mRNA_L-elsbetiae_contig1808.5195.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1808.5195.1 vs. uniprot
Match: A0A6H5KSM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSM3_9PHAE) HSP 1 Score: 354 bits (909), Expect = 5.680e-111 Identity = 172/178 (96.63%), Postives = 175/178 (98.31%), Query Frame = 3 Query: 3 LFDPPGSCTVHAVQGRTVEGTLIIHQARHRHADVHWLYTAVSRATGPSNVRVIDDIHRSESDMSDRERVSWVSRKVSSYIYADVAAGRLGPEEGRSHREALVQELLNSYGGRCNLCTCELVWAVYSERQPTLDRLDCSLPHTAENVDVKCLRCNRALGSLGRGRTKKKKVDRSGKDER 536 LFDPPGSCTVHAVQGRTVEGTLIIHQARHRHADVHWLYTAVSRATGPS+VRVIDDIHRSESDMSDRERVSWVSRKVSSYIYADVAAGRLGPEEGR HREALVQELLNSYGGRC+ CTCELVWAVYSE+QPTLDRLDCSLPHTAENVDVKCLRCNRA GSLGRGRTKKKKVDRSGKDER Sbjct: 1249 LFDPPGSCTVHAVQGRTVEGTLIIHQARHRHADVHWLYTAVSRATGPSSVRVIDDIHRSESDMSDRERVSWVSRKVSSYIYADVAAGRLGPEEGRRHREALVQELLNSYGGRCHRCTCELVWAVYSEQQPTLDRLDCSLPHTAENVDVKCLRCNRARGSLGRGRTKKKKVDRSGKDER 1426
BLAST of mRNA_L-elsbetiae_contig1808.5195.1 vs. uniprot
Match: A0A6H5JTY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTY9_9PHAE) HSP 1 Score: 327 bits (838), Expect = 1.030e-101 Identity = 157/178 (88.20%), Postives = 164/178 (92.13%), Query Frame = 3 Query: 3 LFDPPGSCTVHAVQGRTVEGTLIIHQARHRHADVHWLYTAVSRATGPSNVRVIDDIHRSESDMSDRERVSWVSRKVSSYIYADVAAGRLGPEEGRSHREALVQELLNSYGGRCNLCTCELVWAVYSERQPTLDRLDCSLPHTAENVDVKCLRCNRALGSLGRGRTKKKKVDRSGKDER 536 LFDPPGSCTVHAVQGR VEGTLIIHQARH HA+VHWLYTAVSRATGPSNVRVIDDIHRSESDM R R SWVSRKVSSY+YADV AGRLGPEEG HREALVQELLNSYGGRCNLCTCE++WA++SER P LDRLDCSLP+TAENVDVKCLRCNRA GSL RGRTKKKKVD SGKDER Sbjct: 1059 LFDPPGSCTVHAVQGRKVEGTLIIHQARHPHAEVHWLYTAVSRATGPSNVRVIDDIHRSESDMPGRVRTSWVSRKVSSYVYADVTAGRLGPEEGGRHREALVQELLNSYGGRCNLCTCEIIWAIFSERHPMLDRLDCSLPNTAENVDVKCLRCNRARGSLSRGRTKKKKVDGSGKDER 1236
BLAST of mRNA_L-elsbetiae_contig1808.5195.1 vs. uniprot
Match: A0A6H5L0U3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0U3_9PHAE) HSP 1 Score: 294 bits (752), Expect = 7.930e-97 Identity = 139/170 (81.76%), Postives = 155/170 (91.18%), Query Frame = 3 Query: 3 LFDPPGSCTVHAVQGRTVEGTLIIHQARHRHADVHWLYTAVSRATGPSNVRVIDDIHRSESDMSDRERVSWVSRKVSSYIYADVAAGRLGPEEGRSHREALVQELLNSYGGRCNLCTCELVWAVYSERQPTLDRLDCSLPHTAENVDVKCLRCNRALGSLGRGRTKKKKV 512 LFDP G+CTVHAVQGRTV+G L+IHQARH +ADV+W+YTA+SRATGPSNVRVIDDIHRS+SDMSDRER SWVSRKVSSYIYADVAA RLG +EG HREALVQEL SYGGRCNLC +LVWAVYSERQPTLDRLDC+LPHT +NVDVKCL+CNRA GSLGRG++KK+K Sbjct: 204 LFDPSGACTVHAVQGRTVQGRLLIHQARHPYADVYWIYTAISRATGPSNVRVIDDIHRSKSDMSDRERASWVSRKVSSYIYADVAAERLGSDEGGQHREALVQELHRSYGGRCNLCNHDLVWAVYSERQPTLDRLDCALPHTIDNVDVKCLKCNRARGSLGRGKSKKRKT 373
