mRNA_L-elsbetiae_contig195.5797.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig195.5797.1
Unique NamemRNA_L-elsbetiae_contig195.5797.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig195.5797.1 vs. uniprot
Match: D8LC10_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC10_ECTSI)

HSP 1 Score: 414 bits (1065), Expect = 9.150e-138
Identity = 248/298 (83.22%), Postives = 255/298 (85.57%), Query Frame = 1 
Query:    1 MVRSSALPAALVVLASSSCTAFVAPLAPARVSTAPS---MSLKGPAGRSSSPISKATGIVSKALFGRPGS-KAGNSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNNDALAMLGVLATIKGGAGGAWDAYNGALAEKPILVKACTSLVGFSIGDFLAQKGTAKDKEKFSYERLARMAAFGFLFHGTISHFFYNALDAALPGTAAMTVIQKVVIDQVFWAPIFTLIFFTWIGVTSGNSPSEIVTKVKSDLVQGVVGSWTVWPLAHTINFKFVPTEQRLLYINSIQIFYNVFLSIIGSK 882
            MVR SALPAALV L SSSCTAFV PL   RV  APS   MSLKGPAGRSSSPI+KA  +V KALFGRPG  K GN  XXXXXXXXXXXXXXXXX              DALAMLGVLAT+K GAGGAWDAYN ALA+KPILVKACTS VGFSIGDFLAQKGT+K  E FSY RLARMAAFGFLFHGTISHFFYNALD+ALPGTAAMTVIQKV+IDQVFWAPIFTLIFFTWIGVTSG SPSEIV KVKSDLVQGVVGSWTVWPLAHTINFKFVPTEQRLLYINSIQIFYNVFLSIIGSK
Sbjct:    1 MVRCSALPAALVALGSSSCTAFVTPLV-TRVPVAPSTTSMSLKGPAGRSSSPINKAASVVGKALFGRPGGVKMGNXXXXXXXXXXXXXXXXXXXQGSFDDNEEEGRGMDALAMLGVLATVKDGAGGAWDAYNSALADKPILVKACTSFVGFSIGDFLAQKGTSK--ESFSYARLARMAAFGFLFHGTISHFFYNALDSALPGTAAMTVIQKVIIDQVFWAPIFTLIFFTWIGVTSGASPSEIVAKVKSDLVQGVVGSWTVWPLAHTINFKFVPTEQRLLYINSIQIFYNVFLSIIGSK 295
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BLAST of mRNA_L-elsbetiae_contig195.5797.1 vs. uniprot
Match: A0A836CE62_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE62_9STRA)

HSP 1 Score: 256 bits (655), Expect = 1.660e-76
Identity = 125/189 (66.14%), Postives = 145/189 (76.72%), Query Frame = 1 
Query:  316 ALAMLGVLATIKGGAGGAWDAYNGALAEKPILVKACTSLVGFSIGDFLAQKGTAKDKEKFSYERLARMAAFGFLFHGTISHFFYNALDAALPGTAAMTVIQKVVIDQVFWAPIFTLIFFTWIGVTSGNSPSEIVTKVKSDLVQGVVGSWTVWPLAHTINFKFVPTEQRLLYINSIQIFYNVFLSIIGSK 882
            ALA +GVL  +       WD+YN  L EKPIL KACTSLVGFS+GD LAQK  AK  E+F Y+RLARMAAFGF+FHGTISHFFYN LD  +PG   + + QKV  DQV WAPIFT ++ TW+GVTSG SP E+  K+K+DLV+GVVGSW+VWPL H I FKFVP EQRLLYIN IQI YNVFLS++GS 
Sbjct:  104 ALAAMGVLGDL-------WDSYNKVLGEKPILTKACTSLVGFSVGDTLAQKFVAKG-ERFDYQRLARMAAFGFMFHGTISHFFYNKLDEVIPGKTPLAIAQKVFTDQVLWAPIFTFVYLTWMGVTSGLSPPEVGEKIKTDLVKGVVGSWSVWPLVHAIGFKFVPLEQRLLYINCIQIGYNVFLSVLGSN 284
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BLAST of mRNA_L-elsbetiae_contig195.5797.1 vs. uniprot
Match: A0A835Z5E2_9STRA (Peroxisomal membrane protein-related n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5E2_9STRA)

HSP 1 Score: 214 bits (544), Expect = 6.630e-62
Identity = 104/173 (60.12%), Postives = 126/173 (72.83%), Query Frame = 1 
Query:  364 GAWDAYNGALAEKPILVKACTSLVGFSIGDFLAQKGTAKDKEKFSYERLARMAAFGFLFHGTISHFFYNALDAALPGTAAMTVIQKVVIDQVFWAPIFTLIFFTWIGVTSGNSPSEIVTKVKSDLVQGVVGSWTVWPLAHTINFKFVPTEQRLLYINSIQIFYNVFLSIIGSK 882
