mRNA_L-elsbetiae_contig196.5839.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig196.5839.1 vs. uniprot
Match: D7G5Y3_ECTSI (Heat shock protein 40 like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y3_ECTSI) HSP 1 Score: 199 bits (506), Expect = 9.340e-52 Identity = 106/210 (50.48%), Postives = 141/210 (67.14%), Query Frame = 2 Query: 3698 RSDVEEAISCANEALAISPNHALAQSLLLDALQLGQR-WAQARQKCEGWACQLNACNWVVGEDLELAGFEEGGGPPRVCVRAMHAPLRVGYCTALRNDGLVGHFVDAIGGACTTGVTWPREMLMRYEDGMCKKELADQAYKSQSFDEAFDRCSEALRVDLLDHQANAVLFANRAAVLMNLGRDSEALQDCQEALRRKPDYPEVLECRARI 4324 R ++E AI CA ALA++PN AQ L+LDAL+ G+R W +A+++CE WA + C++ G + LAG+ EGGGPP +C+ AMHA L+ GYC ALRN G F +A+ A TGV W M R +D M KKE A +AY S + A + SEA+ VD D+ NA+LFANRAA LMNL R+ +AL+DC EALR KP+YP+VL +AR+ Sbjct: 15 RKEIERAIDCAERALALAPNLESAQKLILDALEQGRRQWEEAQRRCEVWAHKRANCDFESGRN-NLAGYAEGGGPPELCIAAMHASLQEGYCKALRNAGQTDKFKEALAAATGTGVPWAMSMTRRRQDVMDKKERAGKAYASNRYRLAHELYSEAICVDPQDYYTNALLFANRAAALMNLARNKDALKDCIEALRLKPNYPKVLLRKARL 223
BLAST of mRNA_L-elsbetiae_contig196.5839.1 vs. uniprot
Match: D7G9I6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9I6_ECTSI) HSP 1 Score: 113 bits (283), Expect = 8.650e-23 Identity = 79/178 (44.38%), Postives = 102/178 (57.30%), Query Frame = 2 Query: 3194 LQRLRHQTNLDRDGAIQAFTESASKASFVAAATRCSTAILSFEKLVEHIAECGDEYGNRGT-RADGIERSTLSPLLWRRGAAHVNVGRYRSAVKDFEAAIELGCKFKEKNFLRMGVALLRAGDLPEAKEMFSKGIGIKNFGQPY--------RDCKQGIANAIAVESHVNTGFAALER 3700 L+RLR + D++ A + + ES S F AAA +TAI S E L+ HI GDE GNRG ADG R L+PL W R AAH+ +GRYRSAVKD A+E + ++ + RMG AL+ AGDL EA + + GI K P+ ++C GIAN AV HV G AL+R Sbjct: 241 LERLRKRHESDKESARRTYMESKS---FEAAALEYTTAIRSLEDLLFHIKLHGDERGNRGEGAADGGGRKRLAPLYWSRAAAHIMIGRYRSAVKDCALALESAADW-DQAYPRMGKALMLAGDLGEADKAYRLGILQKT---PFTEDDVRRNKECNLGIANVHAVRVHVENGKVALKR 411
BLAST of mRNA_L-elsbetiae_contig196.5839.1 vs. uniprot
Match: D8LPT8_ECTSI (KIX_2 domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPT8_ECTSI) HSP 1 Score: 98.2 bits (243), Expect = 2.210e-18 Identity = 48/74 (64.86%), Postives = 58/74 (78.38%), Query Frame = 2 Query: 1556 TVDGLSWQSNNDVPSRKEILSKIVTFLQQLWPNEPPDAMQNTPVLAKCLEADLYGDANTFKEYIDHATLVHRLQ 1777 T +GLSWQSNND+PSRKEILSKIVT+LQQ PN P+ +Q P++AK LE LY +A +F+EY DHATL RLQ Sbjct: 48 TGNGLSWQSNNDIPSRKEILSKIVTYLQQRKPNARPEWIQKVPLMAKRLEDSLYRNAKSFQEYKDHATLRQRLQ 121
BLAST of mRNA_L-elsbetiae_contig196.5839.1 vs. uniprot
Match: A0A6H5KPY4_9PHAE (Histone acetyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY4_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 1.500e-16 Identity = 48/74 (64.86%), Postives = 57/74 (77.03%), Query Frame = 2 Query: 1556 TVDGLSWQSNNDVPSRKEILSKIVTFLQQLWPNEPPDAMQNTPVLAKCLEADLYGDANTFKEYIDHATLVHRLQ 1777 T +GL WQSNND+PSRKEILSKIVT+LQQ PN P+ +Q P++AK LE LY +A +FKEY DHATL RLQ Sbjct: 435 TGNGLIWQSNNDIPSRKEILSKIVTYLQQRKPNARPEWIQKVPLMAKRLEESLYRNAKSFKEYKDHATLRQRLQ 508
