mRNA_L-elsbetiae_contig1823.5271.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1823.5271.1
Unique NamemRNA_L-elsbetiae_contig1823.5271.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1823.5271.1 vs. uniprot
Match: D8LDN4_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDN4_ECTSI)

HSP 1 Score: 408 bits (1049), Expect = 2.890e-136
Identity = 246/412 (59.71%), Postives = 283/412 (68.69%), Query Frame = 1
Query:  241 PPTQGERCKAVMLAPSPAGATAGGGGEQVFRQTNPRNRSEQSREQQQDISIQVSSVNVGETLRVPLSGKTVPFRVVKRRGRGFSSVVFECEREKEEDGGPSS------VTVKVMSGGASGMGACLHEVETLAFLKLKRQEAGLTHERSRFAELASWFYKRSAVGGVDHVCLVFSGGGLSLREAMSARSPPKLGVGVAALGSAGRQGASPPLLAWEAREVVEVARGLLEGIAFLHSVGLIHADIKPENIALYPPSPPSVATTPAXXXAKPP-----APFDLRLIDLGNAVFAADALPGVTAGTPSYLSPEARRGLQWGPKVDVWAAGCVLYEIVSGGRVGTGAAGEIG-----------FGSGPG-------GPRAATGGALAAVVGLVRRLLAEDADKRPTAVEALQDALFS 1389
            PPT   R          +G     GGE+V +     +R  Q + QQQ       S+NVGE + VPL+GK+VPFRVVKRR +GF+SVVFEC  E+EE  G  +      VTVKV+SGG SGMGACLHEVETLAFLK+KRQEAGLT ERSRFAELASWFY+RSAVGGVDHVCLVF GGGLSLREAMSARSPP +    + + ++    ++P LLAW+A EVVEVARGLLEGIAFLHSVGL+HADIKP+N+ALYP           XXX         APFDLRLIDLGNAVFA+D +PGVTAGTPSYLSPEA  GL WGP VDVWA GCVL+EI++GGRVG  AA  IG             SGP        G  A +G  L  VVGLV+RLLAED   RP+A EAL+D +FS
Sbjct:   34 PPTHVARSAGAAPTAGASGPAQVSGGEEVAKHVKTPHRRRQQQPQQQ------VSMNVGEVMSVPLAGKSVPFRVVKRRSKGFNSVVFECREEQEEAMGDEAYRPLRVVTVKVLSGGESGMGACLHEVETLAFLKVKRQEAGLTRERSRFAELASWFYRRSAVGGVDHVCLVFRGGGLSLREAMSARSPP-ISTAQSGVTASNMPSSAPVLLAWKAHEVVEVARGLLEGIAFLHSVGLVHADIKPDNVALYPXXXXXXXXXXXXXXXXXXXXXAQAPFDLRLIDLGNAVFASDTVPGVTAGTPSYLSPEASGGLAWGPPVDVWAVGCVLHEILTGGRVGAAAAFTIGNEGRGGDSSGCATSGPSAGLSASAGLSAGSGPELTGVVGLVKRLLAEDVGVRPSAEEALKDVVFS 438          
BLAST of mRNA_L-elsbetiae_contig1823.5271.1 vs. uniprot
Match: A0A5J4XTC6_9CHLO (Serine threonine-kinase AFC3-like n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XTC6_9CHLO)

HSP 1 Score: 93.2 bits (230), Expect = 8.340e-17
Identity = 78/270 (28.89%), Postives = 112/270 (41.48%), Query Frame = 1
Query:  409 NVGETLRVPLSGKTVPFRVVKRRGRGFSSVVFECEREKEEDGGPSSVTVKVMSGGASGMGACLHEVETLAFLKLKRQEAGLTHERSRFAELASWFYKRSAVGGVDHVCLVFSGGGLSLREAMSARSPPKLGVGVAALGSAGRQGASPPLLAWEAREVVEVARGLLEGIAFLHSVGLIHADIKPENIALYPPSPPSVATTPAXXXAKP--PAPFDLRLIDLGNAVFAADALPGVTAGTPSYLSPEARRGLQWGPKVDVWAAGCVLYEIVSG 1212
            N+GE L       T  ++++ + G G    V EC   K      S V +K++        A + E+E L  L     E      R     L  WF  R       HVC+VF   GLSL + +         + V                      V    R LLE +A+LH + LIH D+KPENI L        + TP      P  P+  D+++ID G+A F+ +        T  Y +PE   GL W  + D+W+ GC+L E+V+G
Sbjct:   96 NLGENL-------TSRYKILSKMGEGTFGRVLECWDRKHR----SYVAIKIVRNVKKYRDAAMIELEVLNTL-----EKNDPQNRWHCVHLQEWFDYRG------HVCMVFEKLGLSLYDFLRVNQYRPFRIDV----------------------VRAFGRQLLESVAYLHGLDLIHTDLKPENILLAACDDDRKSPTPGIRKTAPRQPSTSDIKVIDFGSATFS-EQYHSTIVSTRHYRAPEVILGLGWSFEADIWSIGCILVELVTG 320          