            G W AYN AL  +P+LVKACTSL GF++GD LAQK   KD E + + R  R+ +FG L HG   H+FY  LD+ LPGTA MTV  KV IDQ  W PIF ++FF+++G+T G S  +I  K+K+DL   V+GSWTVW  AHTINFKFVPT QRLLYINSIQI YNVFLS +G+K
Sbjct:    3 GIWAAYNRALTAQPLLVKACTSLTGFTVGDILAQKFINKDAE-YDFMRTVRLGSFGALVHGPTGHWFYGMLDSKLPGTAPMTVATKVAIDQTIWNPIFGIMFFSYLGLTEGKSVDQIYQKIKADLATAVMGSWTVWIPAHTINFKFVPTSQRLLYINSIQIGYNVFLSFLGNK 174
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BLAST of mRNA_L-elsbetiae_contig195.5797.1 vs. uniprot
Match: A0A7S2FYX3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FYX3_9STRA)

HSP 1 Score: 215 bits (548), Expect = 1.590e-61
Identity = 102/173 (58.96%), Postives = 127/173 (73.41%), Query Frame = 1 
Query:  364 GAWDAYNGALAEKPILVKACTSLVGFSIGDFLAQKGTAKDKEKFSYERLARMAAFGFLFHGTISHFFYNALDAALPGTAAMTVIQKVVIDQVFWAPIFTLIFFTWIGVTSGNSPSEIVTKVKSDLVQGVVGSWTVWPLAHTINFKFVPTEQRLLYINSIQIFYNVFLSIIGSK 882
            G W AYN  L   PIL KA TS++GF++GD LAQ    K K ++   R  R+A+FGFL HGT  H+FY  LD A+PGT AM V  KV IDQV W PIF ++FF+++G T+G+ P+ +  KVK DL+  V GSWTVWP+AH INF+F+PT QRLLYIN+IQIFYNVFLSIIG+K
Sbjct:   83 GLWAAYNNKLETNPILTKALTSMIGFTLGDILAQNFVEK-KGEYDIMRTIRLASFGFLIHGTTGHWFYGKLDKAIPGTGAMQVFSKVGIDQVLWNPIFGVMFFSYMGFTNGDGPAAVAAKVKRDLMTQVTGSWTVWPIAHAINFRFIPTSQRLLYINTIQIFYNVFLSIIGNK 254
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BLAST of mRNA_L-elsbetiae_contig195.5797.1 vs. uniprot
Match: A0A5J4YL21_PORPP (Protein sym-1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YL21_PORPP)

HSP 1 Score: 212 bits (540), Expect = 7.750e-60
Identity = 101/171 (59.06%), Postives = 119/171 (69.59%), Query Frame = 1 
Query:  370 WDAYNGALAEKPILVKACTSLVGFSIGDFLAQKGTAKDKEKFSYERLARMAAFGFLFHGTISHFFYNALDAALPGTAAMTVIQKVVIDQVFWAPIFTLIFFTWIGVTSGNSPSEIVTKVKSDLVQGVVGSWTVWPLAHTINFKFVPTEQRLLYINSIQIFYNVFLSIIGSK 882
            W AYN AL  +P+L+KA TS VGFS+GD LAQK            RL RMAAFGFL HG   H+FY ALD A+PGT A  V  KV IDQ+ WAPIFT++FF +IG   G S  +I  KVK D   GV GSW VWPL HTINF+F+P+ QRLLYIN+IQI YN+FLS+I +K
Sbjct:  117 WKAYNSALEAQPLLIKAMTSFVGFSLGDILAQKFLGPKNAALDMNRLGRMAAFGFLIHGPTGHYFYGALDRAIPGTEAWKVASKVAIDQILWAPIFTVMFFAFIGAMEGRSVDDIKQKVKRDTWTGVTGSWKVWPLVHTINFRFIPSSQRLLYINTIQIAYNMFLSLIANK 287
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BLAST of mRNA_L-elsbetiae_contig195.5797.1 vs. uniprot
Match: A0A7S1UKV6_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UKV6_9STRA)

HSP 1 Score: 205 bits (521), Expect = 3.880e-58
Identity = 99/174 (56.90%), Postives = 126/174 (72.41%), Query Frame = 1 
Query:  361 GGAWDAYNGALAEKPILVKACTSLVGFSIGDFLAQKGTAKDKEKFSYERLARMAAFGFLFHGTISHFFYNALDAALPGTAAMTVIQKVVIDQVFWAPIFTLIFFTWIGVTSGNSPSEIVTKVKSDLVQGVVGSWTVWPLAHTINFKFVPTEQRLLYINSIQIFYNVFLSIIGSK 882
            GG WD YN AL   P++VK  TSLVGFS+GD LAQ    K  EKF + RLAR+A+FGFL HGT+ H+FY  LD   PGT A TV  KV IDQV + P+F  IFFT++G+ +G+S  ++  K++ D+   VVGSWTVW  AHTINFKF+  +QRLLYIN++QI YN+FLS +G+K
