mRNA_L-elsbetiae_contig19.5586.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig19.5586.1
Unique NamemRNA_L-elsbetiae_contig19.5586.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig19.5586.1 vs. uniprot
Match: D7FMY1_ECTSI (Aminotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMY1_ECTSI)

HSP 1 Score: 724 bits (1868), Expect = 1.910e-251
Identity = 357/444 (80.41%), Postives = 396/444 (89.19%), Query Frame = 1 
Query:  103 ATVASVALCLTPSSGFMTMVTSIPKPVASSPTVSAPPVFTKDFALPMQMPEESIAGVMEVMRSGRLNRYSSASAETSQVAQLEQDVVEFCSKGTGDGVRFALGVNSCSSAILIALLGVGVQPGDEVLSNAFTFTAVPSAILRTGAKPVLVECKDSWVMDLDDLEKKAVASKAKVLLLSHMRSKVCDMDRLYEICDKHGIAVVEDCAHALGVTWRGEQLGNRAKAAAYSCQSDKLINSGEGGFLTTNDEELFSRAIYMSGCYEMRYGKHSLRASDELMEKAMLSERNLSVRMTELVGAVIRPLLANLPQRMEQFSRRYHEVVGVLEKEVPDLIEVPKPLEHATTVGDHLNFHLVNPTEEENLAFQAKTKEMGVPLNWLRSKVNARWHVNWRGYGGPVQDLPATDAALASAYDLKLPPHFDDEDFEHIAKNIAYAARVTVRAGEQQ 1434
            A   S+  C +P+  F  MVTS+PKP  +     APPVF KDF LPM +PEESIAGV++V+RSGR+NRYS++SAE SQVAQLEQ++V+F  +G G GV++ALGVNSCSSAILIALL VGV+ GDEVLSNAFTFTAVPSAILR G KPVLVEC++SW MDLDDLEKKA +S AKVLLLSHMRSK+CDMDRLYEICDKHG+ VVEDCAHALGV WRG QLGNRAK AAYSCQSDKLINSGEGGFLTTNDEELFS+AIYMSGCYEMRYGKHS+R SDELMEKAMLSERNLSVRMTE+  AVIRPLLANLP+R+ QF RRY EVVG+LE++VPDLIEVPKPLEHA+ VGDHLNFHLV+PTEEEN AFQAKTKEMGVPLNWLRS VNAR+HVNWRGYGGPVQDLPATDAALA+AYDLKLPPHFDDEDF H+AK IAYAARVTVRAG ++
Sbjct:    4 AAALSILCCASPTDAFA-MVTSLPKPAVAG-AAKAPPVFKKDFTLPMGIPEESIAGVVDVLRSGRINRYSASSAEASQVAQLEQELVDFTGRGEGPGVKYALGVNSCSSAILIALLSVGVKSGDEVLSNAFTFTAVPSAILRIGGKPVLVECENSWGMDLDDLEKKAASSTAKVLLLSHMRSKMCDMDRLYEICDKHGLTVVEDCAHALGVNWRGTQLGNRAKVAAYSCQSDKLINSGEGGFLTTNDEELFSKAIYMSGCYEMRYGKHSVRGSDELMEKAMLSERNLSVRMTEMTAAVIRPLLANLPERVAQFHRRYQEVVGILEEQVPDLIEVPKPLEHASVVGDHLNFHLVDPTEEENKAFQAKTKEMGVPLNWLRSPVNARYHVNWRGYGGPVQDLPATDAALATAYDLKLPPHFDDEDFAHLAKIIAYAARVTVRAGGEE 445
[Close]
BLAST of mRNA_L-elsbetiae_contig19.5586.1 vs. uniprot
Match: A0A7S3ZU99_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZU99_9STRA)

HSP 1 Score: 503 bits (1296), Expect = 1.560e-165
Identity = 248/410 (60.49%), Postives = 305/410 (74.39%), Query Frame = 1 
Query:  184 ASSPTVSAPPVFTKDFALPMQMPEESIAGVMEVMRSGRLNRYSSASAETSQVAQLEQDVVEFCSKGTGDGVRFALGVNSCSSAILIALLGVGVQPGDEVLSNAFTFTAVPSAILRTGAKPVLVECKDSWVMDLDDLEKKAVA-SKAKVLLLSHMRSKVCDMDRLYEICDKHGIAVVEDCAHALGVTWRGEQLGNRAKAAAYSCQSDKLINSGEGGFLTTNDEELFSRAIYMSGCYEMRYGKHSLRASDELMEKAMLSERNLSVRMTELVGAVIRPLLANLPQRMEQFSRRYHEVVGVLEKEVPDLIEVPKPLEHATTVGDHLNFHLVNPTEEENLAFQAKTKEMGVPLNWLRSKVNARWHVNWRGYGGPVQDLPATDAALASAYDLKLPPHFDDEDFEHIAKNIAYAARV 1410
            A++P   AP  F KDF+ PM +PEE IA  +EVMR GRL RY + SAETS VAQ E++     ++      ++ALGVNSCSSAI++AL+ VGV PGD+V++N FTFTA+PS I+R GA+PVLVE   SW MDLDDLEKK  A   AKVLLLSHMR KVCDMDR+ EIC+K+GI +VEDCAH+ GVTWRG+QLG  AK  AYS QSDK+INSGEGGF+TT+D+E+ ++ IY+SGCYE RYGKH++R +DEL E AM    NLS RM E+  AV+RPL+ NLPQR+E ++RRY  VV VL +E  D+I VP   E   TVGDHLNF+L   T+E+N  F+     MGVP++W +S+VNARWHVNWR YG P  DLP TD  L  AYDLK+PP+FDD DF   A+ IAYAARV
Sbjct:   35 AAAPATGAPDPFLKDFSRPMSIPEEGIAAAVEVMRGGRLFRYCATSAETSHVAQAEKEFAAMVNQ------KYALGVNSCSSAIMLALMAVGVDPGDQVITNGFTFTALPSTIMRLGAEPVLVEATKSWTMDLDDLEKKIAAFPDAKVLLLSHMRGKVCDMDRVVEICEKNGITLVEDCAHSCGVTWRGKQLGYHAKVTAYSTQSDKVINSGEGGFITTDDDEIAAKIIYLSGCYERRYGKHAVRPADELCEVAMAEMPNLSCRMNEVTAAVMRPLIKNLPQRVEDYNRRYDSVVKVLREEAGDIIVVPTQDERVGTVGDHLNFYLTGVTDEQNALFRQTCVAMGVPVSWFQSQVNARWHVNWRKYGSPTFDLPNTDEVLRFAYDLKMPPYFDDADFPAFARVIAYAARV 438
[Close]
BLAST of mRNA_L-elsbetiae_contig19.5586.1 vs. uniprot
Match: A0A7S4E6V5_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E6V5_9STRA)

HSP 1 Score: 501 bits (1290), Expect = 1.060e-164
Identity = 252/440 (57.27%), Postives = 318/440 (72.27%), Query Frame = 1 
Query:  103 ATVASVALCLTPSSGFMTMVTSIPKPVAS---SPTVSAPPVFTKDFALPMQMPEESIAGVMEVMRSGRLNRYSSASAETSQVAQLEQDVVEFCSKGTGDGVRFALGVNSCSSAILIALLGVGVQPGDEVLSNAFTFTAVPSAILRTGAKPVLVECKDSWVMDLDDLEKKAVA-SKAKVLLLSHMRSKVCDMDRLYEICDKHGIAVVEDCAHALGVTWRGEQLGNRAKAAAYSCQSDKLINSGEGGFLTTNDEELFSRAIYMSGCYEMRYGKHSLRASDELMEKAMLSERNLSVRMTELVGAVIRPLLANLPQRMEQFSRRYHEVVGVLEKEVPDLIEVPKPLEHATTVGDHLNFHLVNPTEEENLAFQAKTKEMGVPLNWLRSKVNARWHVNWRGYGGPVQDLPATDAALASAYDLKLPPHFDDEDFEHIAKNIAYAARV 1410
