mRNA_L-elsbetiae_contig1947.5784.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1947.5784.1 vs. uniprot
Match: A0A6H5K7W6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7W6_9PHAE) HSP 1 Score: 418 bits (1075), Expect = 3.010e-142 Identity = 219/369 (59.35%), Postives = 264/369 (71.54%), Query Frame = 1 Query: 31 WTKTRIDVLIVLEGPSDRATALTFRDIAETVQDGLHGLGHPSRIIYCTHIAYDDCVVARGKLIVLAAHNLASFFTAEGESAVLELNLLPPDAVLYNFEQVPRDLPRESFLPSAGQPGGPARDKSVVSSRTLQIYASFTLWDYSQENVKNLLDVGIHADLVPLGFSTKLGVS---LRNDQQGDHKGDEDIDVLFIGMETPTRKAAIRRLREAGISVVHPNSAGISLYGAEFDAMAARSKIVLSLNAFRNVADECSDGSGSXXXXXXXXXXXXXXXXXTSDASGAHCSTGEWKMPRLARLLANGRFVVSEMSGTAQERARFSGGLVFVDPGHLAETCRFYLQRPELRIAIAASGRQIFEQQLEGDILREPV 1128 W + RIDV++VLEGPSD+ TAL FRDIAETVQDGL LGHPSRI+YCT++ D C GK I+LA HNLAS+FT +G AVLE LLPPDAVLYNFEQ+P PRES + +PG RD+S+VS+RTL IY S+TLWDYS+EN + LLD+GIH D+VPLGFS+KL S + + + EDIDVLFIGMETPTR+ IRRLR+AGI+V HPNS G+ L+GA FD ++ARSKIVL+LNAF + + + G C GEWKMPRLARLLANGRF+VSEMSG+ ERA+FSGG+VF P LAETC+FYL RP LR++IA SGR++FEQ LE DILR PV Sbjct: 19 WVQQRIDVVVVLEGPSDQTTALVFRDIAETVQDGLQNLGHPSRIVYCTNLVTDHCFAKGGKFIILAPHNLASYFTGDGGLAVLEKKLLPPDAVLYNFEQIPCRWPREST--NLVEPG--TRDRSLVSARTLHIYGSYTLWDYSEENAERLLDMGIHTDVVPLGFSSKLRSSSLLVAGGRVLKEREYEDIDVLFIGMETPTRQRTIRRLRDAGITVFHPNSEGVDLFGAAFDTVSARSKIVLNLNAFEGATTTTIESRSN------------------GSSPGDLCDNGEWKMPRLARLLANGRFIVSEMSGSDSERAKFSGGVVFAPPERLAETCQFYLHRPGLRMSIAESGRRLFEQHLEADILRRPV 365
BLAST of mRNA_L-elsbetiae_contig1947.5784.1 vs. uniprot
Match: D7FJ49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ49_ECTSI) HSP 1 Score: 225 bits (574), Expect = 6.100e-69 Identity = 123/217 (56.68%), Postives = 147/217 (67.74%), Query Frame = 1 Query: 487 VGIHADLVPLGFSTKLGVSLRNDQQG---DHKGDEDIDVLFIGMETPTRKAAIRRLREAGISVVHPNSAGISLYGAEFDAMAARSKIVLSLNAFRNVADECSDGSGSXXXXXXXXXXXXXXXXXTSDASGAHCSTGEWKMPRLARLLANGRFVVSEMSGTAQERARFSGGLVFVDPGHLAETCRFYLQRPELRIAIAASGRQIFEQQLEGDILREPV 1128 + IHADLVPLGF++KL S G + + EDIDVLFIGMETPTR+ IRRLR+AGI V HPNS + L+GA FD ++ARSKIVL+LNAF + + + G C GEWKMPRLARLLANGRF+VSEMSG+ ERA+FSGG+VF P LAETC+FYLQRPELR++IA SGR++FEQ LE DILR PV Sbjct: 1 MSIHADLVPLGFASKLRSSSLLVAGGHVLEEQEHEDIDVLFIGMETPTRQRTIRRLRDAGIMVFHPNSERVDLFGAAFDTVSARSKIVLNLNAFEGATTTAIESRSN------------------GSSPGDLCDNGEWKMPRLARLLANGRFIVSEMSGSDSERAKFSGGVVFAPPERLAETCQFYLQRPELRMSIAQSGRRLFEQHLEADILRRPV 199
