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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 2 |
Model size | 647 |
Cds size | 627 |
Stop | 0 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815760.5711432-CDS-L-elsbetiae_contig1823:7520..7877 | 1622815760.5711432-CDS-L-elsbetiae_contig1823:7520..7877 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1823 7521..7877 - |
1691683084.9805973-CDS-L-elsbetiae_contig1823:7520..7877 | 1691683084.9805973-CDS-L-elsbetiae_contig1823:7520..7877 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1823 7521..7877 - |
1622815760.5813289-CDS-L-elsbetiae_contig1823:8749..9019 | 1622815760.5813289-CDS-L-elsbetiae_contig1823:8749..9019 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1823 8750..9019 - |
1691683084.9907606-CDS-L-elsbetiae_contig1823:8749..9019 | 1691683084.9907606-CDS-L-elsbetiae_contig1823:8749..9019 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1823 8750..9019 - |
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815760.5928922-UTR-L-elsbetiae_contig1823:9019..9038 | 1622815760.5928922-UTR-L-elsbetiae_contig1823:9019..9038 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1823 9020..9038 - |
1691683084.9998865-UTR-L-elsbetiae_contig1823:9019..9038 | 1691683084.9998865-UTR-L-elsbetiae_contig1823:9019..9038 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1823 9020..9038 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1823.5270.1 >prot_L-elsbetiae_contig1823.5270.1 ID=prot_L-elsbetiae_contig1823.5270.1|Name=mRNA_L-elsbetiae_contig1823.5270.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=209bp
MATARREESDVEEEFNPFLSPPPPPLNSTLSPPPLPPRSNNSSSGYASNT AATGASSSSSSSPPPSSRRRGSSRTSGNGANRFESETGEQGRAPHGAPRG QSALPTAARAQQPSSRSPTQTSGSSSRRVSPSSRSPVTSTSSPVGGGGGG SAAPLHRRGSSRSNSSSAATATAAAAAAGAQQTSRHSPPTSGTRVVSPPA RNPETTSAT back to topmRNA from alignment at L-elsbetiae_contig1823:7521..9038- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig1823.5270.1 ID=mRNA_L-elsbetiae_contig1823.5270.1|Name=mRNA_L-elsbetiae_contig1823.5270.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1518bp|location=Sequence derived from alignment at L-elsbetiae_contig1823:7521..9038- (Laminarionema elsbetiae ELsaHSoW15) TACTACGACAACCGTACACATGGCGACTGCGAGACGGGAGGAGTCTGATG
TCGAAGAGGAGTTCAACCCCTTTCTTTCCCCCCCTCCTCCCCCCCTCAAC
TCAACACTGTCGCCACCACCCCTGCCTCCTAGAAGCAACAACAGCAGCAG
CGGCTACGCCAGCAACACAGCAGCAACTGGTGCTTCTTCTTCTTCTTCTT
CATCGCCACCGCCATCCTCTCGGAGAAGAGGATCTTCGCGGACGAGTGGC
AATGGCGCAAACCGCTTTGAGAGCGAGACCGGAGAGCAGGTTGGCCATGT
GTACACAGCAATAGTCCACTTCAAGTTAAACTCTTGCTATGACTTTGTAT
TTTAAGGGGTGACCTTGCTCGTACCCACACTCTCAAACTCTCTATCTAGG
CTTGTAGGGTGGGTTGGACTGGACCCTGCTGCTGGGGAGCCCTAGGGAAG
GTTGAGCGAGATAACAGACGGAAAAGATCGGACAGGGAAAAAACGGGGGG