Sbjct:   43 GGLWDKYNAALEANPLIVKCLTSLVGFSLGDILAQLFVEK-VEKFDFARLARLASFGFLLHGTMGHYFYGFLDGKFPGTNAATVATKVGIDQVLFNPVFGSIFFTYMGLAAGDSLGDVKAKIQRDIKTAVVGSWTVWVPAHTINFKFISPQQRLLYINTVQIGYNIFLSFLGNK 215
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BLAST of mRNA_L-elsbetiae_contig195.5797.1 vs. uniprot
Match: A0A835Z9Q4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Q4_9STRA)

HSP 1 Score: 207 bits (527), Expect = 9.840e-58
Identity = 99/177 (55.93%), Postives = 127/177 (71.75%), Query Frame = 1 
Query:  352 GGAGGAWDAYNGALAEKPILVKACTSLVGFSIGDFLAQKGTAKDKEKFSYERLARMAAFGFLFHGTISHFFYNALDAALPGTAAMTVIQKVVIDQVFWAPIFTLIFFTWIGVTSGNSPSEIVTKVKSDLVQGVVGSWTVWPLAHTINFKFVPTEQRLLYINSIQIFYNVFLSIIGSK 882
            GG    W AYN +L ++PIL KA TS++GF +GDFLAQK  +K  EK  +ERL RMA+FG L HGT  HFFY  LD+ +PGTAA+TV  KV IDQ  W PIF  +FF ++G   G SPS +  +++++L   V GSWTVWP+AH INF+ +PT QRLLYINS+QI YN+FLSI+  +
Sbjct:  112 GGLMAIWAAYNNSLDKRPILTKALTSMIGFGLGDFLAQKFISKS-EKIDWERLGRMASFGLLIHGTTGHFFYGMLDSKIPGTAALTVATKVFIDQAIWNPIFGCMFFGYMGFAEGLSPSAVKARIQNNLWASVKGSWTVWPVAHAINFRCIPTSQRLLYINSVQIGYNMFLSILSQR 287
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BLAST of mRNA_L-elsbetiae_contig195.5797.1 vs. uniprot
Match: D8LGB2_ECTSI (Peroxisomal membrane protein-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGB2_ECTSI)

HSP 1 Score: 203 bits (516), Expect = 1.310e-57
Identity = 98/173 (56.65%), Postives = 122/173 (70.52%), Query Frame = 1 
Query:  364 GAWDAYNGALAEKPILVKACTSLVGFSIGDFLAQKGTAKDKEKFSYERLARMAAFGFLFHGTISHFFYNALDAALPGTAAMTVIQKVVIDQVFWAPIFTLIFFTWIGVTSGNSPSEIVTKVKSDLVQGVVGSWTVWPLAHTINFKFVPTEQRLLYINSIQIFYNVFLSIIGSK 882
            G W AYN ALA +P+LVKA TS  GF++GD LAQK  + + + + + R  R+  FG L HG   H+FY  LDA LPGT  MTV  KV IDQ  W PIF ++FFT++G+  G S  +I  K+K+DL   V+GSWTVW  AHTINFKFVPT QRLLYIN+IQI YN+FLS +G+K
Sbjct:    3 GIWAAYNKALAAQPLLVKAMTSFTGFTVGDILAQKFISPEDD-YDFMRTLRLGTFGALVHGPTGHYFYGMLDAKLPGTKPMTVASKVAIDQTIWNPIFGVMFFTYLGLAEGKSVDDIQKKIKNDLATAVMGSWTVWIPAHTINFKFVPTSQRLLYINTIQIGYNIFLSFLGNK 174
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BLAST of mRNA_L-elsbetiae_contig195.5797.1 vs. uniprot
Match: A0A7S2XWX9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWX9_9STRA)

HSP 1 Score: 206 bits (524), Expect = 1.670e-57
Identity = 98/181 (54.14%), Postives = 122/181 (67.40%), Query Frame = 1 
Query:  370 WDAYNGALAEKPILVKACTSLVGFSIGDFLAQKGTAKDKEKFSYERLARMAAFGFLFHGTISHFFYNALDAALPGTAAMTVIQKVVIDQVFWAPIFTLIFFTWIGVTSGNSPSEIVTKVKSDLVQGVVGSWTVWPLAHTINFKFVPTEQRLLYINSIQIFYNVFLSIIGSK*TLTYQTAER 912
            W AYN AL   PI  KA TSLVGFS+GD LAQK  +   E F + R+AR+A+FG LFHG + H+FY  LD  +PGTA   V  KV IDQ+ W PIF   F  ++G   G +  E+  K+K+DLV+ V GSWTVWP+AH INF+F+PT QRLLYINSIQ+FYN FLS + S  + T + A  
Sbjct:  118 WAAYNAALESSPITTKALTSLVGFSLGDILAQKFLSAG-EPFDFLRMARLASFGLLFHGPVGHYFYGFLDTKIPGTALSVVASKVAIDQIIWNPIFGTFFLGYMGFAEGKNAGEVGQKIKNDLVKAVTGSWTVWPIAHAINFRFIPTSQRLLYINSIQVFYNCFLSFLASGGSSTAEVATE 297