BLAST of mRNA_L-elsbetiae_contig1947.5784.1 vs. uniprot
Match: F0Y7U6_AURAN (EF-hand domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7U6_AURAN) HSP 1 Score: 143 bits (360), Expect = 1.840e-33 Identity = 124/393 (31.55%), Postives = 174/393 (44.27%), Query Frame = 1 Query: 52 VLIVLEGPSDRATALTFRDIAETVQDGLHGLGHPSRIIYCTHIAYDDCVVARG--KLIVLAAHNLASFFTAEGESAVLELNLLP----PDAVLYNFEQVPRDLPRESFLPSAGQPGGPARDK--------SVVSSRTLQIYA-SFTLWDYSQENVKNLLDVGIHADLVPLGFSTKLGVSLRNDQQGDHKGDEDIDVLFIGMETPTRKAAIRRLREA--GISVVHPNSAGISLYGAEFDAMAARSKIVLSLNAFRNVADECSDGSGSXXXXXXXXXXXXXXXXXTSDASGAHCSTGEWKMPRLARLLANGRFVVSEMSGTAQERAR---FSGGLVFVDPGHLAETCRFYLQRPELRIAIAASGRQIFEQQLEGDILREPVEIMLGQRENAQIKV 1170 V++ +GPSD +T+ TF DI+ V GL GLG +R C + D C A + + L AHNL ++ + ++ V+ P AVLYNFE VP D E+ Q AR S ++ TL++ + T+WDYS NV +L +GI A VPLG + + + VLF G T R A + +R G VVH N+A +GA DA A + +VL+L AF + DE WKMPRLA+L AN +FV+SE GT + ++GGLVF + L +Y RP R AIA G +F + +LR PV+ +L R + V Sbjct: 481 VVVYQQGPSDTSTSGTFADISAAVVAGLRGLGLAARAETCVALT-DGCRFALDGEQEVALGAHNLQAYVDVDADAPVVLGPRRPLFYDEAAVLYNFEYVPPD-DLETLAAGMAQLQNGARGDGGLTNAAGSFATAATLEVLRRANTVWDYSASNVPSLAALGISATHVPLGDAPPWRIRPALAAAVSANASSSLPVLFYGTLTRHRAATLAAIRAGPNGQPVVHANAATDGTFGAALDAQIAAADVVLNLRAFGDRDDE-------------------------------------WKMPRLAKLFANRKFVISE--GTCDPGGQCEAYAGGLVFAERRDLKAAVAYYRDRPAERAAIADRGHALFATRSMATVLRGPVQALLDGRRGQSMDV 832
BLAST of mRNA_L-elsbetiae_contig1947.5784.1 vs. uniprot
Match: A0A8J2S2T6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S2T6_9STRA) HSP 1 Score: 129 bits (323), Expect = 9.440e-29 Identity = 116/394 (29.44%), Postives = 176/394 (44.67%), Query Frame = 1 Query: 16 EPPTTWTKTRIDVLIVL--EGPSDRATALTFRDIAETVQDGLHGLGHPSRIIYCTHIAYDDCVVARGKLIVLAAHNLASFFTAEGESAVL--ELNLLPPDA--VLYNFEQVPRDLPRESFLPSAGQPGGPARDK-----SVVSSRTLQIYASFTLWDYSQENVKNLLDVGIHADLVPLGFSTKLGVSLRNDQQGDHKG------DEDIDVLFIGMETPTRKAAIRRLREAGISVVHPNSAGISLYGAEFDAMAARSKIVLSLNAFRNVADECSDGSGSXXXXXXXXXXXXXXXXXTSDASGAHCSTGEWKMPRLARLLANGRFVVSEMS-GTAQERARFSGGLVFVDPGHLAETCRFYLQRPELRIAIAASGRQIFEQQLEGDILREPVEIMLG 