mRNA_L-elsbetiae_contig1808.5194.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1808.5194.1 vs. uniprot
Match: A0A6H5KSM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSM3_9PHAE) HSP 1 Score: 277 bits (708), Expect = 7.330e-84 Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 1 Query: 1 ASGMLQQRYADRIDAVMVTGCDEASAVGGKIVPVLGEVDRVKAELRTGQGKLGIESLRTGDAYLCFDAERTWYRDGFWALGALILDETRLRVLEARNALESCGACDFSYQCDAVFFRGSSSVQEKMRLRFSDLFKGD 411 ASGMLQQRYADRIDAVMVTGCDEASAVGGKIVPVLGEVDRVKAELRTGQGKLGIESLRTGDAYLC DAERTWYRDGFWALGALILDETRLRVLEARNALESCGACDFSYQCDAVFFRGSSSVQEKMRLRFSDLFKGD Sbjct: 707 ASGMLQQRYADRIDAVMVTGCDEASAVGGKIVPVLGEVDRVKAELRTGQGKLGIESLRTGDAYLCLDAERTWYRDGFWALGALILDETRLRVLEARNALESCGACDFSYQCDAVFFRGSSSVQEKMRLRFSDLFKGD 843
BLAST of mRNA_L-elsbetiae_contig1808.5194.1 vs. uniprot
Match: A0A6H5JTY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTY9_9PHAE) HSP 1 Score: 258 bits (660), Expect = 1.560e-77 Identity = 129/137 (94.16%), Postives = 129/137 (94.16%), Query Frame = 1 Query: 1 ASGMLQQRYADRIDAVMVTGCDEASAVGGKIVPVLGEVDRVKAELRTGQGKLGIESLRTGDAYLCFDAERTWYRDGFWALGALILDETRLRVLEARNALESCGACDFSYQCDAVFFRGSSSVQEKMRLRFSDLFKGD 411 ASGMLQQRYADRID VMVTGCDEA AVGG IVPVLGEVDRVKAELRTGQ KLGIESLRTGDAYLC DAERTWYRDGFWALGALILDETRLRVLEARNALESCGA FSYQCDAVFFRGSSSVQEKMRLRF DLFKGD Sbjct: 587 ASGMLQQRYADRIDTVMVTGCDEAFAVGGIIVPVLGEVDRVKAELRTGQEKLGIESLRTGDAYLCLDAERTWYRDGFWALGALILDETRLRVLEARNALESCGASGFSYQCDAVFFRGSSSVQEKMRLRFRDLFKGD 723
BLAST of mRNA_L-elsbetiae_contig1808.5194.1 vs. uniprot
Match: A0A6H5L909_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L909_9PHAE) HSP 1 Score: 250 bits (639), Expect = 1.600e-75 Identity = 125/133 (93.98%), Postives = 125/133 (93.98%), Query Frame = 1 Query: 1 ASGMLQQRYADRIDAVMVTGCDEASAVGGKIVPVLGEVDRVKAELRTGQGKLGIESLRTGDAYLCFDAERTWYRDGFWALGALILDETRLRVLEARNALESCGACDFSYQCDAVFFRGSSSVQEKMRLRFSDL 399 ASGMLQQRYADRIDAVM TGCDEA AVGGKIVPVLGEVDRVKAELRTGQ KLGIESLRTGD YLC DAERTWYRDGFWALGALILDETRLRVLEARNALESCGA FSYQCDAVFFRGSSSVQ KMRLRFSDL Sbjct: 257 ASGMLQQRYADRIDAVMATGCDEAFAVGGKIVPVLGEVDRVKAELRTGQEKLGIESLRTGDTYLCLDAERTWYRDGFWALGALILDETRLRVLEARNALESCGASGFSYQCDAVFFRGSSSVQGKMRLRFSDL 389
BLAST of mRNA_L-elsbetiae_contig1808.5194.1 vs. uniprot
Match: D7FWV6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWV6_ECTSI) HSP 1 Score: 245 bits (626), Expect = 1.710e-75 Identity = 120/137 (87.59%), Postives = 126/137 (91.97%), Query Frame = 1 Query: 1 ASGMLQQRYADRIDAVMVTGCDEASAVGGKIVPVLGEVDRVKAELRTGQGKLGIESLRTGDAYLCFDAERTWYRDGFWALGALILDETRLRVLEARNALESCGACDFSYQCDAVFFRGSSSVQEKMRLRFSDLFKGD 411 ASGMLQQRYA+RIDAVMVT CDEASAVGGK+VPVL EVDR KAELRTGQG+ GIE+LRTGDAYLCFDAERTWYRDGFWALGALILDETRLRVLEARNALESCGA DFSYQCDAVFFRG SV+E+MRL F LF GD Sbjct: 515 ASGMLQQRYANRIDAVMVTSCDEASAVGGKVVPVLCEVDRAKAELRTGQGEFGIEALRTGDAYLCFDAERTWYRDGFWALGALILDETRLRVLEARNALESCGASDFSYQCDAVFFRGPCSVREEMRLCFGHLFSGD 651
