mRNA_L-elsbetiae_contig19668.5863.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig19668.5863.1 vs. uniprot
Match: A0A6H5KYS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYS6_9PHAE) HSP 1 Score: 129 bits (325), Expect = 4.820e-33 Identity = 64/99 (64.65%), Postives = 77/99 (77.78%), Query Frame = 2 Query: 2 VNTALLDMWHTGQEHLLAGECAAAGALIPEMASLMAVPLIQGVQRYLYLADPQGGAGGDKEASELWAFSAAILPWIAECDADVAATVRANSDISVATAP 298 +N+ LL +W TGQ +LLAGEC A A+I E+ LMAVPLIQG+ RY YLADP G GGDKEA+ELWAFSAAILPWI+ CDA V TVR N+++ A+AP Sbjct: 31 INSELLTLWETGQANLLAGECTEASAVIDEILPLMAVPLIQGLLRYTYLADPAIGTGGDKEAAELWAFSAAILPWISACDAAVGTTVRDNTELGSASAP 129
BLAST of mRNA_L-elsbetiae_contig19668.5863.1 vs. uniprot
Match: D8LQ42_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ42_ECTSI) HSP 1 Score: 121 bits (303), Expect = 7.250e-30 Identity = 60/99 (60.61%), Postives = 74/99 (74.75%), Query Frame = 2 Query: 2 VNTALLDMWHTGQEHLLAGECAAAGALIPEMASLMAVPLIQGVQRYLYLADPQGGAGGDKEASELWAFSAAILPWIAECDADVAATVRANSDISVATAP 298 +N+ LL +W TGQ LLA EC A A+I ++ LMAVPLIQG+ RY YLADP G GGDKEA+ELWAFSA+ILPWI+ CDA V VR N+++ A+AP Sbjct: 243 INSELLTLWETGQASLLAEECTEASAVIDQILPLMAVPLIQGLLRYTYLADPAIGTGGDKEAAELWAFSASILPWISTCDAAVGTKVRDNTELGSASAP 341
BLAST of mRNA_L-elsbetiae_contig19668.5863.1 vs. uniprot
Match: D8LFX4_ECTSI (Probable high CO2 inducible periplasmic protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFX4_ECTSI) HSP 1 Score: 111 bits (278), Expect = 5.510e-27 Identity = 56/99 (56.57%), Postives = 74/99 (74.75%), Query Frame = 2 Query: 2 VNTALLDMWHTGQEHLLAGECAAAGALIPEMASLMAVPLIQGVQRYLYLADPQGGAGGDKEASELWAFSAAILPWIAECDADVAATVRANSDISVATAP 298 VN+ +L+++ GQ +LL G+C AAG + ++ LM VPL+QG+ RY Y ADP+ G GGDK A+ELWAFSAA+LP I ECD +VA VRAN+DI+ A AP Sbjct: 232 VNSDMLELYKEGQVYLLDGDCGAAGDVKDKIIDLMGVPLVQGMLRYFYNADPEAGDGGDKAAAELWAFSAAMLPRINECDEEVATLVRANTDIASADAP 330
BLAST of mRNA_L-elsbetiae_contig19668.5863.1 vs. uniprot
Match: D8LDE2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDE2_ECTSI) HSP 1 Score: 87.0 bits (214), Expect = 2.670e-19 Identity = 52/100 (52.00%), Postives = 63/100 (63.00%), Query Frame = 2 Query: 2 VNTALLDMWHTGQEHLLAGECAAAGALIPEMASLMAVPLIQGVQRYLYLADPQGGAGGD-KEASELWAFSAAILPWIAECDADVAATVRANSDISVATAP 298 +N +L++ G +LL G+CA A + LMAV L+QG RYLY ADP GD K +ELWAF+AAILP I EC ADVA TVR+NSDI AP Sbjct: 56 INDDVLELIVAGSGYLLEGKCAEAEDAQGRIVQLMAVLLLQGTLRYLYRADPASDYDGDAKHWAELWAFAAAILPLIDECSADVAHTVRSNSDIDSEHAP 155
BLAST of mRNA_L-elsbetiae_contig19668.5863.1 vs. uniprot
Match: D8LDE3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDE3_ECTSI) HSP 1 Score: 89.0 bits (219), Expect = 1.570e-18 Identity = 51/100 (51.00%), Postives = 62/100 (62.00%), Query Frame = 2 Query: 2 VNTALLDMWHTGQEHLLAGECAAAGALIPEMASLMAVPLIQGVQRYLYLADPQGGAGGD-KEASELWAFSAAILPWIAECDADVAATVRANSDISVATAP 298 +N +L++ G +LL G+CA A + LM VPL+Q RYLY ADP GD K +ELWAF+AAILP I EC ADVA TVR+NSDI AP Sbjct: 232 INDDILELIGAGSGYLLEGKCAEAEEAKESIVQLMTVPLVQATLRYLYRADPASDYDGDAKHWAELWAFAAAILPLIDECSADVAHTVRSNSDIDSEHAP 331
BLAST of mRNA_L-elsbetiae_contig19668.5863.1 vs. uniprot
Match: A0A7S2V1S6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1S6_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 4.710e-17 Identity = 43/93 (46.24%), Postives = 59/93 (63.44%), Query Frame = 2 Query: 2 VNTALLDMWHTGQEHLLAGECAAAGALIPEMASLMAVPLIQGVQRYLYLADPQGGAGGDKEASELWAFSAAILPWIAECDADVAATVRANSDI 280 VN ++D++ G L G+C + + M +PL+QG RYLY ADP+G G+K +ELWAFSAA+LP IAECD+ VA+ +R NS I Sbjct: 462 VNERIIDLFRDGSVKLHNGDCGEVEKVKNAIVDQMTIPLVQGTLRYLYKADPKGANEGNKARAELWAFSAAVLPRIAECDSGVASMLRENSYI 554
