mRNA_L-elsbetiae_contig18255.5281.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig18255.5281.1 vs. uniprot
Match: D8LRH6_ECTSI (Ornithine cyclodeaminase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRH6_ECTSI) HSP 1 Score: 390 bits (1001), Expect = 5.350e-134 Identity = 203/239 (84.94%), Postives = 207/239 (86.61%), Query Frame = 1 Query: 1 EQGLPAGSGIFVVCDATNGAPLAIFQENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDPAKTQVWADEIEAELGYKVHVCKTAEECVRQSDVVFTQTPGSETVVELDWLRPHATIIASGSDQPTKNEIPAEVQKASKMVCDLVRQCEQVGELRSAIKAGTMTREDVYAEIGEVVNGSKPGRVGEELILVDLTGTGAQDAAIGQVAWDILSK 717 E+GLPAGSGIFVVCDATNGAPLAIFQENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLD KT+ WADEIEAELGYKV VELDWLRPHATIIASGSDQPTKNEIPAEVQKASKMVCDLVRQCEQVGELRSAIKAG MTR+DVYAEIG+VVNG KPGR GEELILVDLTGTGAQDAAIGQVAWDILSK Sbjct: 135 EKGLPAGSGIFVVCDATNGAPLAIFQENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDVVKTKEWADEIEAELGYKV--------------------------VELDWLRPHATIIASGSDQPTKNEIPAEVQKASKMVCDLVRQCEQVGELRSAIKAGVMTRDDVYAEIGDVVNGDKPGRTGEELILVDLTGTGAQDAAIGQVAWDILSK 347
BLAST of mRNA_L-elsbetiae_contig18255.5281.1 vs. uniprot
Match: A0A7S2RSZ5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RSZ5_9STRA) HSP 1 Score: 362 bits (928), Expect = 3.520e-122 Identity = 176/239 (73.64%), Postives = 206/239 (86.19%), Query Frame = 1 Query: 1 EQGLPAGSGIFVVCDATNGAPLAIFQENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDPAKTQVWADEIEAELGYKVHVCKTAEECVRQSDVVFTQTPGSETVVELDWLRPHATIIASGSDQPTKNEIPAEVQKASKMVCDLVRQCEQVGELRSAIKAGTMTREDVYAEIGEVVNGSKPGRVGEELILVDLTGTGAQDAAIGQVAWDILSK 717 E+GLP GSGIF+VCDATNGAPLAI QENR+LTDLRTGAAGA+SVKHFA+ HKKV F+G GVIA AMAR + +H+FD+GFA+GLD +AD I ++LGY V VC TAEE VR +DV+FTQT G+ V++LDWL+PHATIIASGSDQPTKNEIP EVQ+ SK+VCDLVRQC +VGELRSAI AG M+ +DVYAEIGEVVNG+KPGR G+ELILVDLTGTGAQDAAIGQVAW++LS+ Sbjct: 159 EKGLPPGSGIFIVCDATNGAPLAIMQENRYLTDLRTGAAGAISVKHFASPKHKKVAFIGTGVIAQAMARATNTLHQFDQGFAFGLDDGMNAQFADTIHSQLGYPVQVCATAEEAVRSADVIFTQTTGANHVLQLDWLQPHATIIASGSDQPTKNEIPPEVQRQSKLVCDLVRQCSRVGELRSAIAAGVMSEDDVYAEIGEVVNGTKPGREGDELILVDLTGTGAQDAAIGQVAWEVLSQ 397
BLAST of mRNA_L-elsbetiae_contig18255.5281.1 vs. uniprot
Match: A0A7S0H4T2_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H4T2_9EUKA) HSP 1 Score: 343 bits (881), Expect = 1.010e-115 Identity = 174/240 (72.50%), Postives = 201/240 (83.75%), Query Frame = 1 Query: 1 EQGLPAGSGIFVVCDATNGAPLAIFQENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDPAKTQVWADEIEAELGYKVHVCKTAEECVRQSDVVFTQTPGSETVVELDWLRPHATIIASGSDQPTKNEIPAEVQKASKMVCDLVRQCEQVGELRSAIKAGTMTREDVYAEIGEVVNGSKPGRVGEELILVDLTGTGAQDAAIGQVAWDILSKT 720 ++GLP GSGIFVV DATNG PLAIFQENR+LTDLRTGAAGAVSVKHFAA+ H KV F+G G+IA AMAR S VH + E +GLD A+TQ + DE+EAEL + VCK+AEE V SDV+FTQTP ++TV+EL WL+PHATIIASGSDQ TKNEIP EV KASKMVCDLVRQC +VGELRSA++AG M DVYAEIGEVVNG+KPGR G+ELI+VDLTGTGAQDAAIGQVAW++L + Sbjct: 111 DKGLPPGSGIFVVIDATNGFPLAIFQENRYLTDLRTGAAGAVSVKHFAAKDHTKVCFLGTGMIAGAMARASSEVHGWTEANCFGLDEAQTQRFCDEMEAELKFPFKVCKSAEEAVGSSDVIFTQTPAAQTVLELGWLKPHATIIASGSDQSTKNEIPVEVMKASKMVCDLVRQCSKVGELRSALEAGVMKETDVYAEIGEVVNGTKPGREGDELIVVDLTGTGAQDAAIGQVAWNVLGAS 350
