQAGETGQITWRQDKAHDWPVNTLHNVSEGILASGDDQGVIKIWDTRAKSEVAKFGDNEDFISAFATNEANDKLLATSGDATLAVFDLRQKRLEGRVTNQEDELLSVQIVKNGSRVVCGTQNGVLVSWPWGTWGDRSNRFRGHPHSVDTLLTLDEDTVLTGSSDGIIRVVSIQPDRFLGLLGDHEDFPVESIQASSSFSRDKMWIGSVSHDNKVRFWHAGYLFEE 978
+ ++ FHP ++++A G +DG V ++ YS E + LEL HH+D+ R+VLF+ DG L+TAS D+SI G +TW + +AHD VN +H +S + +SGDDQG +KIWDTR +A+F ++ DFIS FATN A D LLATSGD L+V+DLR+ L G+ +DELLSV ++KNG +VVCG+Q+GVLV + WGTWGD S+RF GHP SV+T+L +DEDT+LTGSSDGIIRVV + P++ LGL+GDHEDFPVE ++ FS DK +GSVSH NKV FW GYLF++
Sbjct: 18 EVFDIDFHPTQNIVALGTIDGIVQVYKYSEETNTQVLELKHHQDAVRAVLFNPDGQTLYTASADKSIRAFDTLGNVTWAELRAHDNCVNRMHELSANVFSSGDDQGCVKIWDTRQHRCLAEFKEHTDFISGFATNLAGDHLLATSGDGRLSVYDLRKNVLTGKSDELDDELLSVSVIKNGKKVVCGSQDGVLVIFSWGTWGDMSDRFPGHPDSVETVLKVDEDTILTGSSDGIIRVVQVHPNKLLGLIGDHEDFPVEMLK----FSHDKRLVGSVSHTNKVHFWDVGYLFDD 305
BLAST of mRNA_L-elsbetiae_contig1979.5906.1 vs. uniprot
Match:
A0A6A3F0F6_9STRA (ANAPC4_WD40 domain-containing protein n=19 Tax=Phytophthora TaxID=4783 RepID=A0A6A3F0F6_9STRA)
HSP 1 Score: 339 bits (870), Expect = 6.020e-111
Identity = 160/289 (55.36%), Postives = 210/289 (72.66%), Query Frame = 1
Query: 112 ELSFHPHRDVIASGLLDGKVCLHTYSPEGHQMALELSHHRDSCRSVLFSEDGTALFTASKDRSIVQAGETGQITWRQDKAHDWPVNTLHNVSEGILASGDDQGVIKIWDTRAKSEVAKFGDNEDFISAFATNEANDKLLATSGDATLAVFDLRQKRLEGRVTNQEDELLSVQIVKNGSRVVCGTQNGVLVSWPWGTWGDRSNRFRGHPHSVDTLLTLDEDTVLTGSSDGIIRVVSIQPDRFLGLLGDHEDFPVESIQASSSFSRDKMWIGSVSHDNKVRFWHAGYLFEE 978
++ FHP D++A G +DG V ++ YS E + LEL HH+++ R++LFS DG L+TAS D+SI G TW + +AHD PVN LH +S + ASGDDQG +KIWDTR +++F ++ D+IS FATN A D LLATSGD L+ +DLR+ L G+ +DELLSV ++KNG ++VCG+Q+GVLV + WGTWGD S+RF GHP SV+ LL +DEDTVLTGSSDGI+RVV + P++ LGL+GDHEDFPVE+++ FS DK IGSVSH NKV FW GYLF+E
Sbjct: 20 DIDFHPLADIVAVGSIDGIVEVYKYSEEANTKVLELKHHQEAVRALLFSPDGQTLYTASADKSIRAFDTLGNPTWAEMRAHDHPVNRLHELSANVFASGDDQGCVKIWDTRQHRCLSEFKEHTDYISGFATNPAQDHLLATSGDGRLSAYDLRKNVLAGKSDELDDELLSVAVIKNGRKIVCGSQDGVLVIFSWGTWGDMSDRFPGHPESVEALLKVDEDTVLTGSSDGIVRVVQLHPNKLLGLIGDHEDFPVENMK----FSHDKKIIGSVSHTNKVHFWDVGYLFDE 304
BLAST of mRNA_L-elsbetiae_contig1979.5906.1 vs. uniprot
Match:
A0A5D6XKA4_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XKA4_9STRA)
HSP 1 Score: 339 bits (869), Expect = 1.040e-110
Identity = 158/291 (54.30%), Postives = 208/291 (71.48%), Query Frame = 1
Query: 103 QALELSFHPHRDVIASGLLDGKVCLHTYSPEGHQMALELSHHRDSCRSVLFSEDGTALFTASKDRSIVQAGETGQITWRQDKAHDWPVNTLHNVSEGILASGDDQGVIKIWDTRAKSEVAKFGDNEDFISAFATNEANDKLLATSGDATLAVFDLRQKRLEGRVTNQEDELLSVQIVKNGSRVVCGTQNGVLVSWPWGTWGDRSNRFRGHPHSVDTLLTLDEDTVLTGSSDGIIRVVSIQPDRFLGLLGDHEDFPVESIQASSSFSRDKMWIGSVSHDNKVRFWHAGYLFE 975
+ ++ FHP D++A G + G V ++ YS E + LEL HH D+ R V+F+ DG L+TAS D+SI G ++W + +AHD PVN LH +S+ + +SGDD G +KIWDTR +A+F ++ DFIS FATN A D LLATSGD L+V+DLR+ L G+ +DELLSV ++KNG +VVCG+Q+GVLV + WGTWGD S+RF GHP SVD +L +DEDT+LTGSSDGIIRVV + P++ LGL+GDHEDFPVE ++ FS DK +GSVSH NKV FW GYLF+
Sbjct: 18 EVFDIDFHPAADIVALGTISGVVQVYKYSEEANTQVLELKHHLDAVRGVIFAPDGQTLYTASADKSIRAFDTLGNVSWAELRAHDHPVNQLHQLSQHVFSSGDDMGCVKIWDTRQHRCLAEFKEHTDFISGFATNPAQDHLLATSGDGRLSVYDLRKNVLAGKSDELDDELLSVAVIKNGKKVVCGSQDGVLVVFSWGTWGDMSDRFPGHPDSVDAMLKIDEDTILTGSSDGIIRVVQLHPNKLLGLIGDHEDFPVEVLK----FSHDKKLVGSVSHTNKVHFWDVGYLFD 304
BLAST of mRNA_L-elsbetiae_contig1979.5906.1 vs. uniprot
Match:
A0A024UWC0_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A024UWC0_9STRA)
HSP 1 Score: 337 bits (863), Expect = 5.820e-110
Identity = 156/295 (52.88%), Postives = 211/295 (71.53%), Query Frame = 1
Query: 94 LPEQALELSFHPHRDVIASGLLDGKVCLHTYSPEGHQMALELSHHRDSCRSVLFSEDGTALFTASKDRSIVQAGETGQITWRQDKAHDWPVNTLHNVSEGILASGDDQGVIKIWDTRAKSEVAKFGDNEDFISAFATNEANDKLLATSGDATLAVFDLRQKRLEGRVTNQEDELLSVQIVKNGSRVVCGTQNGVLVSWPWGTWGDRSNRFRGHPHSVDTLLTLDEDTVLTGSSDGIIRVVSIQPDRFLGLLGDHEDFPVESIQASSSFSRDKMWIGSVSHDNKVRFWHAGYLFEE 978
