mRNA_L-elsbetiae_contig19492.5793.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig19492.5793.1 vs. uniprot
Match: A0A6H5J9N5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9N5_9PHAE) HSP 1 Score: 239 bits (611), Expect = 1.070e-75 Identity = 128/259 (49.42%), Postives = 150/259 (57.92%), Query Frame = 1 Query: 1 YLIKWPFAVLLGIWSALFWRAPTTDDVIALVEGTSLTTLLHRGLPPSTSDASEQQPAAP------------------------------------------YTKTRPI---------------SSNSGDRGGEENKWQVHIRSFIVNGKKVADPASQLSFLHVYWSTGAHTKCHVLGNALAHRIYSDEFLKDKLMESTWVTTWLHDGLLNGTCGPVTHTRTAANKWMGLGFVTSRESLLAESRNMTALAGASHASTKHW 606 Y I+WP AVLLG+WSA FWRAPT DDV AL+EGTSL TLL GLPP T + E+QPA YTKTR I S + D + KW+V +SFIVNGK+V DPASQ+SFLHVY + +H KCHVLGN+L RIYSDE LKDKLMESTW TTWLH L+ GT GP+T+ RT NKWMG+G S +S++AE+ NMT L GA HA T W Sbjct: 6 YYIRWPLAVLLGVWSAFFWRAPTKDDVAALIEGTSLITLLRHGLPPGTDASEEEQPATSPMREERRYYIDVKTCLLEHVTRQPGSTYEEGVVFPIKFWSMSYTKTRSIGRSSXXXXXXXXXXRSGSDADTSHGKPKWEVRFQSFIVNGKEVTDPASQMSFLHVYLTCSSHAKCHVLGNSLVQRIYSDELLKDKLMESTWTTTWLHSALMEGTHGPLTYPRTTTNKWMGIGCPASHKSVVAETLNMTPLGGADHARTARW 264
BLAST of mRNA_L-elsbetiae_contig19492.5793.1 vs. uniprot
Match: A0A8K0F0A4_BRALA (Hypp5078 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8K0F0A4_BRALA) HSP 1 Score: 82.8 bits (203), Expect = 3.310e-15 Identity = 62/208 (29.81%), Postives = 98/208 (47.12%), Query Frame = 1 Query: 1 YLIKWPFAVLLGIWSALFWRAPTTDDVIALVEGTSLTTLLHRGLPP------STSDASEQQPAAPYTKTRPISSNSGDRGGEENKWQVHIRSFIVNGKKVADPASQLSFLHVYWSTGAHTKCHVLGNALAHRIYSDEFLKDKLMESTWVTTWLHDGLLNGTCGPVTHTRTAANKWMGLGFVTSRESLLAESRNMTALAGASHASTKHW 606 Y I+W +AVL ++ F RAPT D++ +E T++T L+ R + SD + K + +G G V I F NG V D + S ++ Y + HTK H+ N+L I ++ L ES++ + LH LL+ + + + +++G G RESL+ ESRNM+AL G H + +HW Sbjct: 39 YYIRWIYAVLYSLYLLFFLRAPTDRDIVGYIENTTMTMLIRRDGKTGECEVITVSDCKLRASGGYKLKNMSLRYKTGRNG-------VQILHFTRNGDDVTDRSQMFSTIYFYHTHSMHTKSHLFSNSLVRHIVDNDV--KTLQESSYTSMPLHYVLLHSSLSVLMWDGNMS-QYLGYGDACIRESLVEESRNMSALDG--HRAEEHW 234
BLAST of mRNA_L-elsbetiae_contig19492.5793.1 vs. uniprot
Match: C3Z144_BRAFL (Uncharacterized protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3Z144_BRAFL) HSP 1 Score: 82.4 bits (202), Expect = 4.590e-15 Identity = 63/205 (30.73%), Postives = 101/205 (49.27%), Query Frame = 1 Query: 1 YLIKWPFAVLLGIWSALFWRAPTTDDVIALVEGTSLTTLLHRGLPPSTSDASEQQPAAPYTKTRPISS---NSGDRGGEENKWQVHIRSFIVNGKKVADPASQLSFLHVYWSTGAHTKCHVLGNALAHRIYSDEFLKDKLMESTWVTTWLHDGLLNGTCGPVTHTRTAANKWMGLGFVTSRESLLAESRNMTALAGASHASTKHW 606 Y ++W +AV ++ +APT D+ VE TSL L+ P S + E + K R N+ ++ + V I F NG++++D + SF Y + +H KCH+ N+L I D LK L EST+ + LH GLL+ P+ ++ ++ +G V +RES++ ES+NM+A G H S + W Sbjct: 39 YFLRWLYAVFYSLYLLFVLKAPTDADMAWAVENTSLCMLIR---PASNGRSDEYEITVDDCKLRATGGFQLNNMSMRYKKGEDGVKILHFTRNGEEISDMSQIFSFWFFYGTLSSHAKCHLFSNSLVRHIV-DRDLKT-LQESTYTSIPLHYGLLHSPISPLQSDGNVSS-FLAVGVVGTRESVMKESKNMSAWEG--HQSGRRW 235