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BLAST of mRNA_L-elsbetiae_contig195.5797.1 vs. uniprot
Match: A0A7S0BQD5_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BQD5_9RHOD)

HSP 1 Score: 204 bits (519), Expect = 3.460e-57
Identity = 102/170 (60.00%), Postives = 120/170 (70.59%), Query Frame = 1 
Query:  370 WDAYNGALAEKPILVKACTSLVGFSIGDFLAQKGTAKDKEKFSYERLARMAAFGFLFHGTISHFFYNALDAALPGTAAMTVIQKVVIDQVFWAPIFTLIFFTWIGVTSGNSPSEIVTKVKSDLVQGVVGSWTVWPLAHTINFKFVPTEQRLLYINSIQIFYNVFLSIIGS 879
            W AYN  L  +PIL KA TSLVGF++GD LAQK      E+F Y+RL RMAAFG LFHG   H+FY  LD  + GT  + VI KV IDQ+ WAPIF + FF  +G   G S  EI  K+++DLV  V  SW VWPLAH INF+F+PTEQRLLYIN+IQI YNVFLSIIG+
Sbjct:   90 WAAYNSLLETQPILTKALTSLVGFAVGDLLAQKYLGD--EEFKYDRLLRMAAFGALFHGPTGHYFYGFLDRLIVGTEPLKVISKVAIDQLLWAPIFGVAFFGILGAMEGKSVKEIKAKIENDLVTAVTTSWKVWPLAHAINFRFIPTEQRLLYINAIQIGYNVFLSIIGN 257
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig195.5797.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC10_ECTSI9.150e-13883.22Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CE62_9STRA1.660e-7666.14Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z5E2_9STRA6.630e-6260.12Peroxisomal membrane protein-related n=1 Tax=Tribo... [more]
A0A7S2FYX3_9STRA1.590e-6158.96Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A5J4YL21_PORPP7.750e-6059.06Protein sym-1 n=1 Tax=Porphyridium purpureum TaxID... [more]
A0A7S1UKV6_9STRA3.880e-5856.90Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A835Z9Q4_9STRA9.840e-5855.93Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LGB2_ECTSI1.310e-5756.65Peroxisomal membrane protein-related n=1 Tax=Ectoc... [more]
A0A7S2XWX9_9STRA1.670e-5754.14Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0BQD5_9RHOD3.460e-5760.00Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig195contigL-elsbetiae_contig195:5749..11859 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score417.2
Seed ortholog evalue6.6e-114
Seed eggNOG ortholog2880.D8LC10
KEGG koko:K13348
KEGG Pathwayko04146,map04146
Hectar predicted targeting categorychloroplast
EggNOG free text desc.Belongs to the peroxisomal membrane protein PXMP2 4 family
EggNOG OGsKOG1944@1,KOG1944@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Ec32 ortholog descriptionMpv17/PMP22
Ec32 orthologEc-20_004020.1
Exons5
Model size2055
Cds size885
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig195.5797.1prot_L-elsbetiae_contig195.5797.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig195 6919..11859 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815809.01038-UTR-L-elsbetiae_contig195:5748..69181622815809.01038-UTR-L-elsbetiae_contig195:5748..6918Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig195 5749..6918 -