            A +A++ALC + ++   +    +    A+   +   +AP  F KDF  PM +PEE IA  +EVMR GRL RY + SAETSQVAQ E++     ++      ++ALGVNSCSSAI++AL+ VGV+PGD+V++N FTFTA+PS I+R GA+PVLVE   SW+MDLDDLEKK  A   AKVLLLSHMR KV DMDR+ EIC+K+GI +VEDCAH+ GVTWRG+QLG  AK  AYS QSDK+INSGEGGF+TT+D+E+ ++ IY+SGCYE RYGKH++R  D+L E AM    NLS RM E+  AV+RPL+ NLPQR+E ++RRY  VV VL +E  D+I VP   E   TVGDHLNF+L   T+E+N  F+     MGVP++W +SKVNARWHVNWR YG P  DLP TD  L  AYDLK+PP+FDDEDF   AK IAYA+ V
Sbjct:    2 ARIAAIALCCSSAAALSSPAAGLQAQTAAPARAAVAAAPEPFLKDFTRPMSIPEEGIAAAVEVMRGGRLFRYCATSAETSQVAQAEKEFAAMVNQ------KYALGVNSCSSAIMLALMAVGVEPGDQVITNGFTFTALPSTIMRLGAEPVLVEATKSWIMDLDDLEKKIAAFPDAKVLLLSHMRGKVADMDRVVEICEKNGITLVEDCAHSCGVTWRGKQLGYHAKVTAYSTQSDKVINSGEGGFVTTDDDEIAAKMIYLSGCYERRYGKHAVRPPDDLCEVAMAEMPNLSCRMNEVTAAVMRPLIKNLPQRVEAYNRRYDAVVKVLREEAGDVIVVPTQDERVGTVGDHLNFYLTGVTDEQNALFRQTCVAMGVPVSWFQSKVNARWHVNWRKYGSPTFDLPNTDEVLRFAYDLKMPPYFDDEDFPAFAKVIAYASNV 435
[Close]
BLAST of mRNA_L-elsbetiae_contig19.5586.1 vs. uniprot
Match: A0A6H5K4I9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4I9_9PHAE)

HSP 1 Score: 468 bits (1204), Expect = 1.340e-152
Identity = 228/342 (66.67%), Postives = 273/342 (79.82%), Query Frame = 1 
Query:  397 RFALGVNSCSSAILIALLGVGVQPGDEVLSNAFTFTAVPSAILRTGAKPVLVECKDSWVMDLDDLEKKAVASKAKVLLLSHMRSKVCDMDRLYEICDKHGIAVVEDCAHALGVTWRGEQLGNRAKAAAYSCQSDKLINSGEGGFLTTNDEELFSRAIYMSGCYEMRYGKHSLRASDELMEKAMLSERNLSVRMTELVGAVIRPLLANLPQRMEQFSRRYHEVVGVLEKEVPDLIEVPKPLEHATTVGDHLNFHLVNPTEEENLAFQAKTKEMGVPLNWLRSKVNARWHVNWRGYGGPVQDLPATDAALASAYDLKLPPHFDDEDFEHIAKNIAYAARVTVRA 1422
            ++A+GVNSCSSAILI L+ VGV+ GDEVL+NAFTFTAVPS ILR GAKP LVEC DSW MDLDDLEKKA   +AKVLLLSHMR KVCDMDR+ EIC++H + +VEDCAHA GVTWRG QLG  AK +A+S QSDK+INSGEGGF+TT+D+E+ ++AIY+SG YE RY KH +R SD L E A  SE NLSVRM+E   AV+RPLL +LP R+ +++RRY+ VV  +E E   LI+VPK  E    VGDHLNF L   ++E NL+FQAK KE+GVP+NWLRS  NARWHVNWRG+G P QDLP TD+ALA AYDLKLPP+F+DEDF H+A+ IAYAAR   R+
Sbjct:    4 KYAVGVNSCSSAILIGLMCVGVKAGDEVLTNAFTFTAVPSTILRLGAKPCLVECGDSWTMDLDDLEKKANGGRAKVLLLSHMRGKVCDMDRVSEICERHRLTLVEDCAHAAGVTWRGRQLGYHAKVSAFSTQSDKVINSGEGGFVTTSDDEMAAKAIYLSGAYEGRYSKHLVRPSDALCEAARFSEPNLSVRMSETTAAVLRPLLKSLPSRVLEYNRRYNIVVKTMEAEALGLIDVPKQHELVGAVGDHLNFRLKKFSDEGNLSFQAKCKELGVPVNWLRSGGNARWHVNWRGFGCPAQDLPVTDSALAMAYDLKLPPYFEDEDFVHLARIIAYAARSCCRS 345
[Close]
BLAST of mRNA_L-elsbetiae_contig19.5586.1 vs. uniprot
Match: A0A8J2WEJ6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WEJ6_9STRA)

HSP 1 Score: 469 bits (1207), Expect = 6.400e-150
Identity = 231/377 (61.27%), Postives = 284/377 (75.33%), Query Frame = 1 
Query:  283 MRSGRLNRYSSASAETSQVAQLEQDVVEFCSKGTGDGVRFALGVNSCSSAILIALLGVGVQPGDEVLSNAFTFTAVPSAILRTGAKPVLVECKDSWVMDLDDLEKKAVA-SKAKVLLLSHMRSKVCDMDRLYEICDKHGIAVVEDCAHALGVTWRGEQLGNRAKAAAYSCQSDKLINSGEGGFLTTNDEELFSRAIYMSGCYEMRYGKHSLRASDELMEKAMLSERNLSVRMTELVGAVIRPLLANLPQRMEQFSRRYHEVVGVLEKEVPDLIEVPKPLEHATTVGDHLNFHLVNPTEEENLAFQAKTKEMGVPLNWLRSKVNARWHVNWRGYGGPVQDLPATDAALASAYDLKLPPHFDDEDFEHIAKNIAYAARV 1410
            MR GRL RY + SAETSQVAQ E++     ++      ++ALGVNSCSSAI++AL+ VGV+PGD+V++N FTFTA+PS I+R GA+PVLVE   SW+MDLDDLEKK  A   AKVLLLSHMR KV DMDR+ EIC+K+GI +VEDCAH+ GVTWRG+QLG  AK  AYS QSDK+INSGEGGF+TT+D+E+ ++ IY+SGCYE RYGKH++R  D+L E AM    NLS RM E+  AV+RPL+ NLPQR+E ++RRY  VV VL +E  D+I VP   E   TVGDHLNF+L   T+E+N  F+     MGVP++W +SKVNARWHVNWR YG P  DLP TD  L  AYDLK+PP+FDDEDF   AK IAYA+ V
Sbjct:    1 MRGGRLFRYCATSAETSQVAQAEKEFAAMVNQ------KYALGVNSCSSAIMLALMAVGVEPGDQVITNGFTFTALPSTIMRLGAEPVLVEATKSWIMDLDDLEKKIAAFPDAKVLLLSHMRGKVADMDRVVEICEKNGITLVEDCAHSCGVTWRGKQLGYHAKVTAYSTQSDKVINSGEGGFVTTDDDEIAAKMIYLSGCYERRYGKHAVRPPDDLCEVAMAEMPNLSCRMNEVTAAVMRPLIKNLPQRVEAYNRRYDAVVKVLREEAGDVIVVPTQDERVGTVGDHLNFYLTGVTDEQNALFRQTCVAMGVPVSWFQSKVNARWHVNWRKYGSPTFDLPNTDEVLRFAYDLKMPPYFDDEDFPAFAKVIAYASNV 371
[Close]
BLAST of mRNA_L-elsbetiae_contig19.5586.1 vs. uniprot
Match: A0A7S0J159_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J159_9EUKA)

HSP 1 Score: 452 bits (1164), Expect = 5.410e-145
Identity = 234/417 (56.12%), Postives = 288/417 (69.06%), Query Frame = 1 
Query:  178 PVASSPTVSAPPVFTKDFALPMQMPEESIAGVMEVMRSGRLNRYSSASAETSQVAQLEQDVVEFCSKGTGDGVRFALGVNSCSSAILIALLGVGVQPGDEVLSNAFTFTAVPSAILRTGAKPVLVECKDSWVMDLDDLEKKAVASKAKVLLLSHMRSKVCDMDRLYEICDKHGIAVVEDCAHALGVTWRGEQLGNRAKAAAYSCQSDKLINSGEGGFLTTNDEELFSRAIYMSGCYEMRYGKHSLRASDELMEKAMLSERNLSVRMTELVGAVIRPLLANLPQRMEQFSRRYHEVVGVLEKEVPDLIEVPKPLEHATTVGDHLNFHLVNPTEEENLAFQAKTKEMGVPLNWLRSKVNARWHVNWRGYGGPVQDLPATDAALASAYDLKLPPHFDDEDFEHIAKNIAYAARVTV-RAG 1425