BLAST of mRNA_L-elsbetiae_contig19492.5793.1 vs. uniprot
Match: A0A6P4ZS20_BRABE (uncharacterized protein LOC109476046 n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4ZS20_BRABE) HSP 1 Score: 80.9 bits (198), Expect = 1.590e-14 Identity = 58/208 (27.88%), Postives = 99/208 (47.60%), Query Frame = 1 Query: 1 YLIKWPFAVLLGIWSALFWRAPTTDDVIALVEGTSLTTLLHRGLPPSTSDASEQQPAAPYTKTRPISSNSGDR------GGEENKWQVHIRSFIVNGKKVADPASQLSFLHVYWSTGAHTKCHVLGNALAHRIYSDEFLKDKLMESTWVTTWLHDGLLNGTCGPVTHTRTAANKWMGLGFVTSRESLLAESRNMTALAGASHASTKHW 606 Y I+W + L ++ RAPT D++ +E T++ L+ P + + E + Y K R ++ G R +++K V + F NG K+ + S + Y HTK H+ N L I ++ L EST+ + LH LL+ + + + ++++G G RES++ ESRNM+AL+G H + +HW Sbjct: 38 YFIRWIYVALYSLYLLFVMRAPTDRDIVGYIENTTMAMLIR---PATDGKSGEYEVTVKYCKLR---ASGGYRLKNMSLRYKKSKSDVRVLCFTRNGVKINNRCQIFSTIFFYHGHSLHTKSHLFSNGLVRHIVDNDI--KTLRESTYTSIPLHYALLHSSVSVLGNV----SRYLGYGSACIRESVVEESRNMSALSG--HQAMEHW 231
BLAST of mRNA_L-elsbetiae_contig19492.5793.1 vs. uniprot
Match: A0A8K0EY56_BRALA (Hypp5079 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8K0EY56_BRALA) HSP 1 Score: 79.0 bits (193), Expect = 2.670e-14 Identity = 60/209 (28.71%), Postives = 96/209 (45.93%), Query Frame = 1 Query: 1 YLIKWPFAVLLGIWSALFWRAPTTDDVIALVEGTSLTTLLHRGLPPST-------SDASEQQPAAPYTKTRPISSNSGDRGGEENKWQVHIRSFIVNGKKVADPASQLSFLHVYWSTGAHTKCHVLGNALAHRIYSDEFLKDKLMESTWVTTWLHDGLLNGTCGPVTHTRTAANKWMGLGFVTSRESLLAESRNMTALAGASHASTKHW 606 Y I+W +AVL ++ F RAPT D++ +E T++ L+ R T SD + K + +G G V I +F NG +V + + S ++ Y HTK H+ N+L I ++ L ES++ + LH LL+ + + + +++G G RES+L ESRNM+AL G H + W Sbjct: 39 YYIRWIYAVLYSLYLLFFLRAPTDSDIVGYIENTTMAMLIRRAADGKTGEYEVTVSDCKLRASGGYSLKNMSLRYKAGRNG-------VQILNFTRNGVEVGNRSEMFSTVYFYHIHSMHTKSHLFSNSLVRHIVDNDV--KTLQESSYTSIPLHYVLLHSSLSVLMWDGNMS-RYLGYGNACIRESILEESRNMSALEG--HRAEHRW 235
BLAST of mRNA_L-elsbetiae_contig19492.5793.1 vs. uniprot
Match: A0A8K0F328_BRALA (Hypp5079 protein n=2 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8K0F328_BRALA) HSP 1 Score: 79.0 bits (193), Expect = 7.970e-14 Identity = 60/209 (28.71%), Postives = 96/209 (45.93%), Query Frame = 1 Query: 1 YLIKWPFAVLLGIWSALFWRAPTTDDVIALVEGTSLTTLLHRGLPPST-------SDASEQQPAAPYTKTRPISSNSGDRGGEENKWQVHIRSFIVNGKKVADPASQLSFLHVYWSTGAHTKCHVLGNALAHRIYSDEFLKDKLMESTWVTTWLHDGLLNGTCGPVTHTRTAANKWMGLGFVTSRESLLAESRNMTALAGASHASTKHW 