mRNA_L-elsbetiae_contig1951.5802.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1951.5802.1 vs. uniprot
Match: D8LKZ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKZ1_ECTSI) HSP 1 Score: 798 bits (2060), Expect = 2.060e-285 Identity = 411/546 (75.27%), Postives = 444/546 (81.32%), Query Frame = 1 Query: 1 QTFGRGDVVEVKGLAVAVPEGVVVELKQPQGGFVFQRHGSRTLLEEVEALKVEEGDWWYRVLHPAGARFVKIPSLLPKAPRHSSPVPQSSVVHACRRHTPPGSSVAFVELSGNKGWIVESAKERAVLEKSVDGQFIVENITGEYRDDSEAWYEVVAESGVELLAAPDTNGGRMKELFLPGKSFCASERFQPPGQASTYLKVKGREAWVVQQLEGDGEEACRKLPPPMDEAVEQWYRVQYPGGVRLRASPAFEHTDPSLGVLVCGWVFLATKRYRAPGSSCMLLQVATPEGVVRDSSDGDDGNSIDA-SSSXXXXXGDGLDTPEQARRAAQRHCGWVPSTSNGVEVVTETMEPWIERGLFAYQVVVDETLSARTGPHEKAPGILQQLPPYSVAAAATFLETGDGLEGFVQLAGTGSWVSSRRGQKNSMIRLPAFPSVDKTKRRFVVSAPEGVETVVGPSYLAPPTGQLLPSGTEGSSEMVWSLEGWPGDRGAGDRKFVLLEGMGWVQLDAGREDL---LQEVHTPP--LRPSPSGGXXXXXXXEDQE 1620 ++FG GDVVEV+GLAVAVPEGVVVELKQPQ GFVFQ+HG RTLLEEVEALKVEEGDWWYRV+HPAGARF KIPSLLP+ PRH+ VPQ++VVHACRRHTPPGSSV FVELS NKGWIVES KE+AVLE+S DG+++VENITG YRDDSEAWY+VV ESGVELL APD RM ELFLPGK+FC SERFQPP Q ST+LKVKGREAWVVQ+ E DGEEAC+KLPPPMDEAVEQWYRVQYPGGVRLRASPAFEHTDPSLGVLVCGWVFLAT+RYRAPGSS MLLQVATPEGVVRDSS + G ++D SS D D EQARR A+RHCGWVPSTSNG EVV VDETL A TGPH APG QQLPPYSVAAAATFLETGDGLEGFVQLAGTGSWV SRRGQ M+RLPAFP VDKT RRFVVSAP GVETVVGPS AP TGQLLP G EGSSEMVWS++GWPGDRG GDR+FVLLEGMGWVQLDAG E L+E+ PP +PSP G E ++ Sbjct: 78 KSFGFGDVVEVRGLAVAVPEGVVVELKQPQSGFVFQKHGDRTLLEEVEALKVEEGDWWYRVVHPAGARFAKIPSLLPQTPRHTIAVPQNTVVHACRRHTPPGSSVTFVELSDNKGWIVESTKEKAVLEQSSDGKYMVENITGHYRDDSEAWYQVVDESGVELLEAPDAGSTRMLELFLPGKAFCVSERFQPPEQGSTFLKVKGREAWVVQRAESDGEEACKKLPPPMDEAVEQWYRVQYPGGVRLRASPAFEHTDPSLGVLVCGWVFLATRRYRAPGSSHMLLQVATPEGVVRDSSS-EYGETVDVYGSSSDDSDWDNEDELEQARRGARRHCGWVPSTSNGEEVV------------------VDETLLANTGPHVNAPGSPQQLPPYSVAAAATFLETGDGLEGFVQLAGTGSWVLSRRGQDTKMVRLPAFPRVDKTPRRFVVSAPGGVETVVGPSPSAPRTGQLLPLGAEGSSEMVWSVKGWPGDRGVGDRRFVLLEGMGWVQLDAGTEQEGGPLREIGAPPPXXQPSPFDGTREGAVDEQRQ 604 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1951.5802.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1951.5802.1 >prot_L-elsbetiae_contig1951.5802.1 ID=prot_L-elsbetiae_contig1951.5802.1|Name=mRNA_L-elsbetiae_contig1951.5802.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=372bp MKELFLPGKSFCASERFQPPGQASTYLKVKGREAWVVQQLEGDGEEACRKback to top mRNA from alignment at L-elsbetiae_contig1951:3741..10346+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1951.5802.1 ID=mRNA_L-elsbetiae_contig1951.5802.1|Name=mRNA_L-elsbetiae_contig1951.5802.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6606bp|location=Sequence derived from alignment at L-elsbetiae_contig1951:3741..10346+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1951:3741..10346+ >mRNA_L-elsbetiae_contig1951.5802.1 ID=mRNA_L-elsbetiae_contig1951.5802.1|Name=mRNA_L-elsbetiae_contig1951.5802.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2232bp|location=Sequence derived from alignment at L-elsbetiae_contig1951:3741..10346+ (Laminarionema elsbetiae ELsaHSoW15)back to top |