BLAST of mRNA_L-elsbetiae_contig18255.5281.1 vs. uniprot
Match: A0A6T5N8F9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5N8F9_HETAK) HSP 1 Score: 334 bits (856), Expect = 6.730e-112 Identity = 167/240 (69.58%), Postives = 193/240 (80.42%), Query Frame = 1 Query: 1 EQGLPAGSGIFVVCDATNGAPLAIFQENRFLTDLRTGAAGAVSVKHFAAR-HHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDPAKTQVWADEIEAELGYKVHVCKTAEECVRQSDVVFTQTPGSETVVELDWLRPHATIIASGSDQPTKNEIPAEVQKASKMVCDLVRQCEQVGELRSAIKAGTMTREDVYAEIGEVVNGSKPGRVGEELILVDLTGTGAQDAAIGQVAWDILSK 717 E+GL GSGIF+VCDATNGAPL IFQENR+LTDLRTGAAGA+SVK+F A HK + F+G G IA +MA+G+ CVH F++GF YGLD A + +A EIEA GY V VC TAEE VR DVVFTQT GS V+E DWLRPHATIIASGSDQPTK EIP +V +KMVCDL QC + GELRSA+K G MT DV+AE+GEVVNG+K GR G+EL+LVDLTGTGAQDAAIGQVAW+ILS+ Sbjct: 113 EKGLSPGSGIFIVCDATNGAPLGIFQENRYLTDLRTGAAGALSVKYFGASPKHKNISFIGTGAIAESMAKGTACVHNFEQGFCYGLDRAMNERFAAEIEATCGYPVKVCDTAEEAVRSGDVVFTQTVGSSVVLEGDWLRPHATIIASGSDQPTKQEIPVDVMARAKMVCDLTAQCARFGELRSALKEGAMTEADVHAELGEVVNGTKAGREGDELVLVDLTGTGAQDAAIGQVAWEILSQ 352
BLAST of mRNA_L-elsbetiae_contig18255.5281.1 vs. uniprot
Match: A0A7R9UBH1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBH1_9STRA) HSP 1 Score: 321 bits (822), Expect = 1.220e-106 Identity = 160/239 (66.95%), Postives = 192/239 (80.33%), Query Frame = 1 Query: 1 EQGLPAGSGIFVVCDATNGAPLAIFQENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDPAKTQVWADEIEAELGYKVHVCKTAEECVRQSDVVFTQTPGSETVVELDWLRPHATIIASGSDQPTKNEIPAEVQKASKMVCDLVRQCEQVGELRSAIKAGTMTREDVYAEIGEVVNGSKPGRVGEELILVDLTGTGAQDAAIGQVAWDILSK 717 ++GLP GSG+F+VCDATNGAPL IFQENR++TDLRTGAAGAV+VKH R KV FVG GVI AMA VH+F G +GLD A+++ +A +I ELGY + VC T E+ + +DVVFT TP + V+EL L+P ATIIASGSDQPTK EIP EVQKAS+MVCDLVRQC +VGELRSAI+AG MT +DV+AE+GE+VNG+KPGRVG+ELILVDLTGTGAQDAAIGQVAW++L Sbjct: 121 DKGLPPGSGVFIVCDATNGAPLGIFQENRYMTDLRTGAAGAVAVKHCVNRDADKVCFVGGGVINLAMATACASVHDFRSGTVFGLDMAQSEAFAKQITDELGYPMTVCDTVEDALADADVVFTATPAAAPVLELGMLKPSATIIASGSDQPTKQEIPVEVQKASRMVCDLVRQCSRVGELRSAIEAGVMTEDDVHAELGEIVNGTKPGRVGDELILVDLTGTGAQDAAIGQVAWEVLGS 359
BLAST of mRNA_L-elsbetiae_contig18255.5281.1 vs. uniprot
