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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | mitochondrion |
Exons | 2 |
Model size | 829 |
Cds size | 441 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815754.1393123-UTR-L-elsbetiae_contig1809:7474..7587 | 1622815754.1393123-UTR-L-elsbetiae_contig1809:7474..7587 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1809 7475..7587 + |
1691683081.0064027-UTR-L-elsbetiae_contig1809:7474..7587 | 1691683081.0064027-UTR-L-elsbetiae_contig1809:7474..7587 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1809 7475..7587 + |
1622815754.178381-UTR-L-elsbetiae_contig1809:8601..8876 | 1622815754.178381-UTR-L-elsbetiae_contig1809:8601..8876 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1809 8602..8876 + |
1691683081.0448315-UTR-L-elsbetiae_contig1809:8601..8876 | 1691683081.0448315-UTR-L-elsbetiae_contig1809:8601..8876 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1809 8602..8876 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815754.1501935-CDS-L-elsbetiae_contig1809:7587..7871 | 1622815754.1501935-CDS-L-elsbetiae_contig1809:7587..7871 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1809 7588..7871 + |
1691683081.021131-CDS-L-elsbetiae_contig1809:7587..7871 | 1691683081.021131-CDS-L-elsbetiae_contig1809:7587..7871 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1809 7588..7871 + |
1622815754.1614747-CDS-L-elsbetiae_contig1809:8444..8601 | 1622815754.1614747-CDS-L-elsbetiae_contig1809:8444..8601 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1809 8445..8601 + |
1691683081.0315566-CDS-L-elsbetiae_contig1809:8444..8601 | 1691683081.0315566-CDS-L-elsbetiae_contig1809:8444..8601 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1809 8445..8601 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1809.5201.1 >prot_L-elsbetiae_contig1809.5201.1 ID=prot_L-elsbetiae_contig1809.5201.1|Name=mRNA_L-elsbetiae_contig1809.5201.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=147bp
MVRRAVLAPVGGGPARFICLGRQRFPPAEAWRPRSELLALRKYAQFERRE SALTVTGALDSDRSDEDESRALSEPDAVVKTEGMEVPHGTYGSCRRSRGR EEKEEEKGRGGAGARFPKSQKQESLCTTSTIGRKTAFVNAKLYRLD* back to topmRNA from alignment at L-elsbetiae_contig1809:7475..8876+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig1809.5201.1 ID=mRNA_L-elsbetiae_contig1809.5201.1|Name=mRNA_L-elsbetiae_contig1809.5201.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1402bp|location=Sequence derived from alignment at L-elsbetiae_contig1809:7475..8876+ (Laminarionema elsbetiae ELsaHSoW15) GCAGCACGCAGAGCAAGGCATGTTGCTTCTCTTCTTTTCTGAGCGGCGTC
GATCTAGCGGCGACGGCAATAAGAGTGACAGGCCTGAGAGTGTTGGCCGG
