mRNA_L-elsbetiae_contig1955.5819.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1955.5819.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE) HSP 1 Score: 149 bits (376), Expect = 1.620e-39 Identity = 83/184 (45.11%), Postives = 120/184 (65.22%), Query Frame = 1 Query: 4 YSALDWACHRGRVSIIQALLQGGADVNSRNDINCFSALHRAACNDQAESVDALVEAGADMEIKSNFETTPLCVAATEGKPKALLALLQKGATISAQDNEGETPLRLACR-AQREGIEVVVRILLRWGADETALDSDGNSVDGLLGNVNDGRTCP--PEEIERVRLLLARAPADRAWRRHGWLAM 546 YS LD+A +G +++A+LQ G DVN R D +++LH AA N++ ++D LVEAGA +E++ + + TP A + +A LAL + GA I A+D GETPL +A R A R+G+ +V +LLR GADETAL+ DG + ++G+ + CP +++ERVR LL APADRAWRR G L + Sbjct: 157 YSVLDFAAQKGDACVLRAILQHGVDVNRRTD--GYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACSNHCHEAALALFKHGANIEARDMRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVL 338
BLAST of mRNA_L-elsbetiae_contig1955.5819.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI) HSP 1 Score: 145 bits (366), Expect = 2.830e-38 Identity = 81/184 (44.02%), Postives = 118/184 (64.13%), Query Frame = 1 Query: 4 YSALDWACHRGRVSIIQALLQGGADVNSRNDINCFSALHRAACNDQAESVDALVEAGADMEIKSNFETTPLCVAATEGKPKALLALLQKGATISAQDNEGETPLRLACR-AQREGIEVVVRILLRWGADETALDSDGNSVDGLLGNVNDGRTCP--PEEIERVRLLLARAPADRAWRRHGWLAM 546 YS LD A +G +++A+LQ G DVN R D +++LH AA N++ ++D LVEAGA +E++ + + TP A +A LAL + G+ I A+D GETPL +A R A R+G+ +V +LLR GADETAL+ DG + ++G+ + CP +++ERVR LL AP DRAWRR G+L + Sbjct: 108 YSVLDLAAQKGDACVLRAILQHGVDVNRRTD--GYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACINHCHEAALALYKHGSNIEARDIRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVL 289
BLAST of mRNA_L-elsbetiae_contig1955.5819.1 vs. uniprot
Match: D7FSI6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSI6_ECTSI) HSP 1 Score: 129 bits (323), Expect = 2.030e-32 Identity = 77/181 (42.54%), Postives = 107/181 (59.12%), Query Frame = 1 Query: 22 ACHRGRVSIIQALLQGGADVNSRN-DINCFSALHRAACNDQAESVDALVEAGADMEIKS----NFETTPLCVAATEGKPKALLALLQKGATISAQDNEGETPLRLACRAQREGIEVVVRILLRWGADETALDSDGNSVDGLLGNVNDGRTCPPEEIERVRLLLARAPADRAWRRHGWLAML 549 A G V +I+A L+ G D +S+ + ++ALH+AA ++QAE+V+ L+EAGAD +++S TPL AA +AL LL+ GA + D+ G PL LA Q G+ VV +LLRWGA ETA++ GN+ + + R EE +LLARAPADRAWRR GW+ ML Sbjct: 174 ATQLGHVGVIKAFLEHGVDASSQACPASGWTALHQAALDNQAEAVEVLLEAGADADVESLPGSPCYDTPLLAAAESMSNEALRVLLRNGADPNKPDDNGSMPLHLAAHEQTPGVMEVVDLLLRWGASETAVNKHGNTPAEVFQRLAIHRPDATEERAGALVLLARAPADRAWRRRGWVVML 354
BLAST of mRNA_L-elsbetiae_contig1955.5819.1 vs. uniprot
Match: D8LBP9_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBP9_ECTSI) HSP 1 Score: 122 bits (305), Expect = 3.490e-29 Identity = 78/215 (36.28%), Postives = 106/215 (49.30%), Query Frame = 1 Query: 1 GYSALDWACHRGRVSIIQALLQGGADVNSRND---------------------------INC----FSALHRAACNDQAESVDALVEAGADMEIKSNFETTPLCVAATEGKP-KALLALLQKGATISAQDNEGETPLRLACRAQREGIEVVVRILLRWGADETALDSDGNSVDGLLGNVNDGRTCPPEEIERVRLLLARAPADRAWRRHGWLAML 549 G S L A RG +S ++ LL GADV+ R +N ++ALH +QA ++D L++AGADM+ K +TPLCVA G +A+ LL++G +S ++ T L LAC G + +V +LLRWG E LD GN+ LL + E+ER +LLA APADRAWRR WL ML Sbjct: 204 GLSPLTVASQRGHLSTVKTLLNAGADVSMRTGHRNSXXXXXXXXXXXXXXXXXXXXXXXVNASKHGYTALHAGCAMNQAGAMDVLLDAGADMDRKCYGASTPLCVAIEFGASVQAVHTLLRRGCQVSGPMDK--TMLHLACMTMAPGFDAIVDLLLRWGVSELTLDKGGNTPAALLSVAEGSSSRKAREVERAHVLLANAPADRAWRRRSWLVML 416