BLAST of mRNA_L-elsbetiae_contig1808.5195.1 vs. uniprot
Match: A0A6H5JCS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCS9_9PHAE) HSP 1 Score: 313 bits (803), Expect = 9.960e-96 Identity = 148/169 (87.57%), Postives = 158/169 (93.49%), Query Frame = 3 Query: 3 LFDPPGSCTVHAVQGRTVEGTLIIHQARHRHADVHWLYTAVSRATGPSNVRVIDDIHRSESDMSDRERVSWVSRKVSSYIYADVAAGRLGPEEGRSHREALVQELLNSYGGRCNLCTCELVWAVYSERQPTLDRLDCSLPHTAENVDVKCLRCNRALGSLGRGRTKKKK 509 LFDPPG+CTVHAVQGRTVEG LIIHQARH HADVHWLYTAVSRATGPSNV VI+DIHRSES+MSD ER+SWV RK+SSYIYADV AGRLGP+EG HREAL +ELLNSYGGRC+LC+CELVWAVYSERQPTLDRLDCSLPHT +NVDVKCLRCNRA GSLGRGRTKKKK Sbjct: 1284 LFDPPGACTVHAVQGRTVEGRLIIHQARHFHADVHWLYTAVSRATGPSNVMVIEDIHRSESNMSDLERISWVYRKISSYIYADVTAGRLGPDEGMQHREALAEELLNSYGGRCSLCSCELVWAVYSERQPTLDRLDCSLPHTVDNVDVKCLRCNRARGSLGRGRTKKKK 1452
BLAST of mRNA_L-elsbetiae_contig1808.5195.1 vs. uniprot
Match: A0A6H5KCL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCL4_9PHAE) HSP 1 Score: 295 bits (755), Expect = 1.880e-92 Identity = 143/178 (80.34%), Postives = 157/178 (88.20%), Query Frame = 3 Query: 3 LFDPPGSCTVHAVQGRTVEGTLIIHQARHRHADVHWLYTAVSRATGPSNVRVIDDIHRSESDMSDRERVSWVSRKVSSYIYADVAAGRLGPEEGRSHREALVQELLNSYGGRCNLCTCELVWAVYSERQPTLDRLDCSLPHTAENVDVKCLRCNRALGSLGRGRTKKKKVDRSGKDER 536 LF P G CTVHAVQGRTVEG LIIHQARH HA+VHWLYTAVSRATGPSNVRVIDD+HR+ES+MS RER SWVSRKVSSYIY +V AGRL ++G HREALVQEL SYGGRCNLC E +WAVYSERQPTLDRLDCSLPHTAENVDV+CL+CNRA SLGRG++K+KKVD SGK+ER Sbjct: 633 LFHPRGVCTVHAVQGRTVEGRLIIHQARHFHAEVHWLYTAVSRATGPSNVRVIDDVHRNESNMSHRERASWVSRKVSSYIYTNVTAGRLRADDGGQHREALVQELHRSYGGRCNLCNHEPIWAVYSERQPTLDRLDCSLPHTAENVDVQCLKCNRARRSLGRGKSKRKKVDSSGKEER 810
BLAST of mRNA_L-elsbetiae_contig1808.5195.1 vs. uniprot
Match: A0A6H5KWL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWL4_9PHAE) HSP 1 Score: 294 bits (753), Expect = 4.400e-92 Identity = 140/170 (82.35%), Postives = 154/170 (90.59%), Query Frame = 3 Query: 3 LFDPPGSCTVHAVQGRTVEGTLIIHQARHRHADVHWLYTAVSRATGPSNVRVIDDIHRSESDMSDRERVSWVSRKVSSYIYADVAAGRLGPEEGRSHREALVQELLNSYGGRCNLCTCELVWAVYSERQPTLDRLDCSLPHTAENVDVKCLRCNRALGSLGRGRTKKKKV 512 +FDPPGSCTVHAVQGRTVEG LIIHQARH +ADV+W+YTA+SRATGPSNVRVIDDI+RS+SDMSDRER SWVSRKVSSYIYADVAA RLG +EG HREALVQEL SYGGRCNLC EL+W VYSERQPTLDRLDC+LPHT NVDVKCL+CNRA GSLGRG++KK+K Sbjct: 649 VFDPPGSCTVHAVQGRTVEGRLIIHQARHPYADVYWIYTAISRATGPSNVRVIDDIYRSKSDMSDRERASWVSRKVSSYIYADVAAERLGSDEGGQHREALVQELHRSYGGRCNLCNHELIWTVYSERQPTLDRLDCALPHTIGNVDVKCLKCNRARGSLGRGKSKKRKT 818
