mRNA_L-elsbetiae_contig1844.5356.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1844.5356.1
Unique NamemRNA_L-elsbetiae_contig1844.5356.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1844.5356.1 vs. uniprot
Match: D8LFT9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFT9_ECTSI)

HSP 1 Score: 471 bits (1213), Expect = 5.470e-166
Identity = 242/267 (90.64%), Postives = 252/267 (94.38%), Query Frame = 1
Query:    1 MSEQPSFLASLVAGGMAGTAVDVALYPLDTIKTRLQSPDGFIKAGGLRGVYNGLSAAAVGSAPGAALFFSSYEAAKHALDPKSPFSHMAAASVAETIACLVRVPTENVKQKMQAGLHGTATETVNAILKSGGMRGFYTGYLTTVVREIPFSFIQFPIYEWLKVTWATRRGGPLESYEAAGCGSVSGAFAAAVTTPMDVVKTRLMLGADKHGAAYRGLGDTFRRVYTEEGAAALMSGVTPRVTWIGIGGFVFFGVYEGSKRQLMGLGV 801
            MSEQPSF+ASL+AGGMAGTAVDVALYPLDTIKTRLQSP+GF+K+GGLRGVYNGLSAAAVGSAPGAALFFSSYEAAKHALDP SP +HMAAASVAET+ACLVRVPTENVKQKMQAGLHGTATET+NAILK+ GM GFYTGYLTTVVREIPFSFIQFPIYE LK  WA RRGGPLE YEAAGCGSVSGAFAAAVTTPMDVVKTRLMLG DKHG  YRGLGDTFRRVYTEEGAAALMSGVTPRVTWIGIGGFVFFGVYEG+K  LMGLG 
Sbjct:    1 MSEQPSFVASLLAGGMAGTAVDVALYPLDTIKTRLQSPEGFVKSGGLRGVYNGLSAAAVGSAPGAALFFSSYEAAKHALDPDSPLAHMAAASVAETMACLVRVPTENVKQKMQAGLHGTATETMNAILKNSGMMGFYTGYLTTVVREIPFSFIQFPIYEGLKAAWAKRRGGPLEPYEAAGCGSVSGAFAAAVTTPMDVVKTRLMLGTDKHGETYRGLGDTFRRVYTEEGAAALMSGVTPRVTWIGIGGFVFFGVYEGAKTWLMGLGA 267          
BLAST of mRNA_L-elsbetiae_contig1844.5356.1 vs. uniprot
Match: A0A835YJ97_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ97_9STRA)

HSP 1 Score: 355 bits (911), Expect = 5.230e-120
Identity = 184/269 (68.40%), Postives = 215/269 (79.93%), Query Frame = 1
Query:    1 MSEQPSFLASLVAGGMAGTAVDVALYPLDTIKTRLQSPDGFIKAGGLRGVYNGLSAAAVGSAPGAALFFSSYEAAKHAL-DPKSPFSHMAAASVAETIACLVRVPTENVKQKMQAGL---HGTATETVNAILKSGGMRGFYTGYLTTVVREIPFSFIQFPIYEWLKVTWATRRGGPLESYEAAGCGSVSGAFAAAVTTPMDVVKTRLMLGADKHGAAYRGLGDTFRRVYTEEGAAALMSGVTPRVTWIGIGGFVFFGVYEGSKRQLMGL 795
            M  QPSF+ +LV+GG+AGT+VDVAL+PLDTIKTRLQS  GFIKAGG +GVYNGLSAAAVGSAPGAA FFS+YE  K  L DP +P +HMAAAS AE +ACLVRVPTENVKQKMQAG+     +A  T  +IL + G RGFY GY+TT++REIPFS IQFP+YE +K  W  RRG P+ SY+AA CGS+SGAFA A+TTP DVVKTRLMLGADKHG  Y+G+  TF+R+  +EGAAAL  G+ PRV WIGIGGFVFFG YE SKR L G+
Sbjct:    1 MPHQPSFVLALVSGGIAGTSVDVALFPLDTIKTRLQSSQGFIKAGGFKGVYNGLSAAAVGSAPGAAAFFSTYEGLKVRLGDPSAPSTHMAAASGAEIVACLVRVPTENVKQKMQAGVGTSSSSAVATCRSILSASGARGFYAGYMTTIMREIPFSLIQFPLYERMKAVWGRRRGAPVHSYQAAVCGSLSGAFAGALTTPFDVVKTRLMLGADKHGLPYKGMVPTFQRIVADEGAAALFGGIVPRVMWIGIGGFVFFGAYEASKRTLAGV 269          
BLAST of mRNA_L-elsbetiae_contig1844.5356.1 vs. uniprot
Match: A0A7S1UH46_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UH46_9STRA)

HSP 1 Score: 313 bits (802), Expect = 2.920e-103
Identity = 164/260 (63.08%), Postives = 201/260 (77.31%), Query Frame = 1
Query:   28 SLVAGGMAGTAVDVALYPLDTIKTRLQSPDGFIKAGGLRGVYNGLSAAAVGSAPGAALFFSSYEAAKHALDPK---SPFSHMAAASVAETIACLVRVPTENVKQKMQAGLHGTATETVNAILKSGGMRGFYTGYLTTVVREIPFSFIQFPIYEWLKVTWA-TRRGGPLESYEAAGCGSVSGAFAAAVTTPMDVVKTRLMLGADKHGAAYRGLGDTFRRVYTEEGAAALMSGVTPRVTWIGIGGFVFFGVYEGSKRQLMGL 795