Match: A0A7S2XZG6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZG6_9STRA) HSP 1 Score: 305 bits (782), Expect = 3.710e-101 Identity = 145/208 (69.71%), Postives = 177/208 (85.10%), Query Frame = 1 Query: 1 EQGLPAGSGIFVVCDATNGAPLAIFQENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDPAKTQVWADEIEAELGYKVHVCKTAEECVRQSDVVFTQTPGSETVVELDWLRPHATIIASGSDQPTKNEIPAEVQKASKMVCDLVRQCEQVGELRSAIKAGTMTREDVYAEIGEVVNGSKPG 624 E+GLP GSG+F+VC+A NGAPL IFQENR+LTDLRTGAAGA+SVK+F A+ H KV F+GAGVIA AMAR S CVH+F EGFAYGLD A+T+ + E+ +ELG+ VC+TAEE VR +DV+FTQT G+ V++LDWL+PHATIIASGSDQPTKNEIP++V K SKM+CDLVRQC +VGELR+AIK G MT +DV+AEIG+VV G+KPG Sbjct: 112 EKGLPPGSGVFIVCNAVNGAPLGIFQENRYLTDLRTGAAGAISVKNFVAKEHTKVAFIGAGVIAQAMARASSCVHKFTEGFAYGLDTAQTEGFVSEMSSELGFPFKVCETAEEAVRSADVIFTQTTGAAPVLQLDWLKPHATIIASGSDQPTKNEIPSDVMKKSKMICDLVRQCSKVGELRTAIKEGVMTEDDVFAEIGDVVLGNKPG 319
BLAST of mRNA_L-elsbetiae_contig18255.5281.1 vs. uniprot
Match: C1MM99_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1MM99_MICPC) HSP 1 Score: 295 bits (756), Expect = 7.320e-97 Identity = 143/237 (60.34%), Postives = 181/237 (76.37%), Query Frame = 1 Query: 1 EQGLPAGSGIFVVCDATNGAPLAIFQENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDPAKTQVWADEIEAELGYKVHVCKTAEECVRQSDVVFTQTPGSETVVELDWLRPHATIIASGSDQPTKNEIPAEVQKASKMVCDLVRQCEQVGELRSAIKAGTMTREDVYAEIGEVVNGSKPGRVGEELILVDLTGTGAQDAAIGQVAWDIL 711 E+GLPAGSG+FVVCDATNG P A+ ENR+LTD+RTGAAGAV VKH A + K V F+G GVIA +MAR + V+ F++G+ Y + K + D+++ ELGY C +AEE VR +DVVFTQTPG E V++L WL+PHATIIASGSDQPTKNEIP EV K +K++ D+ QC +VGE+RSA+ AG M DV+AE+GE++NGSK GR G+ELI+ DLTGTGAQDAAIG ++L Sbjct: 107 EKGLPAGSGVFVVCDATNGGPKAVLHENRYLTDMRTGAAGAVCVKHLAVKGAKSVAFIGTGVIAESMARSTATVYGFEQGYGYSRNIDKATAFCDKMQKELGYDFKACDSAEEAVRNADVVFTQTPGGEWVLDLAWLKPHATIIASGSDQPTKNEIPPEVMKKAKVITDITAQCVRVGEVRSAVAAGVMKESDVHAELGEIINGSKKGRQGKELIVCDLTGTGAQDAAIGSYVMNVL 343
BLAST of mRNA_L-elsbetiae_contig18255.5281.1 vs. uniprot
Match: C1E6G7_MICCC (Uncharacterized protein n=2 Tax=Micromonas TaxID=38832 RepID=C1E6G7_MICCC) HSP 1 Score: 297 bits (760), Expect = 2.820e-95 Identity = 145/237 (61.18%), Postives = 179/237 (75.53%), Query Frame = 1 Query: 1 EQGLPAGSGIFVVCDATNGAPLAIFQENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDPAKTQVWADEIEAELGYKVHVCKTAEECVRQSDVVFTQTPGSETVVELDWLRPHATIIASGSDQPTKNEIPAEVQKASKMVCDLVRQCEQVGELRSAIKAGTMTREDVYAEIGEVVNGSKPGRVGEELILVDLTGTGAQDAAIGQVAWDIL 711 ++GLPAGSG+FVVCDATNG P A+ ENR+LTDLRTGAAGAV+VKH A + K V F+G GVIA AMAR S VH F++G+ Y D K + D++ AELGY C +AEE VR +DVVFTQTPG E V++L WL+PHA I+ASGSDQPTKNEIP V K +++V D+ QC +VGELRSA+ AG M DV+A++GEV+NG+K GR G+ELI+ DLTGTGAQDAAIG +L Sbjct: 275 KKGLPAGSGVFVVCDATNGGPKAVLHENRYLTDLRTGAAGAVAVKHLAIKDAKSVAFIGTGVIAEAMARSSATVHGFEQGYGYSRDMTKNSAFCDKMSAELGYAFTPCSSAEEAVRNADVVFTQTPGGEWVLDLKWLKPHALIVASGSDQPTKNEIPPAVMKKARVVTDITAQCLRVGELRSAVAAGVMKETDVHAQLGEVINGTKKGRTGKELIVCDLTGTGAQDAAIGSYVMKVL 511
BLAST of mRNA_L-elsbetiae_contig18255.5281.1 vs. uniprot