            P A +P +  PP FTKDF+ PM +P   I   +EVMRSGRL RY    A  SQVA  E +  +   +      ++ALGVNSCSSAI++AL+ VGV  GD VL+N FTFTA+PS I+R  A+PVLVE  D W MDLDDLE+KA AS A VLLLSHMR KV DMDR+ +IC +HG+ +VEDCAH+ GV WRG QLG   + AAYS QSDK+INSGEGGFLTTND  L ++AIY+SGCYE RY KH      EL E AM+   NLS RM E+  A +RPL+ANL  R+ +++ RY  VV +L ++  D I VP+ L   ++VGDHLNF+L   T E+N  F      MGVP+++ RS VNARWHVNWR YG P  +LP  D+ LA+AYDLKLPP+F   DF H+A+ IAYAA V V RAG
Sbjct:   96 PPAGAP-LEPPPPFTKDFSKPMAVPAAGIEAAVEVMRSGRLFRYC---AVDSQVALAESEFAQMVDQ------KYALGVNSCSSAIMLALMVVGVAAGDRVLTNGFTFTALPSTIMRLHAEPVLVEATDQWTMDLDDLERKAAASGATVLLLSHMRGKVADMDRVADICQRHGLRLVEDCAHSCGVKWRGRQLGYHGEVAAYSTQSDKVINSGEGGFLTTNDGGLMAKAIYLSGCYERRYAKHGTPPPKELCEAAMMEMPNLSCRMNEVTAACVRPLIANLDARVVEYNDRYAVVVNILREQAGDHIVVPEQLPQVSSVGDHLNFYLRGVTAEQNTLFHEVCTSMGVPVSYFRSPVNARWHVNWRKYGSPTYELPQVDSLLATAYDLKLPPYFAAADFAHLAQVIAYAANVAVGRAG 502
[Close]
BLAST of mRNA_L-elsbetiae_contig19.5586.1 vs. uniprot
Match: A0A7S3FD09_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3FD09_9VIRI)

HSP 1 Score: 442 bits (1137), Expect = 7.700e-142
Identity = 220/407 (54.05%), Postives = 286/407 (70.27%), Query Frame = 1 
Query:  199 VSAPPVFTKDFALPMQMPEESIAGVMEVMRSGRLNRYSSASAETSQVAQLEQDVVEFCSKGTGDGVRFALGVNSCSSAILIALLGVGVQPGDEVLSNAFTFTAVPSAILRTGAKPVLVECKDSWVMDLDDLEKKAVASKAKVLLLSHMRSKVCDMDRLYEICDKHGIAVVEDCAHALGVTWRGEQLGNRAKAAAYSCQSDKLINSGEGGFLTTNDEELFSRAIYMSGCYEMRYGKHSLRASDELMEKAMLSERNLSVRMTELVGAVIRPLLANL-PQRMEQFSRRYHEVVGVLEKEVPDLIEVPKPLEHATTVGDHLNFHLVNPTEEENLAFQAKTKEMGVPLNWLRSKVNARWHVNWRGYGGPVQDLPATDAALASAYDLKLPPHFDDEDFEHIAKNIAYAARVTV 1416
            V  P  F KDF+ PM +P+E I   +EVMR+GR+ RYSS SAETSQVA  E++  E        G ++A+ VNSCSSAI +A++ VGV+PGD+V++N FTFTA+PS I+R GA+PVLVE  + + MDLDDLEKKA  S AKVLLLSHMR KVCDMDR+ EIC+K+G+ +VEDCAH  GV W+G QLG  A  A YS QSDK+INSGEGGF+TT+ +++ ++AIY +GCYE RY KH ++  + L E+ ML++ NLS RMTE+  A++RPL+ NL  +R  +++ RY  +  V+     + I VP+  EH   +GDHLNF L N T E+N AF+   KE+G+ L W  S VNAR+H NW  YG PV DLP TD  L  +YD+K PP FD+ED+ HIA  IAYA    V
Sbjct:   47 VEKPDSFVKDFSKPMSIPQEGIDAAVEVMRTGRIFRYSSTSAETSQVANAEKEFAEMV------GQKYAIAVNSCSSAIFVAMMCVGVKPGDQVITNGFTFTALPSCIMRIGAEPVLVEATEQYTMDLDDLEKKAQESDAKVLLLSHMRGKVCDMDRVVEICEKYGLTLVEDCAHGCGVMWKGRQLGYHAAVACYSTQSDKVINSGEGGFITTDVDDIAAQAIYYTGCYERRYNKHLVQPPEYLCEQYMLTKPNLSCRMTEVTAAMMRPLIRNLYSERKPRYNARYAMLCKVMAAMAGEHIFVPEQHEHVGNMGDHLNFTLRNVTPEQNAAFRDTVKELGITLGWFTSNVNARFHKNWEKYGTPVYDLPQTDNILEYSYDMKCPPDFDNEDYPHIAHCIAYAVNKAV 447
[Close]
BLAST of mRNA_L-elsbetiae_contig19.5586.1 vs. uniprot
Match: K8ECV9_9CHLO (Aminotransferase, DegT/DnrJ/EryC1/StrS family protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8ECV9_9CHLO)

HSP 1 Score: 431 bits (1107), Expect = 1.570e-136
Identity = 213/399 (53.38%), Postives = 275/399 (68.92%), Query Frame = 1 
Query:  208 PPVFTKDFALPMQMPEESIAGVMEVMRSGRLNRYSSASAETSQVAQLEQDVVEFCSKGTGDGVRFALGVNSCSSAILIALLGVGVQPGDEVLSNAFTFTAVPSAILRTGAKPVLVECKDSWVMDLDDLEKKAVASKAKVLLLSHMRSKVCDMDRLYEICDKHGIAVVEDCAHALGVTWRGEQLGNRAKAAAYSCQSDKLINSGEGGFLTTNDEELFSRAIYMSGCYEMRYGKHSLRASDELMEKAMLSERNLSVRMTELVGAVIRPLLANL-PQRMEQFSRRYHEVVGVLEKEVPDLIEVPKPLEHATTVGDHLNFHLVNPTEEENLAFQAKTKEMGVPLNWLRSKVNARWHVNWRGYGGPVQDLPATDAALASAYDLKLPPHFDDEDFEHIAKNIAYA 1401
            P  FTKDF+ PM +P E I   + VM SGR+ RY + SAETS+VAQ E    E        G ++A+GVNSCSSAI IA+L  GV+ GD+VL+N FTFTA+PS ILR G +PVLVEC +++ MDLDDL+KKA  S AKVLL+SHMR KVCDMD++  IC+KHG+ ++EDCAH  GV ++G QLG      AYS QSDK+INSGEGGF+TT+D+++ +R +YMSGCYE RY KH+     EL EK ML+  NLS RM E+  A++RPL+ANL  +R+ ++  R+  +  V++    + + VP    +   VGDHLNF L N TEEEN  F+  T E+GV L W  S VNAR+H NW  YG P  DLP TD  L  +YD+K+PP F+ EDF+HI   I+YA
Sbjct:  110 PEKFTKDFSKPMSIPTEGIEAAIRVMESGRVFRYCATSAETSEVAQAEDQFAEMV------GQKYAIGVNSCSSAIFIAMLATGVEQGDKVLTNGFTFTALPSCILRIGCEPVLVECTENFTMDLDDLDKKAGESGAKVLLMSHMRGKVCDMDKVVAICEKHGMKLIEDCAHGCGVRYKGRQLGYHGVVTAYSTQSDKVINSGEGGFITTDDDDIAARCLYMSGCYERRYSKHARMPPQELCEKYMLTMPNLSSRMNEVTAAMMRPLIANLYSERLPRYMERWLLITSVIDLMAGEYVSVPTSGPNVEDVGDHLNFTLKNVTEEENAKFREITTELGVNLGWFTSSVNARFHKNWEKYGTPKYDLPQTDKVLEYSYDMKMPPDFETEDFQHIGHVISYA 502
[Close]
BLAST of mRNA_L-elsbetiae_contig19.5586.1 vs. uniprot
Match: A0A7S3NJM7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJM7_9STRA)

HSP 1 Score: 372 bits (954), Expect = 2.450e-115
Identity = 200/404 (49.50%), Postives = 259/404 (64.11%), Query Frame = 1 