1691683116.6218588-UTR-L-elsbetiae_contig195:5748..69181691683116.6218588-UTR-L-elsbetiae_contig195:5748..6918Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig195 5749..6918 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815809.026774-CDS-L-elsbetiae_contig195:6918..71821622815809.026774-CDS-L-elsbetiae_contig195:6918..7182Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig195 6919..7182 -
1691683116.6372948-CDS-L-elsbetiae_contig195:6918..71821691683116.6372948-CDS-L-elsbetiae_contig195:6918..7182Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig195 6919..7182 -
1622815809.0371237-CDS-L-elsbetiae_contig195:7929..80021622815809.0371237-CDS-L-elsbetiae_contig195:7929..8002Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig195 7930..8002 -
1691683116.6489794-CDS-L-elsbetiae_contig195:7929..80021691683116.6489794-CDS-L-elsbetiae_contig195:7929..8002Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig195 7930..8002 -
1622815809.0470715-CDS-L-elsbetiae_contig195:8520..86511622815809.0470715-CDS-L-elsbetiae_contig195:8520..8651Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig195 8521..8651 -
1691683116.659857-CDS-L-elsbetiae_contig195:8520..86511691683116.659857-CDS-L-elsbetiae_contig195:8520..8651Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig195 8521..8651 -
1622815809.0576642-CDS-L-elsbetiae_contig195:11047..112871622815809.0576642-CDS-L-elsbetiae_contig195:11047..11287Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig195 11048..11287 -
1691683116.6697724-CDS-L-elsbetiae_contig195:11047..112871691683116.6697724-CDS-L-elsbetiae_contig195:11047..11287Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig195 11048..11287 -
1622815809.0701375-CDS-L-elsbetiae_contig195:11682..118591622815809.0701375-CDS-L-elsbetiae_contig195:11682..11859Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig195 11683..11859 -
1691683116.679519-CDS-L-elsbetiae_contig195:11682..118591691683116.679519-CDS-L-elsbetiae_contig195:11682..11859Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig195 11683..11859 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig195.5797.1

>prot_L-elsbetiae_contig195.5797.1 ID=prot_L-elsbetiae_contig195.5797.1|Name=mRNA_L-elsbetiae_contig195.5797.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=295bp
MVRSSALPAALVVLASSSCTAFVAPLAPARVSTAPSMSLKGPAGRSSSPI
SKATGIVSKALFGRPGSKAGNSNNGDGGGMMGGGNNNGDNGQGSFDDSEE
DSNNDALAMLGVLATIKGGAGGAWDAYNGALAEKPILVKACTSLVGFSIG
DFLAQKGTAKDKEKFSYERLARMAAFGFLFHGTISHFFYNALDAALPGTA
AMTVIQKVVIDQVFWAPIFTLIFFTWIGVTSGNSPSEIVTKVKSDLVQGV
VGSWTVWPLAHTINFKFVPTEQRLLYINSIQIFYNVFLSIIGSK*
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mRNA from alignment at L-elsbetiae_contig195:5749..11859-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig195.5797.1 ID=mRNA_L-elsbetiae_contig195.5797.1|Name=mRNA_L-elsbetiae_contig195.5797.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6111bp|location=Sequence derived from alignment at L-elsbetiae_contig195:5749..11859- (Laminarionema elsbetiae ELsaHSoW15)
