mRNA_L-elsbetiae_contig1950.5800.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1950.5800.1
Unique NamemRNA_L-elsbetiae_contig1950.5800.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1950.5800.1 vs. uniprot
Match: A0A6H5JWC3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JWC3_9PHAE)

HSP 1 Score: 715 bits (1845), Expect = 8.700e-257
Identity = 355/431 (82.37%), Postives = 395/431 (91.65%), Query Frame = 1 
Query:    1 GVTPRCDQYLELWPPGFETYNVMVPNLFDIPFCDFGVGTLTPDLRSIPAYVSSRTYGCAYCSSHTAVMGTVWKGSGLTLEKNALAMAPQPDPKVFSRKELAAINIAKKVGAVPSMVTTADIELLASCMTVEEQEAVVNACTVMGFLNRFMDASGMTLEMSAIETSLAKLAPSGWTPSIAYDPEADEELMKEDKLEASKRERRKEGTGFFGYVKMIIGSKMADSRAMKKIPSSDAGLFRQCQTEGGFVPYYIRKMRHGPAKKALSFGFLLRLCQGSDEVPVKLKQLMCYQCATNAENSVLRAHFAFMAMRSGVSLERLKQVTDVTSSGGGDSAAEVAAIAFAQAASWTPTRMSATLAGLIARLYSPPAVIELLITVSVEFAIHRWTSVYVPRKYEPEIAQFVKEHGVALGIPKRPCTPEQKKWGSIAAQRRK 1293
            GVTPRCDQYLELWPPGFETYNVMVPNLFDIPFCDFGVGTLTPDLRSIPAYVSSRTYGCAYC+SHTAVMGTVWKGSGLTL+KNA+AM  +P+P VFS KELAAINIAKKVGAVPS VTTADIE+LA+  T +EQEAVVNACT+MGFLNRFMDASGMTLEM AIETSL KLAPSGW P+ AYD +AD ELMKED+ EA KRE+RK+ +GFFG+VKMI G KMAD+R++KKIP+SD+ LF QC+ +GGFVPYYIR+M+H  AKKALSFGFLLRLCQGSDEVPV+LKQLM YQCATNAEN+VLRAHFAFMAMRSGV+L RL QVTD+TS+GGGDSAAE AA+AFAQAASWTPTRM+A LAGLI+RL+SPPAVIELLITVSVEFAIHRWTSVYVPR+YEPEI +FVKE+G ALGIP  PCT +Q+KW  IAAQ+RK
Sbjct:   66 GVTPRCDQYLELWPPGFETYNVMVPNLFDIPFCDFGVGTLTPDLRSIPAYVSSRTYGCAYCASHTAVMGTVWKGSGLTLDKNAMAMDEEPNPDVFSPKELAAINIAKKVGAVPSTVTTADIEMLATTFTRKEQEAVVNACTIMGFLNRFMDASGMTLEMEAIETSLQKLAPSGWVPNDAYDKDADVELMKEDREEAVKREKRKKSSGFFGFVKMIFGGKMADNRSLKKIPTSDSALFSQCKKDGGFVPYYIRQMQHANAKKALSFGFLLRLCQGSDEVPVQLKQLMAYQCATNAENNVLRAHFAFMAMRSGVTLSRLIQVTDITSTGGGDSAAEDAAMAFAQAASWTPTRMTAALAGLISRLFSPPAVIELLITVSVEFAIHRWTSVYVPRRYEPEIDEFVKEYGPALGIPHSPCTADQQKWEEIAAQKRK 496
[Close]
BLAST of mRNA_L-elsbetiae_contig1950.5800.1 vs. uniprot
Match: D7FMN7_ECTSI (Probable fusion protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMN7_ECTSI)

HSP 1 Score: 452 bits (1162), Expect = 3.800e-154
Identity = 226/416 (54.33%), Postives = 302/416 (72.60%), Query Frame = 1 
Query:   61 NVMVPNLFDIPFCDFGVGTLTPDLRSIPAYVSSRTYGCAYCSSHTAVMGTVWKGSGLTLEKNALAMAPQPDPKVFSRKELAAINIAKKVGAVPSMVTTADIELLASCMTVEEQEAVVNACTVMGFLNRFMDASGMTLEMSAIETSLAKLAPSGWTPSIAYDPEADEELMKEDKLEASKRERRKEGTGFFGYVKMIIGSKMADSRAMKKIPSSDAGLFRQCQTEGGFVPYYIRKMRHGPAKKALSFGFLLRLCQGSDEVPVKLKQLMCYQCATNAENSVLRAHFAFMAMRSGVSLERLKQVTDVTSS---GGGDS--AAEVAAIAFAQAASWTPTRMSATLAGLIARLYSPPAVIELLITVSVEFAIHRWTSVYVPRKYEPEIAQFVKEHGVALGI-PKRPCTPEQKKWGSIAAQRR 1290
            +V+VPNL++IPFCDFG+GT+   LR + AYV SR YGC YC++H A +GT+W+G  + L KN  AMAP+PDP+VF+ KEL+AINI+KK+G VPS VT  DI  +AS  T +EQE V+N+  VMGFLNRFMD  GMTLEM  +E  + +LAP+GW    +YDPEAD ELM ED++EA KR  RK  + F  Y+KMIIG+K+AD  ++K  P+++  + ++C    GFVPYY+ +M+H  A+ A  + F LRLCQGS+EVP +LKQLMCY CATNA N++LRAH+AFMA R+G+ + +L   T+  SS      D+  A +VAA+A A+A S TP+ +S  L GL+ R YSP  VIEL+ TVS+ F  HRWT++Y+PR+YEPE+ +FV+EHG ALGI P+RPCT +Q  W  IA + R
Sbjct:    2 SVLVPNLWNIPFCDFGIGTIDGGLRGLVAYVISREYGCGYCAAHCAALGTIWRGDSVFLAKNIKAMAPEPDPEVFTPKELSAINISKKLGPVPSRVTADDIRDMASVYTEKEQEGVINSGVVMGFLNRFMDTIGMTLEMEPLEMGMEQLAPTGWEHGHSYDPEADAELMAEDRVEAVKRAERKSKSNFLSYIKMIIGAKLADRASLKNTPTAEQLVAQKCMELAGFVPYYLVQMKHSQARNAFVWAFTLRLCQGSEEVPAQLKQLMCYICATNAGNTILRAHYAFMAHRNGMPIRQLATATNTDSSEAVAADDTIDAKQVAAMALAEACSGTPSTVSPVLVGLLMRQYSPAGVIELIATVSLAFMYHRWTAIYMPREYEPEVLKFVQEHGAALGIDPERPCTKDQSTWEGIAKEAR 417
[Close]
BLAST of mRNA_L-elsbetiae_contig1950.5800.1 vs. uniprot
Match: A0A6H5JXG8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXG8_9PHAE)

HSP 1 Score: 301 bits (771), Expect = 1.970e-95
Identity = 172/379 (45.38%), Postives = 241/379 (63.59%), Query Frame = 1 
Query:  109 VGTLTPDLRSIPAYVS-SRTYGCAYCSSHTAVMGTVWKGSGLTLEKNALAMAPQPDPKVFSRKELAAINIAKKVGAVPSMVTTADIELLASCMTVEEQEAVVNACTVMGFLNRFM------------DAS-----GMTLEMSAIETSLAKLAPSGWTPSIAYDPEADEELMKEDKLEASKRE-RRKEGTGFFGYVKMIIGSKMADSRAMKKIPSSDAGLFRQCQTEGGFVPYYI---RKMRHGPAKKALSFGFLLRLCQGSDEVPVKLKQLMCYQCATNAENSVLRAHFAFMAMRSGVSLERLKQVT-DVTSSGGGDSAAEVAAIAFAQAASWTPTRMSATLAGLIARLYSPPAVIELLITVSVEFAIHRWTSVYVPRK 1176
            + T  P  +S P  +  S ++GC+YCS+H A +GT+ +G  + L KNA AM P P P VF+ KELA INI KK+GAVP+ VT+ DI+ +A  +T EEQE V+NA  +MGFLNRFM            D S     GMTLE+  +ET    LA SGWT  I++DPE DEELM+ED+  A +RE R+K+  G F ++KM++G+KMADS ++K  P+S+  + + C    GF PYY+    K +   A+ AL + F  RLCQGS+EVP   KQ M Y  AT+A+N++LRAHFAFMA R+GVS+  L   T +   + GG+   + AA++ A+A   TP  +   L  L+ R Y+P  VIEL+ T+S+   + RWTS+Y+P++
