mRNA_L-elsbetiae_contig18255.5281.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig18255.5281.1
Unique NamemRNA_L-elsbetiae_contig18255.5281.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig18255.5281.1 vs. uniprot
Match: D8LRH6_ECTSI (Ornithine cyclodeaminase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRH6_ECTSI)

HSP 1 Score: 390 bits (1001), Expect = 5.350e-134
Identity = 203/239 (84.94%), Postives = 207/239 (86.61%), Query Frame = 1
Query:    1 EQGLPAGSGIFVVCDATNGAPLAIFQENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDPAKTQVWADEIEAELGYKVHVCKTAEECVRQSDVVFTQTPGSETVVELDWLRPHATIIASGSDQPTKNEIPAEVQKASKMVCDLVRQCEQVGELRSAIKAGTMTREDVYAEIGEVVNGSKPGRVGEELILVDLTGTGAQDAAIGQVAWDILSK 717
            E+GLPAGSGIFVVCDATNGAPLAIFQENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLD  KT+ WADEIEAELGYKV                          VELDWLRPHATIIASGSDQPTKNEIPAEVQKASKMVCDLVRQCEQVGELRSAIKAG MTR+DVYAEIG+VVNG KPGR GEELILVDLTGTGAQDAAIGQVAWDILSK
Sbjct:  135 EKGLPAGSGIFVVCDATNGAPLAIFQENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDVVKTKEWADEIEAELGYKV--------------------------VELDWLRPHATIIASGSDQPTKNEIPAEVQKASKMVCDLVRQCEQVGELRSAIKAGVMTRDDVYAEIGDVVNGDKPGRTGEELILVDLTGTGAQDAAIGQVAWDILSK 347          
BLAST of mRNA_L-elsbetiae_contig18255.5281.1 vs. uniprot
Match: A0A7S2RSZ5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RSZ5_9STRA)

HSP 1 Score: 362 bits (928), Expect = 3.520e-122
Identity = 176/239 (73.64%), Postives = 206/239 (86.19%), Query Frame = 1
Query:    1 EQGLPAGSGIFVVCDATNGAPLAIFQENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDPAKTQVWADEIEAELGYKVHVCKTAEECVRQSDVVFTQTPGSETVVELDWLRPHATIIASGSDQPTKNEIPAEVQKASKMVCDLVRQCEQVGELRSAIKAGTMTREDVYAEIGEVVNGSKPGRVGEELILVDLTGTGAQDAAIGQVAWDILSK 717
            E+GLP GSGIF+VCDATNGAPLAI QENR+LTDLRTGAAGA+SVKHFA+  HKKV F+G GVIA AMAR +  +H+FD+GFA+GLD      +AD I ++LGY V VC TAEE VR +DV+FTQT G+  V++LDWL+PHATIIASGSDQPTKNEIP EVQ+ SK+VCDLVRQC +VGELRSAI AG M+ +DVYAEIGEVVNG+KPGR G+ELILVDLTGTGAQDAAIGQVAW++LS+
Sbjct:  159 EKGLPPGSGIFIVCDATNGAPLAIMQENRYLTDLRTGAAGAISVKHFASPKHKKVAFIGTGVIAQAMARATNTLHQFDQGFAFGLDDGMNAQFADTIHSQLGYPVQVCATAEEAVRSADVIFTQTTGANHVLQLDWLQPHATIIASGSDQPTKNEIPPEVQRQSKLVCDLVRQCSRVGELRSAIAAGVMSEDDVYAEIGEVVNGTKPGREGDELILVDLTGTGAQDAAIGQVAWEVLSQ 397          
BLAST of mRNA_L-elsbetiae_contig18255.5281.1 vs. uniprot