GGAGCAAGAGGGGATGGTACGGCGCGCCGTGCTAGCTCCGGTGGGAGGAG
GACCAGCCCGTTTCATTTGCCTGGGTCGGCAGAGATTCCCTCCAGCAGAA
GCATGGAGACCAAGAAGCGAGCTGCTGGCTTTGAGGAAATACGCCCAGTT
CGAGCGAAGAGAGAGCGCGTTGACAGTGACAGGCGCGTTGGACAGTGACA
GGAGTGACGAAGACGAATCGAGGGCGCTGTCCGAGCCAGATGCTGTGGTG
AAGACAGAGGGCATGGAGGTGCCCCATGGAACCTACGGGAGCTGCAGGTG
CGTCTCAAGTCTTACACTCCTCGGCATCGTTTATTTCCCGTGGTGGGCAC
TTACTTGAAGTGGGTAGAGAGGCGATTGAACGGGTGGAAATAGGAGCCAT
AATAGCTAATCGGTGAACAAGGTGCGGCAGTGCGGGCTCGGTTTCGTACA
TACCTCTATATCGAACTGTTGCTGTTTGTTCAAGGCACATCGAGTATAAG
GTACCATGTGGTACCATGTACACGGCAGGACTGATTGTTTGTTGCCAGAT
GGCGGTCACTGTAGTGCACCAGTGCATTTTGTCAGGAAGACCCTCGTTCG
TCCACGTGCGCACCAAAGCTTGTCGCGTCTGGTGTTCATTTTCGGCATGC
TCTATTCTCTGCTGCTAGAGTGGAATCCGCTCAACCTAGTCCTGCTCGGA
AACAACACGACTACTTGGTACACGCGCCATCGGTTTCCCAGAGGGGTTTC
AGGCCCTTAGTGTCCCTGAAGTTTTCGTTCGCCAGTAGCGCTTACAGAGG
CCGCTTCCGCATGCTCGCCTATTTCCCGGATGTCCTTCCTCTTCATCGCG
CTCCCATTCGATCATCCCAGGCGGAGCCGAGGTAGAGAAGAGAAAGAAGA
GGAGAAAGGCCGCGGGGGGGCAGGGGCAAGGTTCCCGAAATCACAGAAGC
AGGAGTCGCTATGCACAACCAGCACAATTGGGAGGAAGACTGCATTCGTT
AACGCAAAACTTTATAGATTAGATTAGATCGCAGGAGTAAAGCGGGGAAA
TAGCAGCAGCAGCAGCAGCAGCAGCCTGGTGTAGGTCTGGCGGGTCGTGG
TGAGATGGGTGCAGACGGCTGGCTGCAAGAGCGAGACAGTTGCTGTCGCA
GCGCACGATGCTTGATGATTCTGTTGCTGCGTGCGTGTTGTTTTTGTCAA
TGAAGTGGGTTGTCTTTGACGGCAAGTTGACAGCGGTTGTTTCGTGGTGC
CACCGTCGTTTGTTTGTGGCAGGTTTACTTTCGTGTCTTTGCTCTCGTCG
GG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig1809:7475..8876+ >mRNA_L-elsbetiae_contig1809.5201.1 ID=mRNA_L-elsbetiae_contig1809.5201.1|Name=mRNA_L-elsbetiae_contig1809.5201.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=882bp|location=Sequence derived from alignment at L-elsbetiae_contig1809:7475..8876+ (Laminarionema elsbetiae ELsaHSoW15) ATGGTACGGCGCGCCGTGCTAGCTCCGGTGGGAGGAGGACCAGCCCGTTT CATTTGCCTGGGTCGGCAGAGATTCCCTCCAGCAGAAGCATGGAGACCAA GAAGCGAGCTGCTGGCTTTGAGGAAATACGCCCAGTTCGAGCGAAGAGAG AGCGCGTTGACAGTGACAGGCGCGTTGGACAGTGACAGGAGTGACGAAGA CGAATCGAGGGCGCTGTCCGAGCCAGATGCTGTGGTGAAGACAGAGGGCA TGGAGGTGCCCCATGGAACCTACGGGAGCTGCAGATGGTACGGCGCGCCG TGCTAGCTCCGGTGGGAGGAGGACCAGCCCGTTTCATTTGCCTGGGTCGG CAGAGATTCCCTCCAGCAGAAGCATGGAGACCAAGAAGCGAGCTGCTGGC TTTGAGGAAATACGCCCAGTTCGAGCGAAGAGAGAGCGCGTTGACAGTGA CAGGCGCGTTGGACAGTGACAGGAGTGACGAAGACGAATCGAGGGCGCTG TCCGAGCCAGATGCTGTGGTGAAGACAGAGGGCATGGAGGTGCCCCATGG AACCTACGGGAGCTGCAGGCGGAGCCGAGGTAGAGAAGAGAAAGAAGAGG AGAAAGGCCGCGGGGGGGCAGGGGCAAGGTTCCCGAAATCACAGAAGCAG GAGTCGCTATGCACAACCAGCACAATTGGGAGGAAGACTGCATTCGTTAA CGCAAAACTTTATAGATTAGATTAGGCGGAGCCGAGGTAGAGAAGAGAAA GAAGAGGAGAAAGGCCGCGGGGGGGCAGGGGCAAGGTTCCCGAAATCACA GAAGCAGGAGTCGCTATGCACAACCAGCACAATTGGGAGGAAGACTGCAT TCGTTAACGCAAAACTTTATAGATTAGATTAG back to top
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