606 Y I+W +AVL ++ F RAPT D++ +E T++ L+ R T SD + K + +G G V I +F NG +V + + S ++ Y HTK H+ N+L I ++ L ES++ + LH LL+ + + + +++G G RES+L ESRNM+AL G H + W Sbjct: 39 YYIRWIYAVLYSLYLLFFLRAPTDSDIVGYIENTTMAMLIRRAADGKTGEYEVTVSDCKLRASGGYSLKNMSLRYKAGRNG-------VQILNFTRNGVEVGNRSEMFSTVYFYHIHSMHTKSHLFSNSLVRHIVDNDV--KTLQESSYTSIPLHYVLLHSSLSVLMWDGNMS-RYLGYGNACIRESILEESRNMSALEG--HRAEHRW 235
BLAST of mRNA_L-elsbetiae_contig19492.5793.1 vs. uniprot
Match: A0A6P5A8U5_BRABE (LOW QUALITY PROTEIN: uncharacterized protein LOC109483924 n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P5A8U5_BRABE) HSP 1 Score: 75.9 bits (185), Expect = 1.030e-12 Identity = 58/214 (27.10%), Postives = 101/214 (47.20%), Query Frame = 1 Query: 1 YLIKWPFAVLLGIWSALFWRAPTTDDVIALVEGTSLTTLLHRGLPPSTSDASEQQPAAPYTKTRPISS---NSGDRGGEENKWQVHIRSFIVNGKKVADPASQLSFLHVYWSTGAHTKCHVLGNALA---------HRIYSDEFLKDKLMESTWVTTWLHDGLLNGTCGPVTHTRTAANKWMGLGFVTSRESLLAESRNMTALAGASHASTKHW 606 YLI+W +A L ++ R PT D++ +E T++ L+ P + + E + K R + + + K V + F NG ++++ S ++ Y + HTK H+ N+L H +++D L ES++ + LH GLL+ + + + +++G G V +RESL+ ESRNM+ALA H + HW Sbjct: 38 YLIRWIYAALYSLYLLFVMRVPTDKDIVGYIENTTMGMLIR---PATDGKSGEYEVTVRDCKLRALGGYKLKNMSLRYTKGKIGVQVLCFTRNGVRISNRCQIFSTIYFYHTHSLHTKSHLFSNSLXXXXXXCLVRHIVHNDV---KTLQESSYTSIPLHYGLLHSSVSALAWDGNVS-RYLGYGHVGTRESLVEESRNMSALAR--HQAMDHW 242
BLAST of mRNA_L-elsbetiae_contig19492.5793.1 vs. uniprot
Match: A0A8K0EWD0_BRALA (Hypp4016 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8K0EWD0_BRALA) HSP 1 Score: 73.6 bits (179), Expect = 6.400e-12 Identity = 61/209 (29.19%), Postives = 97/209 (46.41%), Query Frame = 1 Query: 1 YLIKWPFAVLLGIWSALFWRAPTTDDVIALVEGTSLTTLLH---RGLPP----STSDASEQQPAAPYTKTRPISSNSGDRGGEENKWQVHIRSFIVNGKKVADPASQLSFLHVYWSTGAHTKCHVLGNALAHRIYSDEFLKDKLMESTWVTTWLHDGLLNGTCGPVTHTRTAANKWMGLGFVTSRESLLAESRNMTALAGASHASTKHW 606 Y I+W +AV ++ L R PT D++ VE T+L L+ G P + D + K+ ++ G+ G E I F NG ++ D + S + +Y HTK HV N +A I ++ L+ES++ + LH+ LL+ P+ T K +G +RES++ ESRNM+AL G H + + W Sbjct: 38 YFIRWIYAVFYSLYLLLVLRDPTDSDIVEYVENTTLAMLIRLARNGRPEEYDVTVGDCKLRASGGYKLKSWSLTYKKGNGGAE-------ILRFSRNGVEIGDRSQIFSTVFLYHVHSLHTKSHVFSNGVARHIVENDV--KTLLESSYTSMPLHNALLHSCQSPLEGT---VAKLLGYICPCTRESVVEESRNMSALKG--HQTKQCW 232
BLAST of mRNA_L-elsbetiae_contig19492.5793.1 vs. uniprot