Match: A0A7S0H4T2_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H4T2_9EUKA)

HSP 1 Score: 343 bits (881), Expect = 1.010e-115
Identity = 174/240 (72.50%), Postives = 201/240 (83.75%), Query Frame = 1
Query:    1 EQGLPAGSGIFVVCDATNGAPLAIFQENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDPAKTQVWADEIEAELGYKVHVCKTAEECVRQSDVVFTQTPGSETVVELDWLRPHATIIASGSDQPTKNEIPAEVQKASKMVCDLVRQCEQVGELRSAIKAGTMTREDVYAEIGEVVNGSKPGRVGEELILVDLTGTGAQDAAIGQVAWDILSKT 720
            ++GLP GSGIFVV DATNG PLAIFQENR+LTDLRTGAAGAVSVKHFAA+ H KV F+G G+IA AMAR S  VH + E   +GLD A+TQ + DE+EAEL +   VCK+AEE V  SDV+FTQTP ++TV+EL WL+PHATIIASGSDQ TKNEIP EV KASKMVCDLVRQC +VGELRSA++AG M   DVYAEIGEVVNG+KPGR G+ELI+VDLTGTGAQDAAIGQVAW++L  +
Sbjct:  111 DKGLPPGSGIFVVIDATNGFPLAIFQENRYLTDLRTGAAGAVSVKHFAAKDHTKVCFLGTGMIAGAMARASSEVHGWTEANCFGLDEAQTQRFCDEMEAELKFPFKVCKSAEEAVGSSDVIFTQTPAAQTVLELGWLKPHATIIASGSDQSTKNEIPVEVMKASKMVCDLVRQCSKVGELRSALEAGVMKETDVYAEIGEVVNGTKPGREGDELIVVDLTGTGAQDAAIGQVAWNVLGAS 350          
BLAST of mRNA_L-elsbetiae_contig18255.5281.1 vs. uniprot
Match: A0A6T5N8F9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5N8F9_HETAK)

HSP 1 Score: 334 bits (856), Expect = 6.730e-112
Identity = 167/240 (69.58%), Postives = 193/240 (80.42%), Query Frame = 1
Query:    1 EQGLPAGSGIFVVCDATNGAPLAIFQENRFLTDLRTGAAGAVSVKHFAAR-HHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDPAKTQVWADEIEAELGYKVHVCKTAEECVRQSDVVFTQTPGSETVVELDWLRPHATIIASGSDQPTKNEIPAEVQKASKMVCDLVRQCEQVGELRSAIKAGTMTREDVYAEIGEVVNGSKPGRVGEELILVDLTGTGAQDAAIGQVAWDILSK 717
            E+GL  GSGIF+VCDATNGAPL IFQENR+LTDLRTGAAGA+SVK+F A   HK + F+G G IA +MA+G+ CVH F++GF YGLD A  + +A EIEA  GY V VC TAEE VR  DVVFTQT GS  V+E DWLRPHATIIASGSDQPTK EIP +V   +KMVCDL  QC + GELRSA+K G MT  DV+AE+GEVVNG+K GR G+EL+LVDLTGTGAQDAAIGQVAW+ILS+
Sbjct:  113 EKGLSPGSGIFIVCDATNGAPLGIFQENRYLTDLRTGAAGALSVKYFGASPKHKNISFIGTGAIAESMAKGTACVHNFEQGFCYGLDRAMNERFAAEIEATCGYPVKVCDTAEEAVRSGDVVFTQTVGSSVVLEGDWLRPHATIIASGSDQPTKQEIPVDVMARAKMVCDLTAQCARFGELRSALKEGAMTEADVHAELGEVVNGTKAGREGDELVLVDLTGTGAQDAAIGQVAWEILSQ 352          
BLAST of mRNA_L-elsbetiae_contig18255.5281.1 vs. uniprot
Match: A0A7R9UBH1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBH1_9STRA)

HSP 1 Score: 321 bits (822), Expect = 1.220e-106
Identity = 160/239 (66.95%), Postives = 192/239 (80.33%), Query Frame = 1