BLAST of mRNA_L-elsbetiae_contig1808.5194.1 vs. uniprot
Match: A0A6H5KCL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCL4_9PHAE) HSP 1 Score: 245 bits (626), Expect = 2.150e-74 Identity = 123/133 (92.48%), Postives = 125/133 (93.98%), Query Frame = 1 Query: 4 SGMLQQRYADRIDAVMVTGCDEASAVGGKIVPVLGEVDRVKAELRTGQGKLGIESLRTGDAYLCFDAERTWYRDGFWALGALILDETRLRVLEARNALESCGACDFSYQCDAVFFRGSSSVQEKMRLRFSDLF 402 SGMLQQRYADRIDAVMVT CDEASAVGGKIVPVL EVDRVKAELRT QG +GIESLRTGDAYLCFDA RTWYRDGFWALGALILDETRLRVLEARNALESCGA DFSYQCDAVFF+GSSSVQEKMRLR S LF Sbjct: 125 SGMLQQRYADRIDAVMVTSCDEASAVGGKIVPVLCEVDRVKAELRTRQGDVGIESLRTGDAYLCFDAGRTWYRDGFWALGALILDETRLRVLEARNALESCGASDFSYQCDAVFFKGSSSVQEKMRLRSSHLF 257
BLAST of mRNA_L-elsbetiae_contig1808.5194.1 vs. uniprot
Match: D7FV89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV89_ECTSI) HSP 1 Score: 247 bits (630), Expect = 2.040e-73 Identity = 121/137 (88.32%), Postives = 127/137 (92.70%), Query Frame = 1 Query: 1 ASGMLQQRYADRIDAVMVTGCDEASAVGGKIVPVLGEVDRVKAELRTGQGKLGIESLRTGDAYLCFDAERTWYRDGFWALGALILDETRLRVLEARNALESCGACDFSYQCDAVFFRGSSSVQEKMRLRFSDLFKGD 411 ASGMLQQRYA+RIDAVMVT CDEASAVGGK+VPVL EVDR KAELRTGQG+LGIE+LRTGDAYLCFDAERTWYRDGFWALGALILDETRLRVLEARNALESCGA DFSYQCDAVFFRG SV+E+MRL F LF GD Sbjct: 515 ASGMLQQRYANRIDAVMVTSCDEASAVGGKVVPVLCEVDRAKAELRTGQGELGIEALRTGDAYLCFDAERTWYRDGFWALGALILDETRLRVLEARNALESCGASDFSYQCDAVFFRGPCSVREEMRLCFGHLFSGD 651
BLAST of mRNA_L-elsbetiae_contig1808.5194.1 vs. uniprot
Match: A0A6H5KWL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWL4_9PHAE) HSP 1 Score: 241 bits (614), Expect = 1.330e-72 Identity = 118/136 (86.76%), Postives = 125/136 (91.91%), Query Frame = 1 Query: 4 SGMLQQRYADRIDAVMVTGCDEASAVGGKIVPVLGEVDRVKAELRTGQGKLGIESLRTGDAYLCFDAERTWYRDGFWALGALILDETRLRVLEARNALESCGACDFSYQCDAVFFRGSSSVQEKMRLRFSDLFKGD 411 SGMLQQRYADRIDAVMVT DEASAVGGKIVPVL EVDRVKAELRTGQG LGI+SL TGDAYLCFDAERTWYRDGFWALGA+ILDETRLRVLE RNALE CGA ++S+QCDAVFFRGSSSVQE MRLRF+ LF G+ Sbjct: 109 SGMLQQRYADRIDAVMVTSSDEASAVGGKIVPVLCEVDRVKAELRTGQGDLGIDSLHTGDAYLCFDAERTWYRDGFWALGAIILDETRLRVLETRNALELCGASEYSFQCDAVFFRGSSSVQENMRLRFNQLFSGN 244
BLAST of mRNA_L-elsbetiae_contig1808.5194.1 vs. uniprot
Match: A0A6H5JCS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCS9_9PHAE) HSP 1 Score: 221 bits (562), Expect = 4.280e-64 Identity = 125/199 (62.81%), Postives = 127/199 (63.82%), Query Frame = 1 Query: 1 ASGMLQQRYADRIDAVMVTGCDEASAVGGKIVPVLGEVDRVKAELRTGQGKLGIESLRTGDAYLCFDAERTWYRDGFWALGA--------------------------------------------------------------LILDETRLRVLEARNALESCGACDFSYQCDAVFFRGSSSVQEKMRLRFSDLFKGD 411 ASGMLQQRYADRIDAVMVT DEASAVGGKIVPVL EVDRVKAELRTGQG LGI+SL TGDAYLCFDAERTWYRDGFWALGA LILDETRLRVLEARNALES GA DFSYQCDAVFFRGSSSVQ+KMRLRF LF GD Sbjct: 701 ASGMLQQRYADRIDAVMVTSTDEASAVGGKIVPVLCEVDRVKAELRTGQGDLGIDSLHTGDAYLCFDAERTWYRDGFWALGAXDEASAVGGKIVPVLCEVDRVKAELRTGQGALGIESLRTGDAYLCFEAERTWYRDGFWALGTLILDETRLRVLEARNALESFGASDFSYQCDAVFFRGSSSVQDKMRLRFDHLFSGD 899