BLAST of mRNA_L-elsbetiae_contig196.5839.1 vs. uniprot
Match: A0A835Z250_9STRA (KIX_2 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z250_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 1.800e-12 Identity = 38/68 (55.88%), Postives = 48/68 (70.59%), Query Frame = 2 Query: 1574 WQSNNDVPSRKEILSKIVTFLQQLWPNEPPDAMQNTPVLAKCLEADLYGDANTFKEYIDHATLVHRLQ 1777 WQSNND+P RK+ILS+IV +LQQ PN P+ ++ P++AK LE LY +A TF EY D TL RLQ Sbjct: 60 WQSNNDIPHRKKILSRIVVYLQQRKPNARPEWIKKVPLMAKRLEDSLYRNAATFAEYNDMNTLRARLQ 127
BLAST of mRNA_L-elsbetiae_contig196.5839.1 vs. uniprot
Match: A0A1V9ZSB0_9STRA (J domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZSB0_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 2.290e-12 Identity = 94/349 (26.93%), Postives = 154/349 (44.13%), Query Frame = 2 Query: 3317 FEKLVEHIAECGDEYGNRGTRADGIERSTLSPLLWRRGAAHVNVGRYRSAVKDFEAAIELGCKFKEKNFLRMGVALLRAGDLPEAKEMFSKGIGIKNFGQP-------YR-DCKQGIANAIAVESHVNTGFAALERSDVEEAISCANEALAISPN----HALAQSLLLDALQLGQRWAQARQKCEGWACQLNACNWVVGEDLELAGFEEGGGPPRVCVRAMHAPLRVGYCTALRNDGLVGHFVDAIGGACTTGVTWPREMLMRYEDGMCKKELADQAYKSQSFDEAFDRCSEALRVDLLDHQANAVLFANRAAVLMNLGRDSEALQDCQEALRRKPDYPEVLECRARIF 4327 +++ VEH + G + + D + + L+ +L R AA++ + + R A++D AA+ + + +R G L GD EA+ F +GI P YR + G+ + A S N A + D + A+ A+ AL +P H +LLL Q G A +++ + L+A G D+ L + R++H VG + ++ DA + GV +++ + D K + + A+ +F A + S L +D NAVL+ NRAA LM LG+ ++AL DCQEAL RKP YP +AR + Sbjct: 369 YDQAVEHYSR-GIQSLREEPQYDAVV-AELAKMLSNRAAAYMMLHKIRDALQDARAAVGADPSYLRAH-VRCGRCYLLLGDFFEARNAF---VGIYKLLVPSATDTDVYRTQARDGVKDVEAFVSFANEAKWAHDVLDYKGALRAASRALTFAPYSRDLHLQKMTLLLALQQYGDAVAHMKEQLK-----LHATVAAHGIDVGL-----------LYARSLHYADDVGAA-----EEVLKELEDAA--PTSKGVLKTKQL---WSDMKQAKAMGNDAFSCGNFQRAANFYSAGLSLDASHDSYNAVLYCNRAAALMGLGKHAQALADCQEALARKPAYPRAQLRQARCY 685
BLAST of mRNA_L-elsbetiae_contig196.5839.1 vs. uniprot
Match: A0A835Z470_9STRA (KIX_2 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z470_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 3.450e-11 Identity = 35/68 (51.47%), Postives = 48/68 (70.59%), Query Frame = 2 Query: 1574 WQSNNDVPSRKEILSKIVTFLQQLWPNEPPDAMQNTPVLAKCLEADLYGDANTFKEYIDHATLVHRLQ 1777 WQS++DVP R++ILS+IV +L Q PN P+ ++ P++AK LE LY DA +F EY D +TL RLQ Sbjct: 10 WQSDDDVPHRRKILSRIVLYLHQRRPNAHPEWVEKVPLMAKRLEDALYRDAASFAEYNDMSTLRARLQ 77
BLAST of mRNA_L-elsbetiae_contig196.5839.1 vs. uniprot