Query:    1 EQGLPAGSGIFVVCDATNGAPLAIFQENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDPAKTQVWADEIEAELGYKVHVCKTAEECVRQSDVVFTQTPGSETVVELDWLRPHATIIASGSDQPTKNEIPAEVQKASKMVCDLVRQCEQVGELRSAIKAGTMTREDVYAEIGEVVNGSKPGRVGEELILVDLTGTGAQDAAIGQVAWDILSK 717
            ++GLP GSG+F+VCDATNGAPL IFQENR++TDLRTGAAGAV+VKH   R   KV FVG GVI  AMA     VH+F  G  +GLD A+++ +A +I  ELGY + VC T E+ +  +DVVFT TP +  V+EL  L+P ATIIASGSDQPTK EIP EVQKAS+MVCDLVRQC +VGELRSAI+AG MT +DV+AE+GE+VNG+KPGRVG+ELILVDLTGTGAQDAAIGQVAW++L  
Sbjct:  121 DKGLPPGSGVFIVCDATNGAPLGIFQENRYMTDLRTGAAGAVAVKHCVNRDADKVCFVGGGVINLAMATACASVHDFRSGTVFGLDMAQSEAFAKQITDELGYPMTVCDTVEDALADADVVFTATPAAAPVLELGMLKPSATIIASGSDQPTKQEIPVEVQKASRMVCDLVRQCSRVGELRSAIEAGVMTEDDVHAELGEIVNGTKPGRVGDELILVDLTGTGAQDAAIGQVAWEVLGS 359          
BLAST of mRNA_L-elsbetiae_contig18255.5281.1 vs. uniprot
Match: A0A7S2XZG6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZG6_9STRA)

HSP 1 Score: 305 bits (782), Expect = 3.710e-101
Identity = 145/208 (69.71%), Postives = 177/208 (85.10%), Query Frame = 1
Query:    1 EQGLPAGSGIFVVCDATNGAPLAIFQENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDPAKTQVWADEIEAELGYKVHVCKTAEECVRQSDVVFTQTPGSETVVELDWLRPHATIIASGSDQPTKNEIPAEVQKASKMVCDLVRQCEQVGELRSAIKAGTMTREDVYAEIGEVVNGSKPG 624
            E+GLP GSG+F+VC+A NGAPL IFQENR+LTDLRTGAAGA+SVK+F A+ H KV F+GAGVIA AMAR S CVH+F EGFAYGLD A+T+ +  E+ +ELG+   VC+TAEE VR +DV+FTQT G+  V++LDWL+PHATIIASGSDQPTKNEIP++V K SKM+CDLVRQC +VGELR+AIK G MT +DV+AEIG+VV G+KPG
Sbjct:  112 EKGLPPGSGVFIVCNAVNGAPLGIFQENRYLTDLRTGAAGAISVKNFVAKEHTKVAFIGAGVIAQAMARASSCVHKFTEGFAYGLDTAQTEGFVSEMSSELGFPFKVCETAEEAVRSADVIFTQTTGAAPVLQLDWLKPHATIIASGSDQPTKNEIPSDVMKKSKMICDLVRQCSKVGELRTAIKEGVMTEDDVFAEIGDVVLGNKPG 319          
BLAST of mRNA_L-elsbetiae_contig18255.5281.1 vs. uniprot
Match: C1MM99_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1MM99_MICPC)

HSP 1 Score: 295 bits (756), Expect = 7.320e-97
Identity = 143/237 (60.34%), Postives = 181/237 (76.37%), Query Frame = 1
Query:    1 EQGLPAGSGIFVVCDATNGAPLAIFQENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDPAKTQVWADEIEAELGYKVHVCKTAEECVRQSDVVFTQTPGSETVVELDWLRPHATIIASGSDQPTKNEIPAEVQKASKMVCDLVRQCEQVGELRSAIKAGTMTREDVYAEIGEVVNGSKPGRVGEELILVDLTGTGAQDAAIGQVAWDIL 711