            SL++GG+AGT VDV L+PLDTIKTRLQ+P+GF+K+GG  G++ G+SAAAVGSAPGA+LFF SYE AK  L+P+   +P +HMAAAS+ E  AC+VRVPTE +KQ+MQA +  TA   +  +L + G+ G + GY +TV REIPFS IQFP+YE LK  WA ++  G L  YE+A CGSVSGAF+AAVTTP+DVVKTRLMLGADK G AY G+  TFRRV  +EGAAAL  GV PRV WI IGGF FFG YEG+K  LMG+
Sbjct:   25 SLISGGVAGTTVDVVLFPLDTIKTRLQAPEGFMKSGGFNGLFKGVSAAAVGSAPGASLFFMSYETAKQNLEPRMESAPVAHMAAASLGEVAACVVRVPTEIIKQRMQANMFPTAQGALRNVLDTEGVLGLWRGYGSTVAREIPFSLIQFPLYEHLKKVWAASKASGELRPYESALCGSVSGAFSAAVTTPLDVVKTRLMLGADKAGVAYDGMASTFRRVVADEGAAALFKGVQPRVMWISIGGFFFFGAYEGTKASLMGM 284          
BLAST of mRNA_L-elsbetiae_contig1844.5356.1 vs. uniprot
Match: A0A7S2Y3T2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y3T2_9STRA)

HSP 1 Score: 310 bits (793), Expect = 4.990e-102
Identity = 165/263 (62.74%), Postives = 201/263 (76.43%), Query Frame = 1
Query:    7 EQPSFLASLVAGGMAGTAVDVALYPLDTIKTRLQSPDGFIKAGGLRGVYNGLSAAAVGSAPGAALFFSSYEAAKH----ALDPK-SPFSHMAAASVAETIACLVRVPTENVKQKMQAGLHGTATETVNAILKSGGMRGFYTGYLTTVVREIPFSFIQFPIYEWLKVTWATRRGGPLESYEAAGCGSVSGAFAAAVTTPMDVVKTRLMLG-ADKHGAAYRGLGDTFRRVYTEEGAAALMSGVTPRVTWIGIGGFVFFGVYEGSK 777
            E+ SFL +L++GG AGT+VDVAL+PLDTIKTRLQS +GF+KAGG RG+Y GLSAAA GSAPGAALFFSSYEA+K       D K +P  HM +ASV ET+ACLVRVPTE VKQ+MQ G +G+  E V+ I+K+ G  GFYTGYLTTV REIPFSFIQFP+YE LK  W+  +G  +   ++A CGS+SG  AA +TTP+DVVKTRLMLG AD HG  Y G+  T +++Y +EG   L +G +PRVTWI IGGFVFFG YE +K
Sbjct:    5 EKNSFLVNLLSGGCAGTSVDVALFPLDTIKTRLQSSEGFVKAGGFRGIYRGLSAAAAGSAPGAALFFSSYEASKEWGTKTFDEKYAPLVHMGSASVGETVACLVRVPTEVVKQRMQTGQYGSFREAVSTIMKTEGPGGFYTGYLTTVAREIPFSFIQFPMYEGLKKYWSEWQGKEVGPSQSALCGSISGGIAAGITTPLDVVKTRLMLGQADLHGVKYEGMLSTLQKIYVQEGMPKLFAGFSPRVTWISIGGFVFFGSYEAAK 267          
BLAST of mRNA_L-elsbetiae_contig1844.5356.1 vs. uniprot
Match: A0A1V9ZD58_9STRA (S-adenosylmethionine mitochondrial carrier protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZD58_9STRA)

HSP 1 Score: 306 bits (783), Expect = 1.530e-100
Identity = 159/267 (59.55%), Postives = 191/267 (71.54%), Query Frame = 1
Query:    4 SEQPSFLASLVAGGMAGTAVDVALYPLDTIKTRLQSPDGFIKAGGLRGVYNGLSAAAVGSAPGAALFFSSYEAAKHALDPK------SPFSHMAAASVAETIACLVRVPTENVKQKMQAGLHGTATETVNAILKSGGMRGFYTGYLTTVVREIPFSFIQFPIYEWLKVTWATRRGGPLESYEAAGCGSVSGAFAAAVTTPMDVVKTRLMLGADKHGAAYRGLGDTFRRVYTEEGAAALMSGVTPRVTWIGIGGFVFFGVYEGSKRQL 786
            S   SF  SL+AGG+AGT+VDVAL+PLDTIKTRLQS  GF+KAGG +GVY GLSAAA GSAPGAALFFS+YE +K  L  K      SP  HM+AA+  ET ACLVRVPTE VKQ MQ G       ++  +  + G+ GFY GY + + REIPFSFIQFP++E LK TW+ +RG  +  ++ A CGS+SG  AA++TTP+DVVKTRLMLG D HG  YRG+ DTF RVYT+EG   L SG+ PR  WI IGGFVFFG YE +   L
Sbjct:    5 SSSKSFFTSLIAGGIAGTSVDVALFPLDTIKTRLQSSQGFLKAGGFKGVYKGLSAAAAGSAPGAALFFSTYETSKEVLQNKLPHLSNSPLIHMSAAACGETAACLVRVPTEIVKQNMQTGALSGFQHSIKTLYAANGIAGFYRGYWSMLAREIPFSFIQFPLWEGLKATWSKQRGEQVSPFQGAICGSISGGIAASITTPLDVVKTRLMLGKDAHGVEYRGMKDTFMRVYTDEGWQTLFSGIKPRTMWISIGGFVFFGAYESASAFL 271          
BLAST of mRNA_L-elsbetiae_contig1844.5356.1 vs. uniprot
Match: A0A067C9P7_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C9P7_SAPPC)

HSP 1 Score: 305 bits (782), Expect = 2.320e-100
Identity = 162/263 (61.60%), Postives = 190/263 (72.24%), Query Frame = 1