Query:  199 VSAPPVFTKDFALPMQMPEESIAGVMEVMRSGRLNRYSSASAETSQVAQLEQDVVEFCSKGTGDGVRFALGVNSCSSAILIALLGVGVQPGDEVLSNAFTFTAVPSAILRTGAKPVLVECKDSWVMDLDDLEKKAVASK-AKVLLLSHMRSKVCDMDRLYEICDKHGIAVVEDCAHALGVTWRGEQLGNRAKAAAYSCQSDKLINSGEGGFLTTNDEELFSRAIYMSGCYEMRYGKHSLRASDELMEKAMLSERNLSVRMTELVGAVIRPLLANLPQRMEQFSRRYHEVVGVLEKEVPDLIEVPKPLEHATTVGDHLNFHLV-NPTEEENLAFQAKTKEMGVPLNWLRSKVNARWHVNWRGYGGPVQDLPATDAALASAYDLKLPPHFDDEDFEHIAKNIAYAA 1404
            V  P  F KDF+ PM +PE  IA  ++VM+SGRL RY    A  SQV+ LE++  EF  +      ++ + VNSCSSAI+++LL  G+QPGD+V +N FTFTA+PS I+R  A P+LVE    W M+LDDL+ K    K  K++L+SHMR +VCDMDRL EIC +    ++EDCAH  GV W   QLG     A+YS QSDK+INSGEGG L T+D ++ ++ IYMSG YE RY KH  R  D L E+AML   NLS RM+EL  AV RPLLANLP R+  ++ RY  +  +  K   ++++VP        VGDH NF+L  N TE +N  F+A   + GVP++   S +NAR+H NWR +G P  DLP TD  L  +YDLKLPP F   D EHIA  + YAA
Sbjct:   25 VIEPTKFEKDFSQPMAVPESGIAAAIQVMKSGRLFRYC---AIESQVSMLEKEFAEFTQR------KYCVAVNSCSSAIMLSLLAAGIQPGDKVATNGFTFTALPSTIMRLNAIPILVESCQDWTMNLDDLQTKLNLHKDIKIVLVSHMRGRVCDMDRLVEICAER--ILLEDCAHGCGVKWNNRQLGYHGVLASYSTQSDKVINSGEGGLLVTDDAQIAAQLIYMSGAYERRYQKHLTRPDDILCEEAMLKYPNLSCRMSELTAAVARPLLANLPSRVITYNARYDLICSIATKN--NVLKVPGHDYRCAPVGDHFNFYLSSNLTEAQNQKFKAICHQFGVPVSSFISPINARYHKNWRKFGAPHFDLPQTDHILRYSYDLKLPPIFTSSDIEHIANILDYAA 415
[Close]
BLAST of mRNA_L-elsbetiae_contig19.5586.1 vs. uniprot
Match: F0YLY5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLY5_AURAN)

HSP 1 Score: 326 bits (836), Expect = 7.080e-98
Identity = 169/387 (43.67%), Postives = 241/387 (62.27%), Query Frame = 1 
Query:  274 MEVMRSGRLNRYSSASAETSQVAQLEQDVVEFCSKGTGDGVRFALGVNSCSSAILIALLGVGVQPGDEVLSNAFTFTAVPSAILRTGAKPVLVECKDSWVMDLDDLEKKAVA-SKAKVLLLSHMRSKVCDMDRLYEICDKHGIAVVEDCAHALGVTWRGEQLGNRAKAAAYSCQSDKLINSGEGGFLTTNDEELFSRAIYMSGCYEMRYGKHSLRASDE-LMEKAMLSERNLSVRMTELVGAVIRPLLANLPQRMEQFSRRYHEVVGVLEKEVPDLIEVPKPLEHATTVGDHLNFHLVNPTEEENLAFQAKTKEMGVPLNWLRSKVNARWHVNWRGYGGPVQDLPATDAALASAYDLKLPPHFDDEDFEHIAKNIAYAARVTVRAGE 1428
            +  MRSGRL RY ++SA +S+VA+ E++  +  +     G RFA+GVNS SSA+++ L+ VGV+PGD V+ N F FT VPS I+R GA+PVLV+    + +D+ DLE K  A   A+ L+LSH R +VCD+DR+  + +   + VVEDC HA G +WRG  +G     AA+  +SD ++N GE GF TT+D E  ++ +Y+SGCYE RYGKH  R  D+ L+E+AM +   LS RM+EL  A +RP +A+L  R+ + +RR+  +   L       + +P+    A+ VGD L F +    E  N  F+     +GVP+ WL+S  NA +H NWR YG P  +LP TDA L +AYDL LP +F D+D  H+A+ +AYA      A E
Sbjct:   58 VRAMRSGRLFRYGASSAASSEVARAEREFADGVA-----GSRFAVGVNSGSSALMLGLMAVGVKPGDRVVCNGFAFTGVPSTIMRLGAEPVLVDTDAHFRLDVADLEAKLDAFPDARALVLSHTRGRVCDLDRVAALAEARKLDVVEDCGHAAGASWRGRPVGRLGAVAAFGARSDSMLNGGEAGFATTDDAETAAKLVYLSGCYERRYGKHGARPEDDDLLERAMATMPYLSTRMSELSAACLRPAVASLADRVVEANRRHALIARSLGDLAGGGVVLPESDPRASCVGDRLTFSVPALDEAANGFFRTTCVALGVPVAWLKSPANAFYHGNWRNYGAPTFELPGTDALLETAYDLALPAYFGDDDLRHVAEIVAYAYACAAAASE 439
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19.5586.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMY1_ECTSI1.910e-25180.41Aminotransferase n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
A0A7S3ZU99_9STRA1.560e-16560.49Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S4E6V5_9STRA1.060e-16457.27Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A6H5K4I9_9PHAE1.340e-15266.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8J2WEJ6_9STRA6.400e-15061.27Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S0J159_9EUKA5.410e-14556.12Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7S3FD09_9VIRI7.700e-14254.05Hypothetical protein n=1 Tax=Prasinoderma singular... [more]
K8ECV9_9CHLO1.570e-13653.38Aminotransferase, DegT/DnrJ/EryC1/StrS family prot... [more]
A0A7S3NJM7_9STRA2.450e-11549.50Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
F0YLY5_AURAN7.080e-9843.67Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig19contigL-elsbetiae_contig19:38173..47218 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score723.8
Seed ortholog evalue5e-206
Seed eggNOG ortholog2880.D7FMY1
Hectar predicted targeting categorychloroplast
EggNOG free text desc.Aminotransferase, DegT DnrJ EryC1 StrS family protein
EggNOG OGs2QQV8@2759,COG0399@1
COG Functional cat.M
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionAminotransferase
Ec32 orthologEc-25_002750.1
Exons7
Model size3176
Cds size1350