BLAST of mRNA_L-elsbetiae_contig19668.5863.1 vs. uniprot
Match: A0A7S1IQR3_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IQR3_9EUGL) HSP 1 Score: 82.4 bits (202), Expect = 3.070e-16 Identity = 45/97 (46.39%), Postives = 57/97 (58.76%), Query Frame = 2 Query: 2 VNTALLDMWHTGQEHLLAGECAAAGALIPEMASLMAVPLIQGVQRYLYLADPQGGAGGDKEASELWAFSAAILPWIAECDADVAATVRANSDISVAT 292 VN A+L ++ GQ L+AG C AA A +A M VP++QG+ RY + ADP G G KE +E WAF+ ILP I C AA VR N DI+ T Sbjct: 213 VNAAVLQLFKDGQALLVAGSCDAAQAKADAIARQMLVPMLQGMLRYAWKADPVNGVSGPKEVAEGWAFTRGILPQIHSCSPRAAAVVRRNMDIAAGT 309
BLAST of mRNA_L-elsbetiae_contig19668.5863.1 vs. uniprot
Match: A0A8J2WQT1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WQT1_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 1.590e-13 Identity = 45/113 (39.82%), Postives = 61/113 (53.98%), Query Frame = 2 Query: 2 VNTALLDMWHTGQEHLLAGECAAAGALIPEMASLMAVPLIQGVQRYLYLADPQGGAG-------------GD---KEASELWAFSAAILPWIAECDADVAATVRANSDISVAT 292 VN LL + G++ ++A +CA A L+ ++ LM VPL+QG +Y Y ADP G D K +E WAF+AA+LP IAECD VA +R + DI AT Sbjct: 934 VNVQLLAKFIEGRDKIIAADCAGAEPLVEDIRKLMTVPLVQGTLKYAYKADPANAGGECVADAGMNAMTASDGCVKSWAEAWAFAAAVLPQIAECDWGVAEKIRYSLDIEAAT 1046
BLAST of mRNA_L-elsbetiae_contig19668.5863.1 vs. uniprot
Match: A0A7S1IQD7_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IQD7_9EUGL) HSP 1 Score: 70.9 bits (172), Expect = 3.510e-12 Identity = 42/100 (42.00%), Postives = 58/100 (58.00%), Query Frame = 2 Query: 2 VNTALLDMWHTGQEHLLAGECAAAGALIPEMASLMAVPLIQGVQRYLYLADP---QGGAGGDKEASELWAFSAAILPWIAECDADVAATVRANSDISVAT 292 VN A+L ++ GQ L+AG C AA A +A M VP++QG+ RY + ADP + G KE +E WAF+ ILP + C+ A V+ N DI+ AT Sbjct: 213 VNAAVLQLFKDGQALLVAGSCDAAQAKADAIARQMLVPMLQGMLRYAWKADPANSEEARRGPKEYAEGWAFARGILPQLDSCNPQGATLVQRNMDIAAAT 312
BLAST of mRNA_L-elsbetiae_contig19668.5863.1 vs. uniprot
Match: A0A8J2SAQ3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SAQ3_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 1.250e-9 Identity = 37/106 (34.91%), Postives = 58/106 (54.72%), Query Frame = 2 Query: 5 NTALLDMWHTGQEHLLAGECAAAGALIPEMASLMAVPLIQGVQRYLYLADPQ--GGAGGD-------------KEASELWAFSAAILPWIAECDADVAATVRANSD 277 N L+ + +G++ ++A +CA A +I ++ M +PLIQG +Y + ADP G D K +E WAF+AA+LP + +CD +VA+ VR N D Sbjct: 260 NVGLVTDFKSGRDKIIAADCAGAEPVIDDIIKKMTIPLIQGTIKYAWKADPANAGDCSADAGKTALTASDDCVKSWTEGWAFAAALLPQLDQCDPEVASVVRHNLD 365 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19668.5863.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig19668.5863.1 >prot_L-elsbetiae_contig19668.5863.1 ID=prot_L-elsbetiae_contig19668.5863.1|Name=mRNA_L-elsbetiae_contig19668.5863.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=92bp MWHTGQEHLLAGECAAAGALIPEMASLMAVPLIQGVQRYLYLADPQGGAGback to top mRNA from alignment at L-elsbetiae_contig19668:605..1233+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig19668.5863.1 ID=mRNA_L-elsbetiae_contig19668.5863.1|Name=mRNA_L-elsbetiae_contig19668.5863.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=629bp|location=Sequence derived from alignment at L-elsbetiae_contig19668:605..1233+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig19668:605..1233+ >mRNA_L-elsbetiae_contig19668.5863.1 ID=mRNA_L-elsbetiae_contig19668.5863.1|Name=mRNA_L-elsbetiae_contig19668.5863.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=552bp|location=Sequence derived from alignment at L-elsbetiae_contig19668:605..1233+ (Laminarionema elsbetiae ELsaHSoW15)back to top |