LP +L FHP R+V+A+G++DGKV +TY+PEG+ L L+HH+D+CR V F+EDG ALFTAS D+SI G + W + AH PVN LH +S + ASGDDQG +K+WD R + ++ ++ D+IS ATN++ LL T GD L+V+DL++ + + +DELLSV+I+KNG +VVCG+Q+GVLV + W TWGD S+RF GHP SV+T+L +DEDT+LTGSSDGIIRVV I P++ LGL+GDHED PVE ++ FS DK +GSVSH NKV FW GYL+++
Sbjct: 14 LPSDVFDLDFHPTRNVVAAGMIDGKVQAYTYTPEGNDCVLSLNHHQDACRVVKFAEDGNALFTASSDKSIRAFDVHGGVLWAELNAHLNPVNHLHTISNNVFASGDDQGCVKMWDVRQHRCIVQWNEHTDYISDMATNDSKSTLLVTGGDGRLSVYDLKKNKFVQKSDELDDELLSVRIIKNGRKVVCGSQDGVLVIFSWDTWGDMSDRFPGHPDSVETILKVDEDTILTGSSDGIIRVVQIHPNKLLGLIGDHEDMPVEVLK----FSHDKRIVGSVSHSNKVHFWDVGYLYDD 304
BLAST of mRNA_L-elsbetiae_contig1979.5906.1 vs. uniprot
Match:
A0A3M6VF45_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VF45_9STRA)
HSP 1 Score: 335 bits (860), Expect = 2.150e-109
Identity = 161/292 (55.14%), Postives = 208/292 (71.23%), Query Frame = 1
Query: 103 QALELSFHPHRDVIASGLLDGKVCLHTYSPEGHQMALELSHHRDSCRSVLFSEDGTALFTASKDRSIVQAGETGQITWRQDKAHDWPVNTLHNVSEGILASGDDQGVIKIWDTRAKSEVAKFGDNEDFISAFATNEANDKLLATSGDATLAVFDLRQKRLEGRVTNQEDELLSVQIVKNGSRVVCGTQNGVLVSWPWGTWGDRSNRFRGHPHSVDTLLTLDEDTVLTGSSDGIIRVVSIQPDRFLGLLGDHEDFPVESIQASSSFSRDKMWIGSVSHDNKVRFWHAGYLFEE 978
Q ++ FHP +++A G +DG V ++ YS E + LEL +H+++ R++LF+ DG L+TAS D+SI G TW + +AHD PVN LH +S + ASGDD G IKIWDTR +A+F ++ D+IS FATN A D LLATSGD L +DLR+ L G+ +DELLSV ++KNG ++VCG+QNGVLV + W TWGD S+RF GHP SVD LL +DEDTVLTGSSDGI+RVV + P++ LGL+GDHEDFPVE+++ FS DK IGSVSH NKV FW GYLFEE
Sbjct: 17 QVFDIDFHPLTNIVAVGCIDGIVQIYKYSEETNSKVLELKNHQEAVRALLFAPDGQTLYTASADKSIRAFDTLGNPTWAEMRAHDHPVNRLHELSANVFASGDDLGCIKIWDTRQHRCLAEFKEHTDYISGFATNPAQDHLLATSGDGRLTAYDLRKNVLAGKSDELDDELLSVAVIKNGRKIVCGSQNGVLVIFSWDTWGDMSDRFPGHPDSVDALLKVDEDTVLTGSSDGIVRVVQLHPNKLLGLIGDHEDFPVENLK----FSYDKKIIGSVSHTNKVHFWDVGYLFEE 304
BLAST of mRNA_L-elsbetiae_contig1979.5906.1 vs. uniprot
Match:
A0A0P1A5F6_PLAHL (Transducin family protein wd-40 repeat family protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A5F6_PLAHL)
HSP 1 Score: 333 bits (853), Expect = 2.010e-108
Identity = 156/292 (53.42%), Postives = 211/292 (72.26%), Query Frame = 1
Query: 103 QALELSFHPHRDVIASGLLDGKVCLHTYSPEGHQMALELSHHRDSCRSVLFSEDGTALFTASKDRSIVQAGETGQITWRQDKAHDWPVNTLHNVSEGILASGDDQGVIKIWDTRAKSEVAKFGDNEDFISAFATNEANDKLLATSGDATLAVFDLRQKRLEGRVTNQEDELLSVQIVKNGSRVVCGTQNGVLVSWPWGTWGDRSNRFRGHPHSVDTLLTLDEDTVLTGSSDGIIRVVSIQPDRFLGLLGDHEDFPVESIQASSSFSRDKMWIGSVSHDNKVRFWHAGYLFEE 978
Q ++ FHP +++A G +DG V ++ YS E + LEL +H ++ R++LF+ DG L+TAS D+SI G+ TW + +AH+ PVN LH +SE + SGDDQG IKIWDTR +A+F ++ D+IS FATN + D LLATSGD L+ ++LR+ L G+ +DELLSV ++KNG +VVCG+Q+GVLV + WGTWGD S+RF GHP SV+TLL +DEDTVLTGSSDGI+RVV + P++ LGL+GDHED PVE+++ FS D+ IGSVSH NKV FW G+LFE+
Sbjct: 17 QVFDIDFHPQTNIVAVGCIDGIVQVYKYSEEANVKILELKNHMEAVRALLFAPDGQTLYTASADKSIRAFDALGKPTWAEMRAHEHPVNRLHELSENVFVSGDDQGCIKIWDTRQHRCLAEFKEHSDYISGFATNPSQDHLLATSGDGRLSAYNLRKNALVGKSDELDDELLSVTVIKNGRKVVCGSQDGVLVIFSWGTWGDMSDRFPGHPDSVETLLKVDEDTVLTGSSDGIVRVVQVHPNKLLGLIGDHEDLPVENLK----FSHDRKMIGSVSHTNKVHFWDVGFLFED 304
BLAST of mRNA_L-elsbetiae_contig1979.5906.1 vs. uniprot
Match:
A0A8K1CJS9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJS9_PYTOL)
HSP 1 Score: 331 bits (849), Expect = 7.550e-108
Identity = 156/301 (51.83%), Postives = 212/301 (70.43%), Query Frame = 1
Query: 76 TMQAVELPEQALELSFHPHRDVIASGLLDGKVCLHTYSPEGHQMALELSHHRDSCRSVLFSEDGTALFTASKDRSIVQAGETGQITWRQDKAHDWPVNTLHNVSEGILASGDDQGVIKIWDTRAKSEVAKFGDNEDFISAFATNEANDKLLATSGDATLAVFDLRQKRLEGRVTNQEDELLSVQIVKNGSRVVCGTQNGVLVSWPWGTWGDRSNRFRGHPHSVDTLLTLDEDTVLTGSSDGIIRVVSIQPDRFLGLLGDHEDFPVESIQASSSFSRDKMWIGSVSHDNKVRFWHAGYLFEE 978
T + + Q ++ FHP +DV+A G ++G V ++ YS + + LEL HH+D+CR+++F+ DG L+TAS D+SI G +W + +AHD PVN LH +S I+ASGDDQG IKIWDTR V ++ ++ D+IS FATN A D L+AT GD L+ +DLR+ L G+ +DELLSV ++KNG ++VCG+Q+GVLV + WGTWGD S+RF GHP SVD +L +DEDTVLTGSSDGI+RVV + P++ LGL+GDHEDFPVE+++ S D+ IGSVSH NKV FW YLF +
Sbjct: 8 TPEEIHCDAQVFDIDFHPSQDVVALGDINGVVQIYKYSEQANTKVLELKHHQDTCRALVFAPDGQTLYTASTDKSIRAFDAHGNASWAELRAHDAPVNRLHVLSNDIIASGDDQGCIKIWDTRQHRCVVEWKEHTDYISGFATNPAVDHLIATGGDGRLSAYDLRKNVLAGKSDELDDELLSVSVIKNGRKIVCGSQDGVLVIFSWGTWGDMSDRFPGHPESVDAILKVDEDTVLTGSSDGIVRVVQVHPNKLLGLIGDHEDFPVENLK----LSHDQKIIGSVSHTNKVHFWDVSYLFND 304
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1979.5906.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 6.10e-202 / Id = 89.03 Expect = 6.99e-112 / Id = 53.20 Expect = 1.06e-111 / Id = 54.86 Expect = 4.85e-111 / Id = 54.45 Expect = 6.02e-111 / Id = 55.36 Expect = 1.04e-110 / Id = 54.30 Expect = 5.82e-110 / Id = 52.88 Expect = 2.15e-109 / Id = 55.14 Expect = 2.01e-108 / Id = 53.42 Expect = 7.55e-108 / Id = 51.83 Sequence D7G1U5_ECTSI A0A6G0XX68_9STRA A0A067CE70_SAPPC K3WEM9_GLOUD A0A6A3F0F6_9STRA A0A5D6XKA4_9STRA A0A024UWC0_9STRA A0A3M6VF45_9STRA A0A0P1A5F6_PLAHL A0A8K1CJS9_PYTOL
Pages
back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota
Seed ortholog score 572.0
Seed ortholog evalue 2.3e-160
Seed eggNOG ortholog 2880.D7G1U5
Preferred name WDR55
KEGG ko ko:K12598,ko:K13109
KEGG Pathway ko03018,map03018
KEGG Module M00393
Hectar predicted targeting category other localisation
GOs GO:0000003,GO:0000741,GO:0001654,GO:0001889,GO:0002376,GO:0002520,GO:0003006,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0006996,GO:0006997,GO:0007275,GO:0007389,GO:0007423,GO:0008150,GO:0008152,GO:0009553,GO:0009559,GO:0009561,GO:0009605,GO:0009607,GO:0009617,GO:0009790,GO:0009791,GO:0009793,GO:0009799,GO:0009855,GO:0009888,GO:0009960,GO:0009987,GO:0010154,GO:0010197,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0022414,GO:0022613,GO:0030154,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0035295,GO:0040007,GO:0042254,GO:0042273,GO:0042274,GO:0042742,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0048229,GO:0048284,GO:0048316,GO:0048513,GO:0048534,GO:0048536,GO:0048538,GO:0048565,GO:0048589,GO:0048608,GO:0048731,GO:0048732,GO:0048794,GO:0048856,GO:0048869,GO:0050829,GO:0050896,GO:0051704,GO:0051707,GO:0055123,GO:0060322,GO:0060465,GO:0061008,GO:0061458,GO:0070013,GO:0071704,GO:0071840,GO:0080186,GO:0090304,GO:0098542,GO:1901360
EggNOG free text desc. ribosomal large subunit biogenesis
EggNOG OGs KOG2444@1,KOG2444@2759
EC 3.6.4.13
COG Functional cat. S
Best tax level Eukaryota
Best eggNOG OG NA|NA|NA
BRITE ko00000,ko00001,ko00002,ko01000,ko03009,ko03016,ko03019,ko03041
Exons 12
Model size 1273
Cds size 1272
Stop 1
Start 0
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815819.0082588-CDS-L-elsbetiae_contig1979:4574..4784 1622815819.0082588-CDS-L-elsbetiae_contig1979:4574..4784 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1979 4575..4784 -
1691683123.2758946-CDS-L-elsbetiae_contig1979:4574..4784 1691683123.2758946-CDS-L-elsbetiae_contig1979:4574..4784 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1979 4575..4784 -
1622815819.026869-CDS-L-elsbetiae_contig1979:5502..5670 1622815819.026869-CDS-L-elsbetiae_contig1979:5502..5670 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1979 5503..5670 -
1691683123.2879438-CDS-L-elsbetiae_contig1979:5502..5670 1691683123.2879438-CDS-L-elsbetiae_contig1979:5502..5670 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1979 5503..5670 -
1622815819.0414762-CDS-L-elsbetiae_contig1979:6580..6668 1622815819.0414762-CDS-L-elsbetiae_contig1979:6580..6668 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1979 6581..6668 -
1691683123.2967443-CDS-L-elsbetiae_contig1979:6580..6668 1691683123.2967443-CDS-L-elsbetiae_contig1979:6580..6668 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1979 6581..6668 -
1622815819.054471-CDS-L-elsbetiae_contig1979:8140..8219 1622815819.054471-CDS-L-elsbetiae_contig1979:8140..8219 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1979 8141..8219 -
1691683123.30616-CDS-L-elsbetiae_contig1979:8140..8219 1691683123.30616-CDS-L-elsbetiae_contig1979:8140..8219 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1979 8141..8219 -
1622815819.0683105-CDS-L-elsbetiae_contig1979:9062..9153 1622815819.0683105-CDS-L-elsbetiae_contig1979:9062..9153 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1979 9063..9153 -
1691683123.3168159-CDS-L-elsbetiae_contig1979:9062..9153 1691683123.3168159-CDS-L-elsbetiae_contig1979:9062..9153 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1979 9063..9153 -
1622815819.0801125-CDS-L-elsbetiae_contig1979:9885..9985 1622815819.0801125-CDS-L-elsbetiae_contig1979:9885..9985 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1979 9886..9985 -
1691683123.3278053-CDS-L-elsbetiae_contig1979:9885..9985 1691683123.3278053-CDS-L-elsbetiae_contig1979:9885..9985 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1979 9886..9985 -
1622815819.0908267-CDS-L-elsbetiae_contig1979:10855..10911 1622815819.0908267-CDS-L-elsbetiae_contig1979:10855..10911 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1979 10856..10911 -
1691683123.3409894-CDS-L-elsbetiae_contig1979:10855..10911 1691683123.3409894-CDS-L-elsbetiae_contig1979:10855..10911 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1979 10856..10911 -
1622815819.1005213-CDS-L-elsbetiae_contig1979:11182..11233 1622815819.1005213-CDS-L-elsbetiae_contig1979:11182..11233 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1979 11183..11233 -
1691683123.349977-CDS-L-elsbetiae_contig1979:11182..11233 1691683123.349977-CDS-L-elsbetiae_contig1979:11182..11233 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1979 11183..11233 -
1622815819.1104038-CDS-L-elsbetiae_contig1979:12601..12703 1622815819.1104038-CDS-L-elsbetiae_contig1979:12601..12703 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1979 12602..12703 -
1691683123.3603637-CDS-L-elsbetiae_contig1979:12601..12703 1691683123.3603637-CDS-L-elsbetiae_contig1979:12601..12703 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1979 12602..12703 -
1622815819.1206565-CDS-L-elsbetiae_contig1979:12912..12968 1622815819.1206565-CDS-L-elsbetiae_contig1979:12912..12968 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1979 12913..12968 -
1691683123.3688412-CDS-L-elsbetiae_contig1979:12912..12968 1691683123.3688412-CDS-L-elsbetiae_contig1979:12912..12968 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1979 12913..12968 -
1622815819.132209-CDS-L-elsbetiae_contig1979:13556..13651 1622815819.132209-CDS-L-elsbetiae_contig1979:13556..13651 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1979 13557..13651 -
1691683123.3771384-CDS-L-elsbetiae_contig1979:13556..13651 1691683123.3771384-CDS-L-elsbetiae_contig1979:13556..13651 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1979 13557..13651 -
1622815819.142187-CDS-L-elsbetiae_contig1979:15148..15324 1622815819.142187-CDS-L-elsbetiae_contig1979:15148..15324 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1979 15149..15324 -
1691683123.3896-CDS-L-elsbetiae_contig1979:15148..15324 1691683123.3896-CDS-L-elsbetiae_contig1979:15148..15324 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1979 15149..15324 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1979.5906.1
>prot_L-elsbetiae_contig1979.5906.1 ID=prot_L-elsbetiae_contig1979.5906.1|Name=mRNA_L-elsbetiae_contig1979.5906.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=424bp
CRHICPHRLIRYSAKRMDADEEEKKTMQAVELPEQALELSFHPHRDVIAS GLLDGKVCLHTYSPEGHQMALELSHHRDSCRSVLFSEDGTALFTASKDRS IVQAGETGQITWRQDKAHDWPVNTLHNVSEGILASGDDQGVIKIWDTRAK SEVAKFGDNEDFISAFATNEANDKLLATSGDATLAVFDLRQKRLEGRVTN QEDELLSVQIVKNGSRVVCGTQNGVLVSWPWGTWGDRSNRFRGHPHSVDT LLTLDEDTVLTGSSDGIIRVVSIQPDRFLGLLGDHEDFPVESIQASSSFS RDKMWIGSVSHDNKVRFWHAGYLFEEDDDDDDKDDTAGDNSAGSAAGGGE RAARPMAENPDMDTDSEGSGNDGKGGEAPEGADEDSDSDDSDDSDMGGGG GGGGGGGGRSKLPTANETFFADL* back to top mRNA from alignment at L-elsbetiae_contig1979:4575..15324-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1979.5906.1 ID=mRNA_L-elsbetiae_contig1979.5906.1|Name=mRNA_L-elsbetiae_contig1979.5906.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=10750bp|location=Sequence derived from alignment at L-elsbetiae_contig1979:4575..15324- (Laminarionema elsbetiae ELsaHSoW15)TGCCGCCATATTTGTCCTCATCGCCTCATCCGCTATTCGGCCAAGAGGAT
GGATGCTGACGAGGAGGAAAAGAAGACCATGCAGGCCGTTGAGCTTCCGG
AGCAAGCTCTGGAGCTCTCTTTCCATCCCCATCGCGACGTGATCGCTAGT
GGGCTGCTGGATGGCAAAGTTTGCCT GTGAGTTAGTATTTAGCATCAATA
CCCTTTCCCGGTGGAGACAGCAGCTAGCCCGGCATAGCTTGTCTGCCTGA
CATTCTGACGTGAACGTAGCAGAAAATCCTTGCCACTCATAGGGCCAGCC
AGCCTCCTACATCTCACTCTAGCATGCATTGTCCTCAAACCTGCACACGC
GGTTGCGGTTCCTCACGCCGAAACATGCTCTCACGCGGGACCCCCACCGG
CGGCGCCAATGGCAGGGTCACAAACCTTGCGCTCACACGTGCCCCTCCTG
TAAACTACGTCTTTGTCGGCTTCGTATTGTATATCCTGCAGCAGAAAAGG
TTCCACGAGTAAGTGTATGTTTCATTCTATCTTGGGCACGCTATTCGTGT
AGGGGCGTAAACCTCGGTCGTAGGCAACCAATTCATCATTTCATGAACAG
CAGTACAAGATCCCCCTTCGGAGCGAGCTCATGAGAGCACAGCGGTAGGG
GGTGATGCAAGACCAAAGAAAACAGGCGAAGGCAGCAGAAGTACTCCTAA
ATTTACAACTGAAATAAACAGCAGCTGCTGCTGTGTTTAGAGCACCGAAG
CAGCAGCTGCTGTGCATATTTATTGAAACAAATAACTGCTTGTTTTCTGT
GCTGCCGCTCCCTTGAACCAAACAGAGCTGTGTCGGTCTGTGCCCATCAG
GTACAATAGCTGTCCAGTCTCCTGGCATGTGCCGCCATGCTCAAAACAAT
GTCATACTGACGTGTTTTTGGGCTATTGGAGGCCGATAGCCTACTGATTC
AGATTTCGGAACATAACTTCCCAGACCCCAATTTGTATACTTCTATATAT
CTACATGCGTACATATGTATGTACATGGTTGTGTAAGGTAGTGAGGTGGT
TTCAAGGTCTCTCAGTCAGGCAGGCCCTTGTCGGCGTTGTGTCGAAGTGG
TACATGTTTTGCCGCCCACTTCTGTTTGTTCCGTGGGCATCGTCGTGCAC
TTGACGAGCAGCAGCAGCACCTGTAGAAAGACACTCTTGCGCGGTTTCAT
GTGTGCGTCCTATCAAACCACCGGGGGCGCCCACTCCTCGTCAGGTGTAT
CTACACCTCCGCAACTCCTTTTTCACATGCTATATCGGGGATTTGCTGTA
CATCTTGATTCCTGGCGAGTAGAATACCTACGTGTGTACGTGAACCTGGT
CACGGCCGGCTCTTGGCGGAATCACCATCGGGAAATTACCATCCTCACCA
AGTAGCCCGACAGCTCCAAGAGCGAGATCCCAGCCTGATGTAGCCCAGGG
CGGGCGAGTGGGACCCTTTCAAAAACAACGAATCAGTTCCCCGCTCAAAC
GGGGAGCCTGGTTTCCTTTTGCCAAACACACAACCAACCAGGCATATAAG
CGAACCAAAACAGAAGCAGGATAACACTCACGGCACCGGTAGTTGTTGTC
CACTTTCGGGCTCCTGGCCGGCGATGCGATATAGTATGTATACATATATC
CTGTCCGCTGCTTTCTTTCGCAGGCACACTTACTCGCCGGAGGGTCACCA
GATGGCTCTTGAGCTGTCGCACCACCGAGACTCCTGCAGGAGTGTCCTTT
TCTCAGAGGATGGCACCG GTGAGAGCGCAATGATCCTCTAAAAGAGAGCG
ATCGCGCGTCGAAAAAAATGGTTTGTTAATTGACGTTGTTTTTGTGCGAT
ATTTACAGCAGTGGCGGTTGCTGTTGCCGTTCGAGGTGTACATTGTTGGG
TGGTTGTTGGATGCTGCTGCTGTTCGTGCTGGTGTCGGTGTTGGCGACGG
TTTTTGACGGCCCCGTTTTGTGCTGCGGCGAGATGGAAAAGTTTGTCTCC
GTTCTCTCCGTAGCGTATTTCCGATTGGCACAACCAAGGGGTGCCTGATT
CTGACCAAAACCGCCAGCCTTTCACTTCCGTGATACAAGAGCGAAACCAG
CTGTTCCTCGGAGTGCGTTTTCCGCGCCTCACCCGTATGTGTTGTCCCCC
GATTGTCTCCCTCAGCGCGACACTCCCGTACGAACACGGCGCCGAAAAAA
CACGCCGGTCGATTTCATCAGCTCTTGCGCTACGAGTCATCAGTCGGCTA
CGAAGGGGTTTCACATGACAACCTACTCCCCCCCCCCCCCCCCCCCGCCA
CTTCTCCCCGCCGTCGCCGACCCACATAACTTGTCGTCGCCCCCCCTGAC
CGTCAGCGCTCTTCACGGCATCGAAGGACAGGTCGATCGTGCAAGCGGGA
GAAACTGGACAG GTGTATGGGCTTGTCCGTCTTGTATTTTGTCTTTGTAC
GATCGGTGCGTGTCGTACCGCACGACTCTTTGCCATACCTCGCCGTCGCT
GTGTGGGGGTTCCGCTACCCTACACCATTCCATGAACCGTTGTTTTGTTT
CTCTCTCCATCTCTCTCTTCTGTATCCCGTGTTGAGCTTCTCGCCGAACA
TGTATCACACTTGCCTTGTAGATCACCTGGAGGCAAGACAAGGCGCACGA
CTGGCCGGTCAACACGCTGCACAACGTGTCGGAAGGGATCCTGGCCAGCG
GAGACGACCAGGGAGTCATCAAG GTGACGGTGACGGAGTTTCAGCATCGG
AAACACAGCAGCCCAAAATCGATTTTTCACCAACTACGTGGTACCCGCCT
TAAAGCGCAGGAGAAACCTTGGACATTATTGCCTGTTTTCCTTTTTGTTT
TGCCCAGCCTTTGGAAACTTGGGTGGTCAATTCCGCGTGTGAAGAGGAGG
TGCGCGGGCCTCTTCTCTGCTGCTCCCCGAGCGGAATCGATGCTCGTGTC
ATGCCCCGTTTTGTCCTAAATATATATGAGGTGGGCTGTACGGGTCCCTC
GGCTAGCAATGGTGGCGACCTGAAGGATCCAGGCATCCAAATGTCCTTGT
CCGCCCGATCGCGTGGTACTTGAGCAGCAGGCGGATGGTTTTGGCGATGC
GTGTACATACGTACATAGAAGTACATGGGGGTTAAAGTGGAATCCTAGAA
TATCCCTCGGCAGTTTCGCTGGCTCGTTCTTGCTGTAAGCTTTGGAATCA
AGGTAGTTCCCACTTTTTGTTTTTAGTCAAACGCGTTTGGGGATACATGC
GCGGTGAAGGTCCTTGCCCGGCGAGTACCTACGCTGCGCATCTCGACGCG
ATTGGCCGGATGGACGGGCTTCGCAAGAGCTCGTTTGGAGACGATACGCG
TGATAAGTGTATCCGCTCTCTTTACCCAGACCTGAAGTACGTAGATAGGT
ATGGAAAAGTAGACAAGATATTCGTTTTAACGTTAAACCGCGCTTATTTA
TTCATGCATAGAGTACTTCGGAGAGTTTGGAATTAACGTTTTGGGTATGT
AGACAGGCACACATGGCCACGGCACGCTTCTCCGAGCCAACCGGGGTTAC
TGAAGCATCAAGGCAGGCGACGGTACCCCCTCTCTCGCTCGTGGCGAATA
AACGGTATTTAATCTTGTACTGAACCTATCTCGCGACAAAAATCTTAGGC
AAGCACCGCAGACGGGGGACGTGAGGGCCTTGGGGAAAGGAACCCTTCTG
TGCGACCACGGTTCAGTACTCTGGCAAGATGTCCTCGTGACAGGAAGCCA
ATCGAGAACTGGAAATAAATGTGAAGAAAAAACAAACTGGTCAGCGACGC
CAACCCTAGTAGAGCTCTGGTGCTGGTGAAGGAGCTCGGCGATATATAGA
AGTATATACATATATTTTCCCTCCCATTATTGGCCTATTCGTCGTCTGCC
CCACTGGACCCCTTCCTCCACTACGACTAGCTAGACGATCCAACCGGGAT
CACACAGGAGGGGAGGGGTGGACCCCAACCTGCGGTTATGACGGTACGCG
TATGTGTATCCAACTTCGTGTTCTGTCTTCTGCCTTCTTGCGGTCGTCGC
GGGGCACTTGCTTGCCTCTTGCCGAAAATCTCTTGTGCCAGATCTGGGAC
ACGAGGGCGAAGAGCGAAGTGGCCAAGTTCGGAGACAACGAG GTGAGCCT
GTGGGCGGCAGGCAGGTGGGTGGATGTCGGGTTACAAGGCAGGGGAGCTC
ATATCGCGACGACGGTGGTGCTCCGTTTTGTTCGGTTGGTTGAGGGCGCG
AGCTCAAGGCAGATTTAGTTCAGTTGCCAACACATGTGGTGTTGTGTCTC
CGTGTCCAACGCGCACTGACTACTGTTTATCAATCCACGGCACCCCCCCC
CCCCGCGCGCGCGCGCGCGCTTGCCATGCTATCATTTTTGGCGTGTTTTT
TCTACTCCCTTAGGACTTCATCTCGGCCTTCGCCACGAACGAGGCCAACG
ATAAGCTATTGGCCACCAG GTATATATAAGAATAATATCTTGGCACTCTC
TGTTGGTTGTTCGGGGGGAAACTGCTGTGGGGCAGATACAATGTAGGGAC
GTGGGCCGCGCGGGCCTGGGCCGCATATGCGGTGGAAGCTTGTGCGCGCA
CCGGGCGGACGGGGGAGGACCCTAGAACGTGCCTTCGTCTGTATCTCCGT
ATTCGATGCGTGGACGGTGCTCTGTCGGACCGGCGTTTTTGTGATTCGGT
GCAATGGAGAGTCTTGATTTGTATATTGTACAGTATGGCCTCTCTTTCTC
TGTCGCTGTGGTGTTGCCGCTTCTTCGAGTCTTGTTTTTGTCAGGGCGGG
TCGCTTGTTGCCCGTGTGTACCTCCATTTACCCACTAGGCGGAGATACGT
AGTTCATCTTTGCCGTGTCGCGTTGCTTCCTCTGTGCCTTTGTGCCTTTT
TGTTTAGCTCACTCAGCGTGCGCCGGTTTTGGTGTGCCCATGATTTTATT
TTTTATTGAGTATTTCGTGACCGCTTGCCCTCAGTCGCAAGAGCAGCGCG
CGCGGCGCCAAATCGTTAACATTTGCATACATGTGTCGGTTTTCTGCCCG
TGTTGGTTTGGTATCCTCGTAGGCCCCTCCCCTGGGTGAAAATAAATCCC
GTGACATCTGCGCGCCGCGTCCACGTTGCCGGTTGGCTGTGTTGTGCTAT
TTTCGTTTTCTTGGCGTTAGATACACATCATATGTAGTTTTTCCGTCGCT
GATCTCGTCACCAACTACTTGTTATTTGAAACAGCAATGTTCCGTTGCTG
AATACATACGTCGCCAACTGACTGTGTTGCTCTTCGTCGTTTTTTCCCCT
GTCCGCGTTTCTCGGTTCGCGCGCGCGTGGGAACGGCAGCGGAGACGCGA
CCCTGGCGGTGTTCGACCTCCGGCAGAAGAGGCTTGAAGGGAGGGTGACT
AATCAGGAGGACGAGCTGCTCTCCGTACAGATCGTGAAG GTAAGGCCGAA
GCGGGCGCTCAACCCCTTGGGTAGACAGACAGCATTGCCGTTCATTCCAG
GTGGATTATGTCATGATTGGAAGTGCTGGCAGGTTTTACTCGTGGCAGTT
GAAGAGGCGTGATTCCAGAGGAGGATGCGGCGTGCAGTGGCCTATCTTGT
TCTGCTCCTAATAATTGCAATAATGCAGCCAGATTATTTTATCGTACATT
GTTTCTCACAGTCGTGCTGTTTACCCCTTCCCCCTCGACCCAGGTACCCC
CGTTCCCGATCGCGAGCGTGCCGGCTCTGTTAGCTTGGTTTTCTTGCACG
GCCGCGACTCGCTCGCCTCGGCCCTTCCCTATTCTCCTCGGTGTTTTGTC
TCCTGGTTTTCCGTCGATGAAGACCGAAACATATTTTTTGCTTTCGCTCT
CTTGACTCTCCCGCGAGCATGCTGCGACAAAACTCATGCCCGCGCGGAAA
TGTGTCGGGGTGTACTACCCGCTTCTTGGGCTGTTTGTTGTAGGCACATT
ATTACAGCACAACAATATTATTGACTCACGGACGGTGCGATGCGGTACGG
TGCGGTGCGGTGGGGTACGGTACGGTACGGTGCGGTACGGTGCGGTACGG
TGCGGTACGGTACAGCACGGTGCGGTGCGGTGCGGTGCGGTGACGGGGGG
TGTGCCGACTCATCTCGAATCTTCCCATCTTTCGCTCTCTCGAACTTTTC
GGTTCGGTTTTGCGTGGGCAGAACGGCAGCAGAGTGGTGTGCGGTACGCA
AAACGGCGTGCTCGTCTCGTGGCCCTGGGGGACGTGGGGGGACCGCTCCA
ACAGATTTAGAG GTGAGCTATTTGTCGTGGCTGAGCTCTCACGTGGAGCC
TTTTTGTTTGCCCCGAGTCCCGGACCGGCGGCGGTGGCGGCGGTCCGATA
AGCATCTTTGGTTCTGACACGACGATCGAGGGCTTCAAAAAAACTTAAAA
CGCCGCGTGGGTCTTGTCGAAAAAACGGTTTTACTCACGCTATTGCGTGG
GTGGGCTTCGAAGAAGCTCTGGTGCGCTTGGAGTAACCAATCGGGTCTAC
GCATGCCACCCAGCCTACAACGGTTCCATTGTTTGCCCCTGCTGCGAGCG
CGACGGCAATAGTTCTCAGCAGGTTTGTAACACAATAAAGTGGTACTGGT
CCGCGGTACCCGATACGGTTGGCCCTCCATAACGTTTGACTGGGGTGGAC
AAAACAAAAAAAAAGGTATTGCATCAACGCCCGCGACGAGGCGCAAAAGA
CTAAACACGATAAAAAAAACAAAAGGGAAAAAAAGCAGTATACTATTTCA
AGTAAATAAATAAAAAACAAATGCACATCCCGAGGATCGAACCCTAGACC
TTGGCAGTGCAGAGCACAGAATGTGGCATTTGAGCTAAATTTTGACAAAA
AACATAATAGTAAAAAAAATAGATTAACAAATTCGCACATCAATTTATTT
TATAGATATATCATATGTGCAAGCTGTGCATAGATTGACTGACATTCCAC
TTTTTTGTATATAAATCAACGTTTTCGTAGTTGAGTTATCGCATTTTCCC
TACATATAAATAGAACAAACACGTGACGGAGCTGTTGTTTTGGACCACTT
AGATTTTGGCGCGGCTGACTCTCTGCTGTTCTTGACATGTTCTGGGATGT
GGCAGGACACCCGCACTCTGTCGACACGCTGCTCACTCTGGACGAAGACA
CTGTGCTCACGGGCTCGAGCGACGGTATCATCAG GTAAAACATAGCCGAG
GTGCATAATTTCACTCAATTCGTGTGTCATTACGTAAATTGCCCCCGCCG
ATGTCGCTGCCTGTAGAGCTGTCCGATCTTTGGCCAATCTCTTGCCGTTC
CCACTGTTCGCGGAACGTGCACATGGTGGTCCCTCACCGGGGTCGCACGT
GAAGGACCCCCCCCCTCCCATTCGATTTTAATTTTTTCGCAAAACGTAGC
GAGCCCCTGACTGGTGTGTTTTGGTGTAAATTTAGAATAGGAACGGTGCT
CTAGTGGATGGTCAACGATCAAGCAACATTCACATTGATAGGCAGAAAAT
GATGTTTGTCTGTTGGGAGACCGCCCTTCTGCGGCGTCTTTCTTCGCGTT
TGGAGCACATTGGCCCGATTTTGTTTCCCTGCCGCGAAACCTAGACGTCT
TGTCACCACAACACACGAGTGAGGAATTGAGGAAAGCAAGTGGCCGGCGC
ACGTTAGTCGCTGTCGCCCCTGCTCCGCCCTGGTTGCCGACCCTTGAGTT
GATACAGTTCCCGAACGCCAGGCAGGCGCCTCCCTAGCGCGCACGAAGTT
TCATACATTGGTAGATACGGCATGATGATTTGTTTTTGCATGCCTAGGAA
GGGTCAGACTCGGGGCTTGCGTCGGAGGCTTCGGTGGTGTTTTTGTTTTT
TTTCCGACGGCGCCAAGATAGAACCAGGGGGCGTATCCCCCCGCGGTTGG
TGATGTTGGCTTGTCCACTTTTGTTTTTCACCTCGCATAGCGTGTAGAGG
GGAGCGGAAGGCTCCAGACTATACTTCTATGTATCTGATCTTTTGTTTTG
TGCTTTGTGGGCCCCTCGGGTCCATTTTACTTTATTTGTTATTTTCAGTA
GTCTAGTCTATCCTGCACCCCGGGACCGCGTCCGTGTTGGATTAGTACAC
GGACTCTTGGAGGTGTACTGGACAGAGAGATCGGAACGGTTTTTAATGTG
AAGACAACAACAACAGGAGGGGTCAGACTCGGGGCTTGCGTCGGAGGCTT
CGGTGGTGTTTTTATTTTTTTTCGACGGCGCCGGAAGAAGTGGGCTACAG
AGGGTCTCCTACCGGTAGCATCGCTCCGCTTCTACACTCGGCAAAAGAAG
AGTGTTTGGATGATTCGATGAGCACCGCCACACAAGACTAGAACTGGACA
AGAAGTCAAGCTTTGTTTTTGCTTCCACCGCACCCACGCTTTCGGCATGC
AGAGGTGCGGATAGTACAGGGATGGTGGGTGAGTGTACGCAATAAGCCTT
GACTGTGGTTTCTTCCCCCCCCCCCTTCTCTCTCCCTCTCCCTCTCTCGC
TCTCGCTCTCTCTCGCTCTCTCCCTCTCTCCCCTCCTCCCTCTCTCTCAC
GCGCGCGCGTGACACTGGAACCGTCCGCCCTGGCTTTCCCTCCCATCCCC
CCGCACCCCCTCCTACCGTGTCCCAACCTTTGGCCACGATCGGATAATGT
TGTCAGGGTGGTGAGCATCCAGCCGGACAGGTTCCTCGGGCTGCTGGGGG
ATCACGAAGATTTTCCGGTGGAGTCTATCCAGGCAAGTAGCAGT GTGGCC
ACTGTGGCTTTTCAGCCGAAACAGACATTGGACATCGAACCCACTCGGTG
TAGGGTCTTTTTCGCCGTTCGCCATTGCTGCAAGTACCAATCACGGAGTT
GTCTTTCTCTTTTCGACATGCCCGCAAAAGGCAACTGCTTGTGCTTTGCG
AGGTATGAGCCCCGGCGTTACATGGTATCGTTTTTTGTATTATGTGGGTA
CTATGATGCGCCGCGTGTCCCCTCGTGGGGTTGGGTCGTCCAGCTCGGCT
TCGACGAAGGTGGTGTGTGACGTGTCCAACTGAGTGCATTCATCCTCCGA
CGAAGCCATCTCGAGCAGTTCCATCGAGCCACTTTAGCTGATCCATGCGT
GTCGGATGTTGCATGTCTCGGCGGCCGTCGTGCTGTGCTTCGGAAGCCCC
ACCGCCTCCTCTTTTTCAACAACGCCCCTCGTGTATGTACATCGTCTTTA
GTGTTCGTATGCCTCTGTTGCTCGCTGTTCGGGCTGGAAGTCCTCCCCTC
CCGTCTGCAATCTGCATTCGCGGGGCGGAACGTACACCATTCGCGGCCCA
CGACAATACCCGCTCCCCGAGGTCATGGCCCCCCCCTTGTTGGGTCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCTCAGCCTCCCCGCAGCCTATCTA
TCTTTCGTCACCTACNNNNNNNNNNGGGGGGAACGCCCCCCATCCCCGCC
CCACCCCAACCCCCCCCCCCCGGGGTCATGGCCCCCCCCTTGTTGGGCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCGCTCTATATGTCCTTCCCTGTTTT
TCTTTACATATTGCGAGAATTTAATGTCAAAATGTTGTTGCTGTTGCTGT
TGCTGTTGTTGCTTTGTGCCGCAAATCCGTTCGTGTTTTTTTTTATATAT
ACAGTTCTCGCGAGACAAGATGTGGATCGGCAGTGTCTCCCACGACAACA
AGGTCCGCTTCTGGCACGCAGGGTATCTTTTCGAAGAGGACGACGACGAC
GATGACAAAGATGACACCGCCGGCGACAACAGTGCGGGAAGTGCCGCCGG
AGGAGGTGAGAGAGCGGCACGC GTTACAGTACCGCTTTTTTAAGGGTGGC
GTTTTTTGGTGGCGCGATTCGCTTGGGAGGCATGTCAACGGGCATTTCCC
GAAGGGTGGTTCGTTCCTGGTGTAAGAGTGTCTGCTTTGCTTGGGAATAC
AGATGTGGCTGAGGGGTGAACCGCTTTCAGTTGTGTGTGGGCGGATATTG
GTGGAACTGGAATGAGAGAGGACAGCAATCTTACGCACTCGTGACGTTGG