BLAST of mRNA_L-elsbetiae_contig1955.5819.1 vs. uniprot
Match: D8LS36_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS36_ECTSI) HSP 1 Score: 121 bits (304), Expect = 3.520e-29 Identity = 65/116 (56.03%), Postives = 77/116 (66.38%), Query Frame = 1 Query: 211 PLCVAATEGKPKALLALLQKGATISAQDNEGETPLRLACRAQREGIEVVVRILLRWGADETALDSDGNSVDGLLG---NVNDGRTCPPEEIERVRLLLARAPADRAWRRHGWLAML 549 PL A KA+ LL GA+++AQD EG TPL +AC Q +G+E V +LLRWGADETAL++ G + GLL N ND TC EI RVR+LLARAPADRAWRR WL ML Sbjct: 309 PLFSATDPRNLKAMHTLLWHGASLTAQDTEGNTPLHVACYRQHKGLEAPVDLLLRWGADETALNNAGKTPAGLLDEHDNENDRTTCSEAEINRVRMLLARAPADRAWRRRCWLVML 424
BLAST of mRNA_L-elsbetiae_contig1955.5819.1 vs. uniprot
Match: D7FLL7_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLL7_ECTSI) HSP 1 Score: 117 bits (294), Expect = 1.010e-27 Identity = 72/161 (44.72%), Postives = 98/161 (60.87%), Query Frame = 1 Query: 79 VNSRNDINCFSALHRAAC-NDQA-ESVDALVEAGADMEIKSNFETTPLCVAATEGKPKALLALLQKGATISAQ-DNEGETPLRLACRAQREGIEVVVRILLRWGADETALDSDGNSVDGLLGNVN-DGRTCPPEEIERVRLLLARAPADRAWRRHGWLAML 549 V++++ C +ALH A +D+A +V LV+A AD E+KS TPL AA + + ALLQ A++ + D G+TPL AC QREG+ + +LLRWGADETA + G + +LG D C P+E++R RLLL RAP DR WRR GWL +L Sbjct: 266 VDAQDRAGC-TALHTAILFSDRAGPAVHMLVKARADTELKSVGGWTPLHAAAEHHRVNCVAALLQNNASVRNRFDATGDTPLHRACVEQREGLAASIDLLLRWGADETARNKRGRTPLDVLGATRTDNPHCSPDEVDRARLLLVRAPTDRRWRRRGWLVVL 425
BLAST of mRNA_L-elsbetiae_contig1955.5819.1 vs. uniprot
Match: A0A6H5KFY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFY7_9PHAE) HSP 1 Score: 113 bits (282), Expect = 7.820e-27 Identity = 75/175 (42.86%), Postives = 102/175 (58.29%), Query Frame = 1 Query: 22 ACHRGRVSIIQALLQGGADVNSRNDINCFSALHRAACNDQAESVDALVEAGADMEIKSNFETTPLCVAATEGKPKALLALLQKGATISAQDN-EGETPLRLACRAQREGIEVVVRILLRWGADETALDSDGNSVDGLLGN-VNDGRTCPPEEIERVRLLLARAPADRAWRRHGWL 540 A R V+II ALL GADVN H AA ++ A ++ AL +AG +E +S TPL AA G +A+LALLQ GA +++++ G +PL C A REG +LLRWGADETA+DSD ++ ++ + + + +ERV LLARAP DRAWRR G+L Sbjct: 65 AVKRNHVAIINALLAEGADVNFLTTRRPVPLAHIAALHNNAAAMPALFKAGVYIEGRSPKGRTPLQNAAFCGSCEAMLALLQLGANVNSKNTINGLSPL---CSACREGHHDAADLLLRWGADETAVDSDEKTIVSMMTHRIFRAAVASRQRLERVSELLARAPQDRAWRRRGFL 236
BLAST of mRNA_L-elsbetiae_contig1955.5819.1 vs. uniprot
Match: A0A6H5JWW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWW4_9PHAE) HSP 1 Score: 115 bits (288), Expect = 1.560e-26 Identity = 65/116 (56.03%), Postives = 76/116 (65.52%), Query Frame = 1 Query: 211 PLCVAATEGKPKALLALLQKGATISAQDNEGETPLRLACRAQREGIEVVVRILLRWGADETALDSDGNSVDGLLG---NVNDGRTCPPEEIERVRLLLARAPADRAWRRHGWLAML 549 PL A KA+ LL GA+++AQD +G TPL LAC Q G+E V +LLRWGADETAL++DG + LL N ND TC EIERVRLLLARAPAD+A RR WL ML Sbjct: 523 PLFSATDPRNLKAMNTLLGHGASLTAQDVDGNTPLHLACYRQDSGLEAPVDLLLRWGADETALNNDGKTPADLLDEHDNENDRTTCSEAEIERVRLLLARAPADQARRRRCWLVML 638
