mRNA_L-elsbetiae_contig19315.5722.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig19315.5722.1 vs. uniprot
Match: D8LJJ9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJJ9_ECTSI) HSP 1 Score: 254 bits (648), Expect = 4.450e-82 Identity = 143/186 (76.88%), Postives = 158/186 (84.95%), Query Frame = 1 Query: 1 GGGLGTQAVLIVGVSTIVADGLSMGLGEYLSSKAMNEYMDIERKREEWELANHRQARGWLENMVELYVKRGMSREDAQEVSTRLAKYDDCFVDA-MVAEGVGS--FATP-LDESGSIREGLVTFASFAASGMLPLLVYALSPLWSTLEAGXXXXXXXXXEPVSQGTLFFWACLVTAAALFAIGVVK 546 GGGLGTQAVLIVGVS+IVADGLSMGLGEYLSSKAMNEYMDIERKREEWELANHR+ G +ENMV+ Y++RGMSREDAQEVS RL+KYDDCFVDA MVAEGVGS FA+P LDE+GSIREGLVTF SFA SG++PLL YALSPL S + +PVSQG LF WACL+TAAALF+IGVVK Sbjct: 85 GGGLGTQAVLIVGVSSIVADGLSMGLGEYLSSKAMNEYMDIERKREEWELANHRE--GEVENMVDTYMRRGMSREDAQEVSARLSKYDDCFVDAVMVAEGVGSSMFASPPLDEAGSIREGLVTFGSFALSGIVPLLSYALSPLISASGSSG--------QPVSQGVLFLWACLLTAAALFSIGVVK 260
BLAST of mRNA_L-elsbetiae_contig19315.5722.1 vs. uniprot
Match: D8LRS5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRS5_ECTSI) HSP 1 Score: 150 bits (380), Expect = 9.110e-42 Identity = 87/182 (47.80%), Postives = 115/182 (63.19%), Query Frame = 1 Query: 1 GGGLGTQAVLIVGVSTIVADGLSMGLGEYLSSKAMNEYMDIERKREEWELANHRQARGWLENMVELYVKRGMSREDAQEVSTRLAKYDDCFVDAMVAEGVGSFATPLDESGSIREGLVTFASFAASGMLPLLVYALSPLWSTLEAGXXXXXXXXXEPVSQGTLFFWACLVTAAALFAIGVVK 546 GG L VL++G S I AD LSMG+GEYLSSKA NEY+ E++REEWEL NHR+ G + MVE++ +RGMSR+DA++V ++AKYDD FV+ M+ E +G D+ +++EG V F SFA G +PLL Y + PL S LFF ACLVTAA+LF +G +K Sbjct: 84 GGHLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKRREEWELKNHRE--GEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDDDTVKEGFVMFLSFAFFGAMPLLGYVIVPL--------------IKPDSSPAILFFVACLVTAASLFGMGAIK 249
BLAST of mRNA_L-elsbetiae_contig19315.5722.1 vs. uniprot
Match: A0A7S3XV86_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV86_HETAK) HSP 1 Score: 145 bits (365), Expect = 1.010e-39 Identity = 86/182 (47.25%), Postives = 115/182 (63.19%), Query Frame = 1 Query: 1 GGGLGTQAVLIVGVSTIVADGLSMGLGEYLSSKAMNEYMDIERKREEWELANHRQARGWLENMVELYVKRGMSREDAQEVSTRLAKYDDCFVDAMVAEGVGSFATPLDESGSIREGLVTFASFAASGMLPLLVYALSPLWSTLEAGXXXXXXXXXEPVSQGTLFFWACLVTAAALFAIGVVK 546 GGGL Q+VLI+G S I+AD LSMG+GEYLSSKA NEY+ E+KREEWEL NH++ G ++ M+++YV+RGM + DA +V +AKY+ FV+ M+AE +G DE +++EGLV F SFA G LPLL Y + P S L ++ TLF+ A T LF +G VK Sbjct: 70 GGGLAWQSVLILGFSNILADALSMGVGEYLSSKAHNEYVLSEKKREEWELRNHKE--GEIKEMIDIYVERGMGQADATQVVNTMAKYEAFFVNVMMAEELGLQVPDEDEDETLKEGLVMFLSFACFGALPLLGYVIFP--SVLGVD------------NESTLFWTAVATTLTVLFVMGAVK 235
