mRNA_L-elsbetiae_contig18821.5518.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig18821.5518.1
Unique NamemRNA_L-elsbetiae_contig18821.5518.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig18821.5518.1 vs. uniprot
Match: D8LGL7_ECTSI (Protein kinase domain-containing protein n=3 Tax=PX clade TaxID=569578 RepID=D8LGL7_ECTSI)

HSP 1 Score: 150 bits (380), Expect = 7.900e-43
Identity = 71/75 (94.67%), Postives = 74/75 (98.67%), Query Frame = 1
Query:    4 LNTSRVYADVNVHRPREYWDYESLVVNWGDQEDYEVVRKIGRGKYSEVFEGMNVLNNTKCVIKILKPVKKKKIKR 228
            ++ +RVYADVNVHRPREYWDYESLVVNWGDQEDYEVVRKIGRGKYSEVFEGMNVLNNTKCVIKILKPVKKKKIKR
Sbjct:    1 MSRARVYADVNVHRPREYWDYESLVVNWGDQEDYEVVRKIGRGKYSEVFEGMNVLNNTKCVIKILKPVKKKKIKR 75          
BLAST of mRNA_L-elsbetiae_contig18821.5518.1 vs. uniprot
Match: A0A7S2Y1K0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1K0_9STRA)

HSP 1 Score: 147 bits (371), Expect = 1.250e-41
Identity = 67/75 (89.33%), Postives = 74/75 (98.67%), Query Frame = 1
Query:    4 LNTSRVYADVNVHRPREYWDYESLVVNWGDQEDYEVVRKIGRGKYSEVFEGMNVLNNTKCVIKILKPVKKKKIKR 228
            ++ +RVYAD+NVHRPREYWDYESLVVNWGDQEDYEV+RKIGRGKYSEVFEG+NV+NNTKCVIKILKPVKKKKIKR
Sbjct:    1 MSRARVYADINVHRPREYWDYESLVVNWGDQEDYEVIRKIGRGKYSEVFEGVNVVNNTKCVIKILKPVKKKKIKR 75          
BLAST of mRNA_L-elsbetiae_contig18821.5518.1 vs. uniprot
Match: A0A6U0SL29_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0SL29_9STRA)

HSP 1 Score: 143 bits (360), Expect = 4.490e-41
Identity = 65/75 (86.67%), Postives = 72/75 (96.00%), Query Frame = 1
Query:    4 LNTSRVYADVNVHRPREYWDYESLVVNWGDQEDYEVVRKIGRGKYSEVFEGMNVLNNTKCVIKILKPVKKKKIKR 228
            ++ +RVYADVNVHRPR+YWDYE+L VNWGDQEDYEV+RKIGRGKYSEVFEG NV+NNTKCVIKILKPVKKKKIKR
Sbjct:    1 MSKARVYADVNVHRPRDYWDYEALTVNWGDQEDYEVIRKIGRGKYSEVFEGANVVNNTKCVIKILKPVKKKKIKR 75          
BLAST of mRNA_L-elsbetiae_contig18821.5518.1 vs. uniprot
Match: A0A7J0GH90_9ERIC (Casein kinase II, alpha chain 2 n=1 Tax=Actinidia rufa TaxID=165716 RepID=A0A7J0GH90_9ERIC)

HSP 1 Score: 138 bits (347), Expect = 1.460e-40
Identity = 62/75 (82.67%), Postives = 70/75 (93.33%), Query Frame = 1
Query:    4 LNTSRVYADVNVHRPREYWDYESLVVNWGDQEDYEVVRKIGRGKYSEVFEGMNVLNNTKCVIKILKPVKKKKIKR 228
            ++ SRVYADVNVHRPR+YWDYESL V WGDQ+DYEVVRK+GRGKYSEVFEG+NV NN +C+IKILKPVKKKKIKR
Sbjct:    1 MSQSRVYADVNVHRPRDYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVTNNERCIIKILKPVKKKKIKR 75          
BLAST of mRNA_L-elsbetiae_contig18821.5518.1 vs. uniprot
Match: A0A7C8ZR38_OPUST (Protein kinase domain-containing protein (Fragment) n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C8ZR38_OPUST)