ATGGTGCGTTCTTCCGCTCTTCCCGCGGCCCTCGTGGTGCTAGCGTCGTC
CTCATGCACCGCCTTTGTCGCTCCTCTGGCGCCGGCCCGCGTCTCGACCG
CCCCGAGCATGTCGTTGAAGGGGCCAGCGGGACGCTCGTCTTCCCCCATC
AGCAAGGCCACGGGGATCGTCAGCAAGGTAAGCCAACCTTCTACTGATCG
ACGCGAGGAAAGTAAAGGCACGAAGGCAACATCAAGGACCGAGCTCTTGT
ATTGCATGATCGACAGAGACCACTTTCGCGCGCCACTTTTGTGCACGCCG
CTCCCGCCCCTACTGTTCGAAAAACAGAGCCGTCTCTGCTGTCTACGTTT
GTGGCATGGCAGAGCCTTCCCTCCCTCCTTCCCTCCCCAACAATATTCAG
TCCAACGACCAGAGAGTCGCTTACACACATCACGAGAAAGTGTTCGAGCT
GGCCGGTTCGCAACTTTTTGCAATCTTCAATCTTGCCAAAAAAAAACCTG
CGCGCTTCAACTACTTTCCAGCTCACTTCCCTCTCTCTGATCCTTGCTTT
CTTTCTCCTCTATGGGTAGTAGGCTCTTTTCGGCCGGCCTGGAAGCAAAG
CGGGCAACAGCAACAACGGTGACGGCGGTGGCATGATGGGCGGCGGCAAC
AACAACGGCGACAACGGGCAGGGGTCCTTCGACGACAGCGAGGAGGACAG
CAACAACGACGCGCTGGCCATGCTGGGCGTGCTCGCCACTATTAAGGGCG
GTGCGGGGGGCGCCTGGGACGCGTACAACGGGGCGTTGGCAGAAAAGCCG
ATTCTCGTCAAGGTCAGGAGAGCTTTACCTGCGGTGTCGCCATCCCCGTT
TGATTCTAAACTTCCCCGTTACAACAGAGTTGTGTAGTGTATGTTGTACT
CAAGTGTGACCAGGAGAACGCAGAACAATCAACTGCAGCAGCAGCAGCAG
CACCAGCAGTGGAACATATTCTACCGGCTGCATCTATATGTATCGACATT
GTGCGACCACACGGTTGAGAGCTCTGGCCTGGCAAGATACCCCCTATAGG
AGCCCTTCGAGCGCTGGAAATAAGTATGACTATGACGAAACAAAAAAAAA
ATGAAAGAAAAGCCCCACGTACTGCTGTTTCGGTCGCATCATTTGTTCAA
GCCGCAGCAGCAGGTGTATTTTTTATGCACATAGGTAGATGAGTCGGCTG
TTTCGTACAGATTTCAAAATTCGGTACGTCTGCAGCAGCAGCGCTTCTGC
CGCCGTCAAAAAACAAGTGGGCAGACGTGTCGGTTTGCGGTTGTTGCTTT
CCGTCATGTATGCAGGTAAACAAACCACCGGGCGCGTATGTACCATAGTT
TGTGTATTTTTTCTTCCGTGGCGTGAGTGTGCCTTGTTTTGTGACCACGG
GCCCCCAAGGATGTTTTGGACTAGAGAGCTAATGTGAGAAACAACAACAA
CACCATACTTATACGTACATACATACAAGGGGGCTTCGCCTGCACCCCTG
TCGGGGTGGAGGCTACGCGTATGCCCCGTAGGATAGTATCAATCAGTATA
AGAGAGAGGATGTAGGGGTGCAGGCTACGCTGTATGCTTCGTATGAGATT
ATCAGAATGTGCCTTGGCATGAGTAGACACGGGAAATTGTAATGTATCGA
ATGCCAAGGTGTGTAGTTATTGCTGTGATGTATTATCTCGCGTAAGGAGA
CCATGTACATAAAGATACACCATATAGATATACATCCAACTCTCCGCACT
ACACACTACTGCTCTCCGCACTACACACTACTGTGCGATCTTCTCAGATA
TTATCCACAGCGTATACACTACATACACTACAGCAGGCCGTCTTATTTGT
ACCCTCCCGAGCTCAATCTTCGTAATGTAACGGTTGCACATGCATGCAGG
CCGCTTCCATCAGAAAAAGGCTGATGATATATGTTCCGAACTTCATTGCC
ATTTACCCGTCCGGGCAGACATAGGTACATGCCTCTACCGAGCTTGTACG
TGCGCCGAGTGCAGTAGGTAGACTGTATATATATCCCAGGCGCGCATCGC
ATTCATGCAGTGTGGTATAACCTGCGCACCCTCAAAGCAAGAAGGTGGAC
ATCAACGTATGTGACCTTACCTCACCACATCGTCGACAGAAGCGAGTTCT
AGGAATATTCTGACCTTTTGGCGTAGGTGGTGTGGTTTGTGATCTGCAGC
TCGTGATCTGTGACGTGTGCGGGACTGTCAAAAGCGCGCGCGCACTCCGC
CTAGCCCTACCCCTGCCCTCCAACCTAGCACCTAATCAAGACACCCTGTG
ACACAGAACTTAACCAACGTCTGACCCTAACCCTATATCTAGGCATTTCC
ATCGCACGCATCGCATATGTTGTGTATGTATGTATGTTGTCTTCACATTA
AAAACCGTTCCGATCTCTCCATCCAGTACCTCTCAATGTCCGTACTAATC
CAATACTTGATGCGGTCAATTCCCGTGGTCACAGGCTAGCTTATACCTAA
GAAAAGGTACACGAAAAATAAAATGGACCCAAAGGGCCAGCAAAGCAATA
ATATAACAGATATCGAGTCTGGAGCCCTTCGCTCCCCTCTACAGGCAAAG
ATAACGCGGGTGAACCTCATTTTAGTTGGGCTGTCAGGCTCGGCCAATCA
GCCATATGCTTACGTATGAGAACCGGCCGCAGCTCGAGCAGACATAGGCG