BLAST of mRNA_L-elsbetiae_contig19315.5722.1 vs. uniprot
Match: A0A6V1NR54_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NR54_HETAK) HSP 1 Score: 145 bits (365), Expect = 1.590e-39 Identity = 86/184 (46.74%), Postives = 114/184 (61.96%), Query Frame = 1 Query: 1 GGGLGTQAVLIVGVSTIVADGLSMGLGEYLSSKAMNEYMDIERKREEWELANHRQARGWLENMVELYVKRGMSREDAQEVSTRLAKYDDCFVDAMVAEGVGSFATP--LDESGSIREGLVTFASFAASGMLPLLVYALSPLWSTLEAGXXXXXXXXXEPVSQGTLFFWACLVTAAALFAIGVVK 546 GGG+G VL++G S IVAD LSMG+GEYLSS+A EY+ ER+REEWEL NHR+ G + MVE+YV RGM+R+DA+ V R+AKYD+ FV+ M+AE +G A D + +++EGL+ FA+FA G +PLL Y + P + S LF A VT LF +G VK Sbjct: 87 GGGMGVDVVLVLGFSNIVADALSMGVGEYLSSRAHAEYVLSERRREEWELRNHRE--GEVREMVEIYVNRGMARDDAEVVLNRIAKYDEFFVNVMMAEELGMPANGQVADPADTVQEGLIMFAAFAVFGSMPLLGYCVVPALA--------------PDASSSELFAVAVFVTLLFLFGLGAVK 254
BLAST of mRNA_L-elsbetiae_contig19315.5722.1 vs. uniprot
Match: A0A835YUT7_9STRA (VIT family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUT7_9STRA) HSP 1 Score: 143 bits (360), Expect = 6.770e-39 Identity = 81/182 (44.51%), Postives = 112/182 (61.54%), Query Frame = 1 Query: 1 GGGLGTQAVLIVGVSTIVADGLSMGLGEYLSSKAMNEYMDIERKREEWELANHRQARGWLENMVELYVKRGMSREDAQEVSTRLAKYDDCFVDAMVAEGVGSFATPLDESGSIREGLVTFASFAASGMLPLLVYALSPLWSTLEAGXXXXXXXXXEPVSQGTLFFWACLVTAAALFAIGVVK 546 GGGL VL++G S I+AD LSMG+GEYLSS+A NEY+ E++REEWEL NHR+ G + MV ++ +RGMS+EDA +V ++AKYDD FV+ M++E + P + +I+EG + F SFA G LPLL Y + P+ +S LF AC VT +LF +G +K Sbjct: 76 GGGLDWPVVLVLGFSNILADALSMGVGEYLSSQAHNEYVMAEKRREEWELKNHRE--GEIAEMVAIFTQRGMSQEDASDVVNKMAKYDDFFVNLMMSEEL-QLQVPESQDETIKEGFIMFLSFATFGALPLLGYTIFPMLD--------------PDISNAILFKLACAVTGVSLFLMGAIK 240
BLAST of mRNA_L-elsbetiae_contig19315.5722.1 vs. uniprot
Match: A0A7S2V2D3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2D3_9STRA) HSP 1 Score: 139 bits (349), Expect = 7.570e-38 Identity = 73/139 (52.52%), Postives = 96/139 (69.06%), Query Frame = 1 Query: 1 GGGLGTQAVLIVGVSTIVADGLSMGLGEYLSSKAMNEYMDIERKREEWELANHRQARGWLENMVELYVKRGMSREDAQEVSTRLAKYDDCFVDAMVAEGVGSFATPLDESGSIREGLVTFASFAASGMLPLLVYALSPL 417 GGG+G VL++G S I+AD L+MG+GEYLSSKA EY+ ER+REEWEL NHR+ G + M+++YV+RGM REDA+ V R+AKYD FVD M+AE + ++ + EG+V F SFA G LPLL Y + PL Sbjct: 84 GGGMGPSVVLVLGFSNILADALAMGVGEYLSSKAQYEYVLAERRREEWELQNHRE--GEVREMIDIYVQRGMDREDAEVVLRRIAKYDSFFVDVMMAEELAMPMQDFSDAEGLMEGVVMFCSFAFFGSLPLLGYCVCPL 220