Sbjct:   21 IHTRPPRSQSSPQGIFLSSSFGCSYCSAHCAGLGTIRQGHDVFLTKNAQAMMPVPGPGVFNPKELAVINIGKKLGAVPNEVTSDDIQSMARALTSEEQECVINAMVLMGFLNRFMLMMTNDCFCSRMDESPRGTFGMTLELEPLETGNKHLAESGWTAGISFDPEGDEELMEEDRAMAERREERKKQACGGFTFLKMLVGAKMADSASLKGTPTSEKNVKQLCTERAGFAPYYLVGEEKSKMANARNALVWAFTRRLCQGSEEVPAATKQTMGYMLATSADNTILRAHFAFMAHRNGVSVSNLASATAEGGDTDGGEDLKKAAALSMARACGGTPGPLPRELVALLMRQYTPAGVIELVNTLSLVSMLQRWTSIYMPKQ 399
[Close]
BLAST of mRNA_L-elsbetiae_contig1950.5800.1 vs. uniprot
Match: A0A850G4F7_9DELT (Uncharacterized protein n=1 Tax=Pseudenhygromyxa sp. WMMC2535 TaxID=2712867 RepID=A0A850G4F7_9DELT)

HSP 1 Score: 269 bits (688), Expect = 3.270e-82
Identity = 157/430 (36.51%), Postives = 237/430 (55.12%), Query Frame = 1 
Query:    1 GVTPRCDQYLELWPPGFETYNVMVPNLFDIPFCDFGVGTLTPDLRSIPAYVSSRTYGCAYCSSHTAVMGTVWKGSGLTLEKNALAMAPQPDPKVFSRKELAAINIAKKVGAVPSMVTTADIELLASCMTVEEQEAVVNACTVMGFLNRFMDASGMTLEMSAIETSLAKLAPSGWTPSIAYDPEADEELMKEDKLEASKRERRKEGTGFFGYVKMIIGSKMADSRAMKKIPSSDAGLFRQCQTEGGFVPYYIRKMRHGPAKKALSFGFLLRLCQGSDEVPVKLKQLMCYQCATNAENSVLRAHFAFMAMRSGVSLERLKQVTDVTSSGGGDSAAEVAAIAFAQAASWTPTRMSATLAGLIARLYSPPAVIELLITVSVEFAIHRWTSVYVPRKYEPEIAQFVKEHGVALGIPKRPCTPEQKKWGSIAAQRR 1290
            GV P    Y E+WPP   TY+V+VP + DIP CD G G + P LRS+  YV+SR++GC+YC++H+A +GTV++GSG  L +NA AM+P+   K+FS  +LAAI+ A     +P+ +  +    LA   + + +EA+  A T+MGFLN  MD  GM LE   ++ +   LA S WTP   +DP  D+ +++ DKL    +       G     + + G    D  A++ I    A +  Q +   GFVPYY+ ++   PAK+  +   + R+   + E+PV LK   C+  A N++N +L AHFA  AMR+G S+E+L+       +GG     E  A A A+ AS  P  +   L   +   +SPP +IEL+  +S++    R+ S Y    YE  +A FV EHG  LG+P+RP     + W  +  + R
Sbjct:   40 GVVPHAMSYFEIWPPALTTYSVLVPAMLDIPRCDMGRG-IPPALRSLVLYVASRSHGCSYCAAHSASVGTVFRGSGGNLARNAQAMSPEAC-KLFSPADLAAIDYATAAAKLPNELEESHRLGLARHFSEDHEEAIALAVTLMGFLNCAMDTLGMVLEWGVLDRAQRHLAASDWTPGQNFDPRFDQSVVEADKLTDDGQT-----LGPLELARTMAGIIAYDRGALETIAKRPAKVHEQVREAMGFVPYYVERVERTPAKRVFAHMLVERVQSSAGELPVWLKHAACFAAARNSKNDLLAAHFAHWAMRAGASIEQLRGALMPRPTGG----REATAFALAKVASSQPATLGHELLERVTSQFSPPEIIELVTMLSIQGMFQRYVSTYPVDSYESPVADFVTEHGTLLGLPRRPSQVSAR-WDELCQRAR 457
[Close]
BLAST of mRNA_L-elsbetiae_contig1950.5800.1 vs. uniprot
Match: A0A0C2CZ51_9DELT (Putative fusion protein n=2 Tax=Enhygromyxa salina TaxID=215803 RepID=A0A0C2CZ51_9DELT)

HSP 1 Score: 266 bits (679), Expect = 8.460e-81
Identity = 152/416 (36.54%), Postives = 231/416 (55.53%), Query Frame = 1 
Query:    1 GVTPRCDQYLELWPPGFETYNVMVPNLFDIPFCDFGVGTLTPDLRSIPAYVSSRTYGCAYCSSHTAVMGTVWKGSGLTLEKNALAMAPQPDPKVFSRKELAAINIAKKVGAVPSMVTTADIELLASCMTVEEQEAVVNACTVMGFLNRFMDASGMTLEMSAIETSLAKLAPSGWTPSIAYDPEADEELMKEDKLEASKRERRKEGTGFFGYVKMIIGSKMADSRAMKKIPSSDAGLFRQCQTEGGFVPYYIRKMRHGPAKKALSFGFLLRLCQGSDEVPVKLKQLMCYQCATNAENSVLRAHFAFMAMRSGVSLERLKQVTDVTSSGGGDSAAEVAAIAFAQAASWTPTRMSATLAGLIARLYSPPAVIELLITVSVEFAIHRWTSVYVPRKYEPEIAQFVKEHGVALGIPKRPCT 1248
            GV P    Y E+WPP F TY+V+VP+L DIP CD G G ++PDLRS+  Y++SR+YGC+YCS+H+A +GTV++G G +LE+N  A+  +    +F   ++AAIN A  V  +PS VT      LA   +   +EA+V A T+MGFLN  MD+ GM LE   +E +   L PS W P   YD   D ++     +EA K     E  G     + + G    D  A+  I      ++ Q +   GF+P+Y+ ++     ++  +   + RL   +  VPV LK  +C+  A  ++N +L AHFAF+A+R+G + +RL          G D   + AA AFA  A+ +P  ++      +   ++P  +IE+++ +SV   ++R+TS Y    YEPEIA FV +HG  LG+  +P T
Sbjct:   46 GVVPHAMSYFEIWPPAFTTYSVLVPSLLDIPRCDLGRG-ISPDLRSLVLYIASRSYGCSYCSAHSAGVGTVFRGPGGSLERNKQALDAK-SCDLFGAADIAAINYATAVAKIPSEVTLEHRLDLARYYSETHEEAIVLAATLMGFLNCAMDSLGMVLEWRILEIAQQYLTPSDWQPGQNYDEAFDRDI-----IEADKETDDGEKLGPLALARTMAGIIAYDRGALAGIAGRPGKIYEQLRASLGFLPHYVERIERVSTQRVFTHCLVERLQSDAGSVPVWLKHALCFVAAKKSKNPLLAAHFAFLAIRAGATAKRLASALTP----GDDEGRDAAAFAFAHVAAISPAAVTRKEIAGLTSFFTPAGIIEIVVALSVHGMLNRYTSTYPVDNYEPEIAAFVAQHGAVLGLEAQPYT 450
[Close]
BLAST of mRNA_L-elsbetiae_contig1950.5800.1 vs. uniprot
Match: A0A2S9YSM1_9DELT (Uncharacterized protein n=1 Tax=Enhygromyxa salina TaxID=215803 RepID=A0A2S9YSM1_9DELT)

HSP 1 Score: 251 bits (641), Expect = 3.780e-75
Identity = 160/414 (38.65%), Postives = 228/414 (55.07%), Query Frame = 1 
Query:    1 GVTPRCDQYLELWPPGFETYNVMVPNLFDIPFCDFGVGTLTPDLRSIPAYVSSRTYGCAYCSSHTAVMGTVWKGSGLTLEKNALAMAPQPDPKVFSRKELAAINIAKKVGAVPSMVTTADIELLASCMTVEEQEAVVNACTVMGFLNRFMDASGMTLEMSAIETSLAKLAPSGWTPSIAYDPEADEELMKEDKLEASKRERRKEGTGFFGYVKMIIGSKMADSRAMKKIPSSDAGLFRQCQTEGGFVPYYIRKMRHGPAKKALSFGFLLRLCQGSDEVPVKLKQLMCYQCATNAENSVLRAHFAFMAMRSGVSLERLKQVTDVTSSGGGDSAAEVAAIAFAQAASWTPTRMSATLAGLIARLYSPPAVIELLITVSVEFAIHRWTSVYVPRKYEPEIAQFVKEHGVALGIPKRP 1242
