mRNA_L-elsbetiae_contig18052.5178.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig18052.5178.1 vs. uniprot
Match: D7FQK4_ECTSI (Heat shock protein 40 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQK4_ECTSI) HSP 1 Score: 331 bits (849), Expect = 5.440e-111 Identity = 162/168 (96.43%), Postives = 165/168 (98.21%), Query Frame = 1 Query: 1 QVQFRQIGPGMVQQLQSACSTCRGEGKVINERDKCKACNAKKVVTERKVLEVHITKGMRNGQKITFHGEADEAPGTVPGDIIFIVEEKEHPVFRRKGADLVIEKNLTLVESLCGFDFSITHMDKRTLRVRSNPGQVTKHDDVFMLDGEGMPTVGNPFVKGRLFVIFKV 504 QVQFRQIGPGMVQQLQSACS+CRGEGKVINERDKCK C+AKKVVTERKVLEVHITKGMRNGQKITFHGEADEAPG VPGDIIFIVEEKEH VFRRKGADLVIEKNLTLVESLCGFDFSITHMDKRTLRVRSNPGQVTKHDDVFMLDGEGMPT+GNPFVKGRLFVIFKV Sbjct: 188 QVQFRQIGPGMVQQLQSACSSCRGEGKVINERDKCKTCSAKKVVTERKVLEVHITKGMRNGQKITFHGEADEAPGVVPGDIIFIVEEKEHSVFRRKGADLVIEKNLTLVESLCGFDFSITHMDKRTLRVRSNPGQVTKHDDVFMLDGEGMPTIGNPFVKGRLFVIFKV 355
BLAST of mRNA_L-elsbetiae_contig18052.5178.1 vs. uniprot
Match: A0A835ZF72_9STRA (Heat shock protein 40 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF72_9STRA) HSP 1 Score: 246 bits (628), Expect = 1.160e-77 Identity = 110/168 (65.48%), Postives = 139/168 (82.74%), Query Frame = 1 Query: 1 QVQFRQIGPGMVQQLQSACSTCRGEGKVINERDKCKACNAKKVVTERKVLEVHITKGMRNGQKITFHGEADEAPGTVPGDIIFIVEEKEHPVFRRKGADLVIEKNLTLVESLCGFDFSITHMDKRTLRVRSNPGQVTKHDDVFMLDGEGMPTVGNPFVKGRLFVIFKV 504 Q+Q+RQIGPGMVQ++Q+ CS C GEGKVIN RD+C+ C KKVV ERKVLEVH+T GM+NG+KITFH EADE PG +PGD++F+++ K H F+RKGADL++EK L+L ESLCGFDF + HMD R LR+RS PG+VTKH+ + ++ EGMP GNP+VKGRLFV+FKV Sbjct: 184 QIQYRQIGPGMVQKMQATCSDCSGEGKVINPRDRCRECQGKKVVKERKVLEVHVTPGMKNGEKITFHEEADETPGMLPGDVVFVIQSKPHDTFQRKGADLIMEKKLSLAESLCGFDFVVQHMDGRALRLRSAPGKVTKHEHLQVIPHEGMPHAGNPYVKGRLFVLFKV 351
BLAST of mRNA_L-elsbetiae_contig18052.5178.1 vs. uniprot
Match: K3XBN2_GLOUD (Uncharacterized protein n=22 Tax=Oomycota TaxID=4762 RepID=K3XBN2_GLOUD) HSP 1 Score: 232 bits (592), Expect = 2.700e-72 Identity = 107/167 (64.07%), Postives = 133/167 (79.64%), Query Frame = 1 Query: 4 VQFRQIGPGMVQQLQSACSTCRGEGKVINERDKCKACNAKKVVTERKVLEVHITKGMRNGQKITFHGEADEAPGTVPGDIIFIVEEKEHPVFRRKGADLVIEKNLTLVESLCGFDFSITHMDKRTLRVRSNPGQVTKHDDVFMLDGEGMPTVGNPFVKGRLFVIFKV 504 VQ RQI PGMVQQ+QS C CRG+GK I E D+CK C KKV ERKVLEVHI KGMRNGQ+ITF GEAD+APGTVPGDIIF+V+EKEH F+RKGA+L++EK +TLVE+LCGF+ + H+D R L +++ PG++ K + + GEGMPT GNPFVKG+L ++FKV Sbjct: 184 VQLRQIAPGMVQQMQSVCPDCRGQGKSIRESDRCKHCKGKKVTKERKVLEVHIEKGMRNGQRITFSGEADQAPGTVPGDIIFVVQEKEHATFQRKGANLIMEKKITLVEALCGFEMIVEHLDGRHLHIKTRPGEIIKPNQFKAVHGEGMPTHGNPFVKGQLVILFKV 350
