mRNA_L-elsbetiae_contig180.5162.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig180.5162.1 vs. uniprot
Match: D8LND8_ECTSI (Putative: flagellar associated protein, qilin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LND8_ECTSI) HSP 1 Score: 134 bits (337), Expect = 3.420e-36 Identity = 70/78 (89.74%), Postives = 76/78 (97.44%), Query Frame = 1 Query: 127 EAVSGSLGSTREGELIESGGREILARSRDNIAALRRQCEDLEADEAELSVKIKKKKNDLERGEKRLKSLQAHRPAFAD 360 +AVSGSLGSTRE ELIESGGREILARSRDNIAA+RRQCEDLEADEAEL+ KIKKK+N+L+RGEKRLKSLQAHRPAFAD Sbjct: 130 QAVSGSLGSTRESELIESGGREILARSRDNIAAMRRQCEDLEADEAELNAKIKKKRNELDRGEKRLKSLQAHRPAFAD 207
BLAST of mRNA_L-elsbetiae_contig180.5162.1 vs. uniprot
Match: A0A7S2RD03_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RD03_9STRA) HSP 1 Score: 116 bits (290), Expect = 1.970e-28 Identity = 62/120 (51.67%), Postives = 88/120 (73.33%), Query Frame = 1 Query: 1 LGNVKEARALATEITTRGARLHDLLGKEREARPQRLKAVAFLEAVSGSLGSTREGELIESGGREILARSRDNIAALRRQCEDLEADEAELSVKIKKKKNDLERGEKRLKSLQAHRPAFAD 360 L N+K ARALATEIT GARL DLLGKER+ R +R KA+ FL+A++G+L ST E E +E +E+++ ++NI ++++C+ LE +E +L KIK+K+ +LER EK L+ LQ RPAF D Sbjct: 129 LKNIKGARALATEITEGGARLFDLLGKERQVRHERAKALKFLDAIAGNLDSTAEHEYVEKSIQELVSAMKENIENMQKECKALEVNEQDLDEKIKRKQGELERQEKTLRRLQTVRPAFMD 248
BLAST of mRNA_L-elsbetiae_contig180.5162.1 vs. uniprot
Match: A0A836CCE3_9STRA (Clusterin-associated protein-1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCE3_9STRA) HSP 1 Score: 109 bits (272), Expect = 1.980e-25 Identity = 74/156 (47.44%), Postives = 88/156 (56.41%), Query Frame = 1 Query: 1 LGNVKEARALATEITTRGARLHDLLGKEREARPQRLKAVAFLEAVSGSLGSTR-------EGELIESGGREILARSRDNIAALRRQCEDLEADEAELSVKIKKKK-----------------------------NDLERGEKRLKSLQAHRPAFAD 360 LG+VKEARALA +IT RGARLHDLLG+E AR RL+A AFLEA E +E REI+AR+R+N+AAL+RQ DLEADE L +IKK + DLER EKRL+SL+ HRPAFAD Sbjct: 150 LGSVKEARALAADITERGARLHDLLGREPAARRARLRAAAFLEAXXXXXXXXXXXXXXXAEMGHVEGSLREIVARARENLAALQRQTADLEADERALDARIKKAQYVSADPEAARRAAHARMEVTDDNVAVHEAGDLERNEKRLRSLETHRPAFAD 305
BLAST of mRNA_L-elsbetiae_contig180.5162.1 vs. uniprot
Match: A0A7S3V1T9_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3V1T9_9STRA) HSP 1 Score: 108 bits (271), Expect = 2.860e-25 Identity = 58/120 (48.33%), Postives = 85/120 (70.83%), Query Frame = 1 Query: 1 LGNVKEARALATEITTRGARLHDLLGKEREARPQRLKAVAFLEAVSGSLGSTREGELIESGGREILARSRDNIAALRRQCEDLEADEAELSVKIKKKKNDLERGEKRLKSLQAHRPAFAD 360 L +VK R+LA+EIT +GA L DLLG+ERE +R + + FL+++S +L S + + +E E+L + +N +L +QCEDLE+D+ L KIKKK+++LER +KRLKSLQ+ RPAF D Sbjct: 296 LNDVKNTRSLASEITEKGALLFDLLGEERELGVERQQCLRFLDSISNNLNSHNDQQFLEQKLNELLKSASENTRSLEKQCEDLESDKKTLEAKIKKKQSELERNDKRLKSLQSVRPAFMD 415