            GV P    Y E+WPP F TY+V+VP+L DIP CD G G ++PDLRS+  YV+SR+Y CAYCS+H A MGT++KG G +L +NA AMAP    K F   +LAAI+ A  V  +P+ VT      LA   +  ++E+VV A T+MGFLN  +D  G+ LE   +  S A LA S WTPS  YD   D E+++ D  E    E           +  +IG   A    ++K P     ++ Q +   GFVP Y+ ++   PAK+ L+   + RL        + LK  M +  A  + N +L AH+A+ AMRSG ++  L+   + + +       E AA A A+A S  P  +       + R +SP  +IEL++T++    +HR+TS Y    YEP IA FV+ HG ALG+  +P
Sbjct:   47 GVVPHAMGYFEIWPPAFTTYSVLVPSLLDIPRCDLGRG-ISPDLRSLVVYVASRSYDCAYCSAHAAGMGTIFKGPGGSLLRNAEAMAPLDSSK-FEPSDLAAIDYATAVAQMPTEVTLDHRLALARHFSERDEESVVLAATLMGFLNCAVDTLGVVLEQRLLTQSQAHLAASAWTPSKNYDERYDREVVEAD-AETDDGETLNP-LELAQTIAGVIGYSRASLSTIEKRPDK---IYAQVEAALGFVPSYLLRISRTPAKRVLAHLLIERLHTMQGPTGMWLKYAMGFVAAKASHNELLAAHYAYGAMRSGANVGMLRDALEPSQA----ETREAAAFALARAISSPPVELRNDQILSLMRGHSPVGIIELIVTLATYTLLHRYTSTYPAVSYEPPIAAFVEAHGEALGLAAQP 449
[Close]
BLAST of mRNA_L-elsbetiae_contig1950.5800.1 vs. uniprot
Match: A0A0C2D7D5_9DELT (Uncharacterized protein n=1 Tax=Enhygromyxa salina TaxID=215803 RepID=A0A0C2D7D5_9DELT)

HSP 1 Score: 243 bits (621), Expect = 3.500e-72
Identity = 162/429 (37.76%), Postives = 228/429 (53.15%), Query Frame = 1 
Query:    1 GVTPRCDQYLELWPPGFETYNVMVPNLFDIPFCDFGVGTLTPDLRSIPAYVSSRTYGCAYCSSHTAVMGTVWKGSGLTLEKNALAMAPQPDPKVFSRKELAAINIAKKVGAVPSMVTTADIELLASCMTVEEQEAVVNACTVMGFLNRFMDASGMTLEMSAIETSLAKLAPSGWTPSIAYDPEADEELMKEDKLEASKRERRKEGTGFFGYVKMIIGSKMADSRAMKKIPSSDAGLFRQCQTEGGFVPYYIRKMRHGPAKKALSFGFLLRLCQGSDEVPVKLKQLMCYQCATNAENSVLRAHFAFMAMRSGVSLERLKQVTDVTSSGGGDSAAEVAAIAFAQAASWTPTRMSAT-LAGLIARLYSPPAVIELLITVSVEFAIHRWTSVYVPRKYEPEIAQFVKEHGVALGIPKRPCTPEQKKWGSIAAQ 1284
            GV P    YLE+WPP F TY+V+VP+L DIP CD G G ++PDLRS+  YV+SR+Y CAYCS+H A MGT++KG G +L +NA AMAP  D   FS  +LAAI  A     +PS ++      LA+  +  ++E++V A T+MGFLN  MD  G+ LE   +  S A LA S WTP+  YD   D EL+     EA  +    +  G     + I G       ++  I      ++ Q +   GFVP YI  +    AK+  +   + RL        + LK  M +  A    N +L AHFAF AMRSG ++  L      +         E AA A A++ +  P  +S   +AGL+ R +SP  +IEL++T++    +HR+TS Y    +EP IA FV +HG  LG+ + P  P    W    A+
Sbjct:   47 GVVPHAMSYLEIWPPAFTTYSVLVPSLLDIPRCDLGRG-ISPDLRSLVVYVASRSYDCAYCSAHAAGMGTIFKGPGGSLLRNAEAMAPL-DSSNFSLADLAAIEYATAAARMPSELSLEHRVGLATHFSERDEESIVLAATLMGFLNCAMDTLGVVLEQRLLTQSQAHLAASAWTPNKNYDERYDRELV-----EADAQTDDGDTLGPIELAQTIAGVINYSRTSLSSIEKRADKIYAQVEAALGFVPSYILNVDRIAAKRVFAHVLIERLHTMQGPTAMWLKYAMGFVAARACNNQLLAAHFAFGAMRSGANVGMLLDALAPSQ----PETREAAAFALARSIAKPPVELSNDQIAGLM-RGHSPVGIIELIVTLATFTMLHRYTSTYPVSTHEPPIAAFVAQHGELLGLVQTPH-PNAASWDQQVAK 462
[Close]
BLAST of mRNA_L-elsbetiae_contig1950.5800.1 vs. uniprot
Match: A6G658_9DELT (Probable fusion protein n=1 Tax=Plesiocystis pacifica SIR-1 TaxID=391625 RepID=A6G658_9DELT)

HSP 1 Score: 238 bits (607), Expect = 1.440e-70
Identity = 150/430 (34.88%), Postives = 233/430 (54.19%), Query Frame = 1 
Query:    1 GVTPRCDQYLELWPPGFETYNVMVPNLFDIPFCDFGVGTLTPDLRSIPAYVSSRTYGCAYCSSHTAVMGTVWKGSGLTLEKNALAMAPQPDPKVFSRKELAAINIAKKVGAVPSMVTTADIELLASCMTVEEQEAVVNACTVMGFLNRFMDASGMTLEMSAIETSLAKLAPSGWTPSIAYDPEADEELMKEDKLEASKRERRKEGTGFFGYVKMIIGSKMADSRAMKKIPSSDAGLFRQCQTEGGFVPYYIRKMRHGPAKKALSFGFLLRLCQGSDEVPVKLKQLMCYQCATNAENSVLRAHFAFMAMRSGVSLERLKQVTDVTSSGGGDSAAEVAAIAFAQAASWTPTRMSATLAGLIARLYSPPAVIELLITVSVEFAIHRWTSVYVPRKYEPEIAQFVKEHGVALGIPKRPCTPEQKKWGSIAAQRR 1290
            GV PR   Y E+WPP F TY+V+VP   DIP CD G G ++PDLRS+ AYVSSR++GC YCS+H A +GT+++G+G +LE+N  AM PQ    +FS  + AAI+ A  +  VP+ +       +A   + + +E++V + T+MGFLN  +D  GM LE   +  +   L+ SGW     Y+ E D EL++ D  E +K        G  G  + ++G    D +A+  I    A L  Q   E GFVP YIR+    P K+  +   + R+C  +  V  + K +M +  A   ++ +L A FA +A+R+G   + L+    + +    D  AE A  A A+A++  P  +   L   +   Y+P  ++EL++ VSV   + R+++ Y   +YE  +A FV EHG  +G+  +P    +  W  IA + R
Sbjct:    7 GVVPRVMSYFEIWPPAFTTYSVLVPAFMDIPRCDLGRG-ISPDLRSLVAYVSSRSFGCGYCSAHAAGIGTMFRGAGGSLERNREAMNPQAC-NLFSPADQAAIDFANAIAEVPTGIREEHRIAIAKHYSEDHEESIVLSATLMGFLNCCIDVLGMVLERRMLHQAEQYLSGSGWEAGNKYEEEYDRELVEADPDEDTK-------LGPLGMARSMVGLIAFDRKALANIEGRPAKLEAQLHKELGFVPSYIRRTSRVPVKRVWAHMLIERICGTNGSVDPRHKLIMSFVAAKLFDDRLLAAQFAHLAVRAGADPKELRAA--LITGRCEDPRAE-AGYALARASTRAPVTLQLQLIEALMEHYTPAEIMELVVVVSVISMLRRYSAFYPEDRYEDAVANFVAEHGQHIGLSTKPGQTGRS-WDEIAFKHR 423
[Close]
BLAST of mRNA_L-elsbetiae_contig1950.5800.1 vs. uniprot
Match: A0A7S1TD96_9RHOD (Hypothetical protein n=2 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TD96_9RHOD)