Query:   16 SFLASLVAGGMAGTAVDVALYPLDTIKTRLQSPDGFIKAGGLRGVYNGLSAAAVGSAPGAALFFSSYEAAKHALDP------KSPFSHMAAASVAETIACLVRVPTENVKQKMQAGLHGTATETVNAILKSGGMRGFYTGYLTTVVREIPFSFIQFPIYEWLKVTWATRRGGPLESYEAAGCGSVSGAFAAAVTTPMDVVKTRLMLGADKHGAAYRGLGDTFRRVYTEEGAAALMSGVTPRVTWIGIGGFVFFGVYEGSKRQL 786
            SF  SLVAGG+AGT+VDVAL+PLDTIKTRLQS  GFIKAGG +GVY GLSAAA GSAPGAALFFS+YE AK AL         SPF HM AA+  ET ACLVRVPTE VKQ MQ G       ++  +  + G+ GFY GY + + REIPFSFIQFP++E LK TW+ ++G  + + + A CGS+SG  AA++TTP+DVVKTRLMLG D +G  YRG+ DTF RVYTEEG   L SGV PR  WI IGGFVFFG YE +   L
Sbjct:   10 SFFTSLVAGGIAGTSVDVALFPLDTIKTRLQSSQGFIKAGGFKGVYKGLSAAAAGSAPGAALFFSTYETAKEALQTHLPHMANSPFIHMGAAACGETAACLVRVPTEIVKQNMQTGALNGFQHSIKTLHAANGIAGFYRGYWSMLAREIPFSFIQFPLWEGLKATWSAKQGEQVSALQGALCGSISGGIAASITTPLDVVKTRLMLGKDANGVEYRGMKDTFMRVYTEEGWQRLFSGVKPRTMWISIGGFVFFGAYETASASL 272          
BLAST of mRNA_L-elsbetiae_contig1844.5356.1 vs. uniprot
Match: A0A024U5F9_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces TaxID=100860 RepID=A0A024U5F9_9STRA)

HSP 1 Score: 300 bits (767), Expect = 4.340e-98
Identity = 159/263 (60.46%), Postives = 187/263 (71.10%), Query Frame = 1
Query:   16 SFLASLVAGGMAGTAVDVALYPLDTIKTRLQSPDGFIKAGGLRGVYNGLSAAAVGSAPGAALFFSSYEAAKHALDP------KSPFSHMAAASVAETIACLVRVPTENVKQKMQAGLHGTATETVNAILKSGGMRGFYTGYLTTVVREIPFSFIQFPIYEWLKVTWATRRGGPLESYEAAGCGSVSGAFAAAVTTPMDVVKTRLMLGADKHGAAYRGLGDTFRRVYTEEGAAALMSGVTPRVTWIGIGGFVFFGVYEGSKRQL 786
            SFL SL+AGGMAGT VDVALYPLDTIKTRLQS  GF+KAGG +GVY GLSAAA GSAPGAALFFS+YE  K  L         SP  HMA+A++ ET  CLVRVPTE VKQ +Q G   +  E++ +I  + G+ GFY GY + + REIPFSFIQFP++E +K  W   +G  +   + A CGS+SG FAA VTTP+DV+KTRLMLG D  G  YRG+ D F RVYT+EG   L SGV PR TWI IGGFVFFGVYE +   L
Sbjct:   11 SFLTSLIAGGMAGTGVDVALYPLDTIKTRLQSSQGFLKAGGFKGVYKGLSAAAAGSAPGAALFFSTYETTKRFLQQLQPHLADSPVVHMASAAMGETAGCLVRVPTEIVKQNLQTGAFQSFQESIRSIYGTSGVAGFYRGYWSLLAREIPFSFIQFPLWEGMKTAWGHHQGEIVSPVQGAVCGSISGGFAAFVTTPLDVIKTRLMLGKDAQGVEYRGMRDAFTRVYTQEGWQTLFSGVKPRTTWITIGGFVFFGVYEQASATL 273          
BLAST of mRNA_L-elsbetiae_contig1844.5356.1 vs. uniprot
Match: W7TQP7_9STRA (S-adenosylmethionine mitochondrial carrier protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQP7_9STRA)

HSP 1 Score: 292 bits (748), Expect = 6.580e-95
Identity = 156/255 (61.18%), Postives = 183/255 (71.76%), Query Frame = 1
Query:   37 AGGMAGTAVDVALYPLDTIKTRLQSPDGFIKAGGLRGVYNGLSAAAVGSAPGAALFFSSYEAAKHALDPK-----SPFSHMAAASVAETIACLVRVPTENVKQKMQAGLHGTATETVNAILKSGGMRGFYTGYLTTVVREIPFSFIQFPIYEWLKVTWATRRGGPLESYEAAGCGSVSGAFAAAVTTPMDVVKTRLMLGADKHGAAYRGLGDTFRRVYTEEGAAALMSGVTPRVTWIGIGGFVFFGVYEGSKRQL 786
            AGG AGTAVD++L+PLDTIKTRLQ+ +GF KAGG RGVY GL AAA GSAPGAALFFS YE  K   +P      +P  HM AASV ET ACL+RVPTENVKQ +QAG + T  E +  I K  G+ GFY G+L+TV REIPFSF+QFP+YE  K  WA  +G P+   +AA CGSV+GA AAAVTTP+DV+KTRL+L  D  G  Y G+ D FRRV  EEG   L +GV PRV WI IGGFV+FG YE  +R L
Sbjct:   19 AGGAAGTAVDMSLFPLDTIKTRLQASEGFWKAGGFRGVYKGLGAAAAGSAPGAALFFSIYETIKIEAEPLVSDRLAPLVHMVAASVGETGACLIRVPTENVKQNLQAGRYNTNAEALRTIWKQEGVMGFYKGFLSTVFREIPFSFLQFPMYEAAKAFWAQEQGRPVSPLQAAACGSVAGAVAAAVTTPLDVIKTRLILEKDMQGRKYHGIVDVFRRVVAEEGPMTLFAGVAPRVMWITIGGFVYFGAYEEVRRLL 273          