BLAST of mRNA_L-elsbetiae_contig1823.5271.1 vs. uniprot
Match: A0A5P1F342_ASPOF (Protein kinase domain-containing protein n=1 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1F342_ASPOF)

HSP 1 Score: 90.1 bits (222), Expect = 7.530e-16
Identity = 70/256 (27.34%), Postives = 114/256 (44.53%), Query Frame = 1
Query:  448 TVPFRVVKRRGRGFSSVVFEC-EREKEEDGGPSSVTVKVMSGGASGMGACLHEVETLAFLKLKRQEAGLTHERSRFAELASWFYKRSAVGGVDHVCLVFSGGGLSLREAMSARSPPKLGVGVAALGSAGRQGASPPLLAWEAREVVEVARGLLEGIAFLHSVGLIHADIKPENIALYPPSPPSVATTPAXXXAKPPAPFDLRLIDLGNAVFAADALPGVTAGTPSYLSPEARRGLQWGPKVDVWAAGCVLYEIVSG 1212
            T  +++ ++ G G    V EC +REK+E      V +K++        A + E++ L  LK +   A      SR  ++ +WF  R      +H+C+VF   G SL + +         + +                      V E+ R LLE IAF+H + L+H D+KPENI    P    V+        + P    +++ID G++ + + A   V + T  Y +PE   G  W    D+W+ GC+L E+ SG
Sbjct:   92 TSRYKIYRKMGEGTFGQVLECWDREKKE-----MVAIKIVRAVDKYREAAMIEIDVLQRLKKQDDSA------SRCVQIRNWFDYR------NHICIVFEKLGPSLYDFLRKNGYRPFPIDL----------------------VRELGRQLLESIAFMHDLHLVHTDLKPENILFVSPEYMKVSHHKVGSSIRLPKSSAIKVIDFGSSTYDSQAHNYVVS-TRHYRAPEVILGFGWSYPCDIWSVGCILVELCSG 307          
BLAST of mRNA_L-elsbetiae_contig1823.5271.1 vs. uniprot
Match: UPI00098DEE4F (serine/threonine-protein kinase AFC2-like isoform X2 n=1 Tax=Asparagus officinalis TaxID=4686 RepID=UPI00098DEE4F)

HSP 1 Score: 88.6 bits (218), Expect = 1.080e-15
Identity = 69/252 (27.38%), Postives = 112/252 (44.44%), Query Frame = 1
Query:  460 RVVKRRGRGFSSVVFEC-EREKEEDGGPSSVTVKVMSGGASGMGACLHEVETLAFLKLKRQEAGLTHERSRFAELASWFYKRSAVGGVDHVCLVFSGGGLSLREAMSARSPPKLGVGVAALGSAGRQGASPPLLAWEAREVVEVARGLLEGIAFLHSVGLIHADIKPENIALYPPSPPSVATTPAXXXAKPPAPFDLRLIDLGNAVFAADALPGVTAGTPSYLSPEARRGLQWGPKVDVWAAGCVLYEIVSG 1212
            ++ ++ G G    V EC +REK+E      V +K++        A + E++ L  LK +   A      SR  ++ +WF  R      +H+C+VF   G SL + +         + +                      V E+ R LLE IAF+H + L+H D+KPENI    P    V+        + P    +++ID G++ + + A   V + T  Y +PE   G  W    D+W+ GC+L E+ SG
Sbjct:    8 KIYRKMGEGTFGQVLECWDREKKE-----MVAIKIVRAVDKYREAAMIEIDVLQRLKKQDDSA------SRCVQIRNWFDYR------NHICIVFEKLGPSLYDFLRKNGYRPFPIDL----------------------VRELGRQLLESIAFMHDLHLVHTDLKPENILFVSPEYMKVSHHKVGSSIRLPKSSAIKVIDFGSSTYDSQAHNYVVS-TRHYRAPEVILGFGWSYPCDIWSVGCILVELCSG 219          
BLAST of mRNA_L-elsbetiae_contig1823.5271.1 vs. uniprot
Match: A0A388JZC5_CHABU (Protein kinase domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JZC5_CHABU)

HSP 1 Score: 88.2 bits (217), Expect = 3.800e-15
Identity = 78/261 (29.89%), Postives = 117/261 (44.83%), Query Frame = 1