HSP 1 Score: 180 bits (456), Expect = 1.630e-47
Identity = 140/430 (32.56%), Postives = 213/430 (49.53%), Query Frame = 1 
Query:    1 GVTPRCDQYLELWPPGFETYNVMVPNLFDIPFCDFGVGTLTPDLRSIPAYVSSRTYGCAYCSSHTAVMGTVWKGSGLTLEKNALAMAPQPDPKVFSRKELAAINIAKKVGAVPSMVTTADIELLASCMTVEEQEAVVNACTVMGFLNRFMDASGMTLEMSAIETSLAKLAPSG-------WTPSIAYDPEADEELMKE--DKLEASKRERRKEGTG----FFGYVKMIIGSKMADSRAMKKIPSSDAGLFRQCQTEGGFVPYYIRKMRHGPAKKALSFGFLLRL-CQGSDEVPVKLKQLMCYQCATNAENSVLRAHFAFMAMRSGVSLERLKQVTDVTSSGGGD----SAAEVAAIAFAQAASWTPTRMSATLAGLIARLYSPPAVIELLITVSVEFAIHRW-TSVYVPRKYEPEIAQFVKE-HGVALGI 1230
            GV PR   ++ + PP  +  ++++PNL ++PF DFG+G L P+LRSI  + +++++GC  CS H    GTV KGS L +EK   A   +      S +E+AA   ++ +G VP+ VT  D   LA   +   +E V+   +VM  + RF D  G+ LE+  +  +   L P         W P     P   + L +E    LEA   ER+KEG       FG   M+  S + D +A   IP     L    + E GF PYY+ ++R    ++A++   +  L  + S ++PV+LK   CY  A    + +LRAHF ++A+ SG+    L  V     SG  D    S  E  A    + +  +P  +  +LA  +A  + P A++E LITV+  F +  W  S   P +YEPEIA F    HG  L +
Sbjct:   70 GVQPRLSCWMAIHPPSLDVRDLLLPNLLNMPFSDFGLG-LDPELRSIIMHTTAQSFGCPACSGHGLCFGTVLKGSELYMEKTRKAFDYELHSDDLSPREIAAAAFSRALGQVPTKVTLDDRLRLARVFSRAHEETVILMSSVMALMIRFTDTFGVPLELKTLLLAEQYLQPDDEEVDGLRWNPGKYISPWDSDRLERELAQALEAGDLERKKEGIRERLKVFG---MLARSGLGDEKAKTGIPLMKGRLSVVMKRELGFCPYYLERIRFLFPRRAIAATLVHYLNVESSPQLPVELKYATCYLMANKLNSEILRAHFGYLAIASGMPTRDLCLV----GSGRYDVDLFSKTERFAFRIGEISCSSPAVLPPSLAKQLADHFRPDALVE-LITVTAIFNVLYWLVSAIPPSRYEPEIAAFADSVHGKLLRL 490
[Close]
BLAST of mRNA_L-elsbetiae_contig1950.5800.1 vs. uniprot
Match: A0A7V8WSM4_9CHLR (CMD domain-containing protein (Fragment) n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V8WSM4_9CHLR)

HSP 1 Score: 131 bits (329), Expect = 5.560e-31
Identity = 69/162 (42.59%), Postives = 94/162 (58.02%), Query Frame = 1 
Query:    1 GVTPRCDQYLELWPPGFETYNVMVPNLFDIPFCDFGVGTLTPDLRSIPAYVSSRTYGCAYCSSHTAVMGTVWKGSGLTLEKNALAMAPQPDPKVFSRKELAAINIAKKVGAVPSMVTTADIELLASCMTVEEQEAVVNACTVMGFLNRFMDASGMTLEMSAI 486
            GV P CDQYLE+W P F TYN+M+PN F++PF  FG G    D+  +  YV+SRT GC YCS+HT          G + EK A A+     P  F+  ELA + +A+ +  VP  +T++  E L  C   E+ E +V    +MGFLN+FMD  G+ LE S +
Sbjct:  101 GVVPNCDQYLEIWEPAFRTYNIMLPNFFNLPFSIFGFGEAPADVVGMGMYVASRTAGCPYCSAHTCSFAL---RRGASPEKMAQALVGGSAP--FTPGELATVAVARSLARVPCELTSSVREELTRCFRPEQAEWIVLGIVMMGFLNKFMDMIGVELEPSTV 257
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1950.5800.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWC3_9PHAE8.700e-25782.37Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FMN7_ECTSI3.800e-15454.33Probable fusion protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JXG8_9PHAE1.970e-9545.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A850G4F7_9DELT3.270e-8236.51Uncharacterized protein n=1 Tax=Pseudenhygromyxa s... [more]
A0A0C2CZ51_9DELT8.460e-8136.54Putative fusion protein n=2 Tax=Enhygromyxa salina... [more]
A0A2S9YSM1_9DELT3.780e-7538.65Uncharacterized protein n=1 Tax=Enhygromyxa salina... [more]
A0A0C2D7D5_9DELT3.500e-7237.76Uncharacterized protein n=1 Tax=Enhygromyxa salina... [more]
A6G658_9DELT1.440e-7034.88Probable fusion protein n=1 Tax=Plesiocystis pacif... [more]
A0A7S1TD96_9RHOD1.630e-4732.56Hypothetical protein n=2 Tax=Compsopogon caeruleus... [more]
A0A7V8WSM4_9CHLR5.560e-3142.59CMD domain-containing protein (Fragment) n=1 Tax=C... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1950contigL-elsbetiae_contig1950:738..10881 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score241.5
Seed ortholog evalue7.3e-61
Seed eggNOG ortholog391625.PPSIR1_29453
Hectar predicted targeting categoryother localisation
EggNOG free text desc.hydroperoxide reductase activity
EggNOG OGsCOG2128@1,COG2128@2
Ec32 ortholog descriptionAhpD-like
Ec32 orthologEc-17_001140.1
COG Functional cat.S
Best tax levelBacteria
Best eggNOG OGNA|NA|NA
Exons9
Model size1299
Cds size1299
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815809.4793673-CDS-L-elsbetiae_contig1950:737..8611622815809.4793673-CDS-L-elsbetiae_contig1950:737..861Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1950 738..861 -
1691683116.9821193-CDS-L-elsbetiae_contig1950:737..8611691683116.9821193-CDS-L-elsbetiae_contig1950:737..861Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1950 738..861 -
1622815809.4893854-CDS-L-elsbetiae_contig1950:1743..18841622815809.4893854-CDS-L-elsbetiae_contig1950:1743..1884Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1950 1744..1884 -