1143 E P + +T D+ +V+ +G D +T TF +I+ V GL LG +R+ +C + + I LA HNL F + ++ + LP + V +NFE VP + ++ Q ++ + V+ TL+ A +WDYS NV+ L + + VPLG+ST H+ D+DI +LF G T RK ++ LR + + H N+ + DA+ + IVL L AF + T EWKMPRLA+LLA G FVVSE + G + A ++ G+VF D L ET ++Y++RP R +AA G+ +FE + G +LR PVE L Sbjct: 236 ETPLSCAETCPDIAVVVYHQGEDDTSTRGTFFEISRAVVRGLRALGLRARLTHCVDASQGCAFRDHERRIHLATHNLQVFLDLATMAPLMLKRGDFLPRFSMDVAFNFEYVPNVINATEVAEASSQKTDHVQNAHGSFATAVALATLKKAAR--VWDYSLANVEPLSTL-TRVEHVPLGWSTAWR---------PHRDLSRLIQDKDIPILFYGTLTSRRKRTLQMLRSNDLPIFHANAQTDGTFAPALDALILSAAIVLDLKAFDST------------------------------------KTREWKMPRLAKLLAAGAFVVSEGACGVEHQCAAYAEGVVFTDD--LVETLQYYMERPVERARVAARGKALFEARTFGRVLRGPVERWLN 579
BLAST of mRNA_L-elsbetiae_contig1947.5784.1 vs. uniprot
Match: A0A7S2LV81_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LV81_9STRA) HSP 1 Score: 124 bits (312), Expect = 3.730e-28 Identity = 114/370 (30.81%), Postives = 169/370 (45.68%), Query Frame = 1 Query: 52 VLIVLEGPSDRATALTFRDIAETVQDGLH-------GLGHPSRIIYCTHIAYDDCVVARGK-LIVLAAHNLASFFTAEGESAVLELNLLPPD-AVLYNFEQVPRDLPRESFLPSAGQPGGPARDKSVVSSRTLQIYASFTL-----WDYSQENVKNLLDVGIHADLVPLGFSTKLGVSLRNDQQGDHKGDEDIDVLFIGMETPTRKAAIRRLREAGISVVHPNSAGISLYGAEFDAMAARSKIVLSLNAFRNVADECSDGSGSXXXXXXXXXXXXXXXXXTSDASGAHCSTGEWKMPRLARLLANGRFVVSEMSGTAQERARFSG-GLVFVDPGHLAETCRFYLQRPELRIAIAASGRQIFEQQLEGDIL 1116 VL + EGP D T F DI + DG+ G+ +I T C ++ + L+VL AH++ S +T++ + + L+ + P + LYNFE + G A + Q+Y ++L WDYS+ N + + G +A +PLGF L S ND GD +DIDVLF G R+ + LR+ G++V H N A +YG + +++ RSKIV++L F DE S+ SG EWKM R R LANG ++SE G+ QE A + G G++FV LA T ++YL+ AIA G+ F+ E DI+ Sbjct: 108 VLTIKEGPWDDNTEGVFADIKLMLVDGIRNAMAKYAGITDNRTVISSTCEDLRFCKLSGPRFLVVLGAHHI-SRYTSDNKISSLKSDFPPKERTALYNFEYI----------------DGQADFDRSQQTHMWQVYDHYSLSRHGIWDYSRSNFEQTVKEGYNAKYLPLGFVESLTWS--ND--GDFPP-KDIDVLFYGSLNAYRQNTLENLRKEGVAVRHAN-AQHDIYGEKLNSLIQRSKIVVNLRYF----DENSEVSG------------------------------EWKMARFLRPLANGILIISERCGSTQEMALWEGKGIIFVPRDDLANTIKYYLEHSGEADAIAREGKNAFQTHREEDII 420
BLAST of mRNA_L-elsbetiae_contig1947.5784.1 vs. uniprot
