mRNA_L-elsbetiae_contig1821.5259.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1821.5259.1 vs. uniprot
Match: D7G7F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F9_ECTSI) HSP 1 Score: 156 bits (394), Expect = 2.790e-42 Identity = 86/150 (57.33%), Postives = 99/150 (66.00%), Query Frame = 1 Query: 4 TRSLDAFTVALNQACEGGKKRWYTSTRELQLASLELCRACRSVPTLHVRVKKETPRSLWSPRRSEPQLRSETSWKKAPSPSRVAVVRAYRLTWGLEMEALLQSASNELWKWLHCLEVRGYVSSASLESVVWPQGLRRLDLGNSFDQPITR 453 TRS DAF +AL+QACEGG+KRWYTST ELQL SL++CRACRS PTLHVRV TP SLWSP Q T K SRV VVRA RLTW ME L+Q A+ ELW LE+ G + +ASL SVVWP GL +L L F P+ + Sbjct: 7 TRSFDAFAIALSQACEGGEKRWYTSTTELQLGSLDICRACRSTPTLHVRVTGGTPTSLWSP--PTVQALPNTQSSKVRVVSRVPVVRALRLTWAFSMETLVQRAAIELWSRSERLEMVGPLCAASLGSVVWPLGLTQLVLDTDFHIPMEK 154
BLAST of mRNA_L-elsbetiae_contig1821.5259.1 vs. uniprot
Match: A0A6H5LIJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE) HSP 1 Score: 149 bits (375), Expect = 1.580e-35 Identity = 87/148 (58.78%), Postives = 101/148 (68.24%), Query Frame = 1 Query: 1 QTRSLDAFTVALNQACEGGKKRWYTSTRELQLASLELCRACRSVPTLHVRVKKETPRSLWSPRRSEPQLRSET-SWKKAPSPSRVAVVRAYRLTWGLEMEALLQSASNELWKWLHCLEVRGYVSSASLES-VVWPQGLRRLDLGNSFD 438 +TR LDAF +AL+QACEGG+KRWY ST ELQL SL+LCRACR+ LHV V +TPRSLWS R + Q R T SW S SRV VVRA RLTW L MEALL+ A+ ELW W LE+ G +SL S VVWP+GL +L L D Sbjct: 8 RTRCLDAFVIALSQACEGGEKRWYASTLELQLTSLDLCRACRTTSILHVHVDDQTPRSLWSSRTA--QTRPNTRSWNLHIS-SRVPVVRALRLTWALSMEALLRKAAIELWTWSERLELLGSSCVSSLGSEVVWPRGLTQLVLYTDSD 152
BLAST of mRNA_L-elsbetiae_contig1821.5259.1 vs. uniprot
Match: A0A6H5L1V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE) HSP 1 Score: 132 bits (333), Expect = 1.120e-30 Identity = 74/139 (53.24%), Postives = 92/139 (66.19%), Query Frame = 1 Query: 1 QTRSLDAFTVALNQACEGGKKRWYTSTRELQLASLELCRACRSVPTLHVRVKKETPRSLWSPRRSEPQLRSETSWKKAPSPSRVAVVRAYRLTWGLEMEALLQSASNELWKWLHCLEVRGYVSSASLESVVWPQGLRRL 417 Q R LDAF VAL+Q EGG+KRWYTST +LQLASLE C ACRS P LHV V ETP +LWS ++ P + T RV V+A LTW E+ L SAS+ELW L L+++ + +A+L+SVVWPQGL+RL Sbjct: 6 QRRCLDAFVVALSQCYEGGEKRWYTSTLQLQLASLEFCGACRSTPMLHVYVDAETPPTLWSLGQANPTAGTST---------RVPAVQAVGLTWARPTESPLGSASSELWTRLESLQLQVSLCTANLDSVVWPQGLQRL 135
BLAST of mRNA_L-elsbetiae_contig1821.5259.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE) HSP 1 Score: 131 bits (330), Expect = 2.660e-29 Identity = 72/138 (52.17%), Postives = 89/138 (64.49%), Query Frame = 1 Query: 4 TRSLDAFTVALNQACEGGKKRWYTSTRELQLASLELCRACRSVPTLHVRVKKETPRSLWSPRRSEPQLRSETSWKKAPSPSRVAVVRAYRLTWGLEMEALLQSASNELWKWLHCLEVRGYVSSASLESVVWPQGLRRL 417 ++ LDAF VALNQAC+G +KRWY ST ELQL SLE+C ACR V TLHVRVK +TP SLW P S+ + K SRV VV+A+ LTW L M L Q ++ E+ C + S+ASLES VWPQ L+R+ Sbjct: 7 SKCLDAFVVALNQACDGQEKRWYVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLWFP--SQNHTTTNNRSPKVCISSRVPVVQAFGLTWALPMGVLQQRSATEVRSGSGCRRANTHSSAASLESAVWPQRLKRM 142