Match: A0A7S0GND7_MICPS (Hypothetical protein (Fragment) n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0GND7_MICPS) HSP 1 Score: 289 bits (739), Expect = 9.070e-94 Identity = 142/238 (59.66%), Postives = 179/238 (75.21%), Query Frame = 1 Query: 1 EQGLPAGSGIFVVCDATNGAPLAIFQENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDPAKTQVWADEIEAELGYKVHVCKTAEECVRQSDVVFTQTPGSETVVELDWLRPHATIIASGSDQPTKNEIPAEVQKASKMVCDLVRQCEQVGELRSAIKAGTMTREDVYAEIGEVVNGSKPGRVGEELILVDLTGTGAQDAAIGQVAWDILS 714 E+GLPAGSG+FVVCDA NG P AI ENR+LTDLRTGAAGAV+VKH AA+ K V F+G GVIA AMAR + V +F+E FAY P K+ + ++ ELG+ + C TAE+ VR +DVVFTQTPG E V+E +WLRPHA ++ SGSDQPTKNEIP + +K+V D+ QC +VGE+RSAI+AG MT EDV+AE+G++V+G GR G+ELI+ DLTGTGAQDAAIG + L+ Sbjct: 120 EKGLPAGSGVFVVCDAANGGPKAILHENRYLTDLRTGAAGAVAVKHLAAKRAKSVAFIGTGVIAEAMARATATVFDFEEAFAYSPSPKKSSTFCKKMSEELGFPHYACATAEDAVRAADVVFTQTPGGEWVLEEEWLRPHALVVCSGSDQPTKNEIPPAILAGAKVVTDITAQCARVGEVRSAIEAGVMTAEDVHAELGQIVSGKVKGRKGKELIVCDLTGTGAQDAAIGSHVMEALA 357
BLAST of mRNA_L-elsbetiae_contig18255.5281.1 vs. uniprot
Match: C1MMA0_MICPC (Predicted protein (Fragment) n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MMA0_MICPC) HSP 1 Score: 287 bits (735), Expect = 1.110e-93 Identity = 144/230 (62.61%), Postives = 175/230 (76.09%), Query Frame = 1 Query: 1 EQGLPAGSGIFVVCDATNGAPLAIFQENRFLTDLRTGAAGAVSVKHFAARHHKKVGFVGAGVIAAAMARGSKCVHEFDEGFAYGLDPAKTQVWADEIEAELGYKVHVCKTAEECVRQSDVVFTQTPGSETVVELDWLRPHATIIASGSDQPTKNEIPAEVQKASKMVCDLVRQCEQVGELRSAIKAGTMTREDVYAEIGEVVNGSKPGRVGEELILVDLTGTGAQDAAIG 690 E+GLPAGSG+FVVCDATNG P A+ ENR+LTD+RTGAAGAV VKH A K V F+G GVIA AMA+ + VH F+E FAY P K+ + ++ ELGY + C TAE+ VR +DVVFTQTPG E V+E WLRPHATIIASGSDQPTKNEIP E+ +K+V D+ QC +VGELRSAI+AG MT +V+AEIG++++G + GRVG E I+ DLTGTGAQDAAIG Sbjct: 111 EKGLPAGSGVFVVCDATNGGPKAVLHENRYLTDMRTGAAGAVCVKHLAP-DAKSVAFIGTGVIAEAMAKATATVHGFEEAFAYARSPQKSSSFCKKMTKELGYPFYACATAEDAVRNADVVFTQTPGGEWVLEEQWLRPHATIIASGSDQPTKNEIPPEILMNAKVVTDITAQCSRVGELRSAIEAGLMTEANVHAEIGQIISGEREGRVGNERIVCDLTGTGAQDAAIG 339 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18255.5281.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig18255.5281.1 >prot_L-elsbetiae_contig18255.5281.1 ID=prot_L-elsbetiae_contig18255.5281.1|Name=mRNA_L-elsbetiae_contig18255.5281.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=241bp EQGLPAGSGIFVVCDATNGAPLAIFQENRFLTDLRTGAAGAVSVKHFAARback to top mRNA from alignment at L-elsbetiae_contig18255:886..2990+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig18255.5281.1 ID=mRNA_L-elsbetiae_contig18255.5281.1|Name=mRNA_L-elsbetiae_contig18255.5281.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2105bp|location=Sequence derived from alignment at L-elsbetiae_contig18255:886..2990+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig18255:886..2990+ >mRNA_L-elsbetiae_contig18255.5281.1 ID=mRNA_L-elsbetiae_contig18255.5281.1|Name=mRNA_L-elsbetiae_contig18255.5281.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1446bp|location=Sequence derived from alignment at L-elsbetiae_contig18255:886..2990+ (Laminarionema elsbetiae ELsaHSoW15)back to top |