Match: A0A7S2LSU5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LSU5_9STRA) HSP 1 Score: 124 bits (312), Expect = 3.030e-27 Identity = 114/370 (30.81%), Postives = 169/370 (45.68%), Query Frame = 1 Query: 52 VLIVLEGPSDRATALTFRDIAETVQDGLH-------GLGHPSRIIYCTHIAYDDCVVARGK-LIVLAAHNLASFFTAEGESAVLELNLLPPD-AVLYNFEQVPRDLPRESFLPSAGQPGGPARDKSVVSSRTLQIYASFTL-----WDYSQENVKNLLDVGIHADLVPLGFSTKLGVSLRNDQQGDHKGDEDIDVLFIGMETPTRKAAIRRLREAGISVVHPNSAGISLYGAEFDAMAARSKIVLSLNAFRNVADECSDGSGSXXXXXXXXXXXXXXXXXTSDASGAHCSTGEWKMPRLARLLANGRFVVSEMSGTAQERARFSG-GLVFVDPGHLAETCRFYLQRPELRIAIAASGRQIFEQQLEGDIL 1116 VL + EGP D T F DI + DG+ G+ +I T C ++ + L+VL AH++ S +T++ + + L+ + P + LYNFE + G A + Q+Y ++L WDYS+ N + + G +A +PLGF L S ND GD +DIDVLF G R+ + LR+ G++V H N A +YG + +++ RSKIV++L F DE S+ SG EWKM R R LANG ++SE G+ QE A + G G++FV LA T ++YL+ AIA G+ F+ E DI+ Sbjct: 783 VLTIKEGPWDDNTEGVFADIKLMLVDGIRNAMAKYAGITDNRTVISSTCEDLRFCKLSGPRFLVVLGAHHI-SRYTSDNKISSLKSDFPPKERTALYNFEYI----------------DGQADFDRSQQTHMWQVYDHYSLSRHGIWDYSRSNFEQTVKEGYNAKYLPLGFVESLTWS--ND--GDFPP-KDIDVLFYGSLNAYRQNTLENLRKEGVAVRHAN-AQHDIYGEKLNSLIQRSKIVVNLRYF----DENSEVSG------------------------------EWKMARFLRPLANGILIISERCGSTQEMALWEGKGIIFVPRDDLANTIKYYLEHSGEADAIAREGKNAFQTHREEDII 1095
BLAST of mRNA_L-elsbetiae_contig1947.5784.1 vs. uniprot
Match: UPI001BD69488 (hypothetical protein n=1 Tax=Caballeronia sp. dw_19 TaxID=2719791 RepID=UPI001BD69488) HSP 1 Score: 94.0 bits (232), Expect = 1.290e-18 Identity = 70/242 (28.93%), Postives = 108/242 (44.63%), Query Frame = 1 Query: 58 IVLEGPSDRATALTFRDIAETVQDGLHGLGHPSRIIYCTHIAYDDCVVARGKLIVLAAHNLASFFTAEGESAVLELNLLP-------PDAVLYNFEQVPRDLPRESFLPSAGQPGGPARDKSVVSSRTLQIYASFTLWDYSQENVKNLLDVGIHAD-LVPLGFSTKLGVSLRNDQQGDHKGDEDIDVLFIGMETPTRKAAIRRLREAGISVVHPNSAGISLYGAEFDAMAARSKIVLSLNAF 759 + + P + F +IAET GL LGH DCV+ + H VL NLLP PDA+LYN EQV S +S ++++ +WDYS++NV L ++G+H LVP+G++++L +R + DIDVLF G P R+A I ++R G+ V A +YG E DA+ R+++VL+++ + Sbjct: 5 VTVISPPGYIHSAAFHEIAETFYYGLRSLGH-------------DCVLTAESQLAGRQH------------IVLGSNLLPTFPQPFAPDAILYNLEQV-------------------QHGSSWISPALIELFRRHVVWDYSEQNVTRLAELGVHVSRLVPIGYASELTRIVR-------AAEPDIDVLFFGSMGPRRQAVIDQMRRVGLKV----EAVFGVYGQERDALIGRARLVLNVHHY 191