HSP 1 Score: 138 bits (347), Expect = 5.810e-40
Identity = 64/75 (85.33%), Postives = 70/75 (93.33%), Query Frame = 1
Query:    4 LNTSRVYADVNVHRPREYWDYESLVVNWGDQEDYEVVRKIGRGKYSEVFEGMNVLNNTKCVIKILKPVKKKKIKR 228
            ++ +RVYADVNVHRPREYWDYESL V WGDQ+DYEVVRKIGRGKYSEVFEG+NV NN +CVIKILKPVKKKKIKR
Sbjct:    7 MSKARVYADVNVHRPREYWDYESLTVQWGDQDDYEVVRKIGRGKYSEVFEGINVNNNERCVIKILKPVKKKKIKR 81          
BLAST of mRNA_L-elsbetiae_contig18821.5518.1 vs. uniprot
Match: A5ARH3_VITVI (Protein kinase domain-containing protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5ARH3_VITVI)

HSP 1 Score: 137 bits (345), Expect = 2.340e-39
Identity = 60/75 (80.00%), Postives = 71/75 (94.67%), Query Frame = 1
Query:    4 LNTSRVYADVNVHRPREYWDYESLVVNWGDQEDYEVVRKIGRGKYSEVFEGMNVLNNTKCVIKILKPVKKKKIKR 228
            ++++RVYADVN+HRPR+YWDYESL V WGDQ+DYEVVRK+GRGKYSEVFEG+NV NN +CV+KILKPVKKKKIKR
Sbjct:    1 MSSARVYADVNIHRPRDYWDYESLTVQWGDQDDYEVVRKVGRGKYSEVFEGINVTNNERCVVKILKPVKKKKIKR 75          
BLAST of mRNA_L-elsbetiae_contig18821.5518.1 vs. uniprot
Match: A0A2P5BZQ0_PARAD (GPCR kinase n=3 Tax=rosids TaxID=71275 RepID=A0A2P5BZQ0_PARAD)

HSP 1 Score: 139 bits (350), Expect = 3.380e-39
Identity = 63/75 (84.00%), Postives = 70/75 (93.33%), Query Frame = 1
Query:    4 LNTSRVYADVNVHRPREYWDYESLVVNWGDQEDYEVVRKIGRGKYSEVFEGMNVLNNTKCVIKILKPVKKKKIKR 228
            ++ +RVYADVNVHRPREYWDYESL V WGDQ+DYEVVRK+GRGKYSEVFEG+NV NN KC+IKILKPVKKKKIKR
Sbjct:    1 MSRARVYADVNVHRPREYWDYESLAVQWGDQDDYEVVRKVGRGKYSEVFEGINVTNNEKCIIKILKPVKKKKIKR 75          
BLAST of mRNA_L-elsbetiae_contig18821.5518.1 vs. uniprot
Match: B8BUK1_THAPS (Protein kinase domain-containing protein n=16 Tax=Bacillariophyta TaxID=2836 RepID=B8BUK1_THAPS)

HSP 1 Score: 139 bits (351), Expect = 9.200e-39
Identity = 65/75 (86.67%), Postives = 71/75 (94.67%), Query Frame = 1
Query:    4 LNTSRVYADVNVHRPREYWDYESLVVNWGDQEDYEVVRKIGRGKYSEVFEGMNVLNNTKCVIKILKPVKKKKIKR 228
            ++ +RVYADVNVHRPR+YWDYE+L VNWGDQEDYEVVRKIGRGKYSEVFEG NV NN+KCVIKILKPVKKKKIKR
Sbjct:    1 MSRARVYADVNVHRPRDYWDYEALTVNWGDQEDYEVVRKIGRGKYSEVFEGHNVGNNSKCVIKILKPVKKKKIKR 75          
BLAST of mRNA_L-elsbetiae_contig18821.5518.1 vs. uniprot
Match: A0A6A1UWW6_9ROSI (Protein kinase domain-containing protein n=1 Tax=Morella rubra TaxID=262757 RepID=A0A6A1UWW6_9ROSI)