BLAST of mRNA_L-elsbetiae_contig19315.5722.1 vs. uniprot
Match: A0A7S4E2I2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E2I2_9STRA) HSP 1 Score: 138 bits (348), Expect = 4.000e-37 Identity = 83/183 (45.36%), Postives = 112/183 (61.20%), Query Frame = 1 Query: 1 GGGLGTQAVLIVGVSTIVADGLSMGLGEYLSSKAMNEYMDIERKREEWELANHRQARGWLENMVELYVKRGMSREDAQEVSTRLAKYDDCFVDAMVAEGVGSFATPLDE-SGSIREGLVTFASFAASGMLPLLVYALSPLWSTLEAGXXXXXXXXXEPVSQGTLFFWACLVTAAALFAIGVVK 546 G GL ++ VL++G I+AD ++MG+GEYLS+K+ +EY ER RE+WEL NH G +E MVE+YV+RGMSREDAQ V + +AKY D FVD M+ E +G F D S ++GL+ FASF G PL+ Y L+PL+ +P S+ LF AC VT LF++G K Sbjct: 72 GSGLTSRVVLLLGACNILADAMAMGVGEYLSTKSSDEYARRERAREDWELRNH--PEGEVEEMVEIYVQRGMSREDAQVVISTMAKYHDFFVDVMMVEELGLFVPEEDAWVESAKDGLLMFASFVVFGTAPLVGYLLTPLF-------------VHDP-SEHDLFLAACAVTGVTLFSLGAAK 238
BLAST of mRNA_L-elsbetiae_contig19315.5722.1 vs. uniprot
Match: A0A7S1CNE0_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CNE0_9STRA) HSP 1 Score: 135 bits (341), Expect = 5.120e-36 Identity = 84/183 (45.90%), Postives = 110/183 (60.11%), Query Frame = 1 Query: 1 GGGLGTQAVLIVGVSTIVADGLSMGLGEYLSSKAMNEYMDIERKREEWELANHRQARGWLENMVELYVKRGMSREDAQEVSTRLAKYDDCFVDAMVAEGVGSFATPLDESGSIREGLVTFASFAASGMLPLLVY-ALSPLWSTLEAGXXXXXXXXXEPVSQGTLFFWACLVTAAALFAIGVVK 546 GGGL +LI+G S++ AD LSMG+G+ LSSKA NE++ +ER REEWEL N ++ G ++ MV+LY +GM EDA+EV TR+AKY D FVD M+ E + P + I +GLVTF SF G +PLL Y A S L T+ A LF AC +TA LF +G+VK Sbjct: 75 GGGLSVDVILILGFSSVFADALSMGVGDALSSKAENEFIMLERSREEWELENDKE--GEVQEMVDLYTSKGMKEEDAREVITRMAKYPDFFVDVMMVEEL-ELQVPDPDDNPIWDGLVTFCSFVVFGTVPLLGYVAFSSLQLTVTA-----------------LFGIACFLTACTLFGLGMVK 237
BLAST of mRNA_L-elsbetiae_contig19315.5722.1 vs. uniprot
Match: W7TLX2_9STRA (Vacuolar iron family transporter n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLX2_9STRA) HSP 1 Score: 134 bits (338), Expect = 2.080e-35 Identity = 79/182 (43.41%), Postives = 110/182 (60.44%), Query Frame = 1 Query: 1 GGGLGTQAVLIVGVSTIVADGLSMGLGEYLSSKAMNEYMDIERKREEWELANHRQARGWLENMVELYVKRGMSREDAQEVSTRLAKYDDCFVDAMVAEGVGSFATPLDESGSIREGLVTFASFAASGMLPLLVYALSPLWSTLEAGXXXXXXXXXEPVSQGTLFFWACLVTAAALFAIGVVK 