BLAST of mRNA_L-elsbetiae_contig1844.5356.1 vs. uniprot
Match: K3WK77_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WK77_GLOUD)

HSP 1 Score: 291 bits (746), Expect = 7.770e-95
Identity = 151/256 (58.98%), Postives = 186/256 (72.66%), Query Frame = 1
Query:   19 FLASLVAGGMAGTAVDVALYPLDTIKTRLQSPDGFIKAGGLRGVYNGLSAAAVGSAPGAALFFSSYEAAKHALDPK------SPFSHMAAASVAETIACLVRVPTENVKQKMQAGLHGTATETVNAILKSGGMRGFYTGYLTTVVREIPFSFIQFPIYEWLKVTWATRRGGPLESYEAAGCGSVSGAFAAAVTTPMDVVKTRLMLGADKHGAAYRGLGDTFRRVYTEEGAAALMSGVTPRVTWIGIGGFVFFGVYE 768
            F+ SL+ G +AGT+VD+AL+PLDTIKTRLQS +GF KAGG RGVY+GLSAAA GSAPG A+FFS+YE +K+ +         SPF+HMAAA+  E  ACLVRVPTE VKQ+MQ G++ +  E V  I  + G  GFY GY + + REIPFSFIQFP++E LK  W+  +  P+ S++ A CGS++G  AA++TTP+DVVKTRLMLG D  G  Y G  DTF RVY EEG   L SGV PR  WI IGGFVFFG+YE
Sbjct:   15 FIPSLLGGAVAGTSVDIALFPLDTIKTRLQSAEGFFKAGGFRGVYSGLSAAAAGSAPGGAMFFSTYETSKNLIGKNFPEIKHSPFAHMAAAATGEMSACLVRVPTEIVKQRMQTGVYKSIGEAVTGIRAAQGFSGFYRGYWSMIAREIPFSFIQFPLWEGLKHQWSQSQNAPVSSFQGAVCGSIAGGVAASITTPLDVVKTRLMLGKDAKGVQYTGTVDTFTRVYREEGIKRLFSGVGPRTMWISIGGFVFFGMYE 270          
BLAST of mRNA_L-elsbetiae_contig1844.5356.1 vs. uniprot
Match: A0A8K1CHB3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHB3_PYTOL)

HSP 1 Score: 291 bits (746), Expect = 8.310e-95
Identity = 152/261 (58.24%), Postives = 190/261 (72.80%), Query Frame = 1
Query:    4 SEQPSFLASLVAGGMAGTAVDVALYPLDTIKTRLQSPDGFIKAGGLRGVYNGLSAAAVGSAPGAALFFSSYEAAKHAL------DPKSPFSHMAAASVAETIACLVRVPTENVKQKMQAGLHGTATETVNAILKSGGMRGFYTGYLTTVVREIPFSFIQFPIYEWLKVTWATRRGGPLESYEAAGCGSVSGAFAAAVTTPMDVVKTRLMLGADKHGAAYRGLGDTFRRVYTEEGAAALMSGVTPRVTWIGIGGFVFFGVYE 768
            ++   FLASL+ G +AGT+VD+AL+PLDTIKTRLQS +GF KAGG RGVY+GLSAAA GSAPG A+FFS+YE +K A+        +SPF+HM AA+V E  ACLVRVPTE VKQ+MQ G++ +    +  I  + G+ GFY GY + + REIPFSFIQFP++E LK  W+ ++  P+ S + A CGS++G  AA++TTP+DVVKTRLMLG D  G  Y G  DTF RVY EEG   L SGV PR  WI IGGFVFFG+YE
Sbjct:   12 AKSKGFLASLLGGAVAGTSVDIALFPLDTIKTRLQSAEGFFKAGGFRGVYSGLSAAAAGSAPGGAMFFSAYETSKKAIAATFPEHKQSPFAHMGAAAVGEMSACLVRVPTEIVKQRMQTGVYSSLQGAIVGIRTTEGVFGFYRGYWSMIAREIPFSFIQFPLWEGLKNQWSKQQNAPVSSLQGAICGSIAGGCAASITTPLDVVKTRLMLGKDAKGVPYTGTVDTFTRVYREEGVKRLFSGVGPRTMWISIGGFVFFGMYE 272          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1844.5356.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFT9_ECTSI5.470e-16690.64Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YJ97_9STRA5.230e-12068.40Mitochondrial carrier domain-containing protein n=... [more]
A0A7S1UH46_9STRA2.920e-10363.08Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S2Y3T2_9STRA4.990e-10262.74Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A1V9ZD58_9STRA1.530e-10059.55S-adenosylmethionine mitochondrial carrier protein... [more]
A0A067C9P7_SAPPC2.320e-10061.60Uncharacterized protein n=3 Tax=Saprolegniaceae Ta... [more]
A0A024U5F9_9STRA4.340e-9860.46Uncharacterized protein n=9 Tax=Aphanomyces TaxID=... [more]
W7TQP7_9STRA6.580e-9561.18S-adenosylmethionine mitochondrial carrier protein... [more]
