mRNA_L-elsbetiae_contig194.5749.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig194.5749.1 vs. uniprot
Match: D7G218_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G218_ECTSI) HSP 1 Score: 87.8 bits (216), Expect = 9.650e-19 Identity = 39/64 (60.94%), Postives = 53/64 (82.81%), Query Frame = 1 Query: 1 MRNSSVALTASMKRLHGDDAILVVRNTVTGHGRTDERMFDGPVDIDTAKKIVAQGAPLWGWA*F 192 M+++S +LT+SM+RLHGD+AILVVRNTV GHG + +RMF GPVD+DTA +VA+G P++ W F Sbjct: 105 MKSASESLTSSMRRLHGDNAILVVRNTVPGHGESFDRMFGGPVDLDTALDLVAKGPPMYKWTTF 168
BLAST of mRNA_L-elsbetiae_contig194.5749.1 vs. uniprot
Match: A0A6H5J7J3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7J3_9PHAE) HSP 1 Score: 87.8 bits (216), Expect = 8.610e-18 Identity = 40/64 (62.50%), Postives = 51/64 (79.69%), Query Frame = 1 Query: 1 MRNSSVALTASMKRLHGDDAILVVRNTVTGHGRTDERMFDGPVDIDTAKKIVAQGAPLWGWA*F 192 M+N+S +LT SM+RLHGD+AILVVRNTV GHG + +RMF GPVD+DTA +VA+G P + W F Sbjct: 323 MKNASESLTTSMRRLHGDNAILVVRNTVPGHGESFDRMFGGPVDLDTALDLVAKGPPRYKWTTF 386
BLAST of mRNA_L-elsbetiae_contig194.5749.1 vs. uniprot
Match: A0A6H5K9U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9U7_9PHAE) HSP 1 Score: 79.0 bits (193), Expect = 2.740e-16 Identity = 40/71 (56.34%), Postives = 48/71 (67.61%), Query Frame = 1 Query: 1 MRNSSVALTASMKRLHGDDAILVVRNTVTGHGRT-DERMFDGPVDIDTAKKIVAQGAPLWGWA*FLTHTQI 210 M +S +TASMKRLHGDDA+L+VRNT GHG T ER FDGPVD+DTA +VA G + W F + I Sbjct: 1 METASKEITASMKRLHGDDALLIVRNTPPGHGVTCTERTFDGPVDVDTAIDLVASGPHQYQWGRFPEYNAI 71
BLAST of mRNA_L-elsbetiae_contig194.5749.1 vs. uniprot
Match: D7FL53_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL53_ECTSI) HSP 1 Score: 82.0 bits (201), Expect = 7.220e-16 Identity = 39/64 (60.94%), Postives = 45/64 (70.31%), Query Frame = 1 Query: 1 MRNSSVALTASMKRLHGDDAILVVRNTVTGHGRTDERMFDGPVDIDTAKKIVAQGAPLWGWA*F 192 M +S LTASMKRLHGDDA+L+VRNT GHG ER FDGPVD+DTA +VA G + W F Sbjct: 244 MGTASKELTASMKRLHGDDALLIVRNTPPGHGGCSERTFDGPVDVDTALDLVASGPHQYQWGRF 307
BLAST of mRNA_L-elsbetiae_contig194.5749.1 vs. uniprot
Match: A0A6H5JU41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU41_9PHAE) HSP 1 Score: 80.1 bits (196), Expect = 4.300e-15 Identity = 39/71 (54.93%), Postives = 52/71 (73.24%), Query Frame = 1 Query: 1 MRNSSVALTASMKRLHGDDAILVVRNTVTGHGRT-------DERMFDGPVDIDTAKKIVAQGAPLWGWA*F 192 M+N+S LT+SM+RLHGD+AILVVRNTV GHG + +E+MF GPVD+DTA +V +G P + W+ F Sbjct: 281 MKNASEILTSSMRRLHGDNAILVVRNTVPGHGESYERWETAEEKMFSGPVDVDTALDLVEKGRPGYLWSTF 351
BLAST of mRNA_L-elsbetiae_contig194.5749.1 vs. uniprot
Match: A0A6H5JZZ9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ9_9PHAE) HSP 1 Score: 79.3 bits (194), Expect = 6.880e-15 Identity = 40/71 (56.34%), Postives = 48/71 (67.61%), Query Frame = 1 Query: 1 MRNSSVALTASMKRLHGDDAILVVRNTVTGHGRT-DERMFDGPVDIDTAKKIVAQGAPLWGWA*FLTHTQI 210 M +S +TASMKRLHGDDA+L+VRNT GHG T ER FDGPVD+DTA +VA G + W F + I Sbjct: 245 METASKKMTASMKRLHGDDALLIVRNTPPGHGVTCTERTFDGPVDVDTALDLVASGPHQYQWGRFPKYNAI 315
BLAST of mRNA_L-elsbetiae_contig194.5749.1 vs. uniprot