BLAST of mRNA_L-elsbetiae_contig18052.5178.1 vs. uniprot
Match: A0A6G0WI92_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WI92_9STRA) HSP 1 Score: 231 bits (588), Expect = 9.690e-72 Identity = 107/167 (64.07%), Postives = 132/167 (79.04%), Query Frame = 1 Query: 4 VQFRQIGPGMVQQLQSACSTCRGEGKVINERDKCKACNAKKVVTERKVLEVHITKGMRNGQKITFHGEADEAPGTVPGDIIFIVEEKEHPVFRRKGADLVIEKNLTLVESLCGFDFSITHMDKRTLRVRSNPGQVTKHDDVFMLDGEGMPTVGNPFVKGRLFVIFKV 504 +Q RQIGPGMVQQ+QS C CRG+GK I E DKCK C KV ERKVLEVHI KGMRNGQ+ITF GEAD+APGT+PGDIIF+V+EKEH VF+RKG +L++EK +TLVESLCGF+ + H+D R L ++S G+V K + ++GEGMP GNPFVKG+L ++FKV Sbjct: 182 IQMRQIGPGMVQQVQSVCPDCRGQGKTIRESDKCKVCKGNKVTKERKVLEVHIEKGMRNGQRITFSGEADQAPGTIPGDIIFVVQEKEHAVFQRKGGNLIMEKKITLVESLCGFETIVEHLDGRQLHIKSIAGEVIKPNQFKAVNGEGMPQHGNPFVKGQLVILFKV 348
BLAST of mRNA_L-elsbetiae_contig18052.5178.1 vs. uniprot
Match: A0A812UMV8_SYMMI (ATJ2 protein n=2 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UMV8_SYMMI) HSP 1 Score: 223 bits (569), Expect = 1.190e-69 Identity = 105/167 (62.87%), Postives = 128/167 (76.65%), Query Frame = 1 Query: 4 VQFRQIGPGMVQQLQSACSTCRGEGKVINERDKCKACNAKKVVTERKVLEVHITKGMRNGQKITFHGEADEAPGTVPGDIIFIVEEKEHPVFRRKGADLVIEKNLTLVESLCGFDFSITHMDKRTLRVRSNPGQVTKHDDVFMLDGEGMPTVGNPFVKGRLFVIFKV 504 VQ RQIGPGMVQQ+QSAC C+G GK++NE+DKC KK +RKVLE + KGM+NGQKI F GEADE PGT+ GD++F+V+EKEH F+RKGADLV L LVE+LCGF +ITHMD R LRV S G+V K D V++++GEGMP GNPF KGRLF+IF+V Sbjct: 116 VQLRQIGPGMVQQIQSACPACKGSGKIMNEKDKCXXXXGKKTYKDRKVLECQVEKGMKNGQKIRFAGEADELPGTIAGDVVFVVQEKEHETFKRKGADLVTHVQLDLVEALCGFTKTITHMDGRVLRVDSPVGRVVKPDSVYLIEGEGMPYHGNPFTKGRLFIIFRV 282
BLAST of mRNA_L-elsbetiae_contig18052.5178.1 vs. uniprot
Match: A0A1W0A380_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A380_9STRA) HSP 1 Score: 223 bits (569), Expect = 7.110e-69 Identity = 103/167 (61.68%), Postives = 131/167 (78.44%), Query Frame = 1 Query: 4 VQFRQIGPGMVQQLQSACSTCRGEGKVINERDKCKACNAKKVVTERKVLEVHITKGMRNGQKITFHGEADEAPGTVPGDIIFIVEEKEHPVFRRKGADLVIEKNLTLVESLCGFDFSITHMDKRTLRVRSNPGQVTKHDDVFMLDGEGMPTVGNPFVKGRLFVIFKV 504 +Q RQI PGMVQQ+QS C CRG+GK I E D+CKAC KV ERKVLEVHI KGMRN Q+ITF GEAD+APGT+ GDI+F+V+EKEH +F+RKGA+L++EK ++LVE+LCGF+ I H+D R L V++ PG+V K + + GEGMP GNPFVKG+L ++FKV Sbjct: 183 IQHRQIAPGMVQQVQSVCPDCRGQGKTIRESDRCKACKGNKVTKERKVLEVHIEKGMRNNQRITFKGEADQAPGTIAGDIVFVVQEKEHALFQRKGANLIMEKKISLVEALCGFETIIEHLDGRHLHVKTKPGEVIKPNQFKAIHGEGMPQHGNPFVKGQLVILFKV 349