HSP 1 Score: 134 bits (338), Expect = 9.490e-39
Identity = 60/75 (80.00%), Postives = 71/75 (94.67%), Query Frame = 1
Query:    4 LNTSRVYADVNVHRPREYWDYESLVVNWGDQEDYEVVRKIGRGKYSEVFEGMNVLNNTKCVIKILKPVKKKKIKR 228
            ++ +RVYADVN+HRPR+YWDYE+L+V WG+Q+DYEVVRK+GRGKYSEVFEG+NV NN KCVIKILKPVKKKKIKR
Sbjct:    1 MSRARVYADVNLHRPRDYWDYEALIVQWGEQDDYEVVRKVGRGKYSEVFEGINVGNNEKCVIKILKPVKKKKIKR 75          
BLAST of mRNA_L-elsbetiae_contig18821.5518.1 vs. uniprot
Match: A0A067GPI4_CITSI (Protein kinase domain-containing protein n=2 Tax=rosids TaxID=71275 RepID=A0A067GPI4_CITSI)

HSP 1 Score: 139 bits (350), Expect = 1.270e-38
Identity = 63/75 (84.00%), Postives = 70/75 (93.33%), Query Frame = 1
Query:    4 LNTSRVYADVNVHRPREYWDYESLVVNWGDQEDYEVVRKIGRGKYSEVFEGMNVLNNTKCVIKILKPVKKKKIKR 228
            ++ +RVYADVNVHRPR+YWDYESL V WGDQEDYEVVRK+GRGKYSEVFEG+NV NN KC+IKILKPVKKKKIKR
Sbjct:    1 MSRARVYADVNVHRPRDYWDYESLTVQWGDQEDYEVVRKVGRGKYSEVFEGINVTNNEKCIIKILKPVKKKKIKR 75          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18821.5518.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGL7_ECTSI7.900e-4394.67Protein kinase domain-containing protein n=3 Tax=P... [more]
A0A7S2Y1K0_9STRA1.250e-4189.33Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A6U0SL29_9STRA4.490e-4186.67Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A7J0GH90_9ERIC1.460e-4082.67Casein kinase II, alpha chain 2 n=1 Tax=Actinidia ... [more]
A0A7C8ZR38_OPUST5.810e-4085.33Protein kinase domain-containing protein (Fragment... [more]
A5ARH3_VITVI2.340e-3980.00Protein kinase domain-containing protein n=1 Tax=V... [more]
A0A2P5BZQ0_PARAD3.380e-3984.00GPCR kinase n=3 Tax=rosids TaxID=71275 RepID=A0A2P... [more]
B8BUK1_THAPS9.200e-3986.67Protein kinase domain-containing protein n=16 Tax=... [more]
A0A6A1UWW6_9ROSI9.490e-3980.00Protein kinase domain-containing protein n=1 Tax=M... [more]
A0A067GPI4_CITSI1.270e-3884.00Protein kinase domain-containing protein n=2 Tax=r... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig18821contigL-elsbetiae_contig18821:2351..2581 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score150.6
Seed ortholog evalue3e-34
Seed eggNOG ortholog2880.D8LGL7
Preferred nameCKA2
KEGG koko:K03097
KEGG Pathwayko03008,ko04064,ko04137,ko04139,ko04310,ko04520,ko04712,ko05162,ko05168,ko05169,map03008,map04064,map04137,map04139,map04310,map04520,map04712,map05162,map05168,map05169
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005829,GO:0005956,GO:0006139,GO:0006259,GO:0006281,GO:0006325,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007154,GO:0007165,GO:0007275,GO:0007623,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009507,GO:0009536,GO:0009628,GO:0009648,GO:0009791,GO:0009987,GO:0010019,GO:0010212,GO:0010225,GO:0010229,GO:0010332,GO:0016043,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0022414,GO:0022607,GO:0023052,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0033554,GO:0034641,GO:0036211,GO:0040008,GO:0042752,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046777,GO:0048367,GO:0048511,GO:0048580,GO:0048583,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051239,GO:0051259,GO:0051260,GO:0051262,GO:0051276,GO:0051289,GO:0051716,GO:0051726,GO:0061458,GO:0065003,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0080134,GO:0080135,GO:0090304,GO:0090567,GO:0140096,GO:1901360,GO:1901564,GO:2000026,GO:2000028,GO:2000241,GO:2001020
EggNOG free text desc.protein serine/threonine kinase activity
EggNOG OGsKOG0668@1,KOG0668@2759
EC2.7.11.1
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko03009
Exons1
Model size231
Cds size231
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815783.442095-CDS-L-elsbetiae_contig18821:2350..25811622815783.442095-CDS-L-elsbetiae_contig18821:2350..2581Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18821 2351..2581 -
1691683099.808067-CDS-L-elsbetiae_contig18821:2350..25811691683099.808067-CDS-L-elsbetiae_contig18821:2350..2581Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18821 2351..2581 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig18821.5518.1prot_L-elsbetiae_contig18821.5518.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig18821 2351..2581 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig18821.5518.1