K3WK77_GLOUD7.770e-9558.98Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A8K1CHB3_PYTOL8.310e-9558.24Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1844contigL-elsbetiae_contig1844:9112..13758 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score478.4
Seed ortholog evalue2.2e-132
Seed eggNOG ortholog2880.D8LFT9
Preferred nameSLC25A26
KEGG koko:K15111
KEGG TC2.A.29.18
Hectar predicted targeting categorysignal peptide
GOsGO:0000095,GO:0003674,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006810,GO:0006811,GO:0006839,GO:0006855,GO:0008150,GO:0015238,GO:0015805,GO:0015893,GO:0016020,GO:0016021,GO:0019866,GO:0022857,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0042221,GO:0042493,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0051179,GO:0051181,GO:0051182,GO:0051184,GO:0051185,GO:0051234,GO:0055085,GO:0071702,GO:0072348,GO:1901682,GO:1901962
EggNOG free text desc.S-adenosyl-L-methionine transmembrane transport
EggNOG OGsKOG0768@1,KOG0768@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Ec32 ortholog descriptionMitochondrial carrier protein
Ec32 orthologEc-01_000960.1
Exons7
Model size991
Cds size804
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1844.5356.1prot_L-elsbetiae_contig1844.5356.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1844 9112..13571 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815768.8266428-CDS-L-elsbetiae_contig1844:9111..91471622815768.8266428-CDS-L-elsbetiae_contig1844:9111..9147Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1844 9112..9147 +
1691683090.0875187-CDS-L-elsbetiae_contig1844:9111..91471691683090.0875187-CDS-L-elsbetiae_contig1844:9111..9147Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1844 9112..9147 +
1622815768.8380117-CDS-L-elsbetiae_contig1844:9698..98551622815768.8380117-CDS-L-elsbetiae_contig1844:9698..9855Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1844 9699..9855 +
1691683090.1015866-CDS-L-elsbetiae_contig1844:9698..98551691683090.1015866-CDS-L-elsbetiae_contig1844:9698..9855Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1844 9699..9855 +
1622815768.8533123-CDS-L-elsbetiae_contig1844:10550..106451622815768.8533123-CDS-L-elsbetiae_contig1844:10550..10645Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1844 10551..10645 +
1691683090.1112442-CDS-L-elsbetiae_contig1844:10550..106451691683090.1112442-CDS-L-elsbetiae_contig1844:10550..10645Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1844 10551..10645 +
1622815768.8630824-CDS-L-elsbetiae_contig1844:10908..111061622815768.8630824-CDS-L-elsbetiae_contig1844:10908..11106Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1844 10909..11106 +
1691683090.1228788-CDS-L-elsbetiae_contig1844:10908..111061691683090.1228788-CDS-L-elsbetiae_contig1844:10908..11106Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1844 10909..11106 +
1622815768.8724327-CDS-L-elsbetiae_contig1844:11723..118581622815768.8724327-CDS-L-elsbetiae_contig1844:11723..11858Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1844 11724..11858 +