            E+GLPAGSG+FVVCDATNG P A+  ENR+LTD+RTGAAGAV VKH A +  K V F+G GVIA +MAR +  V+ F++G+ Y  +  K   + D+++ ELGY    C +AEE VR +DVVFTQTPG E V++L WL+PHATIIASGSDQPTKNEIP EV K +K++ D+  QC +VGE+RSA+ AG M   DV+AE+GE++NGSK GR G+ELI+ DLTGTGAQDAAIG    ++L
Sbjct:  107 EKGLPAGSGVFVVCDATNGGPKAVLHENRYLTDMRTGAAGAVCVKHLAVKGAKSVAFIGTGVIAESMARSTATVYGFEQGYGYSRNIDKATAFCDKMQKELGYDFKACDSAEEAVRNADVVFTQTPGGEWVLDLAWLKPHATIIASGSDQPTKNEIPPEVMKKAKVITDITAQCVRVGEVRSAVAAGVMKESDVHAELGEIINGSKKGRQGKELIVCDLTGTGAQDAAIGSYVMNVL 343          
BLAST of mRNA_L-elsbetiae_contig18255.5281.1 vs. uniprot
Match: C1E6G7_MICCC (Uncharacterized protein n=2 Tax=Micromonas TaxID=38832 RepID=C1E6G7_MICCC)

HSP 1 Score: 297 bits (760), Expect = 2.820e-95
Identity = 145/237 (61.18%), Postives = 179/237 (75.53%), Query Frame = 1
Query:    1 EQGLPAGSGIFVVCDATNGAPLAIFQENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDPAKTQVWADEIEAELGYKVHVCKTAEECVRQSDVVFTQTPGSETVVELDWLRPHATIIASGSDQPTKNEIPAEVQKASKMVCDLVRQCEQVGELRSAIKAGTMTREDVYAEIGEVVNGSKPGRVGEELILVDLTGTGAQDAAIGQVAWDIL 711
            ++GLPAGSG+FVVCDATNG P A+  ENR+LTDLRTGAAGAV+VKH A +  K V F+G GVIA AMAR S  VH F++G+ Y  D  K   + D++ AELGY    C +AEE VR +DVVFTQTPG E V++L WL+PHA I+ASGSDQPTKNEIP  V K +++V D+  QC +VGELRSA+ AG M   DV+A++GEV+NG+K GR G+ELI+ DLTGTGAQDAAIG     +L
Sbjct:  275 KKGLPAGSGVFVVCDATNGGPKAVLHENRYLTDLRTGAAGAVAVKHLAIKDAKSVAFIGTGVIAEAMARSSATVHGFEQGYGYSRDMTKNSAFCDKMSAELGYAFTPCSSAEEAVRNADVVFTQTPGGEWVLDLKWLKPHALIVASGSDQPTKNEIPPAVMKKARVVTDITAQCLRVGELRSAVAAGVMKETDVHAQLGEVINGTKKGRTGKELIVCDLTGTGAQDAAIGSYVMKVL 511          
BLAST of mRNA_L-elsbetiae_contig18255.5281.1 vs. uniprot
Match: A0A7S0GND7_MICPS (Hypothetical protein (Fragment) n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0GND7_MICPS)

HSP 1 Score: 289 bits (739), Expect = 9.070e-94
Identity = 142/238 (59.66%), Postives = 179/238 (75.21%), Query Frame = 1
Query:    1 EQGLPAGSGIFVVCDATNGAPLAIFQENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDPAKTQVWADEIEAELGYKVHVCKTAEECVRQSDVVFTQTPGSETVVELDWLRPHATIIASGSDQPTKNEIPAEVQKASKMVCDLVRQCEQVGELRSAIKAGTMTREDVYAEIGEVVNGSKPGRVGEELILVDLTGTGAQDAAIGQVAWDILS 714
            E+GLPAGSG+FVVCDA NG P AI  ENR+LTDLRTGAAGAV+VKH AA+  K V F+G GVIA AMAR +  V +F+E FAY   P K+  +  ++  ELG+  + C TAE+ VR +DVVFTQTPG E V+E +WLRPHA ++ SGSDQPTKNEIP  +   +K+V D+  QC +VGE+RSAI+AG MT EDV+AE+G++V+G   GR G+ELI+ DLTGTGAQDAAIG    + L+