Query:  448 TVPFRVVKRRGRGFSSVVFEC-EREKEEDGGPSSVTVKVMSGGASGMGACLHEVETLAFLKLKRQEAGLTHERSR-FAELASWFYKRSAVGGVDHVCLVFSGGGLSLREAMSARSPPKLGVGVAALGSAGRQGASPPLLAWEAREVVEVARGLLEGIAFLHSVGLIHADIKPENIAL----YPPSPPSVATTPAXXXAKPPAPFDLRLIDLGNAVFAADALPGVTAGTPSYLSPEARRGLQWGPKVDVWAAGCVLYEIVSG 1212
            T  ++++ + G G    V EC +REK+E      V VKV+        A + E++ L  L  K  + G     SR   +L  WF  R      +HVC+VF   G SL + +   +     + +                      V +    LLE +AF+H + LIH D+KPENI L    Y   P   A+ P     + P   +++LID G+A F +     V + T  Y +PE   GL W    D+W+ GC+L E+V+G
Sbjct:  153 TPRYKILSKMGEGTFGRVLECWDREKQE-----FVAVKVIRNVPKYRDAAMIEIDVLHTLA-KHDKTG-----SRGCVQLKHWFDYR------NHVCMVFERLGPSLYDFLRKNNYRPFAIDL----------------------VRDFGVQLLEAVAFMHDLSLIHTDLKPENILLVSSEYAKYPEPKASQPGKHFRRVPLSSEIKLIDFGSATFDSHYHCSVVS-TRHYRAPEVILGLGWTYPCDLWSVGCILVELVTG 373          
BLAST of mRNA_L-elsbetiae_contig1823.5271.1 vs. uniprot
Match: I1MUK1_SOYBN (Protein kinase domain-containing protein n=6 Tax=Phaseoleae TaxID=163735 RepID=I1MUK1_SOYBN)

HSP 1 Score: 87.8 bits (216), Expect = 4.690e-15
Identity = 72/265 (27.17%), Postives = 120/265 (45.28%), Query Frame = 1
Query:  448 TVPFRVVKRRGRGFSSVVFEC-EREKEEDGGPSSVTVKVMSGGASGMGACLHEVETLAFLKLKRQEAGLTHERSRFAELASWFYKRSAVGGVDHVCLVFSGGGLSLREAMSARSPPKLGVGVAALGSAGRQGASPPLLAWEAREVVEVARGLLEGIAFLHSVGLIHADIKPENIALYPPSPPSV------ATTPAXXXAKPPAPFDLRLIDLGNAVFAADALPGVTAGTPSYLSPEARRGLQWGPKVDVWAAGCVLYEIVSGGRV 1221
            T  +++  + G G    V EC +RE++E      V VK++ G      A + E+E L  L  K  + G     +R  ++ +WF  R      +H+C+VF   G SL + +   +     + +                      V E+ R LLE IAF+H + +IH D+KPENI L  P    V      + +P+    + P    +++ID G+  +  +    + + T  Y +PE   GL W    D+W+ GC+L E+ +GG +
Sbjct:   95 TSRYKIHSKMGEGTFGQVLECWDRERKE-----MVAVKIVRGIKKYREAAMIEIEVLQQLG-KHDKGG-----NRCVQIRNWFDYR------NHICIVFEKLGPSLYDFLRKNNYRSFPIDL----------------------VREIGRQLLECIAFMHDLRMIHTDLKPENILLVSPEYVKVPDYKSSSRSPSSYFKRVPKSSAIKVIDFGSTTYEREDQNYIVS-TRHYRAPEVILGLGWSYPCDIWSVGCILVELCTGGAL 319          
BLAST of mRNA_L-elsbetiae_contig1823.5271.1 vs. uniprot
Match: UPI00192225A6 (serine/threonine-protein kinase AFC2-like isoform X1 n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=UPI00192225A6)

HSP 1 Score: 87.8 bits (216), Expect = 4.710e-15
Identity = 77/263 (29.28%), Postives = 117/263 (44.49%), Query Frame = 1
Query:  448 TVPFRVVKRRGRGFSSVVFEC-EREKEEDGGPSSVTVKVMSGGASGMGACLHEVETLAFLKLKRQEAGLTHERSRFAELASWFYKRSAVGGVDHVCLVFSGGGLSLREAMSARSPPKLGVGVAALGSAGRQGASPPLLAWEAREVVEVARGLLEGIAFLHSVGLIHADIKPENIALYPPS----PPSVATTPAXXXA---KPPAPFDLRLIDLGNAVFAADALPGVTAGTPSYLSPEARRGLQWGPKVDVWAAGCVLYEIVSG 1212
            T  +++ ++ G G    V EC +RE +E      V +KV+        A + E+E L +L    +  G      R  +L +WF  R      +H+C+VF   G SL + +   +     V +                      V E+ R LLE +AF+H + LIH D+KPENI    P     P  V +  A       + P    +++IDLG+AVF       + + T  Y +PE   GL WG   D+W+ GC+L E+ SG