1691683090.1311142-CDS-L-elsbetiae_contig1844:11723..118581691683090.1311142-CDS-L-elsbetiae_contig1844:11723..11858Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1844 11724..11858 +
1622815768.8821044-CDS-L-elsbetiae_contig1844:12653..127521622815768.8821044-CDS-L-elsbetiae_contig1844:12653..12752Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1844 12654..12752 +
1691683090.1437163-CDS-L-elsbetiae_contig1844:12653..127521691683090.1437163-CDS-L-elsbetiae_contig1844:12653..12752Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1844 12654..12752 +
1622815768.8918123-CDS-L-elsbetiae_contig1844:13487..135711622815768.8918123-CDS-L-elsbetiae_contig1844:13487..13571Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1844 13488..13571 +
1691683090.1538005-CDS-L-elsbetiae_contig1844:13487..135711691683090.1538005-CDS-L-elsbetiae_contig1844:13487..13571Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1844 13488..13571 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815768.9014282-UTR-L-elsbetiae_contig1844:13571..137581622815768.9014282-UTR-L-elsbetiae_contig1844:13571..13758Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1844 13572..13758 +
1691683090.1625943-UTR-L-elsbetiae_contig1844:13571..137581691683090.1625943-UTR-L-elsbetiae_contig1844:13571..13758Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1844 13572..13758 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1844.5356.1

>prot_L-elsbetiae_contig1844.5356.1 ID=prot_L-elsbetiae_contig1844.5356.1|Name=mRNA_L-elsbetiae_contig1844.5356.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=268bp
MSEQPSFLASLVAGGMAGTAVDVALYPLDTIKTRLQSPDGFIKAGGLRGV
YNGLSAAAVGSAPGAALFFSSYEAAKHALDPKSPFSHMAAASVAETIACL
VRVPTENVKQKMQAGLHGTATETVNAILKSGGMRGFYTGYLTTVVREIPF
SFIQFPIYEWLKVTWATRRGGPLESYEAAGCGSVSGAFAAAVTTPMDVVK
TRLMLGADKHGAAYRGLGDTFRRVYTEEGAAALMSGVTPRVTWIGIGGFV
FFGVYEGSKRQLMGLGV*
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mRNA from alignment at L-elsbetiae_contig1844:9112..13758+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1844.5356.1 ID=mRNA_L-elsbetiae_contig1844.5356.1|Name=mRNA_L-elsbetiae_contig1844.5356.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4647bp|location=Sequence derived from alignment at L-elsbetiae_contig1844:9112..13758+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCTGAGCAGCCCTCATTCCTGGCAAGCCTCGTGGTGAGTGATATGCA CTGCTTGTGTGCGTGGATCAGAAATACCAGGTGCTCCCAGCACGCAAACA CGCAAACAACACGGAGGCAGGAGAGGAAGCGGCATAACCCGCAAAAATTC AAAAAAAACGGCCGCTGTTTGCCGCTTGCACGCTGCACGCAGCTGGTGGC ATTACCTGCGAGGTGTTTTTCGGTGTATTTCTTGCCAGTAGCCCAGGAGG TGTATGTTGAACGAAGAAGCCACTCCTAGACGCACACGCTTGTTGCGTCC CCCAACTTCCAACACGGCCGCACAGCAGCAGCGGTAGCCGACTATTTATC TAACCTACAGGTCGTTCCCGTGCAGGAGAGCATCCCACCACTCTCCACCT CTTTCAGGATGTATCTAGAAATGTGTGCAACGATGTGGTGGCCCAAGAGT AGAATCAAGCGCTGTTCTTCTGGCGCCCGTGGCATTCCGAACCATAGACC CAGAGCTGGCCGAGTCCATCTCTTGCGACCAAAAAAATACCCGCAGCAAG CGAACAAACACACCCGCCCGCTTCACCACCACCGCAGGCCGGTGGCATGG CAGGGACGGCGGTGGACGTGGCCCTGTACCCGCTGGACACGATCAAGACC AGGCTGCAATCCCCCGACGGTTTCATCAAGGCCGGTGGTCTGCGGGGAGT