1691683116.9961221-CDS-L-elsbetiae_contig1950:1743..18841691683116.9961221-CDS-L-elsbetiae_contig1950:1743..1884Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1950 1744..1884 -
1622815809.5028412-CDS-L-elsbetiae_contig1950:3088..32701622815809.5028412-CDS-L-elsbetiae_contig1950:3088..3270Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1950 3089..3270 -
1691683117.006902-CDS-L-elsbetiae_contig1950:3088..32701691683117.006902-CDS-L-elsbetiae_contig1950:3088..3270Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1950 3089..3270 -
1622815809.5173292-CDS-L-elsbetiae_contig1950:4194..44151622815809.5173292-CDS-L-elsbetiae_contig1950:4194..4415Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1950 4195..4415 -
1691683117.0184314-CDS-L-elsbetiae_contig1950:4194..44151691683117.0184314-CDS-L-elsbetiae_contig1950:4194..4415Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1950 4195..4415 -
1622815809.5273907-CDS-L-elsbetiae_contig1950:5476..55491622815809.5273907-CDS-L-elsbetiae_contig1950:5476..5549Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1950 5477..5549 -
1691683117.0356765-CDS-L-elsbetiae_contig1950:5476..55491691683117.0356765-CDS-L-elsbetiae_contig1950:5476..5549Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1950 5477..5549 -
1622815809.5374327-CDS-L-elsbetiae_contig1950:5875..59841622815809.5374327-CDS-L-elsbetiae_contig1950:5875..5984Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1950 5876..5984 -
1691683117.0486445-CDS-L-elsbetiae_contig1950:5875..59841691683117.0486445-CDS-L-elsbetiae_contig1950:5875..5984Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1950 5876..5984 -
1622815809.5486958-CDS-L-elsbetiae_contig1950:6933..70581622815809.5486958-CDS-L-elsbetiae_contig1950:6933..7058Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1950 6934..7058 -
1691683117.0619648-CDS-L-elsbetiae_contig1950:6933..70581691683117.0619648-CDS-L-elsbetiae_contig1950:6933..7058Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1950 6934..7058 -
1622815809.5607345-CDS-L-elsbetiae_contig1950:9670..98331622815809.5607345-CDS-L-elsbetiae_contig1950:9670..9833Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1950 9671..9833 -
1691683117.070902-CDS-L-elsbetiae_contig1950:9670..98331691683117.070902-CDS-L-elsbetiae_contig1950:9670..9833Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1950 9671..9833 -
1622815809.5709977-CDS-L-elsbetiae_contig1950:10720..108811622815809.5709977-CDS-L-elsbetiae_contig1950:10720..10881Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1950 10721..10881 -
1691683117.0795248-CDS-L-elsbetiae_contig1950:10720..108811691683117.0795248-CDS-L-elsbetiae_contig1950:10720..10881Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1950 10721..10881 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1950.5800.1prot_L-elsbetiae_contig1950.5800.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1950 738..10881 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1950.5800.1

>prot_L-elsbetiae_contig1950.5800.1 ID=prot_L-elsbetiae_contig1950.5800.1|Name=mRNA_L-elsbetiae_contig1950.5800.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=433bp
GVTPRCDQYLELWPPGFETYNVMVPNLFDIPFCDFGVGTLTPDLRSIPAY
VSSRTYGCAYCSSHTAVMGTVWKGSGLTLEKNALAMAPQPDPKVFSRKEL
AAINIAKKVGAVPSMVTTADIELLASCMTVEEQEAVVNACTVMGFLNRFM
DASGMTLEMSAIETSLAKLAPSGWTPSIAYDPEADEELMKEDKLEASKRE
RRKEGTGFFGYVKMIIGSKMADSRAMKKIPSSDAGLFRQCQTEGGFVPYY
IRKMRHGPAKKALSFGFLLRLCQGSDEVPVKLKQLMCYQCATNAENSVLR
AHFAFMAMRSGVSLERLKQVTDVTSSGGGDSAAEVAAIAFAQAASWTPTR
MSATLAGLIARLYSPPAVIELLITVSVEFAIHRWTSVYVPRKYEPEIAQF
VKEHGVALGIPKRPCTPEQKKWGSIAAQRRKK*
back to top

mRNA from alignment at L-elsbetiae_contig1950:738..10881-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1950.5800.1 ID=mRNA_L-elsbetiae_contig1950.5800.1|Name=mRNA_L-elsbetiae_contig1950.5800.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=10144bp|location=Sequence derived from alignment at L-elsbetiae_contig1950:738..10881- (Laminarionema elsbetiae ELsaHSoW15)
GGCGTCACGCCTCGCTGTGACCAGTACCTCGAGCTCTGGCCGCCCGGCTT
CGAGACGTACAACGTCATGGTGCCCAACCTGTTCGACATCCCGTTCTGCG
ACTTCGGTGTCGGGACCCTCACGCCCGACCTCAGGAGCATCCCGGCTTAC
GTCTCCAGCAGGTGAGGGATTGCGGGTATGGAATCATGCATGATGCGTGG
GTAATTGGTTGCGGCCCACAAGTGAGATAATCTCACATATTTAGGAAATT
ACTTGTACATTGTAAGAGACTTAAGAAAGCTTGTACCAAGAAGAAAATAC