Sbjct:   94 TSRYKIYRKVGEGTFGQVLECLDRETKE-----MVAIKVVRSIKKYREAAMMELEVLQYLGKHDRNGG------RCVQLLNWFDYR------NHICIVFEMLGPSLYDFLQKNNYRPFPVDL----------------------VRELGRQLLECVAFIHDLHLIHTDLKPENILFVSPEYVKIPDEVISCSAIRDTCHRRLPKSSAIKVIDLGSAVFEHQDHNYIVS-TRHYRAPEVILGLGWGYPCDLWSVGCILVELCSG 316          
BLAST of mRNA_L-elsbetiae_contig1823.5271.1 vs. uniprot
Match: A0A2P6VF93_9CHLO (ATP binding cassette subfamily B4 isoform 2 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VF93_9CHLO)

HSP 1 Score: 89.0 bits (219), Expect = 6.170e-15
Identity = 76/252 (30.16%), Postives = 106/252 (42.06%), Query Frame = 1
Query:  457 FRVVKRRGRGFSSVVFECEREKEEDGGPSSVTVKVMSGGASGMGACLHEVETLAFLKLKRQEAGLTHERSRFAELASWFYKRSAVGGVDHVCLVFSGGGLSLREAMSARSPPKLGVGVAALGSAGRQGASPPLLAWEAREVVEVARGLLEGIAFLHSVGLIHADIKPENIALYPPSPPSVATTPAXXXAKPPAPFDLRLIDLGNAVFAADALPGVTAGTPSYLSPEARRGLQWGPKVDVWAAGCVLYEIVSG 1212
            F+++++ G G    V EC      D     V VKV+        A + E+E L  L      A          +L  WF  R       HVC+VF   G SL + +                   R G  P  LA         AR LLE +AF+H + L+H D+KPENI +          T      + PA   +RLID G+A F AD    + + T  Y +PE   GL W    D+W+ GC+L E+++G
Sbjct:  102 FKIMRKFGEGTFGQVLECWDRTRRD----YVAVKVIRNIQKYRDAAMIELEALNTLA-----ANDPGREKHCVQLLEWFNYRG------HVCMVFERLGPSLYDFLR------------------RNGYKPFPLAM----AQSFARQLLESVAFMHELQLVHTDLKPENILVLNQEVQDPPPTGKWVGKRLPASDTIRLIDFGSATFEADYHSTIVS-TRHYRAPEVILGLGWSFPCDIWSVGCILVELLTG 315          
BLAST of mRNA_L-elsbetiae_contig1823.5271.1 vs. uniprot
Match: A0A4Y7KU39_PAPSO (Protein kinase domain-containing protein n=3 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7KU39_PAPSO)

HSP 1 Score: 87.4 bits (215), Expect = 6.470e-15
Identity = 75/264 (28.41%), Postives = 114/264 (43.18%), Query Frame = 1
Query:  448 TVPFRVVKRRGRGFSSVVFEC-EREKEEDGGPSSVTVKVMSGGASGMGACLHEVETLAFLKLKRQEAGLTHERSRFAELASWFYKRSAVGGVDHVCLVFSGGGLSLREAMSARSPPKLGVGVAALGSAGRQGASPPLLAWEAREVVEVARGLLEGIAFLHSVGLIHADIKPENIALYPPSPPSV--------ATTPAXXXAKPPAPFDLRLIDLGNAVFAADALPGVTAGTPSYLSPEARRGLQWGPKVDVWAAGCVLYEIVSG 1212
            T+ ++++ + G G    V EC + EK E     +V +KV+        A + E++ L   KL R + G     +R  ++ +WF  R      +H+C+VF   G SL + +   S     + +                      V E+ R LLE +AF+H + LIH D+KPENI    P    V         T  A      P    ++LID G+  F       V + T  Y +PE   GL W    D+W+ GC+L E+ SG
Sbjct:   91 TLRYKILSKMGEGTFGQVLECWDNEKRE-----AVAIKVVRSIQKYREAAMIEIDVLQ--KLARHDVG----GARCVQIRNWFDYR------NHICIVFEKLGPSLYDFLRKNSYRSFPIDL----------------------VRELGRQLLESVAFMHDLRLIHTDLKPENILFVSPEYIRVPDYKYMPRTTKDACYFRNLPLSSSIKLIDFGSTTFEHQDHTYVVS-TRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314          
BLAST of mRNA_L-elsbetiae_contig1823.5271.1 vs. uniprot
Match: K7MLD0_SOYBN (Protein kinase domain-containing protein n=2 Tax=Phaseoleae TaxID=163735 RepID=K7MLD0_SOYBN)

HSP 1 Score: 86.3 bits (212), Expect = 6.840e-15