Sbjct:  120 EKGLPAGSGVFVVCDAANGGPKAILHENRYLTDLRTGAAGAVAVKHLAAKRAKSVAFIGTGVIAEAMARATATVFDFEEAFAYSPSPKKSSTFCKKMSEELGFPHYACATAEDAVRAADVVFTQTPGGEWVLEEEWLRPHALVVCSGSDQPTKNEIPPAILAGAKVVTDITAQCARVGEVRSAIEAGVMTAEDVHAELGQIVSGKVKGRKGKELIVCDLTGTGAQDAAIGSHVMEALA 357          
BLAST of mRNA_L-elsbetiae_contig18255.5281.1 vs. uniprot
Match: C1MMA0_MICPC (Predicted protein (Fragment) n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MMA0_MICPC)

HSP 1 Score: 287 bits (735), Expect = 1.110e-93
Identity = 144/230 (62.61%), Postives = 175/230 (76.09%), Query Frame = 1
Query:    1 EQGLPAGSGIFVVCDATNGAPLAIFQENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDPAKTQVWADEIEAELGYKVHVCKTAEECVRQSDVVFTQTPGSETVVELDWLRPHATIIASGSDQPTKNEIPAEVQKASKMVCDLVRQCEQVGELRSAIKAGTMTREDVYAEIGEVVNGSKPGRVGEELILVDLTGTGAQDAAIG 690
            E+GLPAGSG+FVVCDATNG P A+  ENR+LTD+RTGAAGAV VKH A    K V F+G GVIA AMA+ +  VH F+E FAY   P K+  +  ++  ELGY  + C TAE+ VR +DVVFTQTPG E V+E  WLRPHATIIASGSDQPTKNEIP E+   +K+V D+  QC +VGELRSAI+AG MT  +V+AEIG++++G + GRVG E I+ DLTGTGAQDAAIG
Sbjct:  111 EKGLPAGSGVFVVCDATNGGPKAVLHENRYLTDMRTGAAGAVCVKHLAP-DAKSVAFIGTGVIAEAMAKATATVHGFEEAFAYARSPQKSSSFCKKMTKELGYPFYACATAEDAVRNADVVFTQTPGGEWVLEEQWLRPHATIIASGSDQPTKNEIPPEILMNAKVVTDITAQCSRVGELRSAIEAGLMTEANVHAEIGQIISGEREGRVGNERIVCDLTGTGAQDAAIG 339          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18255.5281.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRH6_ECTSI5.350e-13484.94Ornithine cyclodeaminase n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S2RSZ5_9STRA3.520e-12273.64Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S0H4T2_9EUKA1.010e-11572.50Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A6T5N8F9_HETAK6.730e-11269.58Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7R9UBH1_9STRA1.220e-10666.95Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2XZG6_9STRA3.710e-10169.71Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
C1MM99_MICPC7.320e-9760.34Predicted protein n=2 Tax=Micromonas pusilla TaxID... [more]
C1E6G7_MICCC2.820e-9561.18Uncharacterized protein n=2 Tax=Micromonas TaxID=3... [more]
A0A7S0GND7_MICPS9.070e-9459.66Hypothetical protein (Fragment) n=2 Tax=Micromonas... [more]
C1MMA0_MICPC1.110e-9362.61Predicted protein (Fragment) n=1 Tax=Micromonas pu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig18255contigL-elsbetiae_contig18255:886..2990 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score351.7