CCGCGGGACAACACTCGTTGCGTAGACTAAATACAATAGCCCCCCTCCCC
ACGACCAACTATTTGTACTGGTATTAGTTTTTTCCCGTTGGGCGATCGAT
GTGTGCGGATGGATACCAGATGCGGATGGATTTCGGATGTGTGCGGATAA
GCAATGTTGTTTTTTACTCGTGGGCATATGTATGTATGTATGTATGTATG
TATGTATGTATGTATGTATGTATGTATGTATGTATGTACGAGGCCATCAA
GAAGCTCACGAGCTCTTTGAAAAGAAAAACCAGTTGAAATAAATAAAACA
GAACTCTAACGCACGTTACCAAGGGGTCTCCCGGAATGCAGGCTGGGACT
CCACACCCTAGAAATACGATAACACCAGCATCGAGAGGGGGGGGATCTTA
ATGGGTACCATAGGATTTGGTATGGCCGTACGCGGGACGCTTGTTACCAC
CACCCCCCCCCCCTCCCTCCAATAAATCCGAGGGTTTGGGGGGCCTGACG
ACGCCATATAGAATATTGTAGAGTCCTGACGACGCCATATGCACTAATTC
CTATCACATTAAACAAGCATCGATAAGCCCACATTTTTGTTTGGGGGGGG
GGGGGGCTGTAGTATCCCAGCCTGCGTTCCGGGAGGCCCATTGACAATAT
TGAGATGGGGCTCCGTGGATCTCAACCGGTGTCCCATAGTCAGCACGATC
CGGCGGCGCAGAAAGCATAAGAAACTGCTGAAAAACTTTATTGTTCAGGA
CCTACGGGTGCGCCTACTGCTCGTCGCACACGGCCGTGATGGGCACTGTG
TGGAAAGGGAGCGGCCTGACCCTGGAGAAAAACGCTCTTGCCATGGCCCC
CCAGCCCGACCCAAAGGTCTTCAGCAGGAAGGAGCTCGCGGCGATCAACA
TCGCCAAGAAGGTTGGTAATAATATACCCACAGTAGTAGTGCACATGGGT
CTGTTTTTTTATGGACGATCCCAAAGCAGTGTTTCTCTTGTTCACATTCT
AATTTACTAACAAAACGTCAGAGTGGCCGTCTTCGCCCCACCCAGCCTGT
CGAAAAAAGTCTATTTGTTGTGGTACGCATCATGTACGTTAGACTGGCCT
CCTAGGACTTGCCATCCTTGGTTCAAAGTCCTCGCCCTGTCCCCAGGCCT
GTGCACCTCTCTCTCTCTCGCGCGTTCTATCTAAAAGGGTGTCCTGCATA
GATATGACTATCACAGCAACAACAGACATACGACTGGTGGGGTACACAAA
TCTAGATATCTACATGTATAACGTAAGATAGCTTTGTAGTTTTAGTTCTC
TCTCTGTGTCGAACATATATCGCACGGAACACACTACAATGCTATTATTA
TTATTTCGTTTGCCATCCGACAATTGCAGATTCCTTCAGTATACACACAC
AACATATCCGTACTTGTACCAACACGTGAAAGAAAACGACTTATAACCTG
ACATGTAACATCAACATTCTTAGAAGAATCTGTCGATACAATGCTGCTAT
CGTGTTTTTTTTGTTTTTTTTATATAAACAATGAATCAAAGATGGAACCT
ACCCCACACTAGAGGCAAGGACTCGATATCGATATGGGGTTCAAACGGTA
CTATTCGATACAGTGACGCAATATTTGGCGTCGGAAGCGAGCAGAAAAAC
GACCTAAAATATCAGAAGAGTTCTATATCACCCCTTGCAAAGGTTTGCGA
GGTCGGCCAACAAGTATTCAGGTTTTTCGTCTCTTTTTGTTTTCTTGTCG
TCCCACCCGGGGTCCCTTTTTTGGTGCTCCCTGGCGGGTGAACTATAGAC
TAGACTGTGTAGGAAGTTGGGCGTTTGAAGCTTTTACTTGGTTTTCACGA
AAAAAACAAAAAAATTCACCAAAAAAAAAAGAAAAAACATGCCCGAAACA
AAGAGAGAGGTCGCAGGCCAATGCGATAAAGTTGACGGCGGGGATGTATA
TGATGTGTGCCTTAAATCGGCGAGTTTTTGGTTTGTTCGCGAAGGTTTGT
GGGGAATGTATGATATGTACCTTAAAATGGCGAGTTTTTGGTTTGTTCCC
GAAGGTTTGTGGGGAATGTATGATACTAGGGTTATAAAGCGCCCCCCCCG
CCTAGACGGGGCGGTGGGGCCAGAGGGTGGTTGATTCGAAGAAATAATGC
GGCATTCGGAAAAAAAGGTGCTGGAGGTGGGTGTGTGTGTGTCGTCGGAC
GGAATGCCGACTAAGGGAGAGAGACTGGAAAACCCGCGACCGTTACTTTC
GGAAGAGAACACCAGTCGAGATGTACCGTAGAATGGCGAGTTTTGGTTTG
TTCTCGAAGGTGGGGGGATGTATGATATGCACCTTTAAATGGCGAGTTTT
GGTTTGTTCTCGAAGGTGAGGGGATGTATGATAGGGTTCGTCCGGTTAAA
TTTTCCCACGATTTCCAAAATCACTCGAGGATGAATTGATTGATGTGGAC
TGACATAACCTCCGGGGGCATACTGACTTTTTTTAACTAGGTTTTTTGGT
TAATTACCATCGTTTTTGTTTTTTATGTTGCTGTAGCACGTTATATGCTT
CCAGTCTTAGCATTTAGTTTAAAGTCCCGTTTTAAAAACTTAAAATTGAC
TACAATGCCAAACCAAAAATAAGTGAATTACTTGTTAAGATATACTATAT
ATCGTTTGAAAGCTCTCTTTCAAGCGGATCGAATGATTGTATCAGATTTT
TCGCGTAGTGTTTGGGTGGCGAGTAAATCGCGATACCGTCGTGAATTTGG
GAATTTTTGTTATGTTTTTTGGGAAGAAATGAACCGATAGAATTTAAAAA
ACTTCACGGATTTGGACGAATTGGCCCTAGGACCGTTTTTTTCTATTCTA
AAAAAAAATATTTGAGCGAGGTACGGGCGAAAAACCTGTATTTGAGACAG
CTCCGTGTTATGTTTTTTGGGAAGAATTGAACCGATAGAATTTATAAAAA
ATGACGGATTCGGACGAATTGGACCTGTCCCCAGGACCGTTTTTTTTATT
TTTTCCCAAAAACGATTTTGAGCAAGATATGGACTGTCGATGTCGGTCGA
TGCTTGTGAACCATAAACAGCGATTTCTCAACCCGTCGCCTGCACAATAT
TTGAAACATGTTTTGGTCACACGTGGTTGTACTCGTTACGGGGAGCTCGG
AACACCTTTTATTTTCTTCAGCTCGTTGGCGTTCGCTCACAATGACTCAT
TGAATTTCTCCCCAAAATTGAGCTGTATCGTTCCAATTTTTAACAAATCA
CTTGATGCTAGTATAGGTCCCGACCGGAAAGTGCTCCAATGTCCAATCAG
CCCACAAAATATGATGCCCTATGCCAACACCGTCACAAAACACCTTGTTT
TACTTTCCAACTCCCAAAATTGAGCGAGAAAAAGTGGGGGTCACGTTGTG
GGAAAATTTAACCGGACGGACTATATGTACCTTAAAATAGCGAGTTTTGT
TTTTTTTCTCGAAGGTGGGAATGGATGATTCAATATGTACCTTAAAGTAG
CGAGTGTTGGTTTGTTCTCGAAGGTGGGAGCAGTGCCCTCGATGGTGACT
ACGGCCGACATCGAGCTGCTGGCGTCCTGTATGACGGTAGAGGAGCAAGA
GGCCGTGGTGAACGCCTGCACCGTCATGGGCTTCCTCAATCGCTTCATGT
GAGTACATTGGTTGTTGACTTTTGATGAAATTATTGGCCGCCGCTAGCAG
CGAGATGGTGCTATTCTCGTGGTTTTGAGTGTGTGTGTTGCGGTGTTTCT
CCATGTACCATCTCGTTGGAACTGTCGATTTTTGTTTCCTGCTCGGTGGA
AAGGAACTATGTCCAAGGGAGAAGTTTGAATCACCCGGGCCAAATATTGC
ACCACTATGTTGTTGTGCATGGCATAATTGTTAATTCGCCGCAATGAGAC
CGCACCGCGGTACCTTTTGTGAAAAAGAGGCCGCCGTTCTGGTTTTTCTC
ATTTGTTTTCAAAAGAACATCATCAGCAGGCTCGGCTCGGCGCAATTATA
AAACGCGTTCTGTGTTTCCAAGTTCGGTGTCAAATATCACTTGCACATAC
ATCGTCGCCACCTCAAATCAAGTCGGGGAGGCAAACGGCCCTCGCGCGTC
ACACCGCTCGTATTGTTCAAAGTGCGCCGTGGGACTGCCGTAGGCGGACG
GAAGCACAGCGCGTATGCATACATACGCGATCCATTCCAGCCAGTTGTCG
GTGTAAGCAAGCTGTGGTACGAGTTTTTGGTGTTGTCTTGGGAAGATAAA