BLAST of mRNA_L-elsbetiae_contig1808.5195.1 vs. uniprot
Match: A0A6H5JCI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCI8_9PHAE) HSP 1 Score: 299 bits (766), Expect = 4.470e-91 Identity = 141/170 (82.94%), Postives = 156/170 (91.76%), Query Frame = 3 Query: 3 LFDPPGSCTVHAVQGRTVEGTLIIHQARHRHADVHWLYTAVSRATGPSNVRVIDDIHRSESDMSDRERVSWVSRKVSSYIYADVAAGRLGPEEGRSHREALVQELLNSYGGRCNLCTCELVWAVYSERQPTLDRLDCSLPHTAENVDVKCLRCNRALGSLGRGRTKKKKV 512 LFDPPGSCTVHAVQGRTVEG LIIHQARHRHADVHWLYTAVSRATGPSNV VIDDIHRSESDMSDRER+SWVSRKVS+YIYADV+A RL +EG H++ALV+ELLNSY GRC+LC CELVWA+YSERQPTLDRLDC+LPHT NVDV CL+C+RA G+LGRG++KKKK Sbjct: 1219 LFDPPGSCTVHAVQGRTVEGRLIIHQARHRHADVHWLYTAVSRATGPSNVMVIDDIHRSESDMSDRERISWVSRKVSNYIYADVSAERLSADEGGQHKQALVEELLNSYWGRCSLCYCELVWALYSERQPTLDRLDCALPHTIGNVDVNCLKCSRARGNLGRGKSKKKKT 1388
BLAST of mRNA_L-elsbetiae_contig1808.5195.1 vs. uniprot
Match: A0A6H5L2B8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2B8_9PHAE) HSP 1 Score: 298 bits (763), Expect = 1.660e-90 Identity = 141/170 (82.94%), Postives = 154/170 (90.59%), Query Frame = 3 Query: 3 LFDPPGSCTVHAVQGRTVEGTLIIHQARHRHADVHWLYTAVSRATGPSNVRVIDDIHRSESDMSDRERVSWVSRKVSSYIYADVAAGRLGPEEGRSHREALVQELLNSYGGRCNLCTCELVWAVYSERQPTLDRLDCSLPHTAENVDVKCLRCNRALGSLGRGRTKKKKV 512 +FDPPGSCTVHAVQGRTVEG LIIHQARHRHADVHWLYT VSRATGPSNVRVIDDIHRSES+MSDRERVSWV+RKVSSYIYADVAAGR+ ++G HREALVQEL SYGGRCNLC EL+W + SERQPTLDRLDCSLPHT NVDVKCL+CNRA G LGRG+++KKK+ Sbjct: 1312 VFDPPGSCTVHAVQGRTVEGRLIIHQARHRHADVHWLYTGVSRATGPSNVRVIDDIHRSESNMSDRERVSWVTRKVSSYIYADVAAGRIKSDDGGQHREALVQELHRSYGGRCNLCNRELIWTINSERQPTLDRLDCSLPHTIGNVDVKCLKCNRARGGLGRGKSEKKKI 1481
BLAST of mRNA_L-elsbetiae_contig1808.5195.1 vs. uniprot
