mRNA_L-elsbetiae_contig1843.5351.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1843.5351.1 vs. uniprot
Match: D7FKH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKH2_ECTSI) HSP 1 Score: 647 bits (1670), Expect = 2.660e-230 Identity = 327/394 (82.99%), Postives = 352/394 (89.34%), Query Frame = 3 Query: 72 RTLGQEGCRCLSFYPAELV--DVPPKSGAVRGKVLEHAVDLRRSRPGDVISIPYEVTVGHGLRDFWQAAFSTHDRINTSTPFARSLGLQDQVLPFHLMLFLASSMSHVEAAMTQVAYRNAKYLWPGFAGDTFTKTFEIKRIRNTSDKERSTYDFTCRIVNQRGKVCMVCDRATMFPFFAPPSP--SGAPPPEQPV-EMADRLREHVVKQSEKLVELGGQTLRRFSGGQLIIHTPARPISETQSMELSSLARLTHSRHFDTVKHGADGLTVPAGLILALATSLSARDLHEVLHEELMYANFVNPFRPGDAMTSVTYIHRVEQHPNGVLEKLRIRTIGVKNVLTEELAGKPLPLALFLDEGLRTKGVELICRESCPELSGKIVVVAEREVIRQVNR 1238 R+LGQ R LSFY AE V D KSG V G+VLEHAV+++R RPGD I IPYEVTVG+GLRDFWQAAFSTHDRINTSTPFARSLGLQDQVLPF LMLFL+SSMSHVEAAMTQVAYRNA+YLWPGFAGDTFTK FEIK IRNTSDKERSTYDFTCR+VNQRGKVCM CDR TMFPFFAPPSP S A P EQP + ADRLR+HVVKQSEKL ELGGQTLRRFS GQLIIHTPARPIS TQSMELSSLARLTHSRHFDTVKHG DGL +PAGLI+ALATSLSARDLHEVLHEELMYANF+NPFRPGDAMTS+TY+ RVEQHPNGVLEKLR+RTIG+K++LT++L G PLPL LF+DEGLRTKGVE ICRESCPEL GKIVV+AEREVIRQ + Sbjct: 6 RSLGQR--RRLSFYTAEYVEGDTTHKSGRVLGRVLEHAVNVKRLRPGDTIRIPYEVTVGYGLRDFWQAAFSTHDRINTSTPFARSLGLQDQVLPFSLMLFLSSSMSHVEAAMTQVAYRNARYLWPGFAGDTFTKAFEIKGIRNTSDKERSTYDFTCRLVNQRGKVCMECDRTTMFPFFAPPSPRDSTATPEEQPPPKPADRLRDHVVKQSEKLAELGGQTLRRFSAGQLIIHTPARPISRTQSMELSSLARLTHSRHFDTVKHGEDGLAIPAGLIVALATSLSARDLHEVLHEELMYANFINPFRPGDAMTSITYVQRVEQHPNGVLEKLRVRTIGIKDILTDDLTGMPLPLELFVDEGLRTKGVEQICRESCPELCGKIVVLAEREVIRQAPK 397
BLAST of mRNA_L-elsbetiae_contig1843.5351.1 vs. uniprot
Match: A0A6H5KU73_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU73_9PHAE) HSP 1 Score: 520 bits (1339), Expect = 7.110e-181 Identity = 258/303 (85.15%), Postives = 278/303 (91.75%), Query Frame = 3 Query: 339 VLPFHLMLFLASSMSHVEAAMTQVAYRNAKYLWPGFAGDTFTKTFEIKRIRNTSDKERSTYDFTCRIVNQRGKVCMVCDRATMFPFFAPPSP--SGAPPPEQPV-EMADRLREHVVKQSEKLVELGGQTLRRFSGGQLIIHTPARPISETQSMELSSLARLTHSRHFDTVKHGADGLTVPAGLILALATSLSARDLHEVLHEELMYANFVNPFRPGDAMTSVTYIHRVEQHPNGVLEKLRIRTIGVKNVLTEELAGKPLPLALFLDEGLRTKGVELICRESCPELSGKIVVVAEREVIRQVNR 