mRNA_L-elsbetiae_contig19522.5807.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig19522.5807.1 vs. uniprot
Match: D8LF39_ECTSI (Putative Translation Initiation Inhibitor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF39_ECTSI) HSP 1 Score: 125 bits (313), Expect = 2.240e-34 Identity = 63/73 (86.30%), Postives = 66/73 (90.41%), Query Frame = 1 Query: 13 AAAGDLDRVRLVKITGFVHSADGFAGQSLVLNGASDLFMEVFGRENGAHARSAVGVNTLPLGVCVEIEAIVEV 231 AAAGDLD++RLVKITGFV SADGF GQS VLNGASDL +EVFGRE GAHARSAVGVN LPLGVCVEIEAI EV Sbjct: 126 AAAGDLDKIRLVKITGFVRSADGFTGQSAVLNGASDLLLEVFGREKGAHARSAVGVNALPLGVCVEIEAIAEV 198
BLAST of mRNA_L-elsbetiae_contig19522.5807.1 vs. uniprot
Match: A0A7S3M7I1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M7I1_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 2.640e-22 Identity = 50/74 (67.57%), Postives = 58/74 (78.38%), Query Frame = 1 Query: 13 AAAGDLDRVR-LVKITGFVHSADGFAGQSLVLNGASDLFMEVFGRENGAHARSAVGVNTLPLGVCVEIEAIVEV 231 +A GDLD+V+ +VKITGFV+SA F Q VLNG SDL E+FG E G HARSA+GVN LPLGV VEIEAI+EV Sbjct: 112 SAVGDLDKVKKIVKITGFVNSASDFTNQPAVLNGCSDLLGEIFGVEIGRHARSALGVNVLPLGVAVEIEAIIEV 185
BLAST of mRNA_L-elsbetiae_contig19522.5807.1 vs. uniprot
Match: A0A6H5KXY4_9PHAE (YjgF_endoribonc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXY4_9PHAE) HSP 1 Score: 93.2 bits (230), Expect = 5.150e-22 Identity = 51/75 (68.00%), Postives = 57/75 (76.00%), Query Frame = 1 Query: 22 GDLDRV-RLVKITGFVHSADGFAGQSLVLNGASDLFMEVFGRENGAHARSAVGVNTLPLGVCVEIEAIVEVGPSG 243 GDLDRV R+VK+ GFV+ DGFAGQ V+NGASDLF EVFG E G H+RSAVG N LP+ V VEIEAIVE G Sbjct: 100 GDLDRVTRIVKLVGFVNCTDGFAGQPKVVNGASDLFAEVFG-ERGVHSRSAVGTNALPMNVPVEIEAIVEFDDGG 173
BLAST of mRNA_L-elsbetiae_contig19522.5807.1 vs. uniprot
Match: A0A536EQF5_9CHLR (RidA family protein n=2 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A536EQF5_9CHLR) HSP 1 Score: 91.3 bits (225), Expect = 1.300e-21 Identity = 47/74 (63.51%), Postives = 58/74 (78.38%), Query Frame = 1 Query: 13 AAAGDLDRVR-LVKITGFVHSADGFAGQSLVLNGASDLFMEVFGRENGAHARSAVGVNTLPLGVCVEIEAIVEV 231 AA G LDRVR +VK+TGFV SA+ F QS V+NGASDL ++VFG E G HAR+AVGV LPLG VE+EA++E+ Sbjct: 78 AALGSLDRVRGVVKLTGFVSSAESFTDQSAVVNGASDLVVDVFGAERGTHARAAVGVAQLPLGAAVELEAVLEI 151
BLAST of mRNA_L-elsbetiae_contig19522.5807.1 vs. uniprot
Match: A0A7S3U393_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3U393_9SPIT) HSP 1 Score: 90.1 bits (222), Expect = 2.070e-21 Identity = 48/75 (64.00%), Postives = 56/75 (74.67%), Query Frame = 1 Query: 22 GDLDR-VRLVKITGFVHSADGFAGQSLVLNGASDLFMEVFGRENGAHARSAVGVNTLPLGVCVEIEAIVEVGPSG 243 GDLDR VR+VKI GFV+ AD F Q V+NG S+L ++FG+E GAHARSAVG N+LP V VEIE I EV PSG Sbjct: 55 GDLDRIVRIVKIVGFVNCADDFTQQPEVINGCSNLLGDIFGQERGAHARSAVGTNSLPRNVPVEIEMIAEVAPSG 129
BLAST of mRNA_L-elsbetiae_contig19522.5807.1 vs. uniprot
Match: A0A2W6ACU6_9BACT (YjgF_endoribonc domain-containing protein n=1 Tax=Candidatus Dormibacter sp. RRmetagenome_bin12 TaxID=2599630 RepID=A0A2W6ACU6_9BACT) HSP 1 Score: 90.5 bits (223), Expect = 2.470e-21 Identity = 50/74 (67.57%), Postives = 58/74 (78.38%), Query Frame = 1 Query: 13 AAAGDLDRVR-LVKITGFVHSADGFAGQSLVLNGASDLFMEVFGRENGAHARSAVGVNTLPLGVCVEIEAIVEV 231 AA G +DRV +V++TGFV SA GFAGQ V+NGASDLF+E+FG E G HARSAVGV LPLG +EIEAI EV Sbjct: 77 AALGSVDRVGGVVRVTGFVRSAPGFAGQPAVINGASDLFVELFG-ERGRHARSAVGVGELPLGAALEIEAIFEV 149