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815789.5100281-UTR-L-elsbetiae_contig19:38172..399081622815789.5100281-UTR-L-elsbetiae_contig19:38172..39908Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig19 38173..39908 -
1691683103.969717-UTR-L-elsbetiae_contig19:38172..399081691683103.969717-UTR-L-elsbetiae_contig19:38172..39908Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig19 38173..39908 -
1622815789.5928533-UTR-L-elsbetiae_contig19:47128..472181622815789.5928533-UTR-L-elsbetiae_contig19:47128..47218Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig19 47129..47218 -
1691683104.0534256-UTR-L-elsbetiae_contig19:47128..472181691683104.0534256-UTR-L-elsbetiae_contig19:47128..47218Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig19 47129..47218 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815789.5229886-CDS-L-elsbetiae_contig19:39908..401541622815789.5229886-CDS-L-elsbetiae_contig19:39908..40154Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19 39909..40154 -
1691683103.9822257-CDS-L-elsbetiae_contig19:39908..401541691683103.9822257-CDS-L-elsbetiae_contig19:39908..40154Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19 39909..40154 -
1622815789.5323799-CDS-L-elsbetiae_contig19:40717..408521622815789.5323799-CDS-L-elsbetiae_contig19:40717..40852Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19 40718..40852 -
1691683103.9932292-CDS-L-elsbetiae_contig19:40717..408521691683103.9932292-CDS-L-elsbetiae_contig19:40717..40852Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19 40718..40852 -
1622815789.5422068-CDS-L-elsbetiae_contig19:41802..419631622815789.5422068-CDS-L-elsbetiae_contig19:41802..41963Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19 41803..41963 -
1691683104.0019271-CDS-L-elsbetiae_contig19:41802..419631691683104.0019271-CDS-L-elsbetiae_contig19:41802..41963Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19 41803..41963 -
1622815789.5522242-CDS-L-elsbetiae_contig19:42267..423941622815789.5522242-CDS-L-elsbetiae_contig19:42267..42394Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19 42268..42394 -
1691683104.010069-CDS-L-elsbetiae_contig19:42267..423941691683104.010069-CDS-L-elsbetiae_contig19:42267..42394Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19 42268..42394 -
1622815789.5642664-CDS-L-elsbetiae_contig19:43048..431681622815789.5642664-CDS-L-elsbetiae_contig19:43048..43168Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19 43049..43168 -
1691683104.0180554-CDS-L-elsbetiae_contig19:43048..431681691683104.0180554-CDS-L-elsbetiae_contig19:43048..43168Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19 43049..43168 -
1622815789.5737784-CDS-L-elsbetiae_contig19:43527..436121622815789.5737784-CDS-L-elsbetiae_contig19:43527..43612Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19 43528..43612 -
1691683104.0263143-CDS-L-elsbetiae_contig19:43527..436121691683104.0263143-CDS-L-elsbetiae_contig19:43527..43612Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19 43528..43612 -
1622815789.5831745-CDS-L-elsbetiae_contig19:46652..471281622815789.5831745-CDS-L-elsbetiae_contig19:46652..47128Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19 46653..47128 -
1691683104.0351195-CDS-L-elsbetiae_contig19:46652..471281691683104.0351195-CDS-L-elsbetiae_contig19:46652..47128Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig19 46653..47128 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig19.5586.1prot_L-elsbetiae_contig19.5586.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig19 39909..47128 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig19.5586.1

>prot_L-elsbetiae_contig19.5586.1 ID=prot_L-elsbetiae_contig19.5586.1|Name=mRNA_L-elsbetiae_contig19.5586.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=450bp
MVSFATVASVALCLTPSSGFMTMVTSIPKPVASSPTVSAPPVFTKDFALP
MQMPEESIAGVMEVMRSGRLNRYSSASAETSQVAQLEQDVVEFCSKGTGD
GVRFALGVNSCSSAILIALLGVGVQPGDEVLSNAFTFTAVPSAILRTGAK
PVLVECKDSWVMDLDDLEKKAVASKAKVLLLSHMRSKVCDMDRLYEICDK
HGIAVVEDCAHALGVTWRGEQLGNRAKAAAYSCQSDKLINSGEGGFLTTN
DEELFSRAIYMSGCYEMRYGKHSLRASDELMEKAMLSERNLSVRMTELVG
AVIRPLLANLPQRMEQFSRRYHEVVGVLEKEVPDLIEVPKPLEHATTVGD
HLNFHLVNPTEEENLAFQAKTKEMGVPLNWLRSKVNARWHVNWRGYGGPV
QDLPATDAALASAYDLKLPPHFDDEDFEHIAKNIAYAARVTVRAGEQQE*
back to top