Seed ortholog evalue2.8e-94
Seed eggNOG ortholog227086.JGI_V11_49337
KEGG rclassRC00354
KEGG koko:K01750
KEGG ReactionR00671
KEGG Pathwayko00330,ko01110,ko01130,ko01230,map00330,map01110,map01130,map01230
Hectar predicted targeting categoryother localisation
EggNOG free text desc.thiomorpholine-carboxylate dehydrogenase activity
EggNOG OGsCOG2423@1,KOG3007@2759
EC4.3.1.12
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Ec32 ortholog descriptionOrnithine cyclodeaminase
Ec32 orthologEc-18_004550.1
Exons3
Model size723
Cds size723
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig18255.5281.1prot_L-elsbetiae_contig18255.5281.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig18255 886..2990 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815761.3848946-CDS-L-elsbetiae_contig18255:885..12751622815761.3848946-CDS-L-elsbetiae_contig18255:885..1275Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18255 886..1275 +
1691683085.451241-CDS-L-elsbetiae_contig18255:885..12751691683085.451241-CDS-L-elsbetiae_contig18255:885..1275Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18255 886..1275 +
1622815761.398368-CDS-L-elsbetiae_contig18255:2082..21691622815761.398368-CDS-L-elsbetiae_contig18255:2082..2169Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18255 2083..2169 +
1691683085.462141-CDS-L-elsbetiae_contig18255:2082..21691691683085.462141-CDS-L-elsbetiae_contig18255:2082..2169Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18255 2083..2169 +
1622815761.4142194-CDS-L-elsbetiae_contig18255:2744..29901622815761.4142194-CDS-L-elsbetiae_contig18255:2744..2990Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18255 2745..2990 +
1691683085.4720469-CDS-L-elsbetiae_contig18255:2744..29901691683085.4720469-CDS-L-elsbetiae_contig18255:2744..2990Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18255 2745..2990 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig18255.5281.1

>prot_L-elsbetiae_contig18255.5281.1 ID=prot_L-elsbetiae_contig18255.5281.1|Name=mRNA_L-elsbetiae_contig18255.5281.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=241bp
EQGLPAGSGIFVVCDATNGAPLAIFQENRFLTDLRTGAAGAVSVKHFAAR
HHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDPAKTQVWADEIEAE
LGYKVHVCKTAEECVRQSDVVFTQTPGSETVVELDWLRPHATIIASGSDQ
PTKNEIPAEVQKASKMVCDLVRQCEQVGELRSAIKAGTMTREDVYAEIGE
VVNGSKPGRVGEELILVDLTGTGAQDAAIGQVAWDILSKT*
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mRNA from alignment at L-elsbetiae_contig18255:886..2990+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig18255.5281.1 ID=mRNA_L-elsbetiae_contig18255.5281.1|Name=mRNA_L-elsbetiae_contig18255.5281.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2105bp|location=Sequence derived from alignment at L-elsbetiae_contig18255:886..2990+ (Laminarionema elsbetiae ELsaHSoW15)
GAACAGGGCCTTCCCGCCGGATCCGGCATCTTCGTCGTCTGCGACGCCAC CAACGGCGCCCCGCTGGCCATCTTCCAGGAGAACCGCTTCCTCACCGACC TGCGGACGGGGGCCGCCGGCGCGGTCTCTGTCAAGCACTTCGCGGCCCGG CACCACAAGAAGGTCGGCTTTGTGGGCGCCGGGGTCATCGCCGCCGCCAT GGCGCGGGGCTCCAAGTGCGTCCACGAGTTCGACGAGGGCTTCGCGTACG GGCTGGACCCGGCGAAGACGCAGGTGTGGGCGGACGAGATCGAGGCCGAG CTGGGCTACAAGGTGCACGTCTGCAAGACTGCCGAGGAGTGCGTGCGCCA GTCGGACGTGGTCTTCACCCAGACGCCCGGGTCCGAGACGGTGTGTGTGT CTTTTTTGTTCTGTCTCTTGAAAGAAAATCAGTCGCACTCGAAAACTGGA ACCTAACCCACATTTTAGAGATGAGGACTCCGTGGGACTCAACCAGTATT CCATGTATTTAGAGACGCAACATTGGTCCGGCTGAGTAGGAAAAACACCT ACAATATCCTGTCTTTGTTTTCTGTTGCATTCTGATGTAATGCTTCGGGG CATGTTTTTCGTTGGGGGGGGTTCGGAAGGGTGGCGGCTGAGATGAGCGG GGAAAGTACGTACCACACAGGCCAGCGGCGCAAGTGGTACCAGAAGAGAC TGTTGGTGCCGGTTGGGCCGCACTTTGTTCTTCCGTGGTTGGATTGTACT AGTAGCGCCTGTTTTTTTGTTTCTTTTTTTGCTGGAGCTATGGTGGCTCG CAACACTACTGTCAGACCTCGGCTGCAAGCACCGTTTGATCTTCTTGGTC AGTTTTGCGGCGGTGGTACGAAACAGGGCATGCTACTTTCCTCTAGCTCA GAGCCACCGTTGCGTGTATGAACCCCCGAGATCCCCACGCGCCCGCCAGA TACTCCAAAGTAGCTTGTAAACCCACGTTCAGCGCAACACACGAGCGCAT CGACACCACGTTTCAGCTCTCCATTTAATATGTAGATACCAAGAACGCGA GAGCTCCCCACCAAACACTAATATGCTCACTCGGAAAACCCACCACCCAA AACCAATTAGACGCCTAAATTCTACCTACATACTGCTGTATTTAGCTCCA GTAACTAACCAATTGATCGGTTATTTGGTCGCTTGTGATTGCCGCAGGTG GTCGAGCTGGACTGGCTGCGACCGCATGCAACCATCATCGCAAGCGGGTC GGACCAGCCTACAAAGAACGAGATCCCGGCTGAGGTCCGTTTTATTATTA TTTTTATTGTACCGCGTCGCTTGCAGACAGCTTATTGCATTTAGCTAGCT TCGAACATTCGCTTCCGGGTGACCTTTTTAGTTTTCTTTGTGGCTTGAGG TCCGTTTTGTTTTCTTTGTATCGCCTCGCTTCGCAGAGGGCTATTATAGC TAGCTATCAACATTCGCTTGCGAGTCATCTTTTCTGCTTTCTTTGTGGCA CACCTTGCCCGTGTTTTCAAAGCCGTCGTTGTACGCACATAGTCCAGTTG TCTTCTGTGGCGCGCCAAGCGTGCAACGTGTTTCTAGAAGCACGGCTCCT GCCTTCCTGCGAAGGGAATATGTTGCGATCGACGCTGCTCTATACGCACC CCCCCCCAAGACATGCCCGAAGACATGTGTGCAGAGGGCTCTCTGCCTGT