CGTAGCTCCACCCACAGGGCACGCCAGTTCATGAGATTTGCGAGGGTTGC
ATGGTTATTAAGCTTGTCATCATGCAAAAAAAAACTGCGCAAAAATAAAA
AACGATGCACGCAAACCGGAGAATGTGGGCCTCTACTGTAGGGCTCGGAT
AGAGCTCAGGCAGTGACGTGACTACGAAATAGAGCGGTATTTGACTCTTA
AGCTTCGAAACGGCACTAGATCATAGTAGATAGAGGTGCAAACATAACGG
CGCACCCAAAAACCTGTGACGTCGTTTATTCGACATCGTCGGTCATCCAT
TCGTCGGTGTATCTAAAAAAGTACGAACCAACTTCATGAGAGTTACCCTG
CTTGATGTACTGGTACGTTTGTAGAAGGTTTTTATTGTTTCGTTCGTCGG
TTGATGAGATCAAAAGAACGCATGACCCCCCCACCCCCCCTCCCTACGTT
GCACATGTTCCTAACAAGACCCCCGCGCAACTACTGTTGAACGTCGCACT
CTCTTCAGGCTTGCACGTCACTGGTGGGCTTCTCAATCGGCGATTTCCTG
GCCCAGAAGGGCACCGCTAAGGATAAGGAAAAGTTCTCGTATGAGCGACT
GGCCCGCATGGCCGCGTTCGGGTTCTTGTTCCACGGGACGTGAGTGCTGC
TGCGTACATACACATACATACATACCTTCCTTTGCCGTGATTTGTTGTGC
CCCTGCCGCGCTTCCGTTGTCATCAGTAGTCTACGCGGGGTTTTTGTCTT
AAGCTAACATATGGGATAAAGTATGGAAACCGTTTGGGGTGGTCGGTGTT
TGGGGTTAGGGTTAGAGTTAGTACTGTAGTATAAAATTAAGTTCTGCGTA
GGCGGCCCGTTGTCATGGTTTTTGGGCTTGGGCCATCGTTTTTTGAGTTT
TCAAACACATCACTCGACAATTTGTTTGGTGGCTTTTTGCCTGCTGGCGC
AAGTCTGCGGGTTCTAGATACTGCTGTCGTCGGCAGACACGACAGGTAAC
CGCCCGTTGTTGTCTCCAGTAGACTATGTGCAATATTTGGCCGCTTGCAT
TTTGCCTTACTTTCCTTGTGCCGGCCCTTCGCCGCTCTGCCCTTCGCCGT
CTGTTGTGTTTTGTGCATCGCCGTCAACAACTCACGACCGATCGATCGAT
CGAGTAGCATCTCCCACTTCTTCTACAACGCGCTCGACGCGGCCCTGCCC
GGCACGGCGGCTATGACTGTCATCCAAAAGGTACCACACACATATTCTAT
CTACACAGGAGGGGTGGGGTTAGTAGGGGTGGATGCGTTTGGAAAAGAGG
AAGAAAAGAGGTACATACAGAAGTAAATATTCAGAAACTTGTCAGTCAAA
AGATGCCATGCATGCCCAAAAAGCTGGGGGTTCCGAGGTCACGAGGGGGG
GGGGCGAGGGGGGCTCTAGACCGGGCAAGATTTTGTAGCGCGCGTGAACG
TCGTCAAATTCACGACGGAAAGGTGGGTGTTGGTAATGAAGTATCGTGTG
CTTTGTGAAGTGAATGAACACGATATTTGTTTCCCACTTCGTGTCATCCG
AGCGGGCGAGAGAGTAAAAGAGAGAAAGAGCTTTACAGCATAAACGGGCG
GCGTTAACGCCTTTGGTGGCGCTTTTGCATCCGGCAACCACGACCGATGT
TCTCAAGCGCTTGCTTGTGTGTCTTTTTTCTGGCCGCCAAAGGCACTTTT
CGTCGCGGCGTTTTTAGCGCGGTCATGTGGGTAAAAGTAATCCCAGCGAA
AGTTTTTTTGTCATGTGTTGCGCTCAGATTCGAGACCAGTCTGGCAAGTA
TAGGTATCTACTTGGTAGGTACAACCTTTGATGTCGACCAGGTTTCTCTT
CTGGTTGGCCGCGGCCGGCTACCCTCGTCACTTCGTCATTTCCAACGATT
CTTGTTTACATGGTGTGGAAGCTTGAAACTCCATATTGTACAACCCGCGG
TTCGTACTCCCGCGGTGCGTTTGGCAGGTGGTGATTGACCAGGTCTTCTG
GGCGCCCATCTTCACCCTGATCTTCTTCACTTGGATCGGAGTCACGTCCG
GTAACTCCCCCAGCGAGATCGTCACCAAGGTCAAGAGCGACCTGGTCCAG
GGAGTGGTGGGCTCGTGGACGGTGTGGCCGCTGGCGCACACGATCAACTT
CAAGTTTGTGCCGACGGAGCAACGCCTGTTGTACATCAACTCCATCCAGA
TCTTCTACAACGTCTTCCTGTCGATCATTGGCTCCAAGTAAACACTTACA
TACCAGACCGCGGAGAGATTTGTGACTATTTAATCACTAACGATGCAGTT
AGATGTGCCTCTGTGCCGCGTTTTTTGTTGCGGTCAGGGGGGGGGCGGTA
GATTGAAAGAGCAGTGTGGAAAACACTGCTGTCCGCCGACGGACACATGC
GGGCGCCTTATTTATTTATCTTCGTTCTTTTTGAACAAGCGGGGGGCGTA
TGTACGTGCAAGCGAAGACAGCATCGACTCTAGTAAGTAATTCTACAGAA
TGGTGGAGGGACGGAGTTGTGTGCCCATCAAGCGCCTTTGGTTTCGCTGG
TGGTGCTTCTGTGCTCGCCCGCCATTGGACCCCCCATGGTTGCTGCGGCG
CGTACTCTAGTATTTAGTCGCCGCACGAAAGCAGCGGAACATATTCTCTG
GTCGTACATTGTCTCTGTTTTGAGAGGGAGTTTATCACCCACCGGAGATT
TGAGGAGGTCGATATTCTTAGAGGCGTTTTCGAAGAAATGACCGTTATGT
AGCGCAGCAGTGTGTACTACCGGTACTTTGTAACCGTTCCAGTCTCCGCC