Identity = 71/261 (27.20%), Postives = 118/261 (45.21%), Query Frame = 1
Query:  460 RVVKRRGRGFSSVVFEC-EREKEEDGGPSSVTVKVMSGGASGMGACLHEVETLAFLKLKRQEAGLTHERSRFAELASWFYKRSAVGGVDHVCLVFSGGGLSLREAMSARSPPKLGVGVAALGSAGRQGASPPLLAWEAREVVEVARGLLEGIAFLHSVGLIHADIKPENIALYPPSPPSV------ATTPAXXXAKPPAPFDLRLIDLGNAVFAADALPGVTAGTPSYLSPEARRGLQWGPKVDVWAAGCVLYEIVSGGRV 1221
            ++  + G G    V EC +RE++E      V VK++ G      A + E+E L  L  K  + G     +R  ++ +WF  R      +H+C+VF   G SL + +   +     + +                      V E+ R LLE IAF+H + +IH D+KPENI L  P    V      + +P+    + P    +++ID G+  +  +    + + T  Y +PE   GL W    D+W+ GC+L E+ +GG +
Sbjct:    5 KIHSKMGEGTFGQVLECWDRERKE-----MVAVKIVRGIKKYREAAMIEIEVLQQLG-KHDKGG-----NRCVQIRNWFDYR------NHICIVFEKLGPSLYDFLRKNNYRSFPIDL----------------------VREIGRQLLECIAFMHDLRMIHTDLKPENILLVSPEYVKVPDYKSSSRSPSSYFKRVPKSSAIKVIDFGSTTYEREDQNYIVS-TRHYRAPEVILGLGWSYPCDIWSVGCILVELCTGGAL 225          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1823.5271.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDN4_ECTSI2.890e-13659.71Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A5J4XTC6_9CHLO8.340e-1728.89Serine threonine-kinase AFC3-like n=1 Tax=Trebouxi... [more]
A0A5P1F342_ASPOF7.530e-1627.34Protein kinase domain-containing protein n=1 Tax=A... [more]
UPI00098DEE4F1.080e-1527.38serine/threonine-protein kinase AFC2-like isoform ... [more]
A0A388JZC5_CHABU3.800e-1529.89Protein kinase domain-containing protein n=1 Tax=C... [more]
I1MUK1_SOYBN4.690e-1527.17Protein kinase domain-containing protein n=6 Tax=P... [more]
UPI00192225A64.710e-1529.28serine/threonine-protein kinase AFC2-like isoform ... [more]
A0A2P6VF93_9CHLO6.170e-1530.16ATP binding cassette subfamily B4 isoform 2 n=1 Ta... [more]
A0A4Y7KU39_PAPSO6.470e-1528.41Protein kinase domain-containing protein n=3 Tax=P... [more]
K7MLD0_SOYBN6.840e-1527.20Protein kinase domain-containing protein n=2 Tax=P... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1823contigL-elsbetiae_contig1823:18131..20932 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score414.8
Seed ortholog evalue5.2e-113
Seed eggNOG ortholog2880.D8LDN4
KEGG koko:K08287
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.protein serine/threonine/tyrosine kinase activity
EggNOG OGsKOG0667@1,KOG0671@2759
EC2.7.12.1
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Ec32 ortholog descriptionSerine/threonine/dual specificity protein kinase, catalytic domain
Ec32 orthologEc-19_001330.1
Exons3
Model size1400
Cds size1398
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1823.5271.1prot_L-elsbetiae_contig1823.5271.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1823 18131..20932 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815760.7798707-CDS-L-elsbetiae_contig1823:18130..186221622815760.7798707-CDS-L-elsbetiae_contig1823:18130..18622Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1823 18131..18622 -