CGGAACCTAACACACATTTGAGACGGGACTCTGTGGGGCTCAACCGGTAT
TATTCCATATAGCGACGCAATGCTTGTTGTCCTTCCTTTGTCTTGCTTCT
TTGCCTGCTGGGGCCGTTCGGTGCGGCCTGTACCCGCCTGGCGAGTCTTG
ACGTCATCGTAACGTCATGCGGTCGTTGAGCTCGCGGTGGTTGGTCTGTG
CAGTGGGTCCATCGTGCAGTCTACGTCCGCCCCCTTCCCCTTGATGGGGT
CCAACTATGTACATAGAACAAGGGTTTGTTTTTACTTCGAAGTACTGACC
TTGGGTCTATTTTCCCCACTCGAATCGAATCGAACCGATCGCTGCAGGGA
CGCCTCCGGCATGACCCTTGAAATGTCGGCCATCGAGACCAGCCTGGCGA
AGCTCGCCCCAAGCGGGTGGACCCCCAGCATCGCCTATGACCCGGAGGCT
GACGAGGTTCGTGGTGGTCTTGCCATTTTTGTTTGCCCCTCTATTGTTTT
TATCCTGAAGACTCCGGCGGCGATGAGGTGACGAATGTAAGTGCAGCAGT
AGAGGGTGCGAACGCGACGCGCGAGTTAGTCAACCTTGGGGGTTTGACGA
GGTACACGTGCACCACTGCTGTCTTGACTGTCGGCCTTGCTCGTGTGTTG
GTGAGTTTTCGCACCGTTGCTCTCTTGATTGTCGGTCTTGATCGTGCATT
GATGAGTTTTTCCTGTGTTTGCGGCGTTTGTGCTGTCGTGGCGTGGCATA
TGACGTGACGTCATCGTGACGTCATGCAACAGGAGCTCATGAAGGAGGAC
AAGCTGGAGGCGAGCAAGCGGGAGAGGAGGAAAGAGGGAACCGGATTTTT
TGGATGTGAGATACCTACCGTGTCTTGTCATATCCATATTATGTTCCTGC
TGCCTGCATTGCAGCTACTGTAAGCAGTACCCGGCCCCCTTCTCGTATAA
TTTAACGTTTTTTTCTCTCCAATTGTCCTTGTGTTCTCTCGCAAAAGCAG
CAGTTGCCAAACCGTCAGGGAGCGTGTCAATGCTCACCATCACTAGAACT
CGAACATGGCCGGGATATTGAGGTACCCATTGCCACGCTCCCATGGGAAT
CCGGAAGGGGGCACCGTCTATCGGGTGTTCCGCCGGCCAGACAACTAGTG
CGCTAGCACGAAGGGGGGCAGTAGAGGAGCTAAGTGTTGGAGTGGAATTT
GTCTTGAGAAGGGTAATATGTACGTCGAGGTGACGGTGTGGCATTCATTC
AAGTACGCACAACCGGCGAGAAAAAACAAGAGGTTCTGGGCCCTTGGATG
AGGGCCCGAAGAACGTCCTCGGGTCGTGGTCTACCGAGAGCTCATGAGGC
TCCTGAAAAGAATATACATTCGATGCAGCTTCGTTTCGTATTCATGTGCT
TGCCGTGTGTGTGTATCGGTAGCGCAGAGGAGGCCGAATGCTCATGAGAG
CCCGCTGTGTACCTGCCATCGTTCGGAGAGCGAGACGTATGCCGCGGAAC
GTCCTTTTGTTTCGAGGAGGACCGAGTGTTTTTCGCGCCGCGCTCGGTCG
CTCCTGACATAGTATACCCTGTTTAGTCTACACACTGACTCCTCAGTCTT
GACCCTAGCAGTCGAACATAAGTGACCCAAGAACGCGGTTCGTGGATATG
TAAGGTGTTGGAGACCCAGGAGGCCCCCCCGTGAAAATGATGAAGCAAGC
TCAGCCACGAAACCCGGCTCGCTTTCCGTGGGTTTCTGACGCATCTTCTC
ATTCGTCCTTTTCCTCTTCGCTTATTTTTGTTTCTCGACAAATATCGGTC
TGTGTGCGTGTGTGTGTTTTTTTTTTGCGCTCTGCCTGCATGGCTGCCCC
ATGCCGTGTCCGCTGTTGCTACGGTGGTGGCGGTAACAACCAATACCACC
GCTGACATGCCCACAGACGTCAAGATGATAATCGGGAGCAAGATGGCCGA
CAGCAGGGCCATGAAGAAAATCCCCTCTTCGGATGCGGGGCTGTTCAGGC
AGTGCCAGACGGAAGGCGGCTTCGTCCCCTACTACATCCGCAAGATGAGG
CATGGACCGGCCAAGAAGGCTCTGTCCTTCGGGTTCCTTCTGAGGCTGTG
CCAGGGCTCGGACGAAGTCCCCGTGAAGCTGAAGCAGGTGTGTAGTTCTC
ACGCCCATCATGCGGATAACCTGTCAGGCTTCGATGAATCCTGTTGGTGG
GTGGCGGTAGTGGTGGCGGTGGCGTTGCAGGTGGTGGTCATGGCGTGGGA
GCGACGCTCGAGAGGGAATTGAGGGATGTTGGTTGTTTTCGCTGTGACCG
AACGTGAATGCAGCACAGGAAAACCCGAAACACCACATCCGGGGAGGCTC
CGTGGCGAGTGGTGGATGGACAGGCTGCAAAATCCTTGTTGGTTATTCAA
CGGCTAACCTATCAGACCACTCAGCCAGCACCCCATGGGATGTGCGATGC
CATTCCGCCGCCTCCACGGCCGCCGCTAGACCACCAGCTGTTCGAGTGCA
CAACACACCATAGAGGATGGTGCCATGTACAGCCATTTTCACCTGGTCTA
CCCACTGCTCCATAATCCATTTATTGAACCCACGTATGCTGCAGTAGCAA
GTGACAGCCGATAACCAACGTGGTGCGGCCATCATGCCCGCGTGATGTGG
AAGGGTGATACCCGTCGTCGACCGCCGAGGAGAAGCCTATGTAGACCTAC
CGTAGTCCGATCAACGCGGCTGATTGGTGGACTGGATGCCCCCGCCGTGC
CTCTCACGCCCCCCCCCCCCGGCCAATCCGCCCCCTCTACCCTCCTTCTC
TCTCTCTCTCTCTCCCCCTCTCTGCCTGTCTCTCTCTCTGTGTGTGTCGC
CCTCGGTCTGCCTGTTTGTCTGTGTCTCCCTTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTTTCCCTCTCTCG
GTCTGTCTCTCGCTCTCTCCCTCCCGCTCTCTGTGTCTCTGTCTCTGCCT
GTCTCTGCCTCCATATCTCCCTCGCTCTCTCTGGCCACTTATTACCTTCG
ACCCGGAACAGCTGATGTGCTATCAGTGCGCCACGAACGCCGAGAACAGC
GTGCTCCGGGCGCACTTCGCCTTCATGGCCATGCGCAGCGGCGTCAGCCT
CGAGCGGCTCAAGCAGGTGACGGACGTGACGTCCTCGGGAGGCGGGGACA
GCGCGGCGGAGGTCGCGGCAATCGCCTTCGCGCAGGCGGCTAGGTGCGTG
TGCTCTTCTCTCTGTGTGTGCGTTTGGTTTCATCCGTCGGCGTTTTCTGA
AACTGCTGTCGTCGCTGTTGTTGTTACTGTGGAGTGTGACGGCGGCTGTG
GCTCTCGCTCCGGCTGCCTGTGGCGGTTTTACTGCCAGCGGCCAAGGAGA
ATTGATACCATTTTAAATTGCGATGGCGCTGGGGTGAATAAGCGAAAATA
GACCATAACACAAGTTGCACCGCTAGATATATAGACTAACGGTTATGGGT
GTATATTATATGTTGTACTAACCAACCGCCGACCTTTTGTTTCAGTGTGC
AGAATTTTTTATTATTCTCTTCTTGTATTATTGGCTTACTCGTTGTCTGC
CCCACGGGCCCCATCCTCCACTACGACTGGCTGGACGACCCAACAGGGGT
CACGCCATGTTCACGCACATGTTCGCCAACTCCCGTGGGAAGATTACATT
CCACTTTTGTAGGACACGACCCATGGTATGGCTTGGTTGGGGCCAGGGTC
GGACAGGCCGCCCGCCACAATAGGGTGTTTGCTCTCTGTTTCTCTCACGC
GCGCTTGTGGGTGCGTTTTGTTTGGTGGACGCGACCAGGCCAGTAGGGTC
GTCATTCATGAAACGCGGTGTTCGGGTGTGTTTCGCTTGTCCTCTCGCTC
TACGTACGTCCGTACCTAGATGTGAGTGTCGCTTGTTGTGCATTGGAGTG
TTACATGGTACGATACGGTGTTAATTGTTGTAGCTCACGCCAGCAGCGGC
GGAGTTGGTTACTCCGCGTGCTGGCCAAGCGCGCTGTGCGGTTGTTCTCG
TTATTATGTGCTTCTCGCCTTTCTGGTCCTAAACCTCGCCGCGGGATCCT
TCCCTTCACTTGAAAAATGTGTTGTGTTGAGATTTTGTTTTCTCAACTGG
AAAACAAAAAATACTTCAAATCGTAGCCTGACCGACCGCTCTTTGCCCAA
CAGAGTGTGCACAAGGTGCAAGCTGTTCTCATGAAGTGAAGAGGATGCGA
CTCGCTGCAGCCCTTCATCGGCCTGCCGTGCTTGCCGAAACTCAACCTCC