TTACAACGGGCTCAGCGCCGCCGCGGTCGGCTCTGCGCCGGGAGGTGTGT GTGTTTGGTGTGAGAACGGGGGCTGATGATCTCACTCCGGATGTCTCCGC TGTGGAACGAACCCCAAGGGGGTGGGGCTATACATTCATGTTGCATCGAT CACGCAAGCAAGCCGTAGTCGCTGCAGACGATCGACCTCGCCATCTCTAC GAGGCCTTTAGCCTAGGGACGGGGCACGCCTGTCACGGTTTCGCCATATT TTATGCATCTAGATATATATACCACGGGGGAGGCGTTTTCGCCATACATA TTTACGACGGGGGGGGGGGGGTTCTTTTATTTGAGTCGTCTTGTGCTCCC TGCTGCCGAAAGTCTGCTGCCAGGGCTGAGGAGCTTATGGGCTACGCTTG CCTTTAGCACCGCCCAATCAAGCCGAACCGAACAAGCACCTAAAGTGTCT ATTCGTGTTACTTTCTTGCCGTAATCATGCGGGTTATCGCACCCCCGTGT TACAATAGCGTTTTTCTATAAAGCGTGTTTCTCCACAACCAGGAGGGTGC AAACACTAACTGATGCCTCTCTGGAAAACCCCCGACGAGGCGTTCCGAAA ACCACCCTTTTCGGCAGTGGTACCCTCCTGGTTGTGGAGAAATACGCTAC AGAAAAAACGCTTTAACACGGGAGTGCGATAACCCGCATGATAACGGTAG TCTTAGTCTTACTTTCGCCCCCCAACCTCCTCTGCCCAGCGGCGCTGTTT TTCAGTTCTTACGAGGCCGCCAAGCACGCGCTCGACCCGAAATCTCCCTT CTCTCACATGGCGGCAGCTTCGGTGGCCGAAACGGTGAGTCGGGCTGCTA CTCCTCGTTCTGCGAGAGCTGCGGTGTCTTAACACTTTTTGCCTTTTCGA CCGCACCCTCACACGTAAACTTGGGGGGGCACAAAGAGCCTGAGCGGGCT ATTTTTGGTACCGTCTCAGCTGCATTGTAGGTATACATACATAAATCATA AATATTCACTTGGCCCCCCTTCAGCATAGCCTAAGCCTCCCTCGCCCCTT GGCCGGGCCCTTAAACCTCAGCCTTTGAACGATCGGCCTGCGACCAGATT GCGTGCCTGGTGCGAGTCCCGACGGAGAACGTCAAGCAGAAGATGCAGGC GGGGCTACACGGCACGGCGACCGAGACGGTGAACGCCATCCTCAAGAGCG GGGGCATGCGGGGGTTCTACACCGGGTACCTAACCACGGTGGTGCGCGAG ATCCCCTTCTCCTTCATCCAGTTCCCGATCTACGAGTGGCTCAAGGTGTG TACATAGAAACGCCAGGACAACAGGCGCGGCGGTCGGTAGATACTGTTTG TCCCGCCTTGTCTGGTCGTTTGTGTTGACACATACAGGCTGAGGCTTCCT GCCAATAGAACCCTCAATTCTCAAAAAGAGCTGTGGGCGCAGCGGGGGGG GGGGGGGTATTTATCTAGGAAATAGAGTGAAAAATCTCCCACAGCCACTT TTGCAGAATTGGGGGGCCTGCTGCGGGAACAGGAAGACTATAGAGAAGCT GCTGTAATTCGCTCGGTCGCTTGAGCGCTGTGTGGGCGAGGGAGCGGAGA GGGGGCTAAGATTCGCGTCGCAACGCGTGGGTTCCCTGATTATTATTACG GTACATACCCGCATTTCGGCGGTGTTAGATCGGTAGAGTCGGCATATATT TCTCGAAGGTATTTCATCATATGTAGATCTAGATAAATAAAAGGTGGCGA GCTATGTATGTACGACCTTGTATGTATATTGATGTCAAGTGTCCCCCAAA ATGTCTCATTTGATCTGTGTTTTTTTCACAGCAAGCGGCTTGAGGTGTGC CACGTTCGTTCGATTGTGAGAATGTTAATGCTTGACGCTCTTTTGCTGTC CCCTTGTTTCAGGTGACCTGGGCAACCCGGAGAGGGGGCCCGCTGGAGTC GTACGAAGCGGCTGGGTGTGGGTCGGTGTCCGGGGCGTTTGCGGCGGCGG TCACCACGCCGATGGATGTTGTCAAGACCAGGCTTATGCTGGGGGCGGTG AGCCAGCGGTAGCATCGCTGTCAATGCGTAGCATTTGAGCTGGGGGATGA GAGACAAGTTGCACCCATCGGTTAGAGCATTTTTTTTTTTTGGTCTTCAC ATTTATTTCCAGTGCTCGATGGGCTCCTTGTCACGAGGGCATCTTGCCGG GCTTGTATGTATGCGTGTATGTTGTCTTCACATTAAAAACCGCTCCGATC TCTACATCCAGTACCTCTCAATGCCCGTACCAATCCAACACTTGAGGCGG TCAATTCCCGTGGTCACAGGCTAACTTATGCTTCGAAGTACCCAAGAAAA GGTACACGAAAAAGAAAAGGGACCCGAAGGGCCAGCAAAGCAGCAATAAA GCCTGCGACTAAATTCTCCGGAGCTTTAACCTACGATGACTACAAAATGC CGCACACAAGTTCGTGCGAAGAACCGAATGGTTTGTAAAAGCAGGCGTTT CATTCAATACGTCCAAACCAGGTATGCGGTCTGACCCATGACGTCAGACG ATCGGGGGCCCCGACACTGTAAGCGATCTCCAAAATGTTCCTCTTTTTTA TTTTTTCTCGGCGTGGGCGCTGCGTGTGCAAAACCATCGCGCAGCACCAC CACCACACCACGCTACACAAGGCCTTTCTTCGTTCGCATGTATCGTATGT AGCCACCAAACACACGTGCTTGGTCTGCACCCACCAAACATCGGCGGTAC ATGACCACCGCCGTCGCACGGAGCCCCTCCTGGACCAACTAACCGGCAGT GGCGTTGCGCGCGCGGTTTCGTTGTTCTCCCGCTCGCACCAGGACAAGCA CGGAGCAGCGTACCGAGGCTTGGGGGACACGTTCCGGCGGGTGTACACCG AGGAGGGAGCGGCAGCGCTCATGTCGGGGGTCACGCCGCGGGTAAGGACA AGACAGAGCCATGCACATGTATGCATGCACATATGTATGTCGCTTATCCA