AGCATTGGCAGTAAGGGTAAGGGGCGACGTGGTCGTGCTGCCCACACGCG
GACTGGCTTGTCCAACTGTCCATAGAATGAGGATACCTCTGATTGGTAAA
CACGATCCGGCGGAGAAATTTGCTGGAGCTTGTGTCTACACATCTTTTGC
CTAAATATGCAACCTACGATATAGACTTACAGGAGATGAACCGCGGAGTT
TGTTGAGTCCGGGTCTGCTTTTTGTTTCAAAAGCTGAAGGTGCAGCAGCG
CACCCGCAGGAAGAAAGAAAAAGAGTTGGATGTGCCCTGTCGAAGGCTTG
TTGCCGATTTTGGCTAGTTGCCTTCTGGTTTAAAAGTTTTTTTAAATAGT
CCTTGTAGATAACAGAACTAGTGCTCTTTAGAGACCCCTACTGCTAATTT
CAGACCACAACCGTTCACGATCACCCGGAGGAATCGTCCGTTGATTTTCT
TGCTGCTGCGTTGACGACGCCTCGAGCATGTTTCAACCGCGGGGGGGAAC
GAAGAGGGTGGAGAGGTGACAAGGAATGGTGTACTCTACAACCGCGGACG
GACGACAGCCACCTGCCGTGGCCACGCGGTGGAGAGTGAGGGAAACCCGT
CATCCTCCGAT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig195:5749..11859-

>mRNA_L-elsbetiae_contig195.5797.1 ID=mRNA_L-elsbetiae_contig195.5797.1|Name=mRNA_L-elsbetiae_contig195.5797.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1770bp|location=Sequence derived from alignment at L-elsbetiae_contig195:5749..11859- (Laminarionema elsbetiae ELsaHSoW15)
ATGGTGCGTTCTTCCGCTCTTCCCGCGGCCCTCGTGGTGCTAGCGTCGTC
CTCATGCACCGCCTTTGTCGCTCCTCTGGCGCCGGCCCGCGTCTCGACCG
CCCCGAGCATGTCGTTGAAGGGGCCAGCGGGACGCTCGTCTTCCCCCATC
AGCAAGGCCACGGGGATCGTCAGCAAGATGGTGCGTTCTTCCGCTCTTCC
CGCGGCCCTCGTGGTGCTAGCGTCGTCCTCATGCACCGCCTTTGTCGCTC
CTCTGGCGCCGGCCCGCGTCTCGACCGCCCCGAGCATGTCGTTGAAGGGG
CCAGCGGGACGCTCGTCTTCCCCCATCAGCAAGGCCACGGGGATCGTCAG
CAAGGCTCTTTTCGGCCGGCCTGGAAGCAAAGCGGGCAACAGCAACAACG
GTGACGGCGGTGGCATGATGGGCGGCGGCAACAACAACGGCGACAACGGG
CAGGGGTCCTTCGACGACAGCGAGGAGGACAGCAACAACGACGCGCTGGC
CATGCTGGGCGTGCTCGCCACTATTAAGGGCGGTGCGGGGGGCGCCTGGG
ACGCGTACAACGGGGCGTTGGCAGAAAAGCCGATTCTCGTCAAGGCTCTT
TTCGGCCGGCCTGGAAGCAAAGCGGGCAACAGCAACAACGGTGACGGCGG
TGGCATGATGGGCGGCGGCAACAACAACGGCGACAACGGGCAGGGGTCCT
TCGACGACAGCGAGGAGGACAGCAACAACGACGCGCTGGCCATGCTGGGC
GTGCTCGCCACTATTAAGGGCGGTGCGGGGGGCGCCTGGGACGCGTACAA
CGGGGCGTTGGCAGAAAAGCCGATTCTCGTCAAGGCTTGCACGTCACTGG
TGGGCTTCTCAATCGGCGATTTCCTGGCCCAGAAGGGCACCGCTAAGGAT
AAGGAAAAGTTCTCGTATGAGCGACTGGCCCGCATGGCCGCGTTCGGGTT
CTTGTTCCACGGGACGCTTGCACGTCACTGGTGGGCTTCTCAATCGGCGA
TTTCCTGGCCCAGAAGGGCACCGCTAAGGATAAGGAAAAGTTCTCGTATG
AGCGACTGGCCCGCATGGCCGCGTTCGGGTTCTTGTTCCACGGGACCATC
TCCCACTTCTTCTACAACGCGCTCGACGCGGCCCTGCCCGGCACGGCGGC
TATGACTGTCATCCAAAAGCATCTCCCACTTCTTCTACAACGCGCTCGAC
GCGGCCCTGCCCGGCACGGCGGCTATGACTGTCATCCAAAAGGTGGTGAT
TGACCAGGTCTTCTGGGCGCCCATCTTCACCCTGATCTTCTTCACTTGGA
TCGGAGTCACGTCCGGTAACTCCCCCAGCGAGATCGTCACCAAGGTCAAG
AGCGACCTGGTCCAGGGAGTGGTGGGCTCGTGGACGGTGTGGCCGCTGGC
GCACACGATCAACTTCAAGTTTGTGCCGACGGAGCAACGCCTGTTGTACA
TCAACTCCATCCAGATCTTCTACAACGTCTTCCTGTCGATCATTGGCTCC
AAGTAAGTGGTGATTGACCAGGTCTTCTGGGCGCCCATCTTCACCCTGAT
CTTCTTCACTTGGATCGGAGTCACGTCCGGTAACTCCCCCAGCGAGATCG
TCACCAAGGTCAAGAGCGACCTGGTCCAGGGAGTGGTGGGCTCGTGGACG
GTGTGGCCGCTGGCGCACACGATCAACTTCAAGTTTGTGCCGACGGAGCA
ACGCCTGTTGTACATCAACTCCATCCAGATCTTCTACAACGTCTTCCTGT
CGATCATTGGCTCCAAGTAA
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