1238 VLPF LMLFL+SSMSHVEAAMTQVAYRNA+YLWPGFAGDTFTKTFEIK IRNTSDKERSTYDFTCR+VNQRGKVCM CDR TMFPFFAPPSP S A P EQP E ADRLR+HVVKQSEKL ELGGQTLRRFS GQLIIHTPARPIS TQSMELSSLARLTHSRHFDTVKHG DGL +PAGLI+ALATSLSARDLHEVLHEEL+YANF+NPFRPGDAMTS+TY+ RVEQHPNGVLEKLR+RTIG+K++LT++L G PLPL LF+D+GLRTKGVE ICRESCPEL GKIVV+AEREVIRQ + Sbjct: 40 VLPFSLMLFLSSSMSHVEAAMTQVAYRNARYLWPGFAGDTFTKTFEIKGIRNTSDKERSTYDFTCRLVNQRGKVCMECDRTTMFPFFAPPSPRDSTATPEEQPPPEPADRLRDHVVKQSEKLAELGGQTLRRFSAGQLIIHTPARPISRTQSMELSSLARLTHSRHFDTVKHGEDGLAIPAGLIVALATSLSARDLHEVLHEELIYANFINPFRPGDAMTSITYVQRVEQHPNGVLEKLRVRTIGIKDILTDDLTGMPLPLELFVDKGLRTKGVEQICRESCPELCGKIVVLAEREVIRQAPK 342
BLAST of mRNA_L-elsbetiae_contig1843.5351.1 vs. uniprot
Match: A0A7S2RYC8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RYC8_9STRA) HSP 1 Score: 355 bits (911), Expect = 4.710e-115 Identity = 179/388 (46.13%), Postives = 249/388 (64.18%), Query Frame = 3 Query: 96 RCLSFYPAELVDVPPKSGA----VRGKVLEHAVDLRRSRPGDVISIPYEVTVGHGLRDFWQAAFSTHDRINTSTPFARSLGLQDQVLPFHLMLFLASSMSHVEAAMTQVAYRNAKYLWPGFAGDTFTKTFEIKRIRNTSDKERSTYDFTCRIVNQRGKVCMVCDRATMFPFF--APPSPSGAPPPEQPVEMADRLREHVVKQSEKLVELGGQTLRRFSGGQLIIHTPARPISETQSMELSSLARLTHSRHFDTVKHGADGLTVPAGLILALATSLSARDLHEVLHEELMYANFVNPFRPGDAMTSVTYIHRVEQHPNGVLEKLRIRTIGVKNV-LTEELAGKPLPLALFLDEGLRTKGVELICRESCPELSGKIVVVAEREVIRQVNR 1238 RCLS + P + V G+ + HA+DL+R RPG+ I IPYEVTV +RDFW +AF ++DRINTSTPFAR+LG QD VLPF ++LFLA SM+H +AA QV Y NA Y WP F+GDTFT+TF IK R TSD E S + F C + NQRG+V D+ +FPF P + A P + L++H+++ + K+ LG Q+L GQLI+H+ RP+S TQ M+LSSLARLTH RHF+ + D + +P GL+L L S SARDLHEVLHE+++ +++N PGD + +++++ +E++ G +E L IRT+GVKN+ + EL G LP+ LF + R + E +C+E CP LS +IV ER ++RQ + Sbjct: 27 RCLSTKFFSVEGTAPHGSSNLDYVVGESVNHAIDLQRVRPGEPIEIPYEVTVNSSMRDFWLSAFHSNDRINTSTPFARNLGFQDAVLPFSMILFLAGSMTHADAAKVQVGYHNAIYHWPAFSGDTFTRTFHIKSRRTTSDGENSIFTFNCVLKNQRGRVVFTTDKTMLFPFKLNGPDELASATPAVAMGGAKEDLKKHIIESASKIGPLGSQSLTALRPGQLILHSLCRPLSATQCMQLSSLARLTHERHFNHHVYNIDEIYIPGGLVLGLTASASARDLHEVLHEDVLQCSYINNLHPGDTVGAISFVKAMEENITGDMEMLTIRTVGVKNIDVQRELQGMALPVRLFTESVKRPRDYEQLCKEECPILSNRIVACLERRILRQTPK 414
BLAST of mRNA_L-elsbetiae_contig1843.5351.1 vs. uniprot