Match: A0A6H5J9Y7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9Y7_9PHAE) HSP 1 Score: 78.2 bits (191), Expect = 1.140e-14 Identity = 35/61 (57.38%), Postives = 48/61 (78.69%), Query Frame = 1 Query: 1 MRNSSVALTASMKRLHGDDAILVVRNTVTGHGRTDERMFDGPVDIDTAKKIVAQGAPLWGW 183 ++ ++ +LTASM+RLHGD AILVVRNTV GHG + +RMF GPV++DTA +V +G P + W Sbjct: 182 IKTAAESLTASMRRLHGDSAILVVRNTVPGHGESFDRMFTGPVNLDTALDLVEKGPPEFEW 242
BLAST of mRNA_L-elsbetiae_contig194.5749.1 vs. uniprot
Match: D7FL51_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL51_ECTSI) HSP 1 Score: 78.6 bits (192), Expect = 1.220e-14 Identity = 40/71 (56.34%), Postives = 47/71 (66.20%), Query Frame = 1 Query: 1 MRNSSVALTASMKRLHGDDAILVVRNTVTGHGRT-DERMFDGPVDIDTAKKIVAQGAPLWGWA*FLTHTQI 210 M +S LT SMKRLHGDDA+L+VRNT GHG T ER FDGPVD+DTA +VA G + W F + I Sbjct: 232 METASKELTVSMKRLHGDDALLIVRNTPPGHGVTCTERTFDGPVDVDTALDLVASGPHQYQWGRFPEYNAI 302
BLAST of mRNA_L-elsbetiae_contig194.5749.1 vs. uniprot
Match: D8LHR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHR2_ECTSI) HSP 1 Score: 78.6 bits (192), Expect = 1.580e-14 Identity = 36/65 (55.38%), Postives = 49/65 (75.38%), Query Frame = 1 Query: 1 MRNSSVALTASMKRLHGDDAILVVRNTVTGHGRTDERMFDGPVDIDTAKKIVAQGAPLWGWA*FL 195 ++ + +LTASM+RLHGD+AILVVRNTV GHG + +RMF GPV++DTA +V +G P + W L Sbjct: 305 IKTAGESLTASMRRLHGDNAILVVRNTVPGHGESFDRMFTGPVNLDTALDLVEKGPPEFEWTTIL 369
BLAST of mRNA_L-elsbetiae_contig194.5749.1 vs. uniprot
Match: A0A6H5KFW9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFW9_9PHAE) HSP 1 Score: 52.0 bits (123), Expect = 3.320e-5 Identity = 31/78 (39.74%), Postives = 41/78 (52.56%), Query Frame = 3 Query: 174 LGLGLI---PHTYTNKSKTSQRLFSENPSEPRRG-----PVTPSSLWPDMH---TNALHYCCPGPIDHWITLLYNILL 374 + L L+ P +Y S S+ + + P RG +P+ L PD H ++ LHYC PGP DHW LLYNILL Sbjct: 324 IALKLVAEAPDSYEWDSFESRNVQLQKAFSPDRGWTLLDAYSPTLLRPDSHIGNSDCLHYCIPGPADHWALLLYNILL 401 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig194.5749.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig194.5749.1 >prot_L-elsbetiae_contig194.5749.1 ID=prot_L-elsbetiae_contig194.5749.1|Name=mRNA_L-elsbetiae_contig194.5749.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=63bp MRNSSVALTASMKRLHGDDAILVVRNTVTGHGRTDERMFDGPVDIDTAKKback to top mRNA from alignment at L-elsbetiae_contig194:45680..47760- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig194.5749.1 ID=mRNA_L-elsbetiae_contig194.5749.1|Name=mRNA_L-elsbetiae_contig194.5749.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2081bp|location=Sequence derived from alignment at L-elsbetiae_contig194:45680..47760- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig194:45680..47760- >mRNA_L-elsbetiae_contig194.5749.1 ID=mRNA_L-elsbetiae_contig194.5749.1|Name=mRNA_L-elsbetiae_contig194.5749.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=378bp|location=Sequence derived from alignment at L-elsbetiae_contig194:45680..47760- (Laminarionema elsbetiae ELsaHSoW15)back to top |