mRNA_L-elsbetiae_contig1966.5859.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1966.5859.1 vs. uniprot
Match: A0A6H5KJQ1_9PHAE (DHQ_synthase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJQ1_9PHAE) HSP 1 Score: 181 bits (460), Expect = 4.040e-52 Identity = 95/137 (69.34%), Postives = 103/137 (75.18%), Query Frame = 1 Query: 1 IEMVPAADIMHGEAVNVDGFLCLVIAKRRSMIPQQVLDRVFRVMQSIGLPTIHEGLVVRPCIKYLTKFPPPPYMSASSAPLASSSARQGLADAVEHRHGKQRVPLLKGGVGSSVCVNDISADELKGAIAEAWAMHGD 411 IEM PAADIMHGEAVNVDGFLCLVIAKRR MI + VLDRVFRVM+SIGLPTIHE + + P +K GLADAVEHRHGKQRVPLLKGG+GSSVCVNDI+ DELKGAIAEAWA+HGD Sbjct: 399 IEMEPAADIMHGEAVNVDGFLCLVIAKRRGMITEAVLDRVFRVMKSIGLPTIHESVQLAPMVK-------------------------GLADAVEHRHGKQRVPLLKGGIGSSVCVNDINPDELKGAIAEAWALHGD 510
BLAST of mRNA_L-elsbetiae_contig1966.5859.1 vs. uniprot
Match: A0A7S0FNL6_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FNL6_9STRA) HSP 1 Score: 111 bits (277), Expect = 8.040e-29 Identity = 62/130 (47.69%), Postives = 78/130 (60.00%), Query Frame = 1 Query: 1 IEMVPAADIMHGEAVNVDGFLCLVIAKRRSMIPQQVLDRVFRVMQSIGLPTIHEGLVVRPCIKYLTKFPPPPYMSASSAPLASSSARQGLADAVEHRHGKQRVPLLKGGVGSSVCVNDISADELKGAIAE 390 +EMVP ADIMHGEAVNVDGF C+V+A R I + V+DRVF VMQS+ LPT +S L S A Q DA+EHRHG+QR+PL+ +G S+CV+DI+ DEL A+ E Sbjct: 12 LEMVPGADIMHGEAVNVDGFFCVVLAYLRGFITKDVVDRVFAVMQSLSLPT-------------------------NSPDLESKLAWQSCKDAIEHRHGEQRIPLITD-IGESICVSDITPDELDRALEE 115
BLAST of mRNA_L-elsbetiae_contig1966.5859.1 vs. uniprot
Match: A0A835YRH6_9STRA (DHQ_synthase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRH6_9STRA) HSP 1 Score: 119 bits (298), Expect = 1.050e-28 Identity = 66/135 (48.89%), Postives = 85/135 (62.96%), Query Frame = 1 Query: 1 IEMVPAADIMHGEAVNVDGFLCLVIAKRRSMIPQQVLDRVFRVMQSIGLPTIHEGLVVRPCIKYLTKFPPPPYMSASSAPLASSSARQGLADAVEHRHGKQRVPLLKGGVGSSVCVNDISADELKGAIAEAWAMH 405 +EM P AD+MHGEAVNVDG LC+V+A R +I V DRVF M+ +GLPT+H + + A LA QGLADAV+HR+G QR+PLL G +G++VCVNDI+ EL+ A A+ WAMH Sbjct: 425 LEMEPGADLMHGEAVNVDGALCVVLAANRGLISAAVRDRVFAAMRGVGLPTLHPAV--------------------TPAALA-----QGLADAVQHRNGAQRIPLLTG-IGAAVCVNDITPAELEVACAQLWAMH 533
BLAST of mRNA_L-elsbetiae_contig1966.5859.1 vs. uniprot
Match: A0A7S3YJ31_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YJ31_HETAK) HSP 1 Score: 114 bits (286), Expect = 3.750e-27 Identity = 62/135 (45.93%), Postives = 83/135 (61.48%), Query Frame = 1 Query: 1 IEMVPAADIMHGEAVNVDGFLCLVIAKRRSMIPQQVLDRVFRVMQSIGLPTIHEGLVVRPCIKYLTKFPPPPYMSASSAPLASSSARQGLADAVEHRHGKQRVPLLKGGVGSSVCVNDISADELKGAIAEAWAMH 405 IEM P ADIMHGEAVN+DGFLC+V++ RR MI DR+F M+++ LPT + + + +K GLADAVEHRHG QR+PL+ +G SVCVND+S +EL+GA+A+ A+H Sbjct: 364 IEMQPGADIMHGEAVNLDGFLCVVLSHRRGMITAAQRDRIFAAMRALNLPTTCDFMTIDVMMK-------------------------GLADAVEHRHGAQRIPLIDD-IGHSVCVNDLSREELEGALADLAALH 472