>prot_L-elsbetiae_contig18821.5518.1 ID=prot_L-elsbetiae_contig18821.5518.1|Name=mRNA_L-elsbetiae_contig18821.5518.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=77bp
FLNTSRVYADVNVHRPREYWDYESLVVNWGDQEDYEVVRKIGRGKYSEVF
EGMNVLNNTKCVIKILKPVKKKKIKR*
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mRNA from alignment at L-elsbetiae_contig18821:2351..2581-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig18821.5518.1 ID=mRNA_L-elsbetiae_contig18821.5518.1|Name=mRNA_L-elsbetiae_contig18821.5518.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=231bp|location=Sequence derived from alignment at L-elsbetiae_contig18821:2351..2581- (Laminarionema elsbetiae ELsaHSoW15)
TTTCTGAACACAAGCAGGGTGTACGCAGATGTGAACGTCCACCGCCCCCG AGAGTACTGGGACTACGAGAGCCTGGTGGTGAACTGGGGGGACCAGGAGG ACTACGAGGTGGTGCGGAAGATCGGCCGGGGGAAGTACAGCGAGGTGTTC GAGGGGATGAACGTGCTGAACAACACCAAGTGCGTGATCAAGATCCTGAA GCCGGTCAAGAAGAAGAAGATCAAGAGGTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig18821:2351..2581-

>mRNA_L-elsbetiae_contig18821.5518.1 ID=mRNA_L-elsbetiae_contig18821.5518.1|Name=mRNA_L-elsbetiae_contig18821.5518.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=462bp|location=Sequence derived from alignment at L-elsbetiae_contig18821:2351..2581- (Laminarionema elsbetiae ELsaHSoW15)
TTTCTGAACACAAGCAGGGTGTACGCAGATGTGAACGTCCACCGCCCCCG
AGAGTACTGGGACTACGAGAGCCTGGTGGTGAACTGGGGGGACCAGGAGG
ACTACGAGGTGGTGCGGAAGATCGGCCGGGGGAAGTACAGCGAGGTGTTC
GAGGGGATGAACGTGCTGAACAACACCAAGTGCGTGATCAAGATCCTGAA
GCCGGTCAAGAAGAAGAAGATCAAGAGGTGATTTCTGAACACAAGCAGGG
TGTACGCAGATGTGAACGTCCACCGCCCCCGAGAGTACTGGGACTACGAG
AGCCTGGTGGTGAACTGGGGGGACCAGGAGGACTACGAGGTGGTGCGGAA
GATCGGCCGGGGGAAGTACAGCGAGGTGTTCGAGGGGATGAACGTGCTGA
ACAACACCAAGTGCGTGATCAAGATCCTGAAGCCGGTCAAGAAGAAGAAG
ATCAAGAGGTGA
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