BLAST of mRNA_L-elsbetiae_contig18052.5178.1 vs. uniprot
Match: T0RN49_SAPDV (DnaJ like subfamily A member 2 n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0RN49_SAPDV) HSP 1 Score: 223 bits (568), Expect = 1.010e-68 Identity = 102/167 (61.08%), Postives = 130/167 (77.84%), Query Frame = 1 Query: 4 VQFRQIGPGMVQQLQSACSTCRGEGKVINERDKCKACNAKKVVTERKVLEVHITKGMRNGQKITFHGEADEAPGTVPGDIIFIVEEKEHPVFRRKGADLVIEKNLTLVESLCGFDFSITHMDKRTLRVRSNPGQVTKHDDVFMLDGEGMPTVGNPFVKGRLFVIFKV 504 +Q RQI PGMVQQ+QS C CRG+GK I E D+CK C KV ERKVLEVHI KGMRNGQ+ITF GEAD+APGT+ GDI+F+V+EKEH F+RKGA+L++EK +TLVE+LCGF+ + H+D R L V++ PG+V K + + GEGMP GNPFVKG+L ++FK+ Sbjct: 183 IQHRQIAPGMVQQVQSVCPDCRGQGKTIRESDRCKGCKGNKVSKERKVLEVHIEKGMRNGQRITFTGEADQAPGTIAGDIVFVVQEKEHGTFQRKGANLIMEKKITLVEALCGFETIVEHLDGRHLHVKTKPGEVIKPNQFKAVQGEGMPQHGNPFVKGQLVILFKI 349
BLAST of mRNA_L-elsbetiae_contig18052.5178.1 vs. uniprot
Match: A0A067CDA0_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067CDA0_SAPPC) HSP 1 Score: 223 bits (568), Expect = 1.060e-68 Identity = 101/167 (60.48%), Postives = 130/167 (77.84%), Query Frame = 1 Query: 4 VQFRQIGPGMVQQLQSACSTCRGEGKVINERDKCKACNAKKVVTERKVLEVHITKGMRNGQKITFHGEADEAPGTVPGDIIFIVEEKEHPVFRRKGADLVIEKNLTLVESLCGFDFSITHMDKRTLRVRSNPGQVTKHDDVFMLDGEGMPTVGNPFVKGRLFVIFKV 504 +Q RQI PGMVQQ+QS C CRG+GK I + D+CK C KV ERKVLEVHI KGMRNGQ+ITF GEAD+APGT+ GDI+F+V+EKEH F+RKGA+L++EK +TLVE+LCGF+ + H+D R L V++ PG+V K + + GEGMP GNPFVKG+L ++FK+ Sbjct: 185 IQHRQIAPGMVQQVQSVCPDCRGQGKTIRDADRCKGCKGNKVTKERKVLEVHIEKGMRNGQRITFKGEADQAPGTIAGDIVFVVQEKEHATFQRKGANLIMEKKITLVEALCGFETIVEHLDGRHLHVKTKPGEVIKPNQFKAVHGEGMPQHGNPFVKGQLVILFKI 351
BLAST of mRNA_L-elsbetiae_contig18052.5178.1 vs. uniprot