GGAGTTGATTCTTGCTTAGCTCTGTGGAAGTTTGGGGATTCGTCGGATCG
GATGGAAAAGAGGAAAGGCATGCGATGGAATTGAAATCCCTCTCCTTTGT
ACGTATAAAGCCTGCATCGTCCTTACCCTAGGTTTCGAGCAACACCGTCG
GGCCGTTGTTCGACCCCCGCGTACCGTAATCAGACACATACGGGAGGTTC
TCCCACGTGCCGTAAACAGACACGTACGGGAGGTTCTGTGACGTGTGATG
TGGCCACACCACGAGGCACTCACCAAGAGCATTCATTGCGGGGAGATATG
GACATATCATACGTACGTACGACGTATCCATGTACTTACATAGTCTAGCT
TCTAGAGCACTAACGTACATGCAGCATAGCCTTGGACCCTTGCCTGCTTT
TGAAGGATAGCCGGCCTGTTTTTGAAAAGGAGTTCCACCACCGTCCGTGG
CGTAACACTCGTGATGACCATATTTAGATAGACTACTACCCCCTGTGTCA
TGTACCGTGCCCCCTGGTGCCAGTAGTTGACAGGCCTAGACAGAAAGGAT
GAGTGAACATACATATACAGATAGTAAAGTGAACACCATCTTAACTCTGC
GTTGGAACGCGTTGTTGTTAAAATTACGGTGATGAACGCGGTTTTGTGCG
GTGTGCCGCAGGGACGAGCCCCTCACGGAGCCCCTCGCGGCCAGTCAGCT
CTACCGACGGCAGCGAGGGCTCAGCAACCCTCGAGTCGTTCTCCCACGCA
GACGTCAGGGTCCTCATCCAGGCGAGTATCCCCCTCCTCGCGGAGCCCCG
TGACTTCCACGTCATCTCCGGTAGGAGGAGGAGGAGGAGGATCAGCAGCA
CCGTTGCATCGTCGGGGTAGCAGTCGCAGCAATAGCAGCTCGGCGGCGAC
AGCGACGGCGGCAGCAGCGGCAGCGGGGGCTCAGCAAACATCAAGACATT
CACCACCGACGTCAGGGACGCGAGTGGTATCCCCCCCTGCACGGAACCCC
GAGACAACCTCAGCAACG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig1823:7521..9038- >mRNA_L-elsbetiae_contig1823.5270.1 ID=mRNA_L-elsbetiae_contig1823.5270.1|Name=mRNA_L-elsbetiae_contig1823.5270.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1254bp|location=Sequence derived from alignment at L-elsbetiae_contig1823:7521..9038- (Laminarionema elsbetiae ELsaHSoW15) ATGGCGACTGCGAGACGGGAGGAGTCTGATGTCGAAGAGGAGTTCAACCC CTTTCTTTCCCCCCCTCCTCCCCCCCTCAACTCAACACTGTCGCCACCAC CCCTGCCTCCTAGAAGCAACAACAGCAGCAGCGGCTACGCCAGCAACACA GCAGCAACTGGTGCTTCTTCTTCTTCTTCTTCATCGCCACCGCCATCCTC TCGGAGAAGAGGATCTTCGCGGACGAGTGGCAATGGCGCAAACCGCTTTG AGAGCGAGACCGGAGAGCAGATGGCGACTGCGAGACGGGAGGAGTCTGAT GTCGAAGAGGAGTTCAACCCCTTTCTTTCCCCCCCTCCTCCCCCCCTCAA CTCAACACTGTCGCCACCACCCCTGCCTCCTAGAAGCAACAACAGCAGCA GCGGCTACGCCAGCAACACAGCAGCAACTGGTGCTTCTTCTTCTTCTTCT TCATCGCCACCGCCATCCTCTCGGAGAAGAGGATCTTCGCGGACGAGTGG CAATGGCGCAAACCGCTTTGAGAGCGAGACCGGAGAGCAGGGACGAGCCC CTCACGGAGCCCCTCGCGGCCAGTCAGCTCTACCGACGGCAGCGAGGGCT CAGCAACCCTCGAGTCGTTCTCCCACGCAGACGTCAGGGTCCTCATCCAG GCGAGTATCCCCCTCCTCGCGGAGCCCCGTGACTTCCACGTCATCTCCGG TAGGAGGAGGAGGAGGAGGATCAGCAGCACCGTTGCATCGTCGGGGTAGC AGTCGCAGCAATAGCAGCTCGGCGGCGACAGCGACGGCGGCAGCAGCGGC AGCGGGGGCTCAGCAAACATCAAGACATTCACCACCGACGTCAGGGACGC GAGTGGTATCCCCCCCTGCACGGAACCCCGAGACAACCTCAGCAACGGGA CGAGCCCCTCACGGAGCCCCTCGCGGCCAGTCAGCTCTACCGACGGCAGC GAGGGCTCAGCAACCCTCGAGTCGTTCTCCCACGCAGACGTCAGGGTCCT CATCCAGGCGAGTATCCCCCTCCTCGCGGAGCCCCGTGACTTCCACGTCA TCTCCGGTAGGAGGAGGAGGAGGAGGATCAGCAGCACCGTTGCATCGTCG GGGTAGCAGTCGCAGCAATAGCAGCTCGGCGGCGACAGCGACGGCGGCAG CAGCGGCAGCGGGGGCTCAGCAAACATCAAGACATTCACCACCGACGTCA GGGACGCGAGTGGTATCCCCCCCTGCACGGAACCCCGAGACAACCTCAGC AACG back to top
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