mRNA from alignment at L-elsbetiae_contig19:38173..47218-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig19.5586.1 ID=mRNA_L-elsbetiae_contig19.5586.1|Name=mRNA_L-elsbetiae_contig19.5586.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9046bp|location=Sequence derived from alignment at L-elsbetiae_contig19:38173..47218- (Laminarionema elsbetiae ELsaHSoW15)
GCTCATATATTGGTGACTGCATGCTGCCTCCCCGCCTCCACATCAATTCC
TTCGCGATAAAGTACCACCCGTCTCCAACCACAGCACACCATGGTATCGT
TCGCGACCGTAGCTTCAGTGGCCCTGTGCTTGACGCCGAGCTCTGGGTTC
ATGACCATGGTAACCTCCATCCCCAAGCCGGTGGCATCTTCACCGACCGT
CTCCGCTCCACCGGTGTTCACGAAGGACTTCGCTCTGCCCATGCAAATGC
CGGAGGAGAGCATTGCAGGGGTTATGGAGGTGATGCGCTCCGGTCGCCTC
AACAGGTACAGCTCGGCGTCCGCTGAAACATCCCAGGTTGCGCAGCTCGA
GCAAGACGTTGTGGAGTTCTGTTCCAAGGGGACTGGAGATGGTGTCCGCT
TTGCTCTTGGGGTCAACAGTTGTTCAAGCGCGATCCTCATTGCCCTACTC
GGCGTCGGCGTCCAGCCCGGAGACGAGGTCCTAAGCAATGCGTTCACGTT
CACAGCCGTGCCATCAGCCATCCTCAGGACCGGCGCGAAGCCGGTGCTCG
TGGAGTGCAAGGATAGGTGAGCGCATGAAGCACGAATCTGCGAATTTTCT
ACCATACATCGTAGGTACGTTTTACAACGGTGCGGCAAAATCGGTACGCT
GGAGACGCGAACATTTTCTCACCCAGGACAACGATGTTATATCATCGGCG
GTGATTTAATAACGCCCATGCAGCCCTGGTTGCGCGTTAGCAATACGTCG
GAAATCGGTTCACCCCAGAGAGCGATTTTTTAATCTGTGAGACCCTTTCG
CTCTCTCTTGTTGCTTCCCGTCTTTGTCTTCTCTTTCTCTCTCTTTCTCT
CTCTCTTTCTTCGAAACATGTTGACACATTGCACAACGTGTGGCGAGAGC
GGGCGCCTTTGCTGGCGCTCACACACACAAGACTCTTTGAAGTGTTCCAT
TGTTATGTTTCTGTGATGAAAATGTATAGTGCTCCCGAGGTTTTCCGGGC
CGTGCGGAGCATCGGAGCGTTCTCTTCTCGAGAGAACAAACCCACCAGGT
GTATCTACATTTTTTGCGATTTTGCGATCGCCCCATGAGCAGCAGACGCG
CAGCAAACCTTTCACAAGCTGCCCGCCAAACACACCACCCTACCTCTGTA
CACGTGCAAGCCGGTGAATCGCATGCACGCAAGCGGAACAGGTTTTCGTA
GGCAGAATGTCATGAATTTTCATTTTGGGCACAGGTGAACGTTCGTTGTT
TCGACAGCCGAAGGGGCGGGTGCGCGTAAAATGCGGCGGGCGTGTGCTCA
GCCAACACTGGGCCCTGCGAGAGAAAAGGAGAGAGAGAGACCTCCCAGCT
TTTCTGGCATGTTTTTAACGTCGCTCACACCAATGGCTCCTGCGCTTGCC
TTCAAGAGGTACATCTATCTGTAACAACACAGAACAATCTACTCGAAAAT
AGATACAGAACGTACGAAACGTACGAAACGCGTTCGTTTACGCGGTTGGT
GCGAACGGGCCTGGTTGGTTGTTTTGAGCGTTTGCTCGACTCTTTTCCTC
CCTTCCGCAGATATTAACCTGGCCCATCAGAAACCACGCGGTGTCTAGCA
AATAGTTCGCATGGGATATTGTGCTTGTTGTACCTCGAAGTGGTCGTTCC
CTTGCTATGTACTTGCGTTGAAGTTCACGGGCCGAAATTTCGAAATTTCG
TGGTCAGAAATGTTGGGGAATGACGCCACAAATCGGAGATTACATCGTAC
GTGGATGGTCTATTTATTGTCCACATGCGTGTAAATACATCAGCTCAAAT
ACATCCTCAGTCGACAGCGCTTGATTCTGTTGTTGAGGCCCTTTGTTGAA
GTTTCGAGCCAGAGAGAAAAGCCCCGGTCTCGGCACATTTTGGCCGAGGT
ATTTGATTGTTTTTGGGGCTCTTGGTTGAACTTTTGAGACAGAAAGCAAA
AAACTGGAGCGAAAAGTCCCAGTCTCAACACGCCAGATGCGCAAATGCCA
ACTTCGATTTCGAGTATCTATATATACCTATCGGGTTTGTGATCTTTAGA
CCCTTCGTGAAGCAAGGGCTACTACCTACACAGCTGGCGCCCTCGATGTT
CTCGCTGCTTTCCTTCGTACTTGATGGACGAGGAAGATTACCAGTGATAC
GACCTCCGAGTCTGTCTGTTTGGTTCGGTAGGTATTACACATACTCCTTT
CACCTTCTCCGAAATTCCTCTTGCTACGATACAGCTTCATGAAATTTCAC
ACAGCAGCAGTTACACTTGCTTCCTCAAGCAGTAGTAACCCAAACCGATG
TATCCCGGCCATCGAACAAGACAAGACCACCGCCTAACCGTGGAGGTTAC
TCCAGGTTGGCCTGGCAGAGTTGTGCTGAGGATGTGTTGGAACTATTATA
GTATTGGTGTTTTTCTGTGTACTCGGTCGGGGACTAATATTACACTACTT
ATGACTGGTACGGAACTAAAATTAGTAAGACCGGTTTTTATGCGCGCACA
CAGTTTATTTTGAGAAAAAATGTTTGTCGTATGTTGGACACTTTTTCATC
GCCAAGAGCTCGGAATCGTGCCTGCGCACCTCGAGAACAATTGAAGCTCT
CGTCCAGAGGTTTATACATCTCCTGCCCATTCTGGCAGGCTTAACGTTTG
ATTTTTCGTCGAGGAGCAAGATATGGCAACATTGTGCCAATTGCAACAAA
AACGTAAGATTCGGGGTACAACCGAATCTGTGTTTTGTGGAAGCGGATTG
GAAATTTCCTGAAATACGAGAGGAGACAGCCCGGAAAAAGAGTCCGAGAG
AAGGCAAAGTGTTTTTTGATCCTCGGCCGAGGACCAGAAGAGAGAGTGTT
TGCAGTGCCCCAAAGAGGCAAGGAGAGAGAGCAGCAGCAGCAGACTAGAG
GCGTTTGCGTCTGGGACTTGATCGATTTTCCCACCCACCCGCCCTATGGC
TCAAGAAGGAGGGATCAATGGGTTAAGAGAGTTAAATATAGAGTTATCAT
TAACCAGATTTGTTCGTTTGTTTGTTTATCTTGTGGATGATTTTCGCTGA
AGTCGGGTTGGCCCGATATGGTTGGATTTTATATGGTTTTTGATTTCCGT
TTTCGGCATCTGGTTTCATTTCGTTTTTCGTTTTTTTTCTGATCCAAATT
TCTTGAGCAAAACACAAATAGCCTGTTCGTGCAAAAGTTTGCAAACTTTT
CGCCCGAAAATGCTTTTCTGGCGAAAAGTTGTCAAAATGTTGCCTCTCTT
GCTCCTCGACGAAAAATCAAACTTGAAGTCTGCCAGAATGGGCAAGAGAT
CTAGAAACCTCTGGACGAGAGCTTCAATTGTTCTCGAGGTGCGCAGGCAC
GATTCCGAGCTCTTGGCGATGAAAAGTGCCCAACAATACGAAAAAAACAA
CTTTTCTCAAAATAAACTAACTGTATGTATGCTCCCATAAAAACCGGTGT
AACGGAGTCCCGTTTCGTTTGTGGTTCTTTGTTCCATTTCCTTGTTTAAT
TTTTTAAATAATACGAAGTACATATTACCTACAAACCTTTGTCAAAACTT
TGGACTGATGACCTTTGCCCCCCCCCCCCCTTTGTGTTCATGTCTACGTA
TTTCAGCTGGGTTATGGACCTGGATGACCTCGAGAAGAAAGCGGTCGCCA
GCAAGGCCAAGGTTCTCCTTCTGTCCCACATGCGGAGCAAGGCGAGTTTC
TATTCTACACTGCTGCCTTACCGGCAGTGGAAAAACACAAAAAACACGCT
CCCAAATTTGGTTACCTTGTACCTAGGACAAACGGTCCGTCACAAAGTAC