BLAST of mRNA_L-elsbetiae_contig1966.5859.1 vs. uniprot
Match: A0A1Z5J835_FISSO (3-dehydroquinate synthase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J835_FISSO) HSP 1 Score: 111 bits (278), Expect = 6.260e-26 Identity = 62/128 (48.44%), Postives = 79/128 (61.72%), Query Frame = 1 Query: 1 IEMVPAADIMHGEAVNVDGFLCLVIAKRRSMIPQQVLDRVFRVMQSIGLPTIHEGLVVRPCIKYLTKFPPPPYMSASSAPLASSSARQGLADAVEHRHGKQRVPLLKGGVGSSVCVNDISADELKGAI 384 +EMVP ADIMHGEAVNVDGF C VI+ R IP++ +DRVF+ M+SIGLPT +SA L S A Q DAVEHRHG+QR+PL+ +G S+CV+DI+ +EL A+ Sbjct: 421 LEMVPGADIMHGEAVNVDGFFCCVISFLRGYIPRETVDRVFKCMKSIGLPT-------------------------NSADLDSELAWQSCKDAVEHRHGEQRIPLITD-IGESICVSDITPEELDRAL 522
BLAST of mRNA_L-elsbetiae_contig1966.5859.1 vs. uniprot
Match: W7TM66_9STRA (3-dehydroquinate synthase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TM66_9STRA) HSP 1 Score: 103 bits (258), Expect = 8.930e-26 Identity = 57/140 (40.71%), Postives = 87/140 (62.14%), Query Frame = 1 Query: 1 IEMVPAADIMHGEAVNVDGFLCLVIAKRRSMIPQQVLDRVFRVMQSIGLPT-IHEGLVVRPCIKYLTKFPPPPYMSASSAPLASSSAR---QGLADAVEHRHGKQRVPLLKGGVGSSVCVNDISADELKGAIAEAWAMHG 408 +EM+P D+MHGEAVN+DGF +++A+RR + DR+F+VM++IGLPT + G P + + + +GL DAVEHRHG+QR+PL+ G +G SVCV+D++ +EL+GA+ E + +HG Sbjct: 1 MEMLPDVDLMHGEAVNIDGFFSVLLARRRGLCSLSERDRIFKVMRAIGLPTMVPRGT---PSLXXXXXXXXXXXXXXXXXXXQAEMVKMLWKGLEDAVEHRHGQQRLPLIVG-LGHSVCVSDVTREELEGAVDELYDVHG 136
BLAST of mRNA_L-elsbetiae_contig1966.5859.1 vs. uniprot
Match: A0A2V3J638_9FLOR (2-epi-5-epi-valiolone synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J638_9FLOR) HSP 1 Score: 107 bits (266), Expect = 1.440e-24 Identity = 60/135 (44.44%), Postives = 79/135 (58.52%), Query Frame = 1 Query: 1 IEMVPAADIMHGEAVNVDGFLCLVIAKRRSMIPQQVLDRVFRVMQSIGLPTIHEGLVVRPCIKYLTKFPPPPYMSASSAPLASSSARQGLADAVEHRHGKQRVPLLKGGVGSSVCVNDISADELKGAIAEAWAMH 405 +EMV +MHGEAVN+DGFLC+++A R+ I Q+ DRVF M++IGLPT H +K LTK +AD VEHRHGK R+PL+KG +GS VN+ S D+LK IA+A +H Sbjct: 307 LEMVANPPVMHGEAVNIDGFLCILLAHRKGWISTQLRDRVFSAMKNIGLPTWHPACD----LKVLTK---------------------AIADGVEHRHGKLRMPLVKGNIGSYGFVNECSEDDLKHVIAQAHQLH 416
BLAST of mRNA_L-elsbetiae_contig1966.5859.1 vs. uniprot
Match: A0A4D9D105_9STRA (DHQ_synthase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D105_9STRA) HSP 1 Score: 106 bits (264), Expect = 6.620e-24 Identity = 57/137 (41.61%), Postives = 84/137 (61.31%), Query Frame = 1 Query: 1 IEMVPAADIMHGEAVNVDGFLCLVIAKRRSMIPQQVLDRVFRVMQSIGLPT-IHEGLVVRPCIKYLTKFPPPPYMSASSAPLASSSARQGLADAVEHRHGKQRVPLLKGGVGSSVCVNDISADELKGAIAEAWAMHG 408 +EM+P D+MHGEAVN+DGF +++A+RR + DR+F+VM++IGLPT + G P +GL DAVEHRHG+QR+PL+ G +G SVCV+D++ +EL+GA+ E + +HG Sbjct: 473 MEMLPDVDLMHGEAVNIDGFFSVLLARRRGLCSLSERDRIFKVMRAIGLPTMVPRGPSSLPXXXXXXXXXXXXXXXXXXXXEMVKMLWKGLEDAVEHRHGQQRLPLIVG-LGHSVCVSDVTREELEGAVDELYDVHG 608
