mRNA_L-elsbetiae_contig180.5161.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig180.5161.1 vs. uniprot
Match: D8LND8_ECTSI (Putative: flagellar associated protein, qilin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LND8_ECTSI) HSP 1 Score: 187 bits (476), Expect = 1.140e-56 Identity = 104/134 (77.61%), Postives = 107/134 (79.85%), Query Frame = 1 Query: 16 MRALGYPRSVSMDNFRTPNFQLVADALFWMVKRYDPDINVSDNIESEGDRVDFLTGVAAAMLNKAHIKLNAKKLYAADGHAVKELLKLATLLYSASKVEQEDGNDNGASSGLAGGD------DDTAEPPLVSQA 399 MRALGYPRSVSMDNFR PNFQLVAD L+WMVKRYDPDI VSDNIESE DRVDFLTGVA AMLNKAHIKLNAK+LYAADGHAVKELLKLATLLYSAS+VEQ ND G DD AE PL SQA Sbjct: 1 MRALGYPRSVSMDNFRAPNFQLVADVLYWMVKRYDPDIAVSDNIESENDRVDFLTGVAEAMLNKAHIKLNAKRLYAADGHAVKELLKLATLLYSASRVEQ---NDTGXXXXXXXXXXXXTFADDEAEAPLTSQA 131
BLAST of mRNA_L-elsbetiae_contig180.5161.1 vs. uniprot
Match: A0A836CCE3_9STRA (Clusterin-associated protein-1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCE3_9STRA) HSP 1 Score: 173 bits (439), Expect = 1.070e-48 Identity = 89/141 (63.12%), Postives = 108/141 (76.60%), Query Frame = 1 Query: 1 DFTEIMRALGYPRSVSMDNFRTPNFQLVADALFWMVKRYDPDINVSDNIESEGDRVDFLTGVAAAMLNKAHIKLNAKKLYAADGHAVKELLKLATLLYSASKVEQEDGNDNGASSGLAGGDDDTAEPPLVSQARRNTASGG 423 +FTE+MRALGYPR +S+DNFRTPNF+LVAD L+W+VKRYDPD+ +SDNIESEGDRVDFL G A AM KAHI++NA+KLY+ADGHAVKELLKLAT+LY AS+ E++ A G+D + PL SQ TA G Sbjct: 8 NFTEMMRALGYPRLISVDNFRTPNFELVADILYWLVKRYDPDVPISDNIESEGDRVDFLLGAAQAMAAKAHIRMNARKLYSADGHAVKELLKLATVLYRASRAEED---------AAAEGEDASDPAPLASQGGVVTADAG 139
BLAST of mRNA_L-elsbetiae_contig180.5161.1 vs. uniprot
Match: A0A7S2RCX5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RCX5_9STRA) HSP 1 Score: 147 bits (372), Expect = 2.690e-43 Identity = 72/106 (67.92%), Postives = 89/106 (83.96%), Query Frame = 1 Query: 1 DFTEIMRALGYPRSVSMDNFRTPNFQLVADALFWMVKRYDPDINVSDNIESEGDRVDFLTGVAAAMLNKAHIKLNAKKLYAADGHAVKELLKLATLLYSASKVEQE 318 +FTEIMR+LGYPR +S++NFRTPNFQLVAD L+WM+KRYDP I+V++ I++E DRV+FL A AM KA IKLN K+LYAADG AVKELLK+A LYSAS+V+ E Sbjct: 8 NFTEIMRSLGYPRLISVENFRTPNFQLVADVLYWMIKRYDPAIHVTEEIDTEDDRVEFLCSAAQAMAAKAKIKLNTKRLYAADGRAVKELLKIAQELYSASRVQAE 113
BLAST of mRNA_L-elsbetiae_contig180.5161.1 vs. uniprot
Match: A0A7S1TSM4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TSM4_9STRA) HSP 1 Score: 150 bits (379), Expect = 1.490e-42 Identity = 73/107 (68.22%), Postives = 90/107 (84.11%), Query Frame = 1 Query: 1 DFTEIMRALGYPRSVSMDNFRTPNFQLVADALFWMVKRYDPDINVSDNIESEGDRVDFLTGVAAAMLNKAHIKLNAKKLYAADGHAVKELLKLATLLYSASKVEQED 321 DFTEIMR LGY R +S++NFRTPNF+LVAD L+WMVKRYDP I + D+IESE DRV+FLT +A M +KA I LNAK+LYAADGHAVKELLKLAT+L+ A++ + +D Sbjct: 86 DFTEIMRNLGYQRLISLENFRTPNFELVADVLYWMVKRYDPAIGIPDSIESEEDRVEFLTVIAHQMYSKAQITLNAKRLYAADGHAVKELLKLATMLHKAARTQVQD 192
BLAST of mRNA_L-elsbetiae_contig180.5161.1 vs. uniprot
Match: A0A7S2HTN9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HTN9_9STRA) HSP 1 Score: 150 bits (380), Expect = 6.760e-42 Identity = 71/103 (68.93%), Postives = 90/103 (87.38%), Query Frame = 1 Query: 1 DFTEIMRALGYPRSVSMDNFRTPNFQLVADALFWMVKRYDPDINVSDNIESEGDRVDFLTGVAAAMLNKAHIKLNAKKLYAADGHAVKELLKLATLLYSASKV 309 +FTE+MRALGYPR +S+DNFRTPNF+LVAD L+WMVKRYDP ++SD I++E DRV+FLT +A AM KA +KLNAK+LYAADG AVKELLK++T+LY AS++ Sbjct: 8 NFTEMMRALGYPRLISVDNFRTPNