mRNA_L-elsbetiae_contig19668.5864.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig19668.5864.1 vs. uniprot
Match: A0A6H5KYS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYS6_9PHAE) HSP 1 Score: 218 bits (555), Expect = 6.370e-65 Identity = 114/174 (65.52%), Postives = 132/174 (75.86%), Query Frame = 3 Query: 3 MGITCAQVGGLIDEGNI--AGLEACVDGAAGGGGATD---GVFATMAGYSPVSDVVEHSELDLDMADIEENADAVTEAGFTAAFTRYSTGLNSEKTDELRTIQGFSTEAGDKLTGEPFYEIWQSYWGAPDYADAFTSAACQGTGAFAGASMVTRSEGCLKGAQYQNVWMYVLHE 509 MGITCAQVGGL+D+ E C D ATD G +A +AGY+P SDVVEHSELDLD+AD+E NAD TE G AA+T YS G NSEK+ E+RT+QGFST A +KLTGE +++W++YWG+PDYAD FTSAACQGTGAF GA MVTRSE CLKGAQYQNVWMYV HE Sbjct: 148 MGITCAQVGGLLDDTGAYYTDFEPCDDSTTTTDSATDSATGTYADIAGYTPGSDVVEHSELDLDVADMETNADLETEVGLAAAYTAYSEGGNSEKSTEIRTVQGFSTGADEKLTGEATFDVWEAYWGSPDYADQFTSAACQGTGAFEGAEMVTRSECCLKGAQYQNVWMYVTHE 321
BLAST of mRNA_L-elsbetiae_contig19668.5864.1 vs. uniprot
Match: D8LQ42_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ42_ECTSI) HSP 1 Score: 215 bits (547), Expect = 1.590e-61 Identity = 112/173 (64.74%), Postives = 130/173 (75.14%), Query Frame = 3 Query: 3 MGITCAQVGGLIDEGNI--AGLEACVDGAAGGGGATD--GVFATMAGYSPVSDVVEHSELDLDMADIEENADAVTEAGFTAAFTRYSTGLNSEKTDELRTIQGFSTEAGDKLTGEPFYEIWQSYWGAPDYADAFTSAACQGTGAFAGASMVTRSEGCLKGAQYQNVWMYVLHE 509 MGITCAQVGGL+D+ A E CVD A T G +A +AGY P SDVVEHSELDLD+AD+E D +EAG TAA+T YS G NSEKTD RT+QG ST+A +KLTGE +++W++YWG+PDYAD +TSAACQGTG F GA MVTRSE CLKGAQYQNVWMYV HE Sbjct: 360 MGITCAQVGGLLDDTGAYYADFEPCVDADASTTSVTSATGTYANIAGYEPGSDVVEHSELDLDVADMEAGTDLESEAGLTAAYTAYSEGGNSEKTDSTRTLQGLSTDAQEKLTGEATFDVWEAYWGSPDYADQYTSAACQGTGTFEGAEMVTRSECCLKGAQYQNVWMYVTHE 532
BLAST of mRNA_L-elsbetiae_contig19668.5864.1 vs. uniprot
Match: D8LFX4_ECTSI (Probable high CO2 inducible periplasmic protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFX4_ECTSI) HSP 1 Score: 183 bits (464), Expect = 4.960e-53 Identity = 87/132 (65.91%), Postives = 109/132 (82.58%), Query Frame = 3 Query: 114 FATMAGYSPVSDVVEHSELDLDMADIEENADAVTEAGFTAAFTRYSTGLNSEKTDELRTIQGFSTEAGDKLTGEPFYEIWQSYWGAPDYADAFTSAACQGTGAFAGASMVTRSEGCLKGAQYQNVWMYVLHE 509 + +AGY+PVSDVVEHSELDLDM ++EE AD T+AGF AA+T YS G NSEKTD +RTIQGFST A +KL+GE +++++++YWG+ DYAD FTS AC GT F AS+ TR+EGC+KGAQYQNVWMYV+HE Sbjct: 26 YDDIAGYTPVSDVVEHSELDLDMQELEEGADLQTDAGFAAAYTAYSVGGNSEKTDSIRTIQGFSTGAQEKLSGEKWFDVYEAYWGSTDYADQFTSGACNGTEQFDDASVETRAEGCVKGAQYQNVWMYVIHE 157
BLAST of mRNA_L-elsbetiae_contig19668.5864.1 vs. uniprot
Match: D8LDE3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDE3_ECTSI) HSP 1 Score: 176 bits (446), Expect = 4.960e-48 Identity = 98/177 (55.37%), Postives = 122/177 (68.93%), Query Frame = 3 Query: 3 MGITCAQVGGLIDEGN----IAGLEACVDGAAGGGGA---TDGVFATMAGYSPVSDVVEHSELDLDMADIEENADAVTEAGFTAAFTRYSTGLNSEKTDE-LRTIQGFSTEAGDKLTGEPFYEIWQSYWGAPDYADAFTSAACQGTGAFAGASMVTRSEGCLKGAQYQNVWMYVLHE 509 +G+TC QVGGL+ + + GLE C GG TD F +AG++PVSDVVEHS++DLD +E NAD TE GFTAA+ YS G NS +E RTIQ FST+A +KL GE ++E++Q+YWGAPDYAD FTSAAC GTG++ V R+E C KGAQYQNVWMYV+HE Sbjct: 350 LGMTCDQVGGLLAGDSTTDYVPGLEPC-------GGEEEPTDSSFDPIAGWTPVSDVVEHSKIDLDTLAMETNADLQTEEGFTAAYEAYSLGGNSMYGEEGFRTIQAFSTDAEEKLGGEKWFEVYQAYWGAPDYADRFTSAACTGTGSYETVEPVVRAEACTKGAQYQNVWMYVIHE 519
BLAST of mRNA_L-elsbetiae_contig19668.5864.1 vs. uniprot
Match: A0A7S2V1S6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1S6_9STRA) HSP 1 Score: 149 bits (377), Expect = 5.510e-39 Identity = 82/174 (47.13%), Postives = 107/174 (61.49%), Query Frame = 3 Query: 3 MGITCAQVGGLIDEGNIAG----LEACVDGAAGGGGATDGVFATMAGYSPVSDVVEHSELDLDMADIEENADAVTEAGFTAAFTRYSTGLNSEKTDEL-RTIQGFSTEAGDKLTGEPFYEIWQSYWGAPDYADAFTSAACQGTGAFAGASMVTRSEGCLKGAQYQNVWMYVLHE 509 +GITC +GGL EG+ + ++ C + DG T+AGY P SDV EH+ +DLD D+ + + F A+ YS G NS K+ + RTI+GFST A K+ GEPFY I+++YWG YAD+FTSAACQGTG +A + R E C KGA YQNVWMYV+HE Sbjct: 221 LGITCDDIGGLFVEGSSSNYYPSMQPCSE--------NDGPSQTIAGYQPNSDVSEHASIDLDQGDLMDCLSESDDPDFACAYNAYSLGGNSLKSSGIVRTIKGFSTSAATKMAGEPFYGIYRTYWGDAAYADSFTSAACQGTGDYANVPDIVRVECCQKGAPYQNVWMYVIHE 386
BLAST of mRNA_L-elsbetiae_contig19668.5864.1 vs. uniprot
Match: A0A5J4Z9R4_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z9R4_PORPP) HSP 1 Score: 132 bits (333), Expect = 5.400e-33 Identity = 74/143 (51.75%), Postives = 95/143 (66.43%), Query Frame = 3 Query: 84 AGGGGATDGVFATMAGYSPVSDVVEHSELDLDMADIEENADAVTEAGFTAAFTRYSTGLNSEKTD-ELRTIQGFSTEAGDKLTGEPFYEIWQSYWGAPDYADAFTSAACQGTGAFAGASMVTRSEGCLKGAQYQNVWMYVLHE 509 AG G A F T+AGY+ SDV++ +E+DLDMADI DA + F A T Y GLNS K D +RTI+G ST AG K+TG+P ++ +++YWG+P+Y D F A GTG FA AS + R+E KGAQYQ VWMYV+HE Sbjct: 195 AGHGTAQTDDFGTIAGYTFESDVIDRAEIDLDMADISSLTDA---SEFVEAKTLYEKGLNSVKADGSIRTIRGLSTSAGTKMTGQPTFDTYEAYWGSPNYGDNFVIQALDGTGMFAAASNIFRAECATKGAQYQIVWMYVIHE 334
BLAST of mRNA_L-elsbetiae_contig19668.5864.1 vs. uniprot
Match: A0A7R9Y8Q2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y8Q2_9STRA) HSP 1 Score: 132 bits (332), Expect = 1.110e-32 Identity = 82/177 (46.33%), Postives = 106/177 (59.89%), Query Frame = 3 Query: 3 MGITCAQVGGLIDEGN------IAGLEACVDGAAGGG-GATDGVFA-TMAGYSPVSDVVEHSELDLDMADIEENADAVTEAGFTAAFTRYSTGLNSEKTDELRTIQGFSTEAGDKLTGEPFYEIWQSYWGAPDYADAFTSAACQGTGAFAGASMVTRSEGCLKGAQYQNVWMYVLHE 509 +GITCA VGG + ++G CVD A G G +G A +AGY+ +DV EH+++DLD + + A F AA Y G S KT LRT+QGFSTEAG KL+GE YE++++YWGA DYAD F +AA GTG + +S + R E KGA YQN WMYV+HE Sbjct: 303 LGITCADVGGYLSSVTDGVPTYVSGAGPCVDAAPTGVVGPNNGAGAGVVAGYAFSTDVSEHAQIDLDQDEFDTLLAAFD---FAAAKDIYENGKFSMKTSGLRTLQGFSTEAGTKLSGEDLYELYRAYWGADDYADQFVTAALDGTGPYVDSSDLVRDEIASKGAAYQNTWMYVIHE 476
BLAST of mRNA_L-elsbetiae_contig19668.5864.1 vs. uniprot
Match: A0A5J4Z9Q0_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z9Q0_PORPP) HSP 1 Score: 130 bits (328), Expect = 2.030e-32 Identity = 71/138 (51.45%), Postives = 92/138 (66.67%), Query Frame = 3 Query: 99 ATDGVFATMAGYSPVSDVVEHSELDLDMADIEENADAVTEAGFTAAFTRYSTGLNSEKTD-ELRTIQGFSTEAGDKLTGEPFYEIWQSYWGAPDYADAFTSAACQGTGAFAGASMVTRSEGCLKGAQYQNVWMYVLHE 509 A G T+AGY+ SDV++ +E+DLDMADI DA + F A T Y GLNS K D +RTI+G ST AG K+TG+P ++ +++YWG+P+Y D F A GTG FA AS + R+E KGAQYQ VWMYV+HE Sbjct: 17 ADHGEGQTIAGYTFESDVIDRAEIDLDMADISSLTDA---SEFVGAKTLYENGLNSVKADGSIRTIRGLSTSAGTKMTGQPTFDTYEAYWGSPNYGDNFVIQALDGTGMFAAASNIFRAECATKGAQYQIVWMYVIHE 151