Match: A0A7S2UZD2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZD2_9STRA) HSP 1 Score: 350 bits (898), Expect = 3.290e-113 Identity = 174/363 (47.93%), Postives = 249/363 (68.60%), Query Frame = 3 Query: 153 VRGKVLEHAVDLRRSRPGDVISIPYEVTVGHGLRDFWQAAFSTHDRINTSTPFARSLGLQDQVLPFHLMLFLASSMSHVEAAMTQVAYRNAKYLWPGFAGDTFTKTFEIKRIRNTSDKERSTYDFTCRIVNQRGKVCMVCDRATMFPFFAPPSPSGAPPPEQPVEMADRLREHVVKQSEKLVELGGQTLRRFSGGQLIIHTPARPISETQSMELSSLARLTHSRHFDTVKHGADGLTVPAGLILALATSLSARDLHEVLHEELMYANFVNPFRPGDAMTSVTYIHRVEQHPNGVLEKLRIRTIGVKNVLTEE-LAGKPLPLALFLDEGLRTKGVELICRESCPELSGKIVVVAEREVIRQVNR 1238 V G+VL+ L RPG+ + IPYE+TV H ++DFWQ+AF ++DR+NTSTPFAR+LG QDQVLP+ LML L SMSH++ A + VA+ ++Y WPGFAGDTF K + +R+TSD++ + + F C++ NQRG++ ++ MFPF PPS +P + + L++H V+++E L LG Q+LR+ GQLI+HT RP+++TQ+M+L+SL RLTH RHF+ D + VP G I+ L S ++RDLHE+LHEE+ A +NP RPGD M +++YI V+++ +G LE L I+T+G+KN+ L GK LP++LF D L K +E IC + CPELS KIVV AERE++RQ + Sbjct: 49 VEGEVLDQLARLEYIRPGEKLDIPYEITVSHSMQDFWQSAFYSYDRVNTSTPFARALGFQDQVLPYSLMLMLTGSMSHIDEAKSHVAWNKSRYHWPGFAGDTFRKNVRVLSLRHTSDQKNTLFTFLCKLENQRGQLVFSSEKTLMFPFLVPPSDVVFE--RRPQDRS--LQDHFVQRAETLEALGNQSLRKLRPGQLILHTMCRPLTQTQTMQLASLMRLTHERHFNRNIFKQDEILVPGGCIMGLMMSATSRDLHEILHEEVQSAALMNPLRPGDMMGAISYIKSVDENLSGDLEVLHIKTLGIKNMDPHRALIGKKLPVSLFQDT-LLPKEIEKICSDHCPELSHKIVVQAEREIMRQAPK 406
BLAST of mRNA_L-elsbetiae_contig1843.5351.1 vs. uniprot
Match: A0A7S2UCF5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UCF5_9STRA) HSP 1 Score: 349 bits (895), Expect = 2.070e-112 Identity = 183/366 (50.00%), Postives = 239/366 (65.30%), Query Frame = 3 Query: 150 AVRGKVLEHAVDLRRSRPGDVISIPYEVTVGHGLRDFWQAAFSTHDRINTSTPFARSLGLQDQVLPFHLMLFLASSMSHVEAAMTQVAYRNAKYLWPGFAGDTFTKTFEIKRIRNTSDKERSTYDFTCRIVNQRGKVCMVCDRATMFPF---FAPPSPSGAPPPEQPVEMADRLREHVVKQSEKLVELGGQTLRRFSGGQLIIHTPARPISETQSMELSSLARLTHSRHFDTVKHGADG-LTVPAGLILALATSLSARDLHEVLHEELMYANFVNPFRPGDAMTSVTYIHRVEQHPNGVLEKLRIRTIGVKNV-LTEELA-GKPLPLALFLDEGLRTKGVELICRESCPELSGKIVVVAEREVIRQ 1229 ++RG+VL+ AVDLR++RPGD + IPYE+TV + DFWQ+AF DRI+TS PF RS+GLQD+VLPF L+LFL SSM+H +AA QV + N Y WP FAGDTFTK F +K +R TSD S F C +VN RG+VCM D+ +F F + S EQ E R+H++ +S L ELG Q+L+ GQLI HT R I+ QSM+L+SLARLTH RHFD K+ D + P GL++ L TS S+RDLHE+LHEEL+ FVN P + + +++Y+ V+ G LE L +RTIGVKNV L +L G LPL LF + TK +E IC+E CP+LS KI+V +R +IRQ Sbjct: 63 SIRGEVLDLAVDLRKARPGDKLEIPYELTVSEAMHDFWQSAFHGQDRISTSRPFCRSIGLQDRVLPFPLVLFLTSSMTHADAAKVQVGFENVTYHWPCFAGDTFTKNFLVKSVRTTSDGNHSVIKFYCELVNHRGRVCMSADKQMLFEFPITGGSSNVSSVGRMEQDSENNQLFRDHLLSKSMTLAELGSQSLKALRPGQLIFHTMYRSITLAQSMQLASLARLTHERHFDLRKYSVDTEILCPGGLVVGLTTSASSRDLHEILHEELLNVTFVNALHPNNVVGAMSYVQSVDDTIPGDLEMLLVRTIGVKNVDLVRDLGDGAHLPLELFTRTKMTTKEIERICKEHCPKLSNKIIVQMDRRIIRQ 428
BLAST of mRNA_L-elsbetiae_contig1843.5351.1 vs. uniprot
Match: A0A7S4JXC3_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JXC3_9STRA) HSP 1 Score: 343 bits (881), Expect = 6.190e-111 Identity = 171/367 (46.59%), Postives = 246/367 (67.03%), Query Frame = 3 Query: 153 VRGKVLEHAVDLRRSRPGDVISIPYEVTVGHGLRDFWQAAFSTHDRINTSTPFARSLGLQDQVLPFHLMLFLASSMSHVEAAMTQVAYRNAKYLWPGFAGDTFTKTFEIKRIRNTSDKERSTYDFTCRIVNQRGKVCMVCDRATMFPFFAPPSPSGAPPPEQPVEMADR---LREHVVKQSEKLVELGGQTLRRFSGGQLIIHTPARPISETQSMELSSLARLTHSRHFDTVKHGADG-LTVPAGLILALATSLSARDLHEVLHEELMYANFVNPFRPGDAMTSVTYIHRVEQHPNGVLEKLRIRTIGVKNV-LTEELAGKPLPLALFLDEGLRTKGVELICRESCPELSGKIVVVAEREVIRQVNR 1238 VRG +L+ AV+LR SRPGD I IPYE+TV ++ FW + F +RINTS PFAR +GLQD+VLPF L LFL SSM+H +AA QV + NA Y WP FAGDTFTK+F+++ IRNTSD S + F C ++NQRG+VCM D+ +F F P S E P + A + R+H++ +S+ L +LG +L GQL++HT R I+ +QS +L+SLARLTH RHFDT ++ + +P GL+L L S ++RD+HE+LHEE++ A+FV+ PG+ + +++Y+ ++ G LE + +RTIGVKN+ ++ +L PLPL LF + T+ +E IC+E CP L+ KIV+ +R ++RQ +R Sbjct: 25 VRGDILDLAVNLRSSRPGDKIDIPYELTVSDSMQGFWHSVFHAQNRINTSRPFARKVGLQDRVLPFSLALFLTSSMTHADAAKVQVGFGNAVYHWPAFAGDTFTKSFKVRSIRNTSDGHHSIFHFECELINQRGRVCMSADKYLIFEFTVPESHV-----ELPADSATKGQMFRDHLISKSDSLHDLGSHSLTTLFPGQLVLHTMNRSITFSQSQQLASLARLTHPRHFDTRRYDIHTEIFIPGGLVLGLTMSAASRDMHEILHEEILNASFVHHLHPGNVVGAISYVQSLDDGLPGDLESIVVRTIGVKNMDVSRDLKDTPLPLELFTGDAKTTQQIEKICKERCPMLANKIVLQLDRRILRQASR 386
BLAST of mRNA_L-elsbetiae_contig1843.5351.1 vs. uniprot