BLAST of mRNA_L-elsbetiae_contig1966.5859.1 vs. uniprot
Match: A0A6U0RRJ8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0RRJ8_9STRA) HSP 1 Score: 105 bits (263), Expect = 7.610e-24 Identity = 58/128 (45.31%), Postives = 79/128 (61.72%), Query Frame = 1 Query: 1 IEMVPAADIMHGEAVNVDGFLCLVIAKRRSMIPQQVLDRVFRVMQSIGLPTIHEGLVVRPCIKYLTKFPPPPYMSASSAPLASSSARQGLADAVEHRHGKQRVPLLKGGVGSSVCVNDISADELKGAI 384 +EMVP ADIMHGEAVNVDGFLC+V++ R I + ++RVF+ M+S+ LPT +S+ L S A Q DAVEHRHG+QR+PL+ +G S+CV+DI+++EL AI Sbjct: 428 LEMVPGADIMHGEAVNVDGFLCIVLSFLRGYIDMKTVNRVFKCMKSLSLPT-------------------------NSSDLTSELAWQSCKDAVEHRHGEQRIPLITE-IGESICVSDITSEELNRAI 529
BLAST of mRNA_L-elsbetiae_contig1966.5859.1 vs. uniprot
Match: A0A8J9WYN3_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9WYN3_PHATR) HSP 1 Score: 102 bits (253), Expect = 2.390e-23 Identity = 57/132 (43.18%), Postives = 76/132 (57.58%), Query Frame = 1 Query: 1 IEMVPAADIMHGEAVNVDGFLCLVIAKRRSMIPQQVLDRVFRVMQSIGLPTIHEGLVVRPCIKYLTKFPPPPYMSASSAPLASSSARQGLADAVEHRHGKQRVPLLKGGVGSSVCVNDISADELKGAIAEAW 396 +EMVP ADIMHGEAVNVDGF C +++ R IP++ + RV MQS+ LPT SA L + A Q DAVEHRHG+QR+PL+ +G S+CV+DI+ +EL A+ + W Sbjct: 200 LEMVPGADIMHGEAVNVDGFFCCILSYLRGYIPRETVQRVLNCMQSLALPT-------------------------HSADLNPTLAWQSCKDAVEHRHGEQRIPLITE-IGESICVSDITQEELSRAL-DVW 304 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1966.5859.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1966.5859.1 >prot_L-elsbetiae_contig1966.5859.1 ID=prot_L-elsbetiae_contig1966.5859.1|Name=mRNA_L-elsbetiae_contig1966.5859.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=143bp MVPAADIMHGEAVNVDGFLCLVIAKRRSMIPQQVLDRVFRVMQSIGLPTIback to top mRNA from alignment at L-elsbetiae_contig1966:1040..2045+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1966.5859.1 ID=mRNA_L-elsbetiae_contig1966.5859.1|Name=mRNA_L-elsbetiae_contig1966.5859.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1006bp|location=Sequence derived from alignment at L-elsbetiae_contig1966:1040..2045+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1966:1040..2045+ >mRNA_L-elsbetiae_contig1966.5859.1 ID=mRNA_L-elsbetiae_contig1966.5859.1|Name=mRNA_L-elsbetiae_contig1966.5859.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=858bp|location=Sequence derived from alignment at L-elsbetiae_contig1966:1040..2045+ (Laminarionema elsbetiae ELsaHSoW15)back to top |