1691683085.0918512-CDS-L-elsbetiae_contig1823:18130..186221691683085.0918512-CDS-L-elsbetiae_contig1823:18130..18622Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1823 18131..18622 -
1622815760.791659-CDS-L-elsbetiae_contig1823:18944..192921622815760.791659-CDS-L-elsbetiae_contig1823:18944..19292Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1823 18945..19292 -
1691683085.1063144-CDS-L-elsbetiae_contig1823:18944..192921691683085.1063144-CDS-L-elsbetiae_contig1823:18944..19292Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1823 18945..19292 -
1622815760.803376-CDS-L-elsbetiae_contig1823:20374..209321622815760.803376-CDS-L-elsbetiae_contig1823:20374..20932Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1823 20375..20932 -
1691683085.1160483-CDS-L-elsbetiae_contig1823:20374..209321691683085.1160483-CDS-L-elsbetiae_contig1823:20374..20932Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1823 20375..20932 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1823.5271.1

>prot_L-elsbetiae_contig1823.5271.1 ID=prot_L-elsbetiae_contig1823.5271.1|Name=mRNA_L-elsbetiae_contig1823.5271.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=466bp
FGLPCLCVLLFSFCHNMVEPHQGTPMSGISDATNANTAIGVAFGQPERQP
QLEAMDENAVGGSTLKRKSFAMSDSPPAPSPPTQGERCKAVMLAPSPAGA
TAGGGGEQVFRQTNPRNRSEQSREQQQDISIQVSSVNVGETLRVPLSGKT
VPFRVVKRRGRGFSSVVFECEREKEEDGGPSSVTVKVMSGGASGMGACLH
EVETLAFLKLKRQEAGLTHERSRFAELASWFYKRSAVGGVDHVCLVFSGG
GLSLREAMSARSPPKLGVGVAALGSAGRQGASPPLLAWEAREVVEVARGL
LEGIAFLHSVGLIHADIKPENIALYPPSPPSVATTPATTPAKPPAPFDLR
LIDLGNAVFAADALPGVTAGTPSYLSPEARRGLQWGPKVDVWAAGCVLYE
IVSGGRVGTGAAGEIGFGSGPGGPRAATGGALAAVVGLVRRLLAEDADKR
PTAVEALQDALFSQA*
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mRNA from alignment at L-elsbetiae_contig1823:18131..20932-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1823.5271.1 ID=mRNA_L-elsbetiae_contig1823.5271.1|Name=mRNA_L-elsbetiae_contig1823.5271.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2802bp|location=Sequence derived from alignment at L-elsbetiae_contig1823:18131..20932- (Laminarionema elsbetiae ELsaHSoW15)
TTCGGCCTCCCTTGCTTGTGCGTTCTCCTGTTTTCTTTCTGCCATAATAT GGTCGAACCTCACCAGGGAACGCCGATGAGCGGCATCTCTGACGCCACCA ACGCCAACACAGCAATTGGTGTAGCATTTGGACAACCGGAGAGGCAACCC CAACTTGAGGCGATGGACGAGAACGCAGTCGGCGGCTCGACTTTGAAGCG AAAGAGCTTCGCGATGAGCGACTCTCCGCCGGCGCCATCGCCGCCGACAC AGGGAGAAAGATGCAAGGCCGTCATGCTCGCCCCTTCTCCCGCGGGCGCT ACGGCTGGGGGTGGCGGCGAACAAGTTTTCCGGCAAACCAATCCCCGAAA CCGCAGCGAGCAATCCCGCGAGCAGCAACAAGATATCTCGATCCAAGTCT CCTCCGTGAACGTCGGAGAGACCCTGCGCGTTCCGCTCTCCGGCAAAACG GTCCCGTTTCGTGTCGTGAAGAGACGCGGCAGAGGGTTCTCCAGCGTGGT GTTTGAGTGCGAGCGCGAGAAGGAGGAAGACGGCGGGCCTTCTTCGGTCA