Match: A0A1V9ZK32_9STRA (Histone acetyltransferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZK32_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 2.990e-10 Identity = 40/84 (47.62%), Postives = 54/84 (64.29%), Query Frame = 2 Query: 1571 SWQSNNDVPSRKEILSKIVTFLQQLWPNEPPDAMQNTPVLAKCLEADLYGDANTFKEYIDHATLVHRLQLQLY-INRFKQATAG 1819 +WQS ND PSR+E++++I+ FLQ PN PPD M+ P +AK LE LY +A + EY+D ATL RLQ+ + KQ T G Sbjct: 155 TWQSPNDNPSRREVITRIIHFLQSQKPNAPPDWMRRLPQMAKKLEESLYRNATSKAEYMDTATLKQRLQVVARSFHTIKQQTQG 238
BLAST of mRNA_L-elsbetiae_contig196.5839.1 vs. uniprot
Match: T0R1I4_SAPDV (Histone acetyltransferase n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R1I4_SAPDV) HSP 1 Score: 76.6 bits (187), Expect = 3.930e-10 Identity = 41/89 (46.07%), Postives = 57/89 (64.04%), Query Frame = 2 Query: 1571 SWQSNNDVPSRKEILSKIVTFLQQLWPNEPPDAMQNTPVLAKCLEADLYGDANTFKEYIDHATLVHRLQLQLY-INRFKQATAGQASAE 1834 +WQS ND PSR+E++++I+ FLQ PN PPD M+ P +AK LE LY +A + EY+D TL RLQ+ + KQATA A+ + Sbjct: 173 TWQSPNDNPSRREVITRIIHFLQSQKPNAPPDWMRRLPQMAKKLEESLYRNAASKAEYMDPNTLKQRLQVVARSFHTMKQATATPATPQ 261
BLAST of mRNA_L-elsbetiae_contig196.5839.1 vs. uniprot
Match: A0A1V9YSB9_9STRA (Histone acetyltransferase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YSB9_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 1.930e-9 Identity = 35/70 (50.00%), Postives = 50/70 (71.43%), Query Frame = 2 Query: 1571 SWQSNNDVPSRKEILSKIVTFLQQLWPNEPPDAMQNTPVLAKCLEADLYGDANTFKEYIDHATLVHRLQL 1780 +WQS ND P R+E++++IV FLQ PN PPD M+ P +AK LE LY +A++ +EY+D +TL RLQ+ Sbjct: 19 TWQSPNDNPIRREVITRIVHFLQSQKPNAPPDWMRRLPQMAKKLEESLYRNASSKQEYMDTSTLKQRLQV 88 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig196.5839.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig196.5839.1 >prot_L-elsbetiae_contig196.5839.1 ID=prot_L-elsbetiae_contig196.5839.1|Name=mRNA_L-elsbetiae_contig196.5839.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1057bp MMKLDLPENLFSLGDTAVPPYVSVDRIIPVHPPAPVKEDTPVETPVECPVback to top mRNA from alignment at L-elsbetiae_contig196:27436..46426- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig196.5839.1 ID=mRNA_L-elsbetiae_contig196.5839.1|Name=mRNA_L-elsbetiae_contig196.5839.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=18991bp|location=Sequence derived from alignment at L-elsbetiae_contig196:27436..46426- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig196:27436..46426- >mRNA_L-elsbetiae_contig196.5839.1 ID=mRNA_L-elsbetiae_contig196.5839.1|Name=mRNA_L-elsbetiae_contig196.5839.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=6342bp|location=Sequence derived from alignment at L-elsbetiae_contig196:27436..46426- (Laminarionema elsbetiae ELsaHSoW15)back to top |