mRNA_L-elsbetiae_contig19403.5755.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig19403.5755.1 vs. uniprot
Match: D7FSZ0_ECTSI (PPM-type phosphatase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSZ0_ECTSI) HSP 1 Score: 167 bits (424), Expect = 8.000e-49 Identity = 90/130 (69.23%), Postives = 96/130 (73.85%), Query Frame = 2 Query: 2 ADSSVDTSLSGTTLVSVCVRGSKLVLTNVGDSRATLGRRRAAAGGXXXXXXXXXXXXXXXXXXXXXXXXKKGGSLVAQALTEDHKPDIPVEKERILRAGGRVFAIEYSDGVDGPPRVWLKDVDVPGLAMS 391 ADSS+DTS+SGTTLVSVCVRG+KL+LTNVGDSRATLGRRR G GGSLVAQALTEDHKPDIP EKERI+RAGGRVF+IEYSDGVDGPPRVWL D D PGLAMS Sbjct: 93 ADSSIDTSMSGTTLVSVCVRGTKLILTNVGDSRATLGRRRLRGEGGSANDG--------------------GGSLVAQALTEDHKPDIPAEKERIVRAGGRVFSIEYSDGVDGPPRVWLADKDTPGLAMS 202
BLAST of mRNA_L-elsbetiae_contig19403.5755.1 vs. uniprot
Match: A0A835ZAZ3_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAZ3_9STRA) HSP 1 Score: 125 bits (315), Expect = 4.020e-32 Identity = 67/130 (51.54%), Postives = 81/130 (62.31%), Query Frame = 2 Query: 2 ADSSVDTSLSGTTLVSVCVRGSKLVLTNVGDSRATLGRRRAAAGGXXXXXXXXXXXXXXXXXXXXXXXXKKGGSLVAQALTEDHKPDIPVEKERILRAGGRVFAIEYSDGVDGPPRVWLKDVDVPGLAMS 391 AD SVDT SG+TLV+ C+RGS + + NVGDSRA LG ++ GG+LVA+ L+ DHKPD E+ERIL AGGRVFA+EY DG+DGPPRVWL +DVPGLAMS Sbjct: 183 ADHSVDTDFSGSTLVAACIRGSSITVANVGDSRAVLGIQQVP-----------------------------GGALVAEPLSVDHKPDAEAERERILAAGGRVFAVEYEDGLDGPPRVWLGHMDVPGLAMS 283
BLAST of mRNA_L-elsbetiae_contig19403.5755.1 vs. uniprot
Match: B8BV57_THAPS (PPM-type phosphatase domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BV57_THAPS) HSP 1 Score: 113 bits (282), Expect = 5.890e-29 Identity = 61/126 (48.41%), Postives = 70/126 (55.56%), Query Frame = 2 Query: 14 VDTSLSGTTLVSVCVRGSKLVLTNVGDSRATLGRRRAAAGGXXXXXXXXXXXXXXXXXXXXXXXXKKGGSLVAQALTEDHKPDIPVEKERILRAGGRVFAIEYSDGVDGPPRVWLKDVDVPGLAMS 391 +DT SGTTL +RG+KL N+GDSR LG GG L A+ T DHKPD P EKERI+ AGGRVFA+EY DG+DGPPRVWL +DVPGLAMS Sbjct: 1 IDTEFSGTTLSMAIIRGNKLTGVNIGDSRVILGLESG------------------------------GGKLEAEEFTHDHKPDSPGEKERIIAAGGRVFAVEYDDGIDGPPRVWLGHMDVPGLAMS 96
BLAST of mRNA_L-elsbetiae_contig19403.5755.1 vs. uniprot
Match: F0XW26_AURAN (PPM-type phosphatase domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XW26_AURAN) HSP 1 Score: 110 bits (276), Expect = 8.800e-28 Identity = 61/126 (48.41%), Postives = 74/126 (58.73%), Query Frame = 2 Query: 14 VDTSLSGTTLVSVCVRGSKLVLTNVGDSRATLGRRRAAAGGXXXXXXXXXXXXXXXXXXXXXXXXKKGGSLVAQALTEDHKPDIPVEKERILRAGGRVFAIEYSDGVDGPPRVWLKDVDVPGLAMS 391 VDT SG+T V +RG L+++NVGDSR TLG + G++VA+ ++ DHKPD P EK RIL AGGRVFA+EY DGVDGPPRVWL +DVPGLAMS Sbjct: 58 VDTEFSGSTYVFAALRGGALLVSNVGDSRVTLG-------------------------------VEVDGAIVARPVSIDHKPDAPAEKARILGAGGRVFAVEYDDGVDGPPRVWLGHMDVPGLAMS 152