BLAST of mRNA_L-elsbetiae_contig180.5162.1 vs. uniprot
Match: A0A6A5AI13_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AI13_9STRA) HSP 1 Score: 105 bits (263), Expect = 5.880e-25 Identity = 58/120 (48.33%), Postives = 80/120 (66.67%), Query Frame = 1 Query: 1 LGNVKEARALATEITTRGARLHDLLGKEREARPQRLKAVAFLEAVSGSLGSTREGELIESGGREILARSRDNIAALRRQCEDLEADEAELSVKIKKKKNDLERGEKRLKSLQAHRPAFAD 360 L + K RAL+ EIT GA+L+DLL E E R R++A+ FL+ VS +L ST E + +E + I+ ++N+ ++ RQC +L+A+E L KIKK + DLER EKRLKSLQ RPAF D Sbjct: 120 LKDAKATRALSAEITECGAKLYDLLDNELEVREARVQAIRFLDTVSSNLESTNEHKYLEKSIKSIIVSVQENVESMERQCSELDAEEKALGAKIKKAQGDLERSEKRLKSLQNVRPAFMD 239
BLAST of mRNA_L-elsbetiae_contig180.5162.1 vs. uniprot
Match: W4G1T9_9STRA (Uncharacterized protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G1T9_9STRA) HSP 1 Score: 105 bits (263), Expect = 1.970e-24 Identity = 58/120 (48.33%), Postives = 80/120 (66.67%), Query Frame = 1 Query: 1 LGNVKEARALATEITTRGARLHDLLGKEREARPQRLKAVAFLEAVSGSLGSTREGELIESGGREILARSRDNIAALRRQCEDLEADEAELSVKIKKKKNDLERGEKRLKSLQAHRPAFAD 360 L + K RAL+ EIT GA+L+DLL E E R R++A+ FL+ VS +L ST E + +E + I+ ++N+ ++ RQC +L+A+E L KIKK + DLER EKRLKSLQ RPAF D Sbjct: 131 LKDAKATRALSAEITECGAKLYDLLDNELEVREARVQAIRFLDTVSSNLESTNEHKYLEKSIKSIIVSVQENVESMERQCSELDAEEKALGAKIKKAQGDLERSEKRLKSLQNVRPAFMD 250
BLAST of mRNA_L-elsbetiae_contig180.5162.1 vs. uniprot
Match: A0A397DYX1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DYX1_9STRA) HSP 1 Score: 105 bits (262), Expect = 2.500e-24 Identity = 58/120 (48.33%), Postives = 80/120 (66.67%), Query Frame = 1 Query: 1 LGNVKEARALATEITTRGARLHDLLGKEREARPQRLKAVAFLEAVSGSLGSTREGELIESGGREILARSRDNIAALRRQCEDLEADEAELSVKIKKKKNDLERGEKRLKSLQAHRPAFAD 360 L + K RAL+ EIT GA+L+DLL E E R R++A+ FL+ VS +L ST E + +E + I+ ++N+ ++ RQC +L+A+E L KIKK + DLER EKRLKSLQ RPAF D Sbjct: 120 LKDAKVTRALSAEITECGAKLYDLLDNELEVREARVQAIRFLDTVSSNLESTNEHKYLEKSIKSIIVSVQENVESMERQCSELDAEEKALGAKIKKAQGDLERSEKRLKSLQNVRPAFMD 239
BLAST of mRNA_L-elsbetiae_contig180.5162.1 vs. uniprot
Match: A0A1V9YYS5_9STRA (Clusterin-associated protein 1 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YYS5_9STRA) HSP 1 Score: 102 bits (253), Expect = 4.480e-23 Identity = 57/120 (47.50%), Postives = 79/120 (65.83%), Query Frame = 1 Query: 1 LGNVKEARALATEITTRGARLHDLLGKEREARPQRLKAVAFLEAVSGSLGSTREGELIESGGREILARSRDNIAALRRQCEDLEADEAELSVKIKKKKNDLERGEKRLKSLQAHRPAFAD 360 L + K RAL+ EIT GA+L+DLL E + R R A+ FL+ VS +L ST E + +E + I+ ++N+A++ +QC +L+A+E L KIKK + DLER EKRLKSLQ RPAF D Sbjct: 132 LKDAKATRALSAEITDCGAKLYDLLDNELDVREARTNALRFLDTVSSNLESTAEHKFLEKSIKGIIESVQENVASMEQQCSELDAEEKALGAKIKKAQGDLERSEKRLKSLQNVRPAFMD 251