BLAST of mRNA_L-elsbetiae_contig1821.5259.1 vs. uniprot
Match: A0A6H5KXX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX4_9PHAE) HSP 1 Score: 125 bits (315), Expect = 9.100e-28 Identity = 76/175 (43.43%), Postives = 94/175 (53.71%), Query Frame = 1 Query: 4 TRSLDAFTVALNQACEGGKKRWYTSTRELQLASLELCRACRSVPTLHVRVKKETPRSLWSPRRSEPQLRSETS--------------------------WKKAPSPSRVAVVRAYRLTWGLEMEALLQSASNELWKWLHCLEVRGYVSSASLESVVWPQGLRRLDLGNSFDQPIT 450 +R DA +A++QA EG KRWYTST EL+LASLE CRACR VPT+HVRV TP SLWSP + + +S KA SRV V +A LTW L E LLQ + ELW L L++R +S + L SV WPQ L+RL L F+ I+ Sbjct: 7 SRGFDALIIAISQAYEGRGKRWYTSTLELRLASLETCRACRRVPTIHVRVDANTPPSLWSPHAMPTRAHTRSSKTRAXXXXXXXXXXXXXXXXXXXXXXXXKARISSRVPVGQALGLTWALPTEILLQGVAVELWTKLEFLQLRESLSPSDLVSVAWPQNLKRLALETGFEAAIS 181
BLAST of mRNA_L-elsbetiae_contig1821.5259.1 vs. uniprot
Match: A0A6H5KLV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV1_9PHAE) HSP 1 Score: 122 bits (306), Expect = 3.030e-27 Identity = 69/134 (51.49%), Postives = 87/134 (64.93%), Query Frame = 1 Query: 1 QTRSLDAFTVALNQACEGGKKRWYTSTRELQLASLELCRACRSVPTLHVRVKKETPRSLWSPRRSEPQLRSETSWKKAPSPSRVAVVRAYRLTWGLEMEALLQSASNELWKWLHCLEVRGYVSSASLESVVWPQ 402 ++ L AF VALNQ C G +KRWY ST ELQL SLE C ACR VPTLHVRV ++TPRSLWSP +S + + ++A +RV V+A LTW L+ME LLQ+++ EL V G S+ASL S+ W Q Sbjct: 14 RSECLRAFIVALNQTCNGQEKRWYASTLELQLVSLEFCGACRRVPTLHVRVDRQTPRSLWSPCKSHATTKKRS--REACVSNRVPAVQASGLTWALDMEVLLQTSAVELRSRSKYRRVSGNSSTASLGSMFWLQ 145
BLAST of mRNA_L-elsbetiae_contig1821.5259.1 vs. uniprot
Match: D7FTK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK8_ECTSI) HSP 1 Score: 112 bits (280), Expect = 6.610e-25 Identity = 68/138 (49.28%), Postives = 86/138 (62.32%), Query Frame = 1 Query: 10 SLDAFTVALNQACEGGKKRWYTSTRELQLASLELCRACRSVPTLHVRVKKETPRSLWSPR--RSEPQLRSETSWKKAPSPSRVAVVRAYRLTWGLEMEALLQSASNELWKWLHCLEVRGYVSSASLESVVWPQGLRRL 417 SLD VALNQAC+G +KRWY ST ELQL SLELC ACRS LHV V+++TP +LWS R R+ P RS + + +RV V+A TW L M+ L Q A+ E G+ +AS+ESVVWP+ L+RL Sbjct: 89 SLDTLIVALNQACDGQEKRWYVSTLELQLVSLELCGACRSAQLLHVFVREDTPPTLWSSRTSRTTPSQRSP----EVCTSNRVPAVQALCWTWALPMDRLPQRAAAEPQPVTERRLQDGHSFAASVESVVWPESLKRL 222
BLAST of mRNA_L-elsbetiae_contig1821.5259.1 vs. uniprot
Match: A0A6H5K8K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K9_9PHAE) HSP 1 Score: 112 bits (280), Expect = 4.880e-23 Identity = 69/169 (40.83%), Postives = 91/169 (53.85%), Query Frame = 1 Query: 1 QTRSLDAFTVALNQACEGGKKRWYTSTRELQLASLELCRACRSVPTLHVRVKKETPRSLWSPRRSEPQLRSETSWKKAPSPSRVAVVRAYRLTWGLEMEALLQSASNELWK--------------------WLHCLEVRGYVSSASLESVVWPQGLRRLDLGNSFDQPI 447 ++ LDAF VAL QA +G KRWY ST ELQL SLE C ACRS + V++ ++TP SLWSPR+S L+ + ++A PSRV V+A W L ME LL ++ EL + W L + S S+ SV WP L+ L G+ F+QPI Sbjct: 26 RSECLDAFIVALKQAGDGRAKRWYVSTLELQLVSLEFCGACRSALSFDVQIHRQTPHSLWSPRKSHGTLKKRS--REACIPSRVPAVQANGWMWALPMEILLPRSATELHQVSENRQPTGPSSATSPGRMGWFQKLTRLMFYSERSVNSVSWPACLQELSFGDFFNQPI 192