BLAST of mRNA_L-elsbetiae_contig19403.5755.1 vs. uniprot
Match: A0A7S1FYJ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FYJ8_9STRA) HSP 1 Score: 111 bits (277), Expect = 8.640e-27 Identity = 61/126 (48.41%), Postives = 73/126 (57.94%), Query Frame = 2 Query: 14 VDTSLSGTTLVSVCVRGSKLVLTNVGDSRATLGRRRAAAGGXXXXXXXXXXXXXXXXXXXXXXXXKKGGSLVAQALTEDHKPDIPVEKERILRAGGRVFAIEYSDGVDGPPRVWLKDVDVPGLAMS 391 ++T+ SGTTL V VRG + N+GDSRA +G+ AG G A+ T DHKPD P EKERIL AGGRVFA+EY DG+DGPPRVWL ++DVPGLAMS Sbjct: 166 INTNFSGTTLTMVIVRGDHITGVNIGDSRAVIGK----AG--------------------------PDGKFYAEEFTHDHKPDSPGEKERILAAGGRVFAVEYDDGIDGPPRVWLAEMDVPGLAMS 261
BLAST of mRNA_L-elsbetiae_contig19403.5755.1 vs. uniprot
Match: A0A7S0BX79_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BX79_9STRA) HSP 1 Score: 110 bits (276), Expect = 1.140e-26 Identity = 58/126 (46.03%), Postives = 72/126 (57.14%), Query Frame = 2 Query: 14 VDTSLSGTTLVSVCVRGSKLVLTNVGDSRATLGRRRAAAGGXXXXXXXXXXXXXXXXXXXXXXXXKKGGSLVAQALTEDHKPDIPVEKERILRAGGRVFAIEYSDGVDGPPRVWLKDVDVPGLAMS 391 +DT SGTTL +RGS++ N+GDSR +G+ G ++A+ LT DHKPD P EKERIL +GGRVFA+EY DG+DGPPRVWL +DVPGLAMS Sbjct: 156 IDTEFSGTTLSMAVIRGSRIYGVNIGDSRVIIGKDDGT------------------------------GKIIAEDLTFDHKPDCPEEKERILASGGRVFAVEYDDGIDGPPRVWLGHMDVPGLAMS 251
BLAST of mRNA_L-elsbetiae_contig19403.5755.1 vs. uniprot
Match: B7FSA5_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FSA5_PHATC) HSP 1 Score: 108 bits (269), Expect = 3.870e-26 Identity = 57/126 (45.24%), Postives = 69/126 (54.76%), Query Frame = 2 Query: 14 VDTSLSGTTLVSVCVRGSKLVLTNVGDSRATLGRRRAAAGGXXXXXXXXXXXXXXXXXXXXXXXXKKGGSLVAQALTEDHKPDIPVEKERILRAGGRVFAIEYSDGVDGPPRVWLKDVDVPGLAMS 391 +D+ SGTTL +RG+ L N+GDSR LG+ G+ AQ +T DHKPD P EKERIL GGRVFA+EY DG+DGPPRVWL +D+PGLAMS Sbjct: 91 IDSEFSGTTLSMAIIRGNHLTGVNIGDSRVILGKEETP------------------------------GNFTAQDITFDHKPDSPAEKERILGCGGRVFAVEYDDGIDGPPRVWLGHMDIPGLAMS 186
BLAST of mRNA_L-elsbetiae_contig19403.5755.1 vs. uniprot
Match: A0A7R9UEX3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEX3_9STRA) HSP 1 Score: 109 bits (272), Expect = 6.670e-26 Identity = 59/130 (45.38%), Postives = 75/130 (57.69%), Query Frame = 2 Query: 2 ADSSVDTSLSGTTLVSVCVRGSKLVLTNVGDSRATLGRRRAAAGGXXXXXXXXXXXXXXXXXXXXXXXXKKGGSLVAQALTEDHKPDIPVEKERILRAGGRVFAIEYSDGVDGPPRVWLKDVDVPGLAMS 391 AD +D SGTTLV +RG+ L + NVGDSR T+G R+ + L A+ ++ DHKPD+P EKERI R GGRVFA++Y DG+DGP RVWL D+D+PGLAMS Sbjct: 176 ADPGIDCEFSGTTLVMGIIRGNTLTVANVGDSRLTMGVRQEGS-----------------------------DKLNAEPVSLDHKPDLPSEKERIERIGGRVFAVKYDDGIDGPARVWLADMDIPGLAMS 276