BLAST of mRNA_L-elsbetiae_contig180.5162.1 vs. uniprot
Match: A0A024TWD7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TWD7_9STRA) HSP 1 Score: 101 bits (252), Expect = 6.650e-23 Identity = 56/120 (46.67%), Postives = 80/120 (66.67%), Query Frame = 1 Query: 1 LGNVKEARALATEITTRGARLHDLLGKEREARPQRLKAVAFLEAVSGSLGSTREGELIESGGREILARSRDNIAALRRQCEDLEADEAELSVKIKKKKNDLERGEKRLKSLQAHRPAFAD 360 L + K RAL+ EIT GA+L+DLL E E R R++A+ FL+ V+ +L ST E + +E + I+ ++N+ ++ RQC +L+A+E L KIKK + DLER EKRLKSLQ RPAF + Sbjct: 131 LKDAKATRALSAEITECGAKLYDLLDNELEVREARVQAIRFLDTVTSNLESTYEHKYLEKSIKGIIVSVQENVESMERQCSELDAEEKALGAKIKKAQGDLERSEKRLKSLQNVRPAFME 250
BLAST of mRNA_L-elsbetiae_contig180.5162.1 vs. uniprot
Match: A0A7S2XXL0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXL0_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 2.870e-20 Identity = 48/87 (55.17%), Postives = 65/87 (74.71%), Query Frame = 1 Query: 1 LGNVKEARALATEITTRGARLHDLLGKEREARPQRLKAVAFLEAVSGSLGSTREGELIESGGREILARSRDNIAALRRQCEDLEADE 261 L ++KEAR+LA EIT +GARL+DLLG+E R R+KA+AFL+A+S +L ST + + IE RE++A +N ALR+QC DLEADE Sbjct: 39 LTSIKEARSLAGEITDKGARLYDLLGQEAGVRKARIKALAFLDAISSNLDSTSDHKYIEKSIRELVANVGENTTALRKQCNDLEADE 125 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig180.5162.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig180.5162.1 >prot_L-elsbetiae_contig180.5162.1 ID=prot_L-elsbetiae_contig180.5162.1|Name=mRNA_L-elsbetiae_contig180.5162.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=120bp LGNVKEARALATEITTRGARLHDLLGKEREARPQRLKAVAFLEAVSGSLGback to top mRNA from alignment at L-elsbetiae_contig180:41394..43249+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig180.5162.1 ID=mRNA_L-elsbetiae_contig180.5162.1|Name=mRNA_L-elsbetiae_contig180.5162.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1856bp|location=Sequence derived from alignment at L-elsbetiae_contig180:41394..43249+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig180:41394..43249+ >mRNA_L-elsbetiae_contig180.5162.1 ID=mRNA_L-elsbetiae_contig180.5162.1|Name=mRNA_L-elsbetiae_contig180.5162.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=720bp|location=Sequence derived from alignment at L-elsbetiae_contig180:41394..43249+ (Laminarionema elsbetiae ELsaHSoW15)back to top |