BLAST of mRNA_L-elsbetiae_contig1821.5259.1 vs. uniprot
Match: A0A6H5L3M5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3M5_9PHAE) HSP 1 Score: 108 bits (269), Expect = 1.060e-21 Identity = 64/141 (45.39%), Postives = 79/141 (56.03%), Query Frame = 1 Query: 1 QTRSLDAFTVALN-QACEGGKKRWYTSTRELQLASLELCRACRSVPTLHVRVKKETPRSLWSPRRSEPQLRSETSWKKAPSPSRVAVVRAYRLTWGLEMEALLQSASNELWKWLHCLEVRGYVSSASLESVVWPQGLRRLD 420 Q LDAF LN Q+C GKKRWYTS RELQL SL+ C CRS L VRV+ P SLWSP +S + +W + P+ VRAY TW + ++ LL+ W L RG A L SVVWPQGL++L+ Sbjct: 100 QNLCLDAFVAVLNHQSCVEGKKRWYTSIRELQLVSLKFCGVCRSTSILRVRVEHNAPPSLWSPTKSFSYALPD-AWNRVPA------VRAYGWTWSIPVDTLLKVCDLRYWAKAE-LSRRGSFPEAKLASVVWPQGLKQLE 232
BLAST of mRNA_L-elsbetiae_contig1821.5259.1 vs. uniprot
Match: A0A6H5JL88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL88_9PHAE) HSP 1 Score: 104 bits (260), Expect = 5.600e-21 Identity = 64/125 (51.20%), Postives = 77/125 (61.60%), Query Frame = 1 Query: 64 RWYTSTRELQLASLELCRACRSVPTLHVRVKKETPRSLWSPRRSEPQLRSETS------WKKAPSPSRVAVVRAYRLTWGLEMEALLQSASNELWKWLHCLEVRGYVSSASLESVVWPQGLRRLD 420 RW+TST +QLASLE CRA RS+PT+ + V PRSLW R+S Q S T WK P SRV ++RA RL WGL ME LLQS + ELW L L + G VS AS S+V PQ L +L+ Sbjct: 4 RWFTSTLNIQLASLEFCRASRSIPTIALHVDSRIPRSLWDGRKS--QTPSSTRGLEIRCWKARPL-SRVPLIRASRLNWGLSMETLLQSTAVELWTGLKSLHLCGDVSDASPASMVQPQRLEQLE 125 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1821.5259.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1821.5259.1 >prot_L-elsbetiae_contig1821.5259.1 ID=prot_L-elsbetiae_contig1821.5259.1|Name=mRNA_L-elsbetiae_contig1821.5259.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=230bp MSSTSPSPGSCGRLRCNNFRSGICSTNPLPDSRGRLFSSGYLSAMSSTNPback to top mRNA from alignment at L-elsbetiae_contig1821:4305..5648+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1821.5259.1 ID=mRNA_L-elsbetiae_contig1821.5259.1|Name=mRNA_L-elsbetiae_contig1821.5259.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1344bp|location=Sequence derived from alignment at L-elsbetiae_contig1821:4305..5648+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1821:4305..5648+ >mRNA_L-elsbetiae_contig1821.5259.1 ID=mRNA_L-elsbetiae_contig1821.5259.1|Name=mRNA_L-elsbetiae_contig1821.5259.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1380bp|location=Sequence derived from alignment at L-elsbetiae_contig1821:4305..5648+ (Laminarionema elsbetiae ELsaHSoW15)back to top |