Match: A0A4D9D1N7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1N7_9STRA) HSP 1 Score: 335 bits (859), Expect = 3.300e-106 Identity = 180/395 (45.57%), Postives = 237/395 (60.00%), Query Frame = 3 Query: 147 GAVRGKVLEHAVDLRRSRPGDVISIPYEVTVGHGLRDFWQAAFSTHDRINTSTPFARSLGLQDQVLPFHLMLFLASSMSHVEAAMTQVAYRNAKYLWPGFAGDTFTKTFEIKRIRNTSDKERSTYDFTCRIVNQRGKVCMVCDRATMFPFFAPPS----PSGAPPPEQPVEMADRLREHVVKQSEKLVELGGQTLRRFSGGQLIIHTPARPISETQ-----------------------------SMELSSLARLTHSRHFDTVKHGADGLTVPAGLILALATSLSARDLHEVLHEELMYANFVNPFRPGDAMTSVTYIHRVEQHPNGVLEKLRIRTIGVKNVLTE-ELAGKPLPLALFLDEGLRTKGVELICRESCPELSGKIVVVAEREVIRQ 1229 G V G+V +HA+DL RPG+ I +PYE+T+ RDFWQ+ F +HDR+NTSTPFAR LG QDQVLPF LMLFL SMSH ++A QV ++NA Y WP FAGDT TK F I+ +R S + S + F C + NQRG+V +++ +FP P S P PP L EH+V +++ L LG Q+L+ GQL++H+ ARP+S Q SM+LSSL RLTH RHF+T K D + +P GL+L L S SARDLHEVLHEE++ F+N P D ++S +YI ++++ G LE L +RTIGVKNV +L + PLALF LRTK +E +C+ PELS KIV V ER ++RQ Sbjct: 102 GWVVGEVTDHAIDLHDVRPGEAIDVPYELTINPSFRDFWQSVFYSHDRLNTSTPFARKLGFQDQVLPFSLMLFLTGSMSHADSATVQVGFQNAIYHWPAFAGDTITKRFVIRSVRVASSNKYSIFSFHCELKNQRGQVIFTAEKSMIFPVVLPASNVTFPVAVPP--------RLLEEHLVSRADSLHALGSQSLQSLRPGQLLLHSLARPLSPAQVRGGWEXXXXXXXXXXXXXXXKTGTGTGESMQLSSLGRLTHERHFNTRKFKRDEMYIPGGLVLGLTLSASARDLHEVLHEEVIECAFINHLHPWDIVSSFSYIKEMDENITGDLEALTLRTIGVKNVDVHLDLLDQAFPLALFTTPSLRTKHMEALCKAHIPELSKKIVCVVERRILRQ 488
BLAST of mRNA_L-elsbetiae_contig1843.5351.1 vs. uniprot
Match: A0A7S2F3A4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F3A4_9STRA) HSP 1 Score: 323 bits (829), Expect = 1.550e-102 Identity = 167/364 (45.88%), Postives = 232/364 (63.74%), Query Frame = 3 Query: 147 GAVRGKVLEHAVDLRRSRPGDVISIPYEVTVGHGLRDFWQAAFSTHDRINTSTPFARSLGLQDQVLPFHLMLFLASSMSHVEAAMTQVAYRNAKYLWPGFAGDTFTKTFEIKRIRNTSDKERSTYDFTCRIVNQRGKVCMVCDRATMFPFFAPPSPSGA--PPPEQPVEMADRLREHVVKQSEKLVELGGQTLRRFSGGQLIIHTPARPISETQSMELSSLARLTHSRHFDTVKHGADGLTVPAGLILALATSLSARDLHEVLHEELMYANFVNPFRPGDAMTSVTYIHRVEQHPNGVLEKLRIRTIGVKNV-LTEELAGKPLPLALFLDEGLRTKGVELICRESCPELSGKIVVVAEREVIRQ 1229 G + G+V++ +VDLR+ PGD + IPYE+TV +RDFWQ++F ++DRI+ S PFAR LG QD +LPF LMLFL SMSH +AA QV Y N Y +P + GDTFT+ +IK RNTS E S + F C + NQRG+V + D++ +FPF + S P E+P +D ++ V K E+ V++ GQ+L GQL++H+ ARP+S TQ M+LSS+A+LTH RHF+ + VP GL+L L S SARDLHEVLHEEL+ F+N PGD + +++ + VE++ G +E + +RTIGVKN+ + EL P+P LF + R + E IC CP L KIV ER ++RQ Sbjct: 63 GFLIGEVVDASVDLRQMLPGDSLDIPYELTVNSSIRDFWQSSFHSNDRIHNSKPFARRLGFQDTLLPFGLMLFLTGSMSHADAAKVQVGYTNGHYCFPAYPGDTFTRRLQIKSRRNTSSGENSLFTFQCELRNQRGQVVFITDKSMLFPFVLDDNSSVEYDPVAERPFSTSDMMKHLVDKFQEQEVDIRGQSLNTLRPGQLLLHSMARPLSTTQIMQLSSIAKLTHERHFNHHVFDIANIYVPGGLVLGLVQSASARDLHEVLHEELVDCKFINNLHPGDTVGALSMVKSVEENVTGEIESIVLRTIGVKNLDVGRELNQVPIPRELFSGKVDRPRAYEEICERGCPILHKKIVACVERRILRQ 426
BLAST of mRNA_L-elsbetiae_contig1843.5351.1 vs. uniprot
Match: A0A7R9U4Q5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4Q5_9STRA) HSP 1 Score: 320 bits (821), Expect = 1.060e-101 Identity = 162/364 (44.51%), Postives = 238/364 (65.38%), Query Frame = 3 Query: 153 VRGKVLEHAVDLRRSRPGDVISIPYEVTVGHGLRDFWQAAFSTHDRINTSTPFARSLGLQDQVLPFHLMLFLASSMSHVEAAMTQVAYRNAKYLWPGFAGDTFTKTFEIKRIRNTSDKERSTYDFTCRIVNQRGKVCMVCDRATMFPFFAPPSPSGAPPPEQPVEMADRLREHVVKQSEKLVELGGQTLRRFSGGQLIIHTPARPISETQSMELSSLARLTHSRHFDTVKHGADG-LTVPAGLILALATSLSARDLHEVLHEELMYANFVNPFRPGDAMTSVTYIHRVEQHPNGVLEKLRIRTIGVKNVLTEELAGKPLPLALFLDEGLRTKGVELICRES-CPELSGKIVVVAEREVIRQVNR 1238 V G ++++AV+ R+ RPGD I +PYEVT+ +R FWQ+AF H+RINTSTPFA +LG +DQ+LPF L+LFLA SMSH +AA Q+AY NA Y +P +AGDTF K F +K++R TSDKE+S F CR++NQ+ +V CD+ +FPF +G P QPV D L +S L ELG Q++ GQLI+H+ RP+++TQS +LS+LARLTH RHFD++++ +P GLI+ + S S+RD HEVLHE + +F+ PGD++ ++++I +++ G LE + +RTIGVKN +L G+ +P LF + L+ ++ I + +L +IVV A+R+++RQ R Sbjct: 47 VSGGLVDNAVEFRKLRPGDHIQVPYEVTIDDNVRVFWQSAFYAHERINTSTPFATALGFKDQLLPFPLLLFLAGSMSHADAAKMQIAYSNAYYCYPAYAGDTFRKEFVVKKVRTTSDKEQSIMTFGCRLLNQQDRVIFHCDKVMLFPFPRDDEAAGEYMPVQPV---DGLMGAFATRSSVLGELGNQSVTPLRPGQLILHSLQRPLTDTQSRQLSTLARLTHERHFDSLQYPQQSDRYIPGGLIVGMLMSASSRDFHEVLHEAIPNCSFIRKVHPGDSVGAISFITDLQEDVGGDLESITVRTIGVKNFAVRDLRGRQIPTKLFTEPRLQQSSIDAILEGTDLGDLGDRIVVAADRKILRQSPR 407
BLAST of mRNA_L-elsbetiae_contig1843.5351.1 vs. uniprot