BLAST of mRNA_L-elsbetiae_contig1955.5819.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE) HSP 1 Score: 114 bits (284), Expect = 5.490e-26 Identity = 68/160 (42.50%), Postives = 105/160 (65.62%), Query Frame = 1 Query: 70 GADVNSRNDINCFSALHRAACNDQAESVDALVEAGADMEIKSNFETTPLCVAATEGKPKALLALLQKGATISAQDNEGETPLRL-ACRAQREGIEVVVRILLRWGADETALDSDGNSVDGLLGNVNDGRTCPPEEIERVRLLLARAPADRAWRRHGWLAM 546 G DVN++ + N +AL A+ D+A ++D L EAGA++E ++N +TPL VA+ EG+ A +ALL+ GA++ ++ +TPL L A +A G +V +LLR GADETA+ +G++ ++ + E+++RVR LLARAPADRAWRR G+L + Sbjct: 547 GGDVNAKVN-NGITALRVASAFDKAPAIDVLTEAGANIEAQANG-STPLHVASQEGRLAAGIALLRHGASVGKKNAAAQTPLHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLIL 704
BLAST of mRNA_L-elsbetiae_contig1955.5819.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE) HSP 1 Score: 111 bits (278), Expect = 2.420e-25 Identity = 72/208 (34.62%), Postives = 112/208 (53.85%), Query Frame = 1 Query: 1 GYSALDWACHRGRVSIIQALLQGGADVNSRNDINCFSALHRAACNDQAESVDALVEAGADMEIKSN---FETTPLCVAATEGKPKALLALLQKGATISAQDNEGETPLRLACRAQREGIEVVVRILLRWGADETALDSDGNSVDGLL------------GNVNDGRTCP----------PEEIERVRLLLARAPADRAWRRHGWLAML 549 G +A+D A +G V +I+A+++ G +V + D +ALH A A++VD L++AGAD+ K+ TPL V + +A++ALL++G ++ + G + L L C + G++ +V +LLRWGA ETA++ +G + +L G C +EI+R R+LLARAPADR WRR WL ML Sbjct: 243 GMTAMDVAVSKGHVGVIEAIVENGGNVRA-TDTYGLTALHHAR---GAQAVDVLLDAGADVNAKACPALHGFTPLSVCVMDNSCEAVVALLKRGGNVNDTNCGGLSALHLTCGSLSRGMDRMVDLLLRWGASETAVNKNGLTPSDILKVTTAEYHARDAGGDGSATRCVGGSATRHDSLTKEIQRARVLLARAPADRTWRRRCWLVML 446 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1955.5819.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1955.5819.1 >prot_L-elsbetiae_contig1955.5819.1 ID=prot_L-elsbetiae_contig1955.5819.1|Name=mRNA_L-elsbetiae_contig1955.5819.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=183bp GYSALDWACHRGRVSIIQALLQGGADVNSRNDINCFSALHRAACNDQAESback to top mRNA from alignment at L-elsbetiae_contig1955:21451..21999- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1955.5819.1 ID=mRNA_L-elsbetiae_contig1955.5819.1|Name=mRNA_L-elsbetiae_contig1955.5819.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=549bp|location=Sequence derived from alignment at L-elsbetiae_contig1955:21451..21999- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1955:21451..21999- >mRNA_L-elsbetiae_contig1955.5819.1 ID=mRNA_L-elsbetiae_contig1955.5819.1|Name=mRNA_L-elsbetiae_contig1955.5819.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1098bp|location=Sequence derived from alignment at L-elsbetiae_contig1955:21451..21999- (Laminarionema elsbetiae ELsaHSoW15)back to top |