CACAGATAGTTTGTGTTTCGTCCTCTCTGCCCGCGTTTCCTCCACCACAA GACGGGCAAAGAGCCGGCGAAGTCGGAGAGTGAGTGCCCCCTCCTTCCGC AGAGACAAAGGTTTCCTGTTGGGTTTGGCATCAGACACGCCAACAGCTAA AAATGGAGGGGGGGGGGGGGGGGGGGGGGGGCTCTTTTTTTTTTTTCCAA TTTTTTTTCACCTCCCCCCTCAAAGGCGGTGGAGCCACCCGAGCCCCCCC NNNNNNNNNNTATAGGGGGGTTCCGTGGTGTGGCTCTGTCTCGGCTGCGC AGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCTGCGCTCTCTTTAT TTGATCCAATTGTTTTTCACCTGCCACGCAAATGCAGTTGGAGCAACAGC GACCCACCTCTTTCCCACACCGCGCGCGACATAGATCACGCACCGCACTT AGTTAAGTTGTTGTGGTTGTTGCTGTTGCTTTCTAGCGTTGCCGTCGTTT GAAATATATACATATTTTTCCGTTGCTATTTAGTTTTGCTTTTTGTCAAA TTCGTGCCTTCTTTTTTTGTATTCATCGGTTTTGGTTGTTGTCGATGTGT TCATGGATCGTCTTTGTCCGGGGTCCGTGTCGCGTTTGCCCTTTTCCCCG CTCTACCTACCCTTGGGCCGCCACAGGTTACCTGGATAGGCATCGGTGGG TTCGTGTTCTTCGGAGTTTACGAGGGCTCCAAGAGGCAGCTCATGGGGCT GGGAGTTTGAATGAGAAGCCGTCGCTTGGGTGAGGGGATGGGCAGGTGTC ATATGAACTGGCTTTGTGTAGGGCTTCGCACGAGAAGCAACTGCTTTGAT GGGGGGATGAACGCAAATGTCAAAAGCCGATACGTCGGTGACGAGTCGGC CGTTTTCTCGGACGCGTGTATTTCTCGAGTTTTGGGGCAGTCACCCC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1844:9112..13758+

>mRNA_L-elsbetiae_contig1844.5356.1 ID=mRNA_L-elsbetiae_contig1844.5356.1|Name=mRNA_L-elsbetiae_contig1844.5356.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1608bp|location=Sequence derived from alignment at L-elsbetiae_contig1844:9112..13758+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCTGAGCAGCCCTCATTCCTGGCAAGCCTCGTGATGTCTGAGCAGCC
CTCATTCCTGGCAAGCCTCGTGGCCGGTGGCATGGCAGGGACGGCGGTGG
ACGTGGCCCTGTACCCGCTGGACACGATCAAGACCAGGCTGCAATCCCCC
GACGGTTTCATCAAGGCCGGTGGTCTGCGGGGAGTTTACAACGGGCTCAG
CGCCGCCGCGGTCGGCTCTGCGCCGGGAGGCCGGTGGCATGGCAGGGACG
GCGGTGGACGTGGCCCTGTACCCGCTGGACACGATCAAGACCAGGCTGCA
ATCCCCCGACGGTTTCATCAAGGCCGGTGGTCTGCGGGGAGTTTACAACG
GGCTCAGCGCCGCCGCGGTCGGCTCTGCGCCGGGAGCGGCGCTGTTTTTC
AGTTCTTACGAGGCCGCCAAGCACGCGCTCGACCCGAAATCTCCCTTCTC
TCACATGGCGGCAGCTTCGGTGGCCGAAACGCGGCGCTGTTTTTCAGTTC
TTACGAGGCCGCCAAGCACGCGCTCGACCCGAAATCTCCCTTCTCTCACA
TGGCGGCAGCTTCGGTGGCCGAAACGATTGCGTGCCTGGTGCGAGTCCCG
ACGGAGAACGTCAAGCAGAAGATGCAGGCGGGGCTACACGGCACGGCGAC
CGAGACGGTGAACGCCATCCTCAAGAGCGGGGGCATGCGGGGGTTCTACA
CCGGGTACCTAACCACGGTGGTGCGCGAGATCCCCTTCTCCTTCATCCAG
TTCCCGATCTACGAGTGGCTCAAGATTGCGTGCCTGGTGCGAGTCCCGAC
GGAGAACGTCAAGCAGAAGATGCAGGCGGGGCTACACGGCACGGCGACCG
AGACGGTGAACGCCATCCTCAAGAGCGGGGGCATGCGGGGGTTCTACACC
GGGTACCTAACCACGGTGGTGCGCGAGATCCCCTTCTCCTTCATCCAGTT
CCCGATCTACGAGTGGCTCAAGGTGACCTGGGCAACCCGGAGAGGGGGCC
CGCTGGAGTCGTACGAAGCGGCTGGGTGTGGGTCGGTGTCCGGGGCGTTT
GCGGCGGCGGTCACCACGCCGATGGATGTTGTCAAGACCAGGCTTATGCT
GGGGGCGGTGACCTGGGCAACCCGGAGAGGGGGCCCGCTGGAGTCGTACG
AAGCGGCTGGGTGTGGGTCGGTGTCCGGGGCGTTTGCGGCGGCGGTCACC
ACGCCGATGGATGTTGTCAAGACCAGGCTTATGCTGGGGGCGGACAAGCA
CGGAGCAGCGTACCGAGGCTTGGGGGACACGTTCCGGCGGGTGTACACCG
AGGAGGGAGCGGCAGCGCTCATGTCGGGGGTCACGCCGCGGGACAAGCAC
GGAGCAGCGTACCGAGGCTTGGGGGACACGTTCCGGCGGGTGTACACCGA
GGAGGGAGCGGCAGCGCTCATGTCGGGGGTCACGCCGCGGGTTACCTGGA
TAGGCATCGGTGGGTTCGTGTTCTTCGGAGTTTACGAGGGCTCCAAGAGG
CAGCTCATGGGGCTGGGAGTTTGAGTTACCTGGATAGGCATCGGTGGGTT
CGTGTTCTTCGGAGTTTACGAGGGCTCCAAGAGGCAGCTCATGGGGCTGG
GAGTTTGA
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