Match: A0A812SDL1_SYMMI (Mch protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SDL1_SYMMI) HSP 1 Score: 317 bits (813), Expect = 1.050e-100 Identity = 168/365 (46.03%), Postives = 221/365 (60.55%), Query Frame = 3 Query: 108 FYPAELVDVPPKSGAVRGKVLEHAVDLRRSRPGDVISIPYEVTVGHGLRDFWQAAFSTHDRINTSTPFARSLGLQDQVLPFHLMLFLASSMSHVEAAMTQVAYRNAKYLWPGFAGDTFTKTFEIKRIRNTSDKERSTYDFTCRIVNQRGKVCMVCDRATMFPFFAPPSPSGAPPPEQPVEMADRLREHVVKQSEKLVELGGQTLRRFSGGQLIIHTPARPISETQSMELSSLARLTHSRHFDTVKHGADGLTVPAGLILALATSLSARDLHEVLHEELMYANFVNPFRPGDAMTSVTYIHRVEQHPNGVLEKLRIRTIGVKNV-LTEELAGKPLPLALFLDEGLRTKG-VELICRESCPELSGKI 1196 FY + V V G VL+H +DL + RPGDVI +PYE+T+ H RD W +AF HDRI TSTPFAR LGLQD ++PF MLFLA SMSH + A Q+ + Y WP FAGDTF K F I+R+R TSD S C I NQR C++ MFPF PPS P E+ ++ ++V S+KL LG TL GQLI HT RP+S T M+L++LARL H RHF+T K AD + VP GL+ +LATSL++RDLHEV+ EEL+ F N PG+ ++++T+I + +H +G LE++ IRT+ VKN + L G LP LF + +E I ++ CP+LS KI Sbjct: 34 FYTVNPIKV---DSDVSGVVLDHTIDLSKCRPGDVIEVPYELTINHSFRDMWHSAFYCHDRIQTSTPFARHLGLQDAIIPFSQMLFLAGSMSHADHAKIQLGFGVGVYHWPAFAGDTFRKKFVIRRLRTTSDGNHSIATIACEIRNQRDVNLFTCEKHMMFPFRVPPSDVVVPVTEE--AKSETFLNYLVSNSDKLSSLGSHTLSHLRPGQLIFHTLVRPLSPTLVMQLATLARLNHERHFNTRKFSADEILVPGGLVYSLATSLASRDLHEVIFEELVNCAFPNNLAPGETVSAMTFIRHLSEHVSGDLEEVDIRTVAVKNTEVHSALEGVQLPAELFATADIHMPAQLEDILKKKCPQLSKKI 393 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1843.5351.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1843.5351.1 >prot_L-elsbetiae_contig1843.5351.1 ID=prot_L-elsbetiae_contig1843.5351.1|Name=mRNA_L-elsbetiae_contig1843.5351.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=408bp MLRRLGLKTRTLGQEGCRCLSFYPAELVDVPPKSGAVRGKVLEHAVDLRRback to top mRNA from alignment at L-elsbetiae_contig1843:12955..18220- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1843.5351.1 ID=mRNA_L-elsbetiae_contig1843.5351.1|Name=mRNA_L-elsbetiae_contig1843.5351.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5266bp|location=Sequence derived from alignment at L-elsbetiae_contig1843:12955..18220- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1843:12955..18220- >mRNA_L-elsbetiae_contig1843.5351.1 ID=mRNA_L-elsbetiae_contig1843.5351.1|Name=mRNA_L-elsbetiae_contig1843.5351.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2448bp|location=Sequence derived from alignment at L-elsbetiae_contig1843:12955..18220- (Laminarionema elsbetiae ELsaHSoW15)back to top |