TCGCAGTCGTGGTCGGACAGACAGCCCGAAACAGCAGCCACAATATCATA TCAAGAGACGCTCTCCAACACTCGCGCTGCGCGTACAACGAGTTCGACCA CCCTGCCTTTGTCGCCGCCGCCGTATGTTTTCGTCTGCCCCCCCCCCCGT CGCCACCAGGTGCAAAAGGCGAGCAAGATGGTGTGCGACCTGGTGCGGCA GTGCGAGCAGGTGGGGGAGCTCCGCAGCGCCATCAAGGCCGGGACCATGA CGAGGGAGGACGTGTACGCCGAGATCGGGGAAGTGGTGAACGGGTCGAAG CCCGGGCGGGTCGGAGAGGAGCTCATCCTCGTCGATCTCACCGGCACCGG GGCGCAGGACGCGGCCATCGGGCAGGTCGCCTGGGACATCCTCTCCAAGA CGTAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig18255:886..2990+

>mRNA_L-elsbetiae_contig18255.5281.1 ID=mRNA_L-elsbetiae_contig18255.5281.1|Name=mRNA_L-elsbetiae_contig18255.5281.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1446bp|location=Sequence derived from alignment at L-elsbetiae_contig18255:886..2990+ (Laminarionema elsbetiae ELsaHSoW15)
GAACAGGGCCTTCCCGCCGGATCCGGCATCTTCGTCGTCTGCGACGCCAC
CAACGGCGCCCCGCTGGCCATCTTCCAGGAGAACCGCTTCCTCACCGACC
TGCGGACGGGGGCCGCCGGCGCGGTCTCTGTCAAGCACTTCGCGGCCCGG
CACCACAAGAAGGTCGGCTTTGTGGGCGCCGGGGTCATCGCCGCCGCCAT
GGCGCGGGGCTCCAAGTGCGTCCACGAGTTCGACGAGGGCTTCGCGTACG
GGCTGGACCCGGCGAAGACGCAGGTGTGGGCGGACGAGATCGAGGCCGAG
CTGGGCTACAAGGTGCACGTCTGCAAGACTGCCGAGGAGTGCGTGCGCCA
GTCGGACGTGGTCTTCACCCAGACGCCCGGGTCCGAGACGGAACAGGGCC
TTCCCGCCGGATCCGGCATCTTCGTCGTCTGCGACGCCACCAACGGCGCC
CCGCTGGCCATCTTCCAGGAGAACCGCTTCCTCACCGACCTGCGGACGGG
GGCCGCCGGCGCGGTCTCTGTCAAGCACTTCGCGGCCCGGCACCACAAGA
AGGTCGGCTTTGTGGGCGCCGGGGTCATCGCCGCCGCCATGGCGCGGGGC
TCCAAGTGCGTCCACGAGTTCGACGAGGGCTTCGCGTACGGGCTGGACCC
GGCGAAGACGCAGGTGTGGGCGGACGAGATCGAGGCCGAGCTGGGCTACA
AGGTGCACGTCTGCAAGACTGCCGAGGAGTGCGTGCGCCAGTCGGACGTG
GTCTTCACCCAGACGCCCGGGTCCGAGACGGTGGTCGAGCTGGACTGGCT
GCGACCGCATGCAACCATCATCGCAAGCGGGTCGGACCAGCCTACAAAGA
ACGAGATCCCGGCTGAGGTGGTCGAGCTGGACTGGCTGCGACCGCATGCA
ACCATCATCGCAAGCGGGTCGGACCAGCCTACAAAGAACGAGATCCCGGC
TGAGGTGCAAAAGGCGAGCAAGATGGTGTGCGACCTGGTGCGGCAGTGCG
AGCAGGTGGGGGAGCTCCGCAGCGCCATCAAGGCCGGGACCATGACGAGG
GAGGACGTGTACGCCGAGATCGGGGAAGTGGTGAACGGGTCGAAGCCCGG
GCGGGTCGGAGAGGAGCTCATCCTCGTCGATCTCACCGGCACCGGGGCGC
AGGACGCGGCCATCGGGCAGGTCGCCTGGGACATCCTCTCCAAGACGTAG
GTGCAAAAGGCGAGCAAGATGGTGTGCGACCTGGTGCGGCAGTGCGAGCA
GGTGGGGGAGCTCCGCAGCGCCATCAAGGCCGGGACCATGACGAGGGAGG
ACGTGTACGCCGAGATCGGGGAAGTGGTGAACGGGTCGAAGCCCGGGCGG
GTCGGAGAGGAGCTCATCCTCGTCGATCTCACCGGCACCGGGGCGCAGGA
CGCGGCCATCGGGCAGGTCGCCTGGGACATCCTCTCCAAGACGTAG
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