ACGGCAGTAGTATTATTGTAGGTAGGCAGTAAATTAGTCCCTTTCGATAA
GGCAAGCACAAAAAACAATCCCTGACGGAAGGAGGGTACGGTTTGCCGAC
GTGTTGCTCTGTTTCTCGCACATGCGACACCGAACTGGAGAGAAGCCTTG
CACGAGCCCTGTTTTGTTGTGGAATCATGTACTAAAAAGCCTACAAGATC
ATTTTCTACCCTTTGCTCGATGGATTGCCACGCGACGGCGATCACGGCAG
GTGTGTGACATGGACCGCCTGTACGAGATCTGCGACAAGCACGGCATCGC
CGTCGTCGAGGACTGCGCCCACGCCCTCGGCGTCACGTGGCGTGGCGAGC
AGCTGGGAAACCGCGCCAAGGTCAGCTTTAGCTTTTGTTTTTTTCCCCGA
CAGTGGCTTTTTGTTTCTTTGTTTTTCGTGTGTTGTGAGGGTACCTTCTA
TCTGTCTGTCTGCGAGTATTTCTTGATGTCGTTGGCAACCGCAACCATTC
CGGCTTTGTCCCGCTACTGCTGTAACGTGCTCTCATACACATGTATAAAT
ATACGCTGCTTGTACAGCAGTGCTTGGAGCATGGATCCCCTCCCGTCCCA
TGACATGGACCCGGCTAGTTTCATCCACGTTGTTGTTGTTCCGTGCGGGG
TCGTGCGTGCGCAACTTCGGCTCCAGAGAGGGTGTAGGGGTTCGTGAGTT
TTGGCCCCATGTGTTGTTGGTGGTTTCTGCTTGTAAGTAATATGGCACAA
TTTTGCAGGTGTCAAGGCGTTAGATATTGTCGTAGGCGTTTTGTGTGTGA
GTATACTCGGAGGTTTCGCTGCGGTGCTTTTGTGTCGCCTGCGCAACGAC
ATCCGTTTCGTTTGTACCTGTATTATATACTTCTATTGTATATATACGGC
GTACGTTGCTTCGCCCACGTCGCTCTCACCTCCTTTCTTACGTACTTATT
TATGTGTGTACGTATCGCTCTCTTTGATGTCATGTGCCTTTTGCCGGGTT
TTGTCGCCCGCCGTTCGTGTGCAGGCGGCTGCGTACTCTTGCCAGTCTGA
CAAGCTCATCAACTCCGGGGAGGGCGGATTCTTGACCACCAACGACGAGG
AACTCTTTTCCAGGGCCATATACATGTCGGGCTGCTACGAAATGCGCTAC
GGTAAGAGGACCCGCACCACTCGCCACAGAAGTATCTGTCGTCGTACAAC
AGTAGTCCATTTACCAGCGGCAGAACATTACGAGGTAACGCGTGATTGAT
TGCAACGGAGTTTCAATCAGCCCCATGGCCGGATGGATCTCTGAATATGT
GTGTATATACATACGTGCGTAAATCAATGTGTAGGTTGGTTTGCTTTGTC
TGCGCTGGGCAAGGGCGCAGGTACATATGTACAGGATACAATCAATGATA
TACTTGTTTTACTGTTTCATCATCCCTCTCCCTGCCCTGCAATACTTCGT
TTCAGGCAAGCACTCCCTCCGCGCGTCGGACGAGCTGATGGAAAAGGCCA
TGCTATCCGAGCGAAACCTCAGCGTTCGCATGACCGAGCTAGTCGGCGCC
GTCATCCGGCCCCTGCTCGCCAACCTCCCCCAGAGGATGGAGCAGTTCAG
CCGTCGCTACCACGAGGTGAGAACAGCTCCAGAATGGTCTCGCGATACTG
CTGTATTAGGATGACATGTAGAGCAAAACAGCGGTGCGGGTTCTGGATTC
AAGAAGGGATGATGGAGCAAGACTTCGGACACGATTCGTTCAATAGGTGA
TGCGGAGTATGCTACTTTTGACATGAGATATATACCACACACCCCGAAGC
ATGCTGCGTTGGATTCACGGAGCTCCCTTTTTGGCATCGTGTGGCAACGG
ACGCGTTTCCACACGCCAAACGTACACACACGAGCATTCAAATCAGACAT
CGTCGTGTGTGGCTCGTACTTCGCCCGCGATGAAGACGCGTGTTTTTGGC
GCCGTTGCCACAATGTAGTATCACGCCCGTCAGGAGTGCAGCGGCAATGG
TGAGAATCGGTGTTGGGAATGCACCCTCGCTCGGCGGCGTAGAGATATAG
ATATCTCCGCCGTGTTTTGTCACATCCCTTCCAGAGGACTTGTTTGGCAG
CAGCAATCTCTTGGCAACAGATACATCACACCCCTCCCCTGTCGGTTTAT
AACACCCCTTCAAGGACTTGTTTAGCAGCAGCACTCGGTTGTCATACACT
GTATTGTATTGCACCCATTTTACCACACACCCTTGTTTTTCATCACACAC
CCTGAGTGCGGTCTCCACGACATACGCTCTTTTATCACACCGGTGACATA
CATAAGATAACACACACCCTTCCACAAAAAACACACCCTCTGTGATGAGA
TTTTCAAACCCAAATTTGTTGTCGAAGGGGTGTCTTATCTTGTGTGTTTC
ACCTGCGGTATTTAACTAGCGAGAGAGAGAGGCACGGGACCAGGTTTGTG
TTGTGTGTTTTTTGTCGTCAATCGCGATTTCGAAACTCAGCAACTTTCCC
CCATCCGCGCGCACGGCGTTGCGGCGTTTCCCCCGTCTACGCGCGGTCCA
CGCGCGATCTATCCAGGTGGTGGGTGTACTGGAGAAGGAGGTGCCCGACC
TCATCGAAGTGCCGAAGCCCCTGGAGCACGCCACCACCGTCGGCGACCAC
CTCAACTTCCACCTTGTCAACCCGACCGAGGAGGAGAACCTTGCCTTCCA
GGTAAAAGTGCCTGTCGACGGACGACCCCTGGCTTTCTTGCCGCGCCGAC
GTGTACGAAGTTCATACATATTTTACCCCCATCGCAGCAGTTGGGGACGC
GCTCGAGGCTAGGGGATGGATGTCCGGATGGGTGCTGCAGCGGATGTGGT
CACTGCTGAAACGATGGCAATTTCTTGATGCCTGGCGTGCATTTATCCGG
TTTGACTAATTGGCCAGTTTGCCAACATGCTGTTGTGCATACGTCCCGAA
ACCCGATATTTATTTTAAATGTTGATGTGTTTTTTTCAAGCCCCCGTGTG
CTTCGACCACGCTGAAAGGGCCGAGAACACTCCGAAGGCGGCGGCCGCAA
CGGTAACGGCGGCGACGGTACCCGCCTCCGGCACCCGTGAGAGGACCGTC
CGCCTACATGCATACCTCCCGAACGGGGCCGACAGAGTCGATAGATAGAT
CACCGCCAAGAAAATCGGTCGTCTCTTTCCGCAAATGATTTGTCGTGACC
AACGTCGTTTCTCGCCCCCCTTCCCCCCTCCCCCTCCGAATGAATGAATG
GCCGCCGTGAACAGGCCAAGACGAAGGAGATGGGTGTGCCCCTCAACTGG
CTGCGCTCAAAGGTGAATGCTCGCTGGCACGTCAACTGGCGCGGATACGG
CGGTCCCGTCCAGGATTTGCCCGCCACCGATGCCGCCCTCGCCTCGGCCT
ACGACCTCAAGCTTCCTCCCCACTTCGACGACGAGGACTTCGAGCACATC
GCCAAGAACATCGCCTACGCGGCCCGCGTGACCGTGCGCGCAGGCGAGCA
GCAGGAGTAAAGGGAGATCAAAATACTTCTCGGCGACCGGGCTGGTCTCC
GTGCACGACATGATTCGCTTTCGCCCTTGGAGACATGATGGGCGGACACT
TGAATTTTCTTCGACCGTATAGAGGACAGCAGTACTGAGCTACACGTGCA
GAAGCGATTTGGTTGTTCTTGGGGGTGATTCTTATGACAGGTTGGCCCTT
CAGGAAGTGTTTGGTTAGAAGCGGGTATGGTACTTCAGCAGTTGGCTTGA
CTGGGGGGGGGATAGAAGTATCCATTGATAGAAAAGAGTCGTCAGGCAAG
AGCATAGAAGGGGGGCGAGGTACAGAAGCTAGCGGAGATGTTGCGAGTTT
TGTTGATTTTGGAAAATTAACCTCGGTTTGTCTTTTCTCTTTTTGGAACC
TTCAAGTTCAGAGATGTTGCGCGCGCTTTTACTCGTCTTTTGCCATGGGT
CGCATCTGCAGAGGCGATTTCACTTCTCCGAGCCACCAACCACAGTTTTG
ACACCGATGAAAGGTGAAGAGCTCCTCTCAAAACTCTCTTACGAATGTTT
CTAAGGAGGAGAGTTGGCGCGAGATACGTACCGGCATAACCTGGACGAAA
GGTCTTTGCAAGAAGATGCGTACGTAGCGCATCGCTTCGAAGGCGCATTA