CGGTCAAGGTGCGGTTTTCAACGGTCGTGAGGGGTATGGAGCATGGAGGA GGCCGAGCCACCGACTTCGCTCAAGAAATGTAAATGTACATGGCATCTAC CGGTGGTGTCCGCGCGCACAAAAATCTATGTGTCTGGGAGGGACTATTAT ACCATCATAGAAACCCGCAGCCCGTCACCCGCTCCTGCGTAAATCCATCT ACACATACATACATACATACACATACAGTAGTCACATGTCGACTAGTCGT GGTCCCGGCATAATGTAGTGCGGTTGATTAGTGCCAAAGCCCGGTTAGTG CCGGTGAAATCGGCTGGCACGGAGTGAGCCCGGTATAGCGCCTGTACCGG CACAATAGAAGCGCACAGCCTCTACGGGCTGGTTTGGGGGTTTAAGGGTC TGTGAATAGTGCCAGAGGCGAAGCAAAAAACAAAGCACACACACACACAC GCGCAGCAGTTCTTTCTATCGAATCTAATATGGTCGTTACATACTTACTA CGGGTGTGTGAACGGGTAAAGTTGTCATTGTTCGACAGCAACAACGATTT TTATACGTTTTTGTTTATTTATAGAGAGCGGGGAGTAGAGAGACGTAGTG TCCAGTTGGTTGGGTTTTGTTTCCGTGTTTTTTCTTGTAGTCTGTTTCGT GGAGATGCTCTGCTCTCTTTCAACGATATATTCGGCGTTGGTGACGAAAT AATGTATTTTATTTTCATGAGTCACGTGCATGGATGGATGGGCGAACGAA ACTTAGTGTGAACGCGTGGGGTTGGTGCATTTGTGCACACACCTTACTCT GCACCAGACACAAAGCTACACGGCGGTGGCAACCAGAGGTACATAAACGG ATGCTTGACGGCTTCATGCTACCAAACCTCCCGATGCGGCACCCCCTTTG TTCCTCATCGCGTCTCTTGGGGTACATACCTATTTACGCCTTTGTTCCCG ATATAATGCCGGTGCCCGCTATAGTGCCGGTGAAAGCGGCTGTCTCATAC CGGCACAATACCGGGACCACGACTGTACAAGAAAACATGACGCATAATAG CGTCGCTTTCAATACAATCTTAATCTTCCACACCGACCAGGTCATGTCCG GAGGAGCGTCCGGCATGGGAGCGTGCCTCCACGAGGTGGAAACCCTCGCA TTTCTCAAGCTCAAGCGGCAAGAGGCAGGCCTGACGCACGAGCGGTCGCG CTTCGCCGAGCTGGCCTCGTGGTTCTACAAGAGGTCAGCCGTTGGGGGCG TGGACCACGTTTGTCTGGTGTTCAGCGGGGGCGGCCTGTCCCTTCGAGAG GCCATGTCGGCGAGATCGCCGCCGAAATTAGGCGTGGGAGTCGCGGCACT CGGCAGCGCCGGCAGGCAGGGGGCCTCCCCCCCTCTGCTTGCGTGGGAGG CTCGGGAGGTGGTGGAGGTTGCGCGCGGCCTGCTTGAGGTGCGTGCGCGT CGATCGAGGTGCATGTAGTGTTTGATTTGTTTTGGGCTGTGAGCCGACCC CATCTTGGATATTTGCGGTGGGCTCGGATTTATAGGTGAGTTTTGTCCCA CTGCTTTTGTTACTTGCCGTTACCCTGGTGCTGGTGGCGGTGATGCTTGC GTTGCTGACATCACTGGTGTCGGCTAAATATGTGTATGCACACAGTATTT TTGCGACCGCCGTTGCTGTTGCCGGCATGCACTATTTACAAGTATGTACA TCATGGAACGCGCTACTGCACCGATCCCCCGCTCCCGTGCCCTGCTGCCC CATTCACCAGGGCATCGCGTTCCTGCATTCTGTCGGGCTCATCCACGCGG ACATCAAGCCGGAAAACATCGCCCTGTACCCCCCGTCTCCGCCCTCAGTG GCGACGACACCAGCGACAACACCGGCAAAGCCACCGGCCCCGTTCGACCT TCGCCTCATCGACCTCGGCAACGCCGTGTTCGCCGCGGACGCCCTTCCCG GGGTGACGGCCGGCACGCCGTCCTACCTGTCGCCCGAGGCCAGGAGGGGG CTGCAGTGGGGACCGAAAGTCGACGTGTGGGCCGCCGGGTGCGTCTTGTA CGAGATCGTGAGCGGAGGGCGGGTGGGGACCGGGGCTGCCGGCGAAATCG GGTTCGGATCTGGCCCGGGAGGGCCGAGGGCGGCCACAGGAGGCGCGCTG GCGGCCGTGGTCGGACTGGTGAGGCGGTTACTGGCGGAAGATGCGGACAA GAGGCCGACCGCCGTCGAGGCTCTGCAAGACGCCCTCTTTTCGCAGGCGT AG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1823:18131..20932-

>mRNA_L-elsbetiae_contig1823.5271.1 ID=mRNA_L-elsbetiae_contig1823.5271.1|Name=mRNA_L-elsbetiae_contig1823.5271.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2796bp|location=Sequence derived from alignment at L-elsbetiae_contig1823:18131..20932- (Laminarionema elsbetiae ELsaHSoW15)
TTCGGCCTCCCTTGCTTGTGCGTTCTCCTGTTTTCTTTCTGCCATAATAT
GGTCGAACCTCACCAGGGAACGCCGATGAGCGGCATCTCTGACGCCACCA