BLAST of mRNA_L-elsbetiae_contig1947.5784.1 vs. uniprot
Match: UPI00146FA254 (class I SAM-dependent methyltransferase n=1 Tax=Chitinimonas koreensis TaxID=356302 RepID=UPI00146FA254) HSP 1 Score: 92.8 bits (229), Expect = 8.430e-17 Identity = 92/340 (27.06%), Postives = 135/340 (39.71%), Query Frame = 1 Query: 58 IVLEGPSDRATALTFRDIAETVQDGLHGLGHPSRIIYCTHIAYDDCVVARGKLIVLAAHNLASFFTAEGESAVLELNLLPPDAVLYNFEQVPRDLPRESFLPSAGQPGGPARDKSVVSSRTLQIYASFTLWDYSQENVKNLLDVGIHADLVPLGFSTKLGVSLRNDQQGDHKGDEDIDVLFIGMETPTRKAAIRRLREAGISVVHPNSAGISLYGAEFDAMAARSKIVLSLNAFRNVADECSDGSGSXXXXXXXXXXXXXXXXXTSDASGAHCSTGEWKMPRLARLLANGRFVVSEMSGTAQERARFSGGLVFVDPGHLAETCRFYLQRPELRIAIAASG 1077 IVL P A FR+IAET+ GL LG + I+ + G+ ++ NL + + LPP+ ++YN EQ+ +V+ L +WDYS+ N+ L GI A +P+ ++ +L D+Q D+DIDVLF G P R+A + LR AG +V +A +YGAE DA+ ARS++VL N RN A +++ R++ LLANG VV+E + A GL L E C L+ R A+ G Sbjct: 12 IVLLAPPGYAHVAAFREIAETLHHGLRRLGEDAPIVLNR--------IDPGRRPIVLGANLLPYLP--------QAPWLPPETIVYNLEQL-------------------IDGSHLVNDALLAALRRHEVWDYSERNIAWLAQRGIAARRLPIAYAPELSRIAPADEQ-----DKDIDVLFYGSLNPRREAVLNALRAAGATV----AALFGVYGAERDALIARSRLVL--NVHRNDARV-------------------------------------FELVRVSYLLANGCAVVAEGDAETELAADLREGLALAPYDGLVERCLALLRDEAGRAALGRRG 268
BLAST of mRNA_L-elsbetiae_contig1947.5784.1 vs. uniprot
Match: A0A8J2X102_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X102_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 6.440e-15 Identity = 85/293 (29.01%), Postives = 126/293 (43.00%), Query Frame = 1 Query: 217 IVLAAHNLASFFTAEGESAVL--ELNLLPPDA--VLYNFEQVPRDLPRESFLPSAGQPGGPARDK-----SVVSSRTLQIYASFTLWDYSQENVKNLLDVGIHADLVPLGFSTKLGVSLRNDQQGDHKG------DEDIDVLFIGMETPTRKAAIRRLREAGISVVHPNSAGISLYGAEFDAMAARSKIVLSLNAFRNVADECSDGSGSXXXXXXXXXXXXXXXXXTSDASGAHCSTGEWKMPRLARLLANGRFVVSEMS-GTAQERARFSGGLVFVDPGHLAETCRFYLQRP 1047 I LA HNL F + ++ + LP + V +NFE VP + ++ Q ++ + V+ TL+ A +WDYS NV+ L + + VPLG+ST H+ D+DI +LF G T RK ++ LR + + H N+ + DA+ + IVL L AF + T EWKMPRLA+LLA G FVVSE + G + A ++ G+VF D L ET ++Y++RP Sbjct: 255 IHLATHNLQVFLDLATMAPLMLKRGDFLPRFSMDVAFNFEYVPNVINATEVAEASSQKTDHVQNAHGSFATAVALATLKKAAR--VWDYSLANVEPLSTL-TRVEHVPLGWSTAWR---------PHRDLSRLIQDKDIPILFYGTLTSRRKRTLQMLRSNDLPIFHANAQTDGTFAPALDALILSAAIVLDLKAFDST------------------------------------KTREWKMPRLAKLLAAGAFVVSEGACGVEHQCAAYAEGVVFTDD--LVETLQYYMERP 497