Match: C3Z6P0_BRAFL (DUF3504 domain-containing protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3Z6P0_BRAFL) HSP 1 Score: 73.2 bits (178), Expect = 1.410e-11 Identity = 58/213 (27.23%), Postives = 97/213 (45.54%), Query Frame = 1 Query: 1 YLIKWPFAVLLGIWSALFWRAPTTDDVIALVEGTSLTTLLHRGLPPSTSDASEQQPAAPYT-----------KTRPISSNSGDRGGEENKWQVHIRSFIVNGKKVADPASQLSFLHVYWSTGAHTKCHVLGNALAHRIYSDEFLKDKLMESTWVTTWLHDGLLNGTCGPVTHTRTAANKWMGLGFVTSRESLLAESRNMTALAGASHASTKHW 606 Y I+W +AVL ++ RAPT D++ +E T++ L+ P+T S + Y K + +G G V + F NG +V+D + S +++Y HTK H+ N+L I ++ L ES++ + LH LL+ + V ++++G G RES++ ESRNM+A+ G H + W Sbjct: 35 YYIRWLYAVLYSLYLLFVLRAPTDTDIVGYIENTTMAMLIR----PATDGKSGEYEVTVYDCKLCASGGHKLKNMSLRYKTGKNG-------VQVLRFTRNGVEVSDRSQIFSTIYLYHIHSMHTKSHLFSNSLVRHIVDNDV--KALQESSYTSIPLHYVLLHSSLS-VLEWGGNMSRYLGYGDACIRESVVEESRNMSAMEG--HQAVHSW 231
BLAST of mRNA_L-elsbetiae_contig19492.5793.1 vs. uniprot
Match: UPI00160002B3 (uncharacterized protein LOC118410277 n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI00160002B3) HSP 1 Score: 69.7 bits (169), Expect = 1.460e-10 Identity = 52/202 (25.74%), Postives = 91/202 (45.05%), Query Frame = 1 Query: 1 YLIKWPFAVLLGIWSALFWRAPTTDDVIALVEGTSLTTLLHRGLPPSTSDASEQQPAAPYTKTRPISSNSGDRGGEENKWQVHIRSFIVNGKKVADPASQLSFLHVYWSTGAHTKCHVLGNALAHRIYSDEFLKDKLMESTWVTTWLHDGLLNGTCGPVTHTRTAANKWMGLGFVTSRESLLAESRNMTALAGASHASTKHW 606 Y I+W +A+L ++ R P D++ +E T++ L+ + + +R N+ + K V + +F NG V + S ++ Y HTK H+ N+L I ++ L ES++ + LH LL+ + V ++++G G V RES++ ESRNM+AL G H + + W Sbjct: 39 YYIRWIYAILYSLYLLFVLRTPKDRDIVGYIENTTMAMLIRPATDGKSGEYEVTVCDCKLRASRGYKLNNMSLRYKTGKNGVQVLNFTRNGVDVTNRCEIFSTIYFYHIYSMHTKSHLFSNSLVRHIVDNDV--HTLQESSYTSIPLHYELLHSSLS-VLEWGGNMSRYLGYGGVCIRESVVKESRNMSALEG--HQAVRRW 235 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19492.5793.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig19492.5793.1 >prot_L-elsbetiae_contig19492.5793.1 ID=prot_L-elsbetiae_contig19492.5793.1|Name=mRNA_L-elsbetiae_contig19492.5793.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=202bp YLIKWPFAVLLGIWSALFWRAPTTDDVIALVEGTSLTTLLHRGLPPSTSDback to top mRNA from alignment at L-elsbetiae_contig19492:619..1624- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig19492.5793.1 ID=mRNA_L-elsbetiae_contig19492.5793.1|Name=mRNA_L-elsbetiae_contig19492.5793.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1006bp|location=Sequence derived from alignment at L-elsbetiae_contig19492:619..1624- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig19492:619..1624- >mRNA_L-elsbetiae_contig19492.5793.1 ID=mRNA_L-elsbetiae_contig19492.5793.1|Name=mRNA_L-elsbetiae_contig19492.5793.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1212bp|location=Sequence derived from alignment at L-elsbetiae_contig19492:619..1624- (Laminarionema elsbetiae ELsaHSoW15)back to top |