TTTCTGATTGAAAAAGAGGAAGACGATTCGCGTGTTTTATGTTCAAGTAG
GCAATGGCCGGTAAGTTTAATGTATGGTCGGTGTGTTGCGGTATGTTTGT
GGGCTTGGGGGGCTGTTTGTTTGGAGGTCTTGGGTTCCGTTCGTTCTCAG
GCCCTTTGTCAGGGGCCAGAGGCGGCTGGCAAGTGTTGTTCAGCGCGTGT
TGTTCTATCTACTCCGTGGCTGCGGTCGTGTGCGCAAGGGTGTGAACGAC
GTGGTTTAGAGCAGGGCGGAAGGAAGGCGAACCTTTATCGGCTGCCAAGG
TGTTGTTTTTTTGGCGCCAGCTCGCACCCTACGGCCGGGCAGATATGCCA
CTGCCACGTTTGTTCTCATGGGTATGTTATGTGTTTGGAGGATGTTGGAG
CCCAGTTTGAGAGGTCCGATGTGAGGCTGGCTGCGTTCAACCCACCCTGA
GTACGAGTGGCGGTTCGACGGAGGGTGTGGTGTTGAGAGTGTGAGAACGA
AGGGATGTTTGGTGGAATGATCAGGTGCCCCAGGTTGATGGACCGTATGC
TGCTCGTTCATGGTTGGTTTGTGTTTTGAGGAGAGAGAGTGTGGTGTGGT
GGGCGGACGGGGTTCTGAAATTTCCATTGCATATTTTGGGCTGTGAGTTC
GATGAGCTTGCAAGGCTATCCATCAGAAACCCAAGAAGTGGTGTGCAGGA
GAAGGATTGATACGTGCAGGTGGATGGACAGCGAGTGAGGGAGGTCCGAT
GTACATATTTGCTGGAGAAGATTTTCGTGGCGATATCACAAATGGGCTCG
TGATCGCAGAAGATGCGTCTTGTAGTACTGGCGATGTGGCTGTCGTGGTG
TGTTGGAGATCGGATGGCGGATCTAGTTGGCAAAGAGCAAAGTTTGTACA
CGGCAGTACACATCACATGGGGCGTAGGCGTGGGGGATATCGAGAATTTG
GTTTTTGTGTGGTTGTGGGATTCGGCGAGGTTGCCGGTATAATGAGGCGG
TTAGAGCATATATGTTGGTGTATAGTAAGATAGCCTTTTCGTAGATTCGT
TGAGCGAAAATAGATATACTAAATTTAAGAGCTTCGTGTCGCGGCG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig19:38173..47218-

>mRNA_L-elsbetiae_contig19.5586.1 ID=mRNA_L-elsbetiae_contig19.5586.1|Name=mRNA_L-elsbetiae_contig19.5586.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2700bp|location=Sequence derived from alignment at L-elsbetiae_contig19:38173..47218- (Laminarionema elsbetiae ELsaHSoW15)
ATGGTATCGTTCGCGACCGTAGCTTCAGTGGCCCTGTGCTTGACGCCGAG
CTCTGGGTTCATGACCATGGTAACCTCCATCCCCAAGCCGGTGGCATCTT
CACCGACCGTCTCCGCTCCACCGGTGTTCACGAAGGACTTCGCTCTGCCC
ATGCAAATGCCGGAGGAGAGCATTGCAGGGGTTATGGAGGTGATGCGCTC
CGGTCGCCTCAACAGGTACAGCTCGGCGTCCGCTGAAACATCCCAGGTTG
CGCAGCTCGAGCAAGACGTTGTGGAGTTCTGTTCCAAGGGGACTGGAGAT
GGTGTCCGCTTTGCTCTTGGGGTCAACAGTTGTTCAAGCGCGATCCTCAT
TGCCCTACTCGGCGTCGGCGTCCAGCCCGGAGACGAGGTCCTAAGCAATG
CGTTCACGTTCACAGCCGTGCCATCAGCCATCCTCAGGACCGGCGCGAAG
CCGGTGCTCGTGGAGTGCAAGGATAGATGGTATCGTTCGCGACCGTAGCT
TCAGTGGCCCTGTGCTTGACGCCGAGCTCTGGGTTCATGACCATGGTAAC
CTCCATCCCCAAGCCGGTGGCATCTTCACCGACCGTCTCCGCTCCACCGG
TGTTCACGAAGGACTTCGCTCTGCCCATGCAAATGCCGGAGGAGAGCATT
GCAGGGGTTATGGAGGTGATGCGCTCCGGTCGCCTCAACAGGTACAGCTC
GGCGTCCGCTGAAACATCCCAGGTTGCGCAGCTCGAGCAAGACGTTGTGG
AGTTCTGTTCCAAGGGGACTGGAGATGGTGTCCGCTTTGCTCTTGGGGTC
AACAGTTGTTCAAGCGCGATCCTCATTGCCCTACTCGGCGTCGGCGTCCA
GCCCGGAGACGAGGTCCTAAGCAATGCGTTCACGTTCACAGCCGTGCCAT
CAGCCATCCTCAGGACCGGCGCGAAGCCGGTGCTCGTGGAGTGCAAGGAT
AGCTGGGTTATGGACCTGGATGACCTCGAGAAGAAAGCGGTCGCCAGCAA
GGCCAAGGTTCTCCTTCTGTCCCACATGCGGAGCAAGCTGGGTTATGGAC
CTGGATGACCTCGAGAAGAAAGCGGTCGCCAGCAAGGCCAAGGTTCTCCT
TCTGTCCCACATGCGGAGCAAGGTGTGTGACATGGACCGCCTGTACGAGA
TCTGCGACAAGCACGGCATCGCCGTCGTCGAGGACTGCGCCCACGCCCTC
GGCGTCACGTGGCGTGGCGAGCAGCTGGGAAACCGCGCCAAGGTGTGTGA
CATGGACCGCCTGTACGAGATCTGCGACAAGCACGGCATCGCCGTCGTCG
AGGACTGCGCCCACGCCCTCGGCGTCACGTGGCGTGGCGAGCAGCTGGGA
AACCGCGCCAAGGCGGCTGCGTACTCTTGCCAGTCTGACAAGCTCATCAA
CTCCGGGGAGGGCGGATTCTTGACCACCAACGACGAGGAACTCTTTTCCA
GGGCCATATACATGTCGGGCTGCTACGAAATGCGCTACGGCGGCTGCGTA
CTCTTGCCAGTCTGACAAGCTCATCAACTCCGGGGAGGGCGGATTCTTGA
CCACCAACGACGAGGAACTCTTTTCCAGGGCCATATACATGTCGGGCTGC
TACGAAATGCGCTACGGCAAGCACTCCCTCCGCGCGTCGGACGAGCTGAT
GGAAAAGGCCATGCTATCCGAGCGAAACCTCAGCGTTCGCATGACCGAGC
TAGTCGGCGCCGTCATCCGGCCCCTGCTCGCCAACCTCCCCCAGAGGATG
GAGCAGTTCAGCCGTCGCTACCACGAGGCAAGCACTCCCTCCGCGCGTCG
GACGAGCTGATGGAAAAGGCCATGCTATCCGAGCGAAACCTCAGCGTTCG
CATGACCGAGCTAGTCGGCGCCGTCATCCGGCCCCTGCTCGCCAACCTCC
CCCAGAGGATGGAGCAGTTCAGCCGTCGCTACCACGAGGTGGTGGGTGTA
CTGGAGAAGGAGGTGCCCGACCTCATCGAAGTGCCGAAGCCCCTGGAGCA
CGCCACCACCGTCGGCGACCACCTCAACTTCCACCTTGTCAACCCGACCG
AGGAGGAGAACCTTGCCTTCCAGGTGGTGGGTGTACTGGAGAAGGAGGTG
CCCGACCTCATCGAAGTGCCGAAGCCCCTGGAGCACGCCACCACCGTCGG
CGACCACCTCAACTTCCACCTTGTCAACCCGACCGAGGAGGAGAACCTTG
CCTTCCAGGCCAAGACGAAGGAGATGGGTGTGCCCCTCAACTGGCTGCGC
TCAAAGGTGAATGCTCGCTGGCACGTCAACTGGCGCGGATACGGCGGTCC
CGTCCAGGATTTGCCCGCCACCGATGCCGCCCTCGCCTCGGCCTACGACC
TCAAGCTTCCTCCCCACTTCGACGACGAGGACTTCGAGCACATCGCCAAG
AACATCGCCTACGCGGCCCGCGTGACCGTGCGCGCAGGCGAGCAGCAGGA
GTAAGCCAAGACGAAGGAGATGGGTGTGCCCCTCAACTGGCTGCGCTCAA
AGGTGAATGCTCGCTGGCACGTCAACTGGCGCGGATACGGCGGTCCCGTC
CAGGATTTGCCCGCCACCGATGCCGCCCTCGCCTCGGCCTACGACCTCAA
GCTTCCTCCCCACTTCGACGACGAGGACTTCGAGCACATCGCCAAGAACA
TCGCCTACGCGGCCCGCGTGACCGTGCGCGCAGGCGAGCAGCAGGAGTAA
back to top