Match: A0A6H5K992_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K992_9PHAE) HSP 1 Score: 295 bits (756), Expect = 7.920e-90 Identity = 137/169 (81.07%), Postives = 154/169 (91.12%), Query Frame = 3 Query: 3 LFDPPGSCTVHAVQGRTVEGTLIIHQARHRHADVHWLYTAVSRATGPSNVRVIDDIHRSESDMSDRERVSWVSRKVSSYIYADVAAGRLGPEEGRSHREALVQELLNSYGGRCNLCTCELVWAVYSERQPTLDRLDCSLPHTAENVDVKCLRCNRALGSLGRGRTKKKK 509 LFDPPGSCTVH+VQGRTVEG L+IHQARH HAD++WLYTA+SRATGPSNV ++DD+HRS+S+MSDR RVSWVSRK+SSYIYADV AGRL P+EG HREAL +ELLNSYGGRC LC+CELVWAVYSERQPTLDRLDCSLPHT +N DVK LRCNRA GS GRGRTK+K+ Sbjct: 1134 LFDPPGSCTVHSVQGRTVEGRLVIHQARHPHADMNWLYTAISRATGPSNVSIVDDVHRSKSNMSDRGRVSWVSRKISSYIYADVTAGRLEPDEGMQHREALAEELLNSYGGRCCLCSCELVWAVYSERQPTLDRLDCSLPHTPDNADVKFLRCNRARGSQGRGRTKRKR 1302
BLAST of mRNA_L-elsbetiae_contig1808.5195.1 vs. uniprot
Match: D7FV89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV89_ECTSI) HSP 1 Score: 292 bits (748), Expect = 5.310e-89 Identity = 140/170 (82.35%), Postives = 151/170 (88.82%), Query Frame = 3 Query: 3 LFDPPGSCTVHAVQGRTVEGTLIIHQARHRHADVHWLYTAVSRATGPSNVRVIDDIHRSESDMSDRERVSWVSRKVSSYIYADVAAGRLGPEEGRSHREALVQELLNSYGGRCNLCTCELVWAVYSERQPTLDRLDCSLPHTAENVDVKCLRCNRALGSLGRGRTKKKKV 512 LFDPPGSCTVHAVQGRTVEG LIIHQARHRHADVHWLYTAVSRATGPSNV VIDD HR +S+MSDRER SWVSRKVSSYIYAD+A+GRLG +EG HREAL QEL +Y G CNLC ELVWAVYSERQPTLDRLDC+LPHT NVDVKCL+CNRA GSLGRG++KK+K Sbjct: 1058 LFDPPGSCTVHAVQGRTVEGRLIIHQARHRHADVHWLYTAVSRATGPSNVWVIDDAHRRDSNMSDRERASWVSRKVSSYIYADIASGRLGSDEGGQHREALAQELHRAYRGTCNLCHHELVWAVYSERQPTLDRLDCALPHTIGNVDVKCLKCNRARGSLGRGKSKKRKT 1227 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1808.5195.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1808.5195.1 >prot_L-elsbetiae_contig1808.5195.1 ID=prot_L-elsbetiae_contig1808.5195.1|Name=mRNA_L-elsbetiae_contig1808.5195.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=117bp MSDRERVSWVSRKVSSYIYADVAAGRLGPEEGRSHREALVQELLNSYGGRback to top mRNA from alignment at L-elsbetiae_contig1808:11326..11877+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1808.5195.1 ID=mRNA_L-elsbetiae_contig1808.5195.1|Name=mRNA_L-elsbetiae_contig1808.5195.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=552bp|location=Sequence derived from alignment at L-elsbetiae_contig1808:11326..11877+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1808:11326..11877+ >mRNA_L-elsbetiae_contig1808.5195.1 ID=mRNA_L-elsbetiae_contig1808.5195.1|Name=mRNA_L-elsbetiae_contig1808.5195.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=702bp|location=Sequence derived from alignment at L-elsbetiae_contig1808:11326..11877+ (Laminarionema elsbetiae ELsaHSoW15)back to top |