Match: A0A6G0WI73_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WI73_9STRA) HSP 1 Score: 222 bits (566), Expect = 1.760e-68 Identity = 103/167 (61.68%), Postives = 129/167 (77.25%), Query Frame = 1 Query: 4 VQFRQIGPGMVQQLQSACSTCRGEGKVINERDKCKACNAKKVVTERKVLEVHITKGMRNGQKITFHGEADEAPGTVPGDIIFIVEEKEHPVFRRKGADLVIEKNLTLVESLCGFDFSITHMDKRTLRVRSNPGQVTKHDDVFMLDGEGMPTVGNPFVKGRLFVIFKV 504 +Q RQI PGMVQQ+QS CS CRG+GK I E DKCK C KV ERKVLEVHI KGMRNGQ+ITF GEAD+APG + GDI+F+V+EKEH VF+RKG +L++EK +TLVE+LCGF+ + H+D R L ++S G+V K + + GEGMP GNPFVKG+L ++FKV Sbjct: 178 IQMRQIAPGMVQQVQSVCSDCRGQGKTIRESDKCKVCKGNKVTKERKVLEVHIEKGMRNGQRITFKGEADQAPGLIAGDIVFVVQEKEHSVFQRKGGNLIMEKKITLVEALCGFETIVEHLDGRHLHIKSIAGEVIKPNQFKAVHGEGMPQHGNPFVKGQLVILFKV 344
BLAST of mRNA_L-elsbetiae_contig18052.5178.1 vs. uniprot
Match: A0A1V9Z143_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z143_9STRA) HSP 1 Score: 222 bits (566), Expect = 1.810e-68 Identity = 102/167 (61.08%), Postives = 131/167 (78.44%), Query Frame = 1 Query: 4 VQFRQIGPGMVQQLQSACSTCRGEGKVINERDKCKACNAKKVVTERKVLEVHITKGMRNGQKITFHGEADEAPGTVPGDIIFIVEEKEHPVFRRKGADLVIEKNLTLVESLCGFDFSITHMDKRTLRVRSNPGQVTKHDDVFMLDGEGMPTVGNPFVKGRLFVIFKV 504 +Q RQI PGMVQQ+QS C CRG+GK+INE D+C +C KKV ERKVLEVHI GMR+GQ+ITF GE+D+APG VPGDI+FIV+EKEH F+RKG +L++EK ++LVE+LCGF+ I H+D R L V++ PG+V K + + GEGMP GNPFVKG+L ++FKV Sbjct: 179 IQHRQIAPGMVQQVQSVCPDCRGQGKIINEADRCSSCKGKKVTKERKVLEVHIEPGMRHGQRITFKGESDQAPGVVPGDIVFIVQEKEHDTFQRKGPNLIMEKKISLVEALCGFECMIEHLDGRHLHVKTKPGEVIKPNQFKAVHGEGMPQHGNPFVKGQLVILFKV 345 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18052.5178.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig18052.5178.1 >prot_L-elsbetiae_contig18052.5178.1 ID=prot_L-elsbetiae_contig18052.5178.1|Name=mRNA_L-elsbetiae_contig18052.5178.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=160bp MVQQLQSACSTCRGEGKVINERDKCKACNAKKVVTERKVLEVHITKGMRNback to top mRNA from alignment at L-elsbetiae_contig18052:575..2802- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig18052.5178.1 ID=mRNA_L-elsbetiae_contig18052.5178.1|Name=mRNA_L-elsbetiae_contig18052.5178.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2228bp|location=Sequence derived from alignment at L-elsbetiae_contig18052:575..2802- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig18052:575..2802- >mRNA_L-elsbetiae_contig18052.5178.1 ID=mRNA_L-elsbetiae_contig18052.5178.1|Name=mRNA_L-elsbetiae_contig18052.5178.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=960bp|location=Sequence derived from alignment at L-elsbetiae_contig18052:575..2802- (Laminarionema elsbetiae ELsaHSoW15)back to top |