BLAST of mRNA_L-elsbetiae_contig1947.5784.1 vs. uniprot
Match: A0A7K0D9N2_9NOCA (Uncharacterized protein n=1 Tax=Nocardia macrotermitis TaxID=2585198 RepID=A0A7K0D9N2_9NOCA) HSP 1 Score: 80.5 bits (197), Expect = 2.110e-13 Identity = 67/223 (30.04%), Postives = 96/223 (43.05%), Query Frame = 1 Query: 88 TALTFRDIAETVQDGLHGLGHPSRIIYCTHIAYDDCVVARGKLIVLAAHNLASFFTAEGESAVLELNLLPPDAVLYNFEQVPRDLPRESFLPSAGQPGGPARDKSVVSSRTLQIYASFTLWDYSQENVKNLLDVGIHADLVPLGFSTKLGVSLRNDQQGDHKGDEDIDVLFIGMETPTRKAAIRRLREAGISVVHPNSAGISLYGAEFDAMAARSKIVLSLNA 756 T+ F D+ V L LGH + C G + VL H LA P +V+Y EQV R +V L+ + +WDYS+ NV+ L +G+ A VP+G L Q+ ++DIDVLF G+ P R+ LR AG+ +VH N+ +YGAE DA+ ARSK+VL+L++ Sbjct: 13 TSPAFDDVMIAVSAALRDLGHST---------VSSCAPQPGHIDVLFGHYLAP-------------QRFPDASVVYQLEQVCEHGLRHG----------------LVQVNALRRHV---VWDYSRANVEYLRTLGVQAHYVPIGHHPAL-------QRVRAAPEQDIDVLFYGVGGPRRELVFGELRRAGLHMVHANA----VYGAELDALIARSKVVLNLHS 183 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1947.5784.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1947.5784.1 >prot_L-elsbetiae_contig1947.5784.1 ID=prot_L-elsbetiae_contig1947.5784.1|Name=mRNA_L-elsbetiae_contig1947.5784.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=395bp RRHTNEPPTTWTKTRIDVLIVLEGPSDRATALTFRDIAETVQDGLHGLGHback to top mRNA from alignment at L-elsbetiae_contig1947:14946..17149+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1947.5784.1 ID=mRNA_L-elsbetiae_contig1947.5784.1|Name=mRNA_L-elsbetiae_contig1947.5784.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2204bp|location=Sequence derived from alignment at L-elsbetiae_contig1947:14946..17149+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1947:14946..17149+ >mRNA_L-elsbetiae_contig1947.5784.1 ID=mRNA_L-elsbetiae_contig1947.5784.1|Name=mRNA_L-elsbetiae_contig1947.5784.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2370bp|location=Sequence derived from alignment at L-elsbetiae_contig1947:14946..17149+ (Laminarionema elsbetiae ELsaHSoW15)back to top |