BLAST of mRNA_L-elsbetiae_contig19403.5755.1 vs. uniprot
Match: A0A812TV61_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812TV61_SYMMI) HSP 1 Score: 107 bits (266), Expect = 2.460e-25 Identity = 57/129 (44.19%), Postives = 70/129 (54.26%), Query Frame = 2 Query: 5 DSSVDTSLSGTTLVSVCVRGSKLVLTNVGDSRATLGRRRAAAGGXXXXXXXXXXXXXXXXXXXXXXXXKKGGSLVAQALTEDHKPDIPVEKERILRAGGRVFAIEYSDGVDGPPRVWLKDVDVPGLAMS 391 D +++T SGTT +RG+ N+GDSR+T+G R + G + ALT DHKPD+P EK RI GGRVFA+EY DGVDGPPRVWL +DVPGLAMS Sbjct: 130 DMAIETDFSGTTFTCCVIRGNTCTCANIGDSRSTIGYRNDS------------------------------GGITGIALTADHKPDLPAEKARIEAKGGRVFAVEYDDGVDGPPRVWLGHMDVPGLAMS 228
BLAST of mRNA_L-elsbetiae_contig19403.5755.1 vs. uniprot
Match: A0A7S2CUC4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CUC4_9STRA) HSP 1 Score: 103 bits (257), Expect = 3.900e-25 Identity = 57/121 (47.11%), Postives = 70/121 (57.85%), Query Frame = 2 Query: 29 SGTTLVSVCVRGSKLVLTNVGDSRATLGRRRAAAGGXXXXXXXXXXXXXXXXXXXXXXXXKKGGSLVAQALTEDHKPDIPVEKERILRAGGRVFAIEYSDGVDGPPRVWLKDVDVPGLAMS 391 SGTT V V +RG++L NVGDSR T G R + GS V + +TED KPD P EKERIL AGGRVFA++Y DG+DGP RVWL ++D+PGLAM+ Sbjct: 6 SGTTFVCVLIRGNELWSGNVGDSRCTAGDRA------------------------------EDGSYVFRTITEDQKPDSPGEKERILAAGGRVFAVQYDDGIDGPQRVWLGNMDIPGLAMA 96 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19403.5755.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig19403.5755.1 >prot_L-elsbetiae_contig19403.5755.1 ID=prot_L-elsbetiae_contig19403.5755.1|Name=mRNA_L-elsbetiae_contig19403.5755.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=131bp SRLLRGHFFERHDASVGVREGEQARAYQRRRLSSHPGQAARGGGGGRRRQback to top mRNA from alignment at L-elsbetiae_contig19403:1369..2536- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig19403.5755.1 ID=mRNA_L-elsbetiae_contig19403.5755.1|Name=mRNA_L-elsbetiae_contig19403.5755.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1168bp|location=Sequence derived from alignment at L-elsbetiae_contig19403:1369..2536- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig19403:1369..2536- >mRNA_L-elsbetiae_contig19403.5755.1 ID=mRNA_L-elsbetiae_contig19403.5755.1|Name=mRNA_L-elsbetiae_contig19403.5755.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=786bp|location=Sequence derived from alignment at L-elsbetiae_contig19403:1369..2536- (Laminarionema elsbetiae ELsaHSoW15)back to top |