TGTGTACAGCCATGACCATAAACCCATGCAACACCATCCCTCATTGATTG
CGACACCATCCCTCATGGATTGCAATACCAACCCTGCACGTGTTCTTGTT
TTGTTCTTGTGTCGTTTGTTTACCCCCCGCCTCTTTTATCTTCTCAGCTG
GACCCCCACGCGTATGTCGGCCACGCTCGCGGGCCTGATCGCGCGGCTGT
ACTCCCCTCCCGCGGTGATCGAGCTGCTCATTACCGTCTCGGTCGAGTTC
GCTATCCACAGGTGGACTTCGGTCTACGTTCCTCGAAAGTGAGAACCACA
TATGTAGAACCTCCATGTACACGATAGAAGTATGAGAAAACATAGCCTTA
AAAAAAGCCAACATCACCGCCTGCGGAAAAATAGTCCGGTATCTATCGAG
GGTTCAATTCAGGCTTTTGAGCAGTGGAAATTGCGATATTTTCCTACTTT
CCCTTGCTTCGAAGGGGGGCCTGTTTTGATGTCTCCTTTCACGCCACGAA
GATAACTCCAAGGCAACACCTTTACAACCCAGAGTCCTCAACGAGTGGTA
CCCATACCCATCCACCCACACCGCGTACCGTGAAAAATTATGCGCGCGTA
GAGGTTGGCGTGCTTGGTACAGGGGAAGCCATACATACTCTGGTGAAGCG
AGTCATATATACCTACCTGTACTCCAACAGTATTTTCCCTCCCAATGTAG
CCAACGAGTGGAAGCGGCTTTTTGCTTCTGTGTATCGGTTGTTAGCCCGT
AAGGCGCAGGTGGACCGATCCACCTTCCGCTGGTCCTCACTCAACCCTCA
GCATGTTCTCGCCCACAGCCCCTCCTGAATGCTCTCTCCCGCAACCATCA
TGTGTTGACTACGGACCAGGGGTAAGCCGGGGCCGGGTTCGCCTTAGTCT
TCCGCCGTTTTTTCGGTGTGCTGCCCTCCAAGCTTTACCACAGAAGAAGC
AGACACGCGAGGCGTTTGGGTAGGGGATTGTGGCGGGCACGCTCCTTGGT
TCTGCTGCTGCTCTCTATGTCTCTCTCCGCTCACCGAAATATCTTGTACA
CGCATGGGCACACACACACCCTTGTGTTGCCGTCTTACTCTATATTGCAA
GAGCCCACTTTGAGCTGGTGGTCGTGCTCGAAGTGCAACACCGTTCGTGT
GATGTTTCCGCTGTCGGCAGGTACGAGCCGGAGATCGCCCAGTTCGTGAA
GGAGCATGGGGTGGCTCTTGGGATCCCCAAGCGTCCGTGCACGCCGGAGC
AGAAGAAGTGGGGAAGCATTGCCGCGCAGAGGCGCAAGAAGTGA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1950:738..10881-

>mRNA_L-elsbetiae_contig1950.5800.1 ID=mRNA_L-elsbetiae_contig1950.5800.1|Name=mRNA_L-elsbetiae_contig1950.5800.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2598bp|location=Sequence derived from alignment at L-elsbetiae_contig1950:738..10881- (Laminarionema elsbetiae ELsaHSoW15)
GGCGTCACGCCTCGCTGTGACCAGTACCTCGAGCTCTGGCCGCCCGGCTT
CGAGACGTACAACGTCATGGTGCCCAACCTGTTCGACATCCCGTTCTGCG
ACTTCGGTGTCGGGACCCTCACGCCCGACCTCAGGAGCATCCCGGCTTAC
GTCTCCAGCAGGGCGTCACGCCTCGCTGTGACCAGTACCTCGAGCTCTGG
CCGCCCGGCTTCGAGACGTACAACGTCATGGTGCCCAACCTGTTCGACAT
CCCGTTCTGCGACTTCGGTGTCGGGACCCTCACGCCCGACCTCAGGAGCA
TCCCGGCTTACGTCTCCAGCAGGACCTACGGGTGCGCCTACTGCTCGTCG
CACACGGCCGTGATGGGCACTGTGTGGAAAGGGAGCGGCCTGACCCTGGA
GAAAAACGCTCTTGCCATGGCCCCCCAGCCCGACCCAAAGGTCTTCAGCA
GGAAGGAGCTCGCGGCGATCAACATCGCCAAGAAGGACCTACGGGTGCGC
CTACTGCTCGTCGCACACGGCCGTGATGGGCACTGTGTGGAAAGGGAGCG
GCCTGACCCTGGAGAAAAACGCTCTTGCCATGGCCCCCCAGCCCGACCCA
AAGGTCTTCAGCAGGAAGGAGCTCGCGGCGATCAACATCGCCAAGAAGGT
GGGAGCAGTGCCCTCGATGGTGACTACGGCCGACATCGAGCTGCTGGCGT
CCTGTATGACGGTAGAGGAGCAAGAGGCCGTGGTGAACGCCTGCACCGTC
ATGGGCTTCCTCAATCGCTTCATGTGGGAGCAGTGCCCTCGATGGTGACT
ACGGCCGACATCGAGCTGCTGGCGTCCTGTATGACGGTAGAGGAGCAAGA
GGCCGTGGTGAACGCCTGCACCGTCATGGGCTTCCTCAATCGCTTCATGG
ACGCCTCCGGCATGACCCTTGAAATGTCGGCCATCGAGACCAGCCTGGCG
AAGCTCGCCCCAAGCGGGTGGACCCCCAGCATCGCCTATGACCCGGAGGC
TGACGAGGGACGCCTCCGGCATGACCCTTGAAATGTCGGCCATCGAGACC
AGCCTGGCGAAGCTCGCCCCAAGCGGGTGGACCCCCAGCATCGCCTATGA
CCCGGAGGCTGACGAGGAGCTCATGAAGGAGGACAAGCTGGAGGCGAGCA
AGCGGGAGAGGAGGAAAGAGGGAACCGGATTTTTTGGATGAGCTCATGAA
GGAGGACAAGCTGGAGGCGAGCAAGCGGGAGAGGAGGAAAGAGGGAACCG
GATTTTTTGGATACGTCAAGATGATAATCGGGAGCAAGATGGCCGACAGC
AGGGCCATGAAGAAAATCCCCTCTTCGGATGCGGGGCTGTTCAGGCAGTG
CCAGACGGAAGGCGGCTTCGTCCCCTACTACATCCGCAAGATGAGGCATG
GACCGGCCAAGAAGGCTCTGTCCTTCGGGTTCCTTCTGAGGCTGTGCCAG
GGCTCGGACGAAGTCCCCGTGAAGCTGAAGCAGACGTCAAGATGATAATC
GGGAGCAAGATGGCCGACAGCAGGGCCATGAAGAAAATCCCCTCTTCGGA
TGCGGGGCTGTTCAGGCAGTGCCAGACGGAAGGCGGCTTCGTCCCCTACT
ACATCCGCAAGATGAGGCATGGACCGGCCAAGAAGGCTCTGTCCTTCGGG
TTCCTTCTGAGGCTGTGCCAGGGCTCGGACGAAGTCCCCGTGAAGCTGAA
GCAGCTGATGTGCTATCAGTGCGCCACGAACGCCGAGAACAGCGTGCTCC
GGGCGCACTTCGCCTTCATGGCCATGCGCAGCGGCGTCAGCCTCGAGCGG
CTCAAGCAGGTGACGGACGTGACGTCCTCGGGAGGCGGGGACAGCGCGGC
GGAGGTCGCGGCAATCGCCTTCGCGCAGGCGGCTAGCTGATGTGCTATCA
GTGCGCCACGAACGCCGAGAACAGCGTGCTCCGGGCGCACTTCGCCTTCA
TGGCCATGCGCAGCGGCGTCAGCCTCGAGCGGCTCAAGCAGGTGACGGAC
GTGACGTCCTCGGGAGGCGGGGACAGCGCGGCGGAGGTCGCGGCAATCGC
CTTCGCGCAGGCGGCTAGCTGGACCCCCACGCGTATGTCGGCCACGCTCG
CGGGCCTGATCGCGCGGCTGTACTCCCCTCCCGCGGTGATCGAGCTGCTC
ATTACCGTCTCGGTCGAGTTCGCTATCCACAGGTGGACTTCGGTCTACGT
TCCTCGAAACTGGACCCCCACGCGTATGTCGGCCACGCTCGCGGGCCTGA
TCGCGCGGCTGTACTCCCCTCCCGCGGTGATCGAGCTGCTCATTACCGTC
TCGGTCGAGTTCGCTATCCACAGGTGGACTTCGGTCTACGTTCCTCGAAA
GTACGAGCCGGAGATCGCCCAGTTCGTGAAGGAGCATGGGGTGGCTCTTG
GGATCCCCAAGCGTCCGTGCACGCCGGAGCAGAAGAAGTGGGGAAGCATT
GCCGCGCAGAGGCGCAAGAAGTGAGTACGAGCCGGAGATCGCCCAGTTCG
TGAAGGAGCATGGGGTGGCTCTTGGGATCCCCAAGCGTCCGTGCACGCCG
GAGCAGAAGAAGTGGGGAAGCATTGCCGCGCAGAGGCGCAAGAAGTGA
back to top