BLAST of mRNA_L-elsbetiae_contig1808.5194.1 vs. uniprot
Match: A0A6H5JHT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT1_9PHAE) HSP 1 Score: 219 bits (559), Expect = 9.490e-64 Identity = 111/137 (81.02%), Postives = 118/137 (86.13%), Query Frame = 1 Query: 1 ASGMLQQRYADRIDAVMVTGCDEASAVGGKIVPVLGEVDRVKAELRTGQGKLGIESLRTGDAYLCFDAERTWYRDGFWALGALILDETRLRVLEARNALESCGACDFSYQCDAVFFRGSSSVQEKMRLRFSDLFKGD 411 ASGMLQQ YADRIDAVMVT DEASA+GGKI+PVL EV R AELRTGQG LGIESLRTGDAYLC DAERTW RDGFWALGALILD+T LRVLE RNALESCGA DFSYQCD VFF+G SV+E+MRLR S LF G+ Sbjct: 540 ASGMLQQGYADRIDAVMVTSNDEASALGGKIMPVLCEVIRASAELRTGQGDLGIESLRTGDAYLCVDAERTWNRDGFWALGALILDDTPLRVLEERNALESCGASDFSYQCDTVFFKGPCSVREEMRLRSSHLFSGN 676
BLAST of mRNA_L-elsbetiae_contig1808.5194.1 vs. uniprot
Match: A0A6H5KEQ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEQ4_9PHAE) HSP 1 Score: 215 bits (547), Expect = 2.600e-62 Identity = 122/204 (59.80%), Postives = 125/204 (61.27%), Query Frame = 1 Query: 1 ASGMLQQRYADRIDAVMVTGCDEASAVGGKIVPVLGEVDRVKAELRTGQGKLGIESL-------------------------------------------------------------------RTGDAYLCFDAERTWYRDGFWALGALILDETRLRVLEARNALESCGACDFSYQCDAVFFRGSSSVQEKMRLRFSDLFKGD 411 ASG+LQQRYADRI AVMVT DEASAVGGKIVPVL EVDRVKAELRTGQG LGI+SL RTGDAY CFDAERTWYRDGFWALG LILDETRLRVLEARNALESCGA DFSYQCDAVFF GSSSVQE+MRLRF LF GD Sbjct: 580 ASGLLQQRYADRIGAVMVTSSDEASAVGGKIVPVLCEVDRVKAELRTGQGDLGIDSLHTGDAFLGFDAERTWYRDGFWELGALILDETRLRVLEARNALELCGAXDRVKAELRTGQGDLGIKSLRTGDAYRCFDAERTWYRDGFWALGTLILDETRLRVLEARNALESCGASDFSYQCDAVFFTGSSSVQERMRLRFDHLFSGD 783 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1808.5194.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1808.5194.1 >prot_L-elsbetiae_contig1808.5194.1 ID=prot_L-elsbetiae_contig1808.5194.1|Name=mRNA_L-elsbetiae_contig1808.5194.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=134bp MLQQRYADRIDAVMVTGCDEASAVGGKIVPVLGEVDRVKAELRTGQGKLGback to top mRNA from alignment at L-elsbetiae_contig1808:9702..10112+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1808.5194.1 ID=mRNA_L-elsbetiae_contig1808.5194.1|Name=mRNA_L-elsbetiae_contig1808.5194.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=411bp|location=Sequence derived from alignment at L-elsbetiae_contig1808:9702..10112+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1808:9702..10112+ >mRNA_L-elsbetiae_contig1808.5194.1 ID=mRNA_L-elsbetiae_contig1808.5194.1|Name=mRNA_L-elsbetiae_contig1808.5194.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=804bp|location=Sequence derived from alignment at L-elsbetiae_contig1808:9702..10112+ (Laminarionema elsbetiae ELsaHSoW15)back to top |