ACGCCAACACAGCAATTGGTGTAGCATTTGGACAACCGGAGAGGCAACCC
CAACTTGAGGCGATGGACGAGAACGCAGTCGGCGGCTCGACTTTGAAGCG
AAAGAGCTTCGCGATGAGCGACTCTCCGCCGGCGCCATCGCCGCCGACAC
AGGGAGAAAGATGCAAGGCCGTCATGCTCGCCCCTTCTCCCGCGGGCGCT
ACGGCTGGGGGTGGCGGCGAACAAGTTTTCCGGCAAACCAATCCCCGAAA
CCGCAGCGAGCAATCCCGCGAGCAGCAACAAGATATCTCGATCCAAGTCT
CCTCCGTGAACGTCGGAGAGACCCTGCGCGTTCCGCTCTCCGGCAAAACG
GTCCCGTTTCGTGTCGTGAAGAGACGCGGCAGAGGGTTCTCCAGCGTGGT
GTTTGAGTGCGAGCGCGAGAAGGAGGAAGACGGCGGGCCTTCTTCGGTCA
CGGTCAAGTTCGGCCTCCCTTGCTTGTGCGTTCTCCTGTTTTCTTTCTGC
CATAATATGGTCGAACCTCACCAGGGAACGCCGATGAGCGGCATCTCTGA
CGCCACCAACGCCAACACAGCAATTGGTGTAGCATTTGGACAACCGGAGA
GGCAACCCCAACTTGAGGCGATGGACGAGAACGCAGTCGGCGGCTCGACT
TTGAAGCGAAAGAGCTTCGCGATGAGCGACTCTCCGCCGGCGCCATCGCC
GCCGACACAGGGAGAAAGATGCAAGGCCGTCATGCTCGCCCCTTCTCCCG
CGGGCGCTACGGCTGGGGGTGGCGGCGAACAAGTTTTCCGGCAAACCAAT
CCCCGAAACCGCAGCGAGCAATCCCGCGAGCAGCAACAAGATATCTCGAT
CCAAGTCTCCTCCGTGAACGTCGGAGAGACCCTGCGCGTTCCGCTCTCCG
GCAAAACGGTCCCGTTTCGTGTCGTGAAGAGACGCGGCAGAGGGTTCTCC
AGCGTGGTGTTTGAGTGCGAGCGCGAGAAGGAGGAAGACGGCGGGCCTTC
TTCGGTCACGGTCAAGGTCATGTCCGGAGGAGCGTCCGGCATGGGAGCGT
GCCTCCACGAGGTGGAAACCCTCGCATTTCTCAAGCTCAAGCGGCAAGAG
GCAGGCCTGACGCACGAGCGGTCGCGCTTCGCCGAGCTGGCCTCGTGGTT
CTACAAGAGGTCAGCCGTTGGGGGCGTGGACCACGTTTGTCTGGTGTTCA
GCGGGGGCGGCCTGTCCCTTCGAGAGGCCATGTCGGCGAGATCGCCGCCG
AAATTAGGCGTGGGAGTCGCGGCACTCGGCAGCGCCGGCAGGCAGGGGGC
CTCCCCCCCTCTGCTTGCGTGGGAGGCTCGGGAGGTGGTGGAGGTTGCGC
GCGGCCTGCTTGAGGTCATGTCCGGAGGAGCGTCCGGCATGGGAGCGTGC
CTCCACGAGGTGGAAACCCTCGCATTTCTCAAGCTCAAGCGGCAAGAGGC
AGGCCTGACGCACGAGCGGTCGCGCTTCGCCGAGCTGGCCTCGTGGTTCT
ACAAGAGGTCAGCCGTTGGGGGCGTGGACCACGTTTGTCTGGTGTTCAGC
GGGGGCGGCCTGTCCCTTCGAGAGGCCATGTCGGCGAGATCGCCGCCGAA
ATTAGGCGTGGGAGTCGCGGCACTCGGCAGCGCCGGCAGGCAGGGGGCCT
CCCCCCCTCTGCTTGCGTGGGAGGCTCGGGAGGTGGTGGAGGTTGCGCGC
GGCCTGCTTGAGGGCATCGCGTTCCTGCATTCTGTCGGGCTCATCCACGC
GGACATCAAGCCGGAAAACATCGCCCTGTACCCCCCGTCTCCGCCCTCAG
TGGCGACGACACCAGCGACAACACCGGCAAAGCCACCGGCCCCGTTCGAC
CTTCGCCTCATCGACCTCGGCAACGCCGTGTTCGCCGCGGACGCCCTTCC
CGGGGTGACGGCCGGCACGCCGTCCTACCTGTCGCCCGAGGCCAGGAGGG
GGCTGCAGTGGGGACCGAAAGTCGACGTGTGGGCCGCCGGGTGCGTCTTG
TACGAGATCGTGAGCGGAGGGCGGGTGGGGACCGGGGCTGCCGGCGAAAT
CGGGTTCGGATCTGGCCCGGGAGGGCCGAGGGCGGCCACAGGAGGCGCGC
TGGCGGCCGTGGTCGGACTGGTGAGGCGGTTACTGGCGGAAGATGCGGAC
AAGAGGCCGACCGCCGTCGAGGCTCTGCAAGACGCCCTCTTTTCGCAGGC
GTAGGGCATCGCGTTCCTGCATTCTGTCGGGCTCATCCACGCGGACATCA
AGCCGGAAAACATCGCCCTGTACCCCCCGTCTCCGCCCTCAGTGGCGACG
ACACCAGCGACAACACCGGCAAAGCCACCGGCCCCGTTCGACCTTCGCCT
CATCGACCTCGGCAACGCCGTGTTCGCCGCGGACGCCCTTCCCGGGGTGA
CGGCCGGCACGCCGTCCTACCTGTCGCCCGAGGCCAGGAGGGGGCTGCAG
TGGGGACCGAAAGTCGACGTGTGGGCCGCCGGGTGCGTCTTGTACGAGAT
CGTGAGCGGAGGGCGGGTGGGGACCGGGGCTGCCGGCGAAATCGGGTTCG
GATCTGGCCCGGGAGGGCCGAGGGCGGCCACAGGAGGCGCGCTGGCGGCC
GTGGTCGGACTGGTGAGGCGGTTACTGGCGGAAGATGCGGACAAGAGGCC
GACCGCCGTCGAGGCTCTGCAAGACGCCCTCTTTTCGCAGGCGTAG
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