TTGTAACTGAGGGCTGGATCGACTAGTTGGTACCGTTCACCCGCCCGCCG
CCACGAAACTGACCGTATCCACTATGGCACTCCCTTCGCCACGAAACTTG
CCCCTGTGTCCGATAACGAGCATGATAAGTTAACACCTTCGCCTGGGTCT
GTTGCATGTTTCCGATGACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCTCCCCTTTTTTCCCCCCCTCTTTTTTTTTTTTTTTTTCCCCTT
TCCTTCTCACCCCCCCCCCCCNNNNNNNNNNCCCCCGTTGCCCAAAAAAG
GGCATGAAAATTTACCCCCTCCGCCTGGGTGTTTTCTTTTTTTCCCATCC
CCCCCCCCCCCCCCCCCTCCTGCCCATCCGGCCGTCATTCCTGTTTGACG
CGTTCCTTTTTCCTTGCATTTTCGGCCATTCTAAAGCGCATCGCGACCCC
TTCCTCGCTACCCCCCCCTTTTTTAACAGCAGCTGGCAAGCCGATGGCGG
AAAACCCAGACATGGACACCGACTCTGAAGGCTCTGGAAACGACGGAAAG
GGCGGAGAGGCCCCCGAGGGTGCCGACGAGGACAGTGACAGCGACGACAG
CGACGACAGCGACATGGGCGGTGGCGGCGGCGGCGGCGGCGGCGGGGGTG
GTCGAAGCAAGCTCCCAACCGCGAACGAGACCTTCTTCGCGGATTTGTAG
back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1979:4575..15324-
>mRNA_L-elsbetiae_contig1979.5906.1 ID=mRNA_L-elsbetiae_contig1979.5906.1|Name=mRNA_L-elsbetiae_contig1979.5906.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2544bp|location=Sequence derived from alignment at L-elsbetiae_contig1979:4575..15324- (Laminarionema elsbetiae ELsaHSoW15) TGCCGCCATATTTGTCCTCATCGCCTCATCCGCTATTCGGCCAAGAGGAT GGATGCTGACGAGGAGGAAAAGAAGACCATGCAGGCCGTTGAGCTTCCGG AGCAAGCTCTGGAGCTCTCTTTCCATCCCCATCGCGACGTGATCGCTAGT GGGCTGCTGGATGGCAAAGTTTGCCTTGCCGCCATATTTGTCCTCATCGC CTCATCCGCTATTCGGCCAAGAGGATGGATGCTGACGAGGAGGAAAAGAA GACCATGCAGGCCGTTGAGCTTCCGGAGCAAGCTCTGGAGCTCTCTTTCC ATCCCCATCGCGACGTGATCGCTAGTGGGCTGCTGGATGGCAAAGTTTGC CTGCACACTTACTCGCCGGAGGGTCACCAGATGGCTCTTGAGCTGTCGCA CCACCGAGACTCCTGCAGGAGTGTCCTTTTCTCAGAGGATGGCACCGGCA CACTTACTCGCCGGAGGGTCACCAGATGGCTCTTGAGCTGTCGCACCACC GAGACTCCTGCAGGAGTGTCCTTTTCTCAGAGGATGGCACCGCGCTCTTC ACGGCATCGAAGGACAGGTCGATCGTGCAAGCGGGAGAAACTGGACAGCG CTCTTCACGGCATCGAAGGACAGGTCGATCGTGCAAGCGGGAGAAACTGG ACAGATCACCTGGAGGCAAGACAAGGCGCACGACTGGCCGGTCAACACGC TGCACAACGTGTCGGAAGGGATCCTGGCCAGCGGAGACGACCAGGGAGTC ATCAAGATCACCTGGAGGCAAGACAAGGCGCACGACTGGCCGGTCAACAC GCTGCACAACGTGTCGGAAGGGATCCTGGCCAGCGGAGACGACCAGGGAG TCATCAAGATCTGGGACACGAGGGCGAAGAGCGAAGTGGCCAAGTTCGGA GACAACGAGATCTGGGACACGAGGGCGAAGAGCGAAGTGGCCAAGTTCGG AGACAACGAGGACTTCATCTCGGCCTTCGCCACGAACGAGGCCAACGATA AGCTATTGGCCACCAGGACTTCATCTCGGCCTTCGCCACGAACGAGGCCA ACGATAAGCTATTGGCCACCAGCGGAGACGCGACCCTGGCGGTGTTCGAC CTCCGGCAGAAGAGGCTTGAAGGGAGGGTGACTAATCAGGAGGACGAGCT GCTCTCCGTACAGATCGTGAAGCGGAGACGCGACCCTGGCGGTGTTCGAC CTCCGGCAGAAGAGGCTTGAAGGGAGGGTGACTAATCAGGAGGACGAGCT GCTCTCCGTACAGATCGTGAAGAACGGCAGCAGAGTGGTGTGCGGTACGC AAAACGGCGTGCTCGTCTCGTGGCCCTGGGGGACGTGGGGGGACCGCTCC AACAGATTTAGAGAACGGCAGCAGAGTGGTGTGCGGTACGCAAAACGGCG TGCTCGTCTCGTGGCCCTGGGGGACGTGGGGGGACCGCTCCAACAGATTT AGAGGACACCCGCACTCTGTCGACACGCTGCTCACTCTGGACGAAGACAC TGTGCTCACGGGCTCGAGCGACGGTATCATCAGGACACCCGCACTCTGTC GACACGCTGCTCACTCTGGACGAAGACACTGTGCTCACGGGCTCGAGCGA CGGTATCATCAGGGTGGTGAGCATCCAGCCGGACAGGTTCCTCGGGCTGC TGGGGGATCACGAAGATTTTCCGGTGGAGTCTATCCAGGCAAGTAGCAGT GGTGGTGAGCATCCAGCCGGACAGGTTCCTCGGGCTGCTGGGGGATCACG AAGATTTTCCGGTGGAGTCTATCCAGGCAAGTAGCAGTTTCTCGCGAGAC AAGATGTGGATCGGCAGTGTCTCCCACGACAACAAGGTCCGCTTCTGGCA CGCAGGGTATCTTTTCGAAGAGGACGACGACGACGATGACAAAGATGACA CCGCCGGCGACAACAGTGCGGGAAGTGCCGCCGGAGGAGGTGAGAGAGCG GCACGCTTCTCGCGAGACAAGATGTGGATCGGCAGTGTCTCCCACGACAA CAAGGTCCGCTTCTGGCACGCAGGGTATCTTTTCGAAGAGGACGACGACG ACGATGACAAAGATGACACCGCCGGCGACAACAGTGCGGGAAGTGCCGCC GGAGGAGGTGAGAGAGCGGCACGCCCGATGGCGGAAAACCCAGACATGGA CACCGACTCTGAAGGCTCTGGAAACGACGGAAAGGGCGGAGAGGCCCCCG AGGGTGCCGACGAGGACAGTGACAGCGACGACAGCGACGACAGCGACATG GGCGGTGGCGGCGGCGGCGGCGGCGGCGGGGGTGGTCGAAGCAAGCTCCC AACCGCGAACGAGACCTTCTTCGCGGATTTGTAGCCGATGGCGGAAAACC CAGACATGGACACCGACTCTGAAGGCTCTGGAAACGACGGAAAGGGCGGA GAGGCCCCCGAGGGTGCCGACGAGGACAGTGACAGCGACGACAGCGACGA CAGCGACATGGGCGGTGGCGGCGGCGGCGGCGGCGGCGGGGGTGGTCGAA GCAAGCTCCCAACCGCGAACGAGACCTTCTTCGCGGATTTGTAG back to top