546 GGGL + V+++G S I AD SMG+GEYLSSKA NE++ E++RE WEL N R+ G ++ M+++YV+RGM +DA++V +++KYDD FV+ M+ E +G P ++EG+V F SFA G +PLL YAL PL + LF AC VTA LF +G VK Sbjct: 91 GGGLPVEVVMVLGFSNIFADAFSMGMGEYLSSKAHNEFVFKEKERESWELQNFRE--GEIKEMIDIYVERGMEPDDAEDVVRKMSKYDDFFVNVMMVEELG-LQVPDPNDDIVKEGVVMFLSFAGFGAMPLLGYALIPL--------------CFPSLGPSHLFNIACGVTALTLFIMGAVK 255
BLAST of mRNA_L-elsbetiae_contig19315.5722.1 vs. uniprot
Match: A0A7S0AV53_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AV53_9STRA) HSP 1 Score: 129 bits (323), Expect = 5.160e-34 Identity = 80/183 (43.72%), Postives = 107/183 (58.47%), Query Frame = 1 Query: 1 GGGLGTQAVLIVGVSTIVADGLSMGLGEYLSSKAMNEYMDIERKREEWELANHRQARGWLENMVELYVKRGMSREDAQEVSTRLAKYDDCFVDAMVAEGVGSFATPLD-ESGSIREGLVTFASFAASGMLPLLVYALSPLWSTLEAGXXXXXXXXXEPVSQGTLFFWACLVTAAALFAIGVVK 546 GG L TQ +L++G S I AD LSMG+GE+LSSKA NE++ ERKRE WE+ N+ G +E MV++YV+RGM R DA +V ++KY D FVD M+AE + D E +++EG V F SFA G +PLL YA+ P + LF AC++T LF +G VK Sbjct: 13 GGNLSTQVILVLGFSNIFADALSMGVGEFLSSKAENEWILSERKREAWEMENY--PEGEIEEMVDIYVERGMVRADAVQVIQIMSKYKDFFVDVMMAEELQLQVPDEDHEMEAMKEGFVMFCSFAIFGAMPLLGYAIFPT--------------AFPHWGEQDLFAAACVITGVVLFLMGCVK 179 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19315.5722.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig19315.5722.1 >prot_L-elsbetiae_contig19315.5722.1 ID=prot_L-elsbetiae_contig19315.5722.1|Name=mRNA_L-elsbetiae_contig19315.5722.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=182bp GGGLGTQAVLIVGVSTIVADGLSMGLGEYLSSKAMNEYMDIERKREEWELback to top mRNA from alignment at L-elsbetiae_contig19315:709..2590- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig19315.5722.1 ID=mRNA_L-elsbetiae_contig19315.5722.1|Name=mRNA_L-elsbetiae_contig19315.5722.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1882bp|location=Sequence derived from alignment at L-elsbetiae_contig19315:709..2590- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig19315:709..2590- >mRNA_L-elsbetiae_contig19315.5722.1 ID=mRNA_L-elsbetiae_contig19315.5722.1|Name=mRNA_L-elsbetiae_contig19315.5722.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1092bp|location=Sequence derived from alignment at L-elsbetiae_contig19315:709..2590- (Laminarionema elsbetiae ELsaHSoW15)back to top |