BLAST of mRNA_L-elsbetiae_contig19668.5864.1 vs. uniprot
Match: R7QBN5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBN5_CHOCR) HSP 1 Score: 124 bits (311), Expect = 1.880e-31 Identity = 63/131 (48.09%), Postives = 91/131 (69.47%), Query Frame = 3 Query: 120 TMAGYSPVSDVVEHSELDLDMADIEENADAVTEA-GFTAAFTRYSTGLNSEKTDELRTIQGFSTEAGDKLTGEPFYEIWQSYWGAPDYADAFTSAACQGTGAFAGASMVTRSEGCLKGAQYQNVWMYVLHE 509 T+AGY+P SDV EH+++DLD D+EE + +T+ + AA YS G +S K++ LRT+QGFST AGDK+ EP++E+++ +W P YAD F + A G G F+G + + R+E KG+QYQ WMYV+HE Sbjct: 25 TLAGYTPDSDVDEHAKIDLDQKDMEEELEELTDKIDWDAARKIYSEGEHSMKSEGLRTLQGFSTSAGDKMKNEPYFELFKKFWRTPRYADDFITKALNGLGDFSGTADMLRAECANKGSQYQATWMYVIHE 155
BLAST of mRNA_L-elsbetiae_contig19668.5864.1 vs. uniprot
Match: A0A7S0H741_9EUKA (Hypothetical protein (Fragment) n=2 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0H741_9EUKA) HSP 1 Score: 103 bits (258), Expect = 5.190e-23 Identity = 79/186 (42.47%), Postives = 98/186 (52.69%), Query Frame = 3 Query: 3 MGITCAQVGGLIDEGNIAGLEACVDGAAGGGGATDGVFATMAGYSPVSDVVEHSELDLDMADIEENADAVTEAGFTAAFTRYSTGLNSEKTDELRTIQGFSTEAGDKL----TGEPF--YEIWQSYWGAPDYADAFTSAACQGTGA-----------FAGASMVTRSEGCLKGAQYQNVWMYVLHE 509 +GITCAQVGGL++ +A DGAA A ATMAGY P SDV EH+++DLD A +E A+ A F A +YS G NSE + RT+QGFST A K+ G P+ YE + Y+G YAD + SAA GT FA R E KG+ Y NVWMY + E Sbjct: 207 LGITCAQVGGLLNG------DAPYDGAA----ACTFQSATMAGYVPGSDVTEHAKIDLDQAAMEA---ALETADFAGAIDKYSNGGNSESKGKFRTLQGFSTGAQRKMYDGCPGCPYKHYEQFYDYYGDFKYADKWVSAALAGTDMTFTSGKHGPNNFATLGDAARVEAVKKGSAYMNVWMYAVRE 379 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19668.5864.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig19668.5864.1 >prot_L-elsbetiae_contig19668.5864.1 ID=prot_L-elsbetiae_contig19668.5864.1|Name=mRNA_L-elsbetiae_contig19668.5864.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=169bp MGITCAQVGGLIDEGNIAGLEACVDGAAGGGGATDGVFATMAGYSPVSDVback to top mRNA from alignment at L-elsbetiae_contig19668:1286..2390+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig19668.5864.1 ID=mRNA_L-elsbetiae_contig19668.5864.1|Name=mRNA_L-elsbetiae_contig19668.5864.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1105bp|location=Sequence derived from alignment at L-elsbetiae_contig19668:1286..2390+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig19668:1286..2390+ >mRNA_L-elsbetiae_contig19668.5864.1 ID=mRNA_L-elsbetiae_contig19668.5864.1|Name=mRNA_L-elsbetiae_contig19668.5864.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1014bp|location=Sequence derived from alignment at L-elsbetiae_contig19668:1286..2390+ (Laminarionema elsbetiae ELsaHSoW15)back to top |