BLAST of mRNA_L-elsbetiae_contig19522.5807.1 vs. uniprot
Match: A0A2R5GI79_9STRA (Protein TCP17 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GI79_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 2.700e-21 Identity = 50/74 (67.57%), Postives = 58/74 (78.38%), Query Frame = 1 Query: 13 AAAGDLDRV-RLVKITGFVHSADGFAGQSLVLNGASDLFMEVFGRENGAHARSAVGVNTLPLGVCVEIEAIVEV 231 A GDLDRV R+VK+ GFV+ ADGFA Q V+NGASDLF EV G E G HARSAVG N+LPL + VE+EAIVE+ Sbjct: 109 AELGDLDRVARVVKVVGFVNCADGFAQQPQVINGASDLFAEVLG-ERGLHARSAVGTNSLPLNIPVEVEAIVEI 181
BLAST of mRNA_L-elsbetiae_contig19522.5807.1 vs. uniprot
Match: A0A1M7RRP4_9RHOB (Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family n=1 Tax=Oceanicella actignis TaxID=1189325 RepID=A0A1M7RRP4_9RHOB) HSP 1 Score: 90.5 bits (223), Expect = 2.730e-21 Identity = 46/76 (60.53%), Postives = 59/76 (77.63%), Query Frame = 1 Query: 7 QTAAAGDLDRV-RLVKITGFVHSADGFAGQSLVLNGASDLFMEVFGRENGAHARSAVGVNTLPLGVCVEIEAIVEV 231 +TA GDLDRV R+VK+TG+V++A F +V+NGASDL EVFG E GAHAR+AVGV +LPLGV VE+E + E+ Sbjct: 79 KTACGGDLDRVTRVVKLTGYVNAAPDFENHPIVMNGASDLMAEVFGPEIGAHARAAVGVPSLPLGVAVEVEGVFEI 154
BLAST of mRNA_L-elsbetiae_contig19522.5807.1 vs. uniprot
Match: A0A8K1C318_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C318_PYTOL) HSP 1 Score: 90.5 bits (223), Expect = 3.180e-21 Identity = 47/74 (63.51%), Postives = 57/74 (77.03%), Query Frame = 1 Query: 22 GDLDRV-RLVKITGFVHSADGFAGQSLVLNGASDLFMEVFGRENGAHARSAVGVNTLPLGVCVEIEAIVEVGPS 240 G+LD + R+VK+TGFV+ DGF Q V+NGASDL +++FG + G HARSAVG N LPL V VEIEAIVEV PS Sbjct: 82 GNLDHIKRIVKLTGFVNCVDGFTAQPAVINGASDLLVQIFG-DKGKHARSAVGTNALPLNVAVEIEAIVEVDPS 154
BLAST of mRNA_L-elsbetiae_contig19522.5807.1 vs. uniprot
Match: A0A812XST0_SYMMI (TCP17 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XST0_SYMMI) HSP 1 Score: 89.4 bits (220), Expect = 3.950e-21 Identity = 47/74 (63.51%), Postives = 54/74 (72.97%), Query Frame = 1 Query: 13 AAAGDLDRV-RLVKITGFVHSADGFAGQSLVLNGASDLFMEVFGRENGAHARSAVGVNTLPLGVCVEIEAIVEV 231 +A GDLD+V R+VK+ GFV F Q V+NG SDL +EVFG E G HARSAVG N LPLGV VEIEAI+EV Sbjct: 55 SAVGDLDKVKRIVKLVGFVQCEGDFTQQPAVVNGCSDLMVEVFGMEKGRHARSAVGTNALPLGVAVEIEAIIEV 128 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19522.5807.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig19522.5807.1 >prot_L-elsbetiae_contig19522.5807.1 ID=prot_L-elsbetiae_contig19522.5807.1|Name=mRNA_L-elsbetiae_contig19522.5807.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=82bp MQQTAAAGDLDRVRLVKITGFVHSADGFAGQSLVLNGASDLFMEVFGRENback to top mRNA from alignment at L-elsbetiae_contig19522:2357..2602+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig19522.5807.1 ID=mRNA_L-elsbetiae_contig19522.5807.1|Name=mRNA_L-elsbetiae_contig19522.5807.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=246bp|location=Sequence derived from alignment at L-elsbetiae_contig19522:2357..2602+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig19522:2357..2602+ >mRNA_L-elsbetiae_contig19522.5807.1 ID=mRNA_L-elsbetiae_contig19522.5807.1|Name=mRNA_L-elsbetiae_contig19522.5807.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=492bp|location=Sequence derived from alignment at L-elsbetiae_contig19522:2357..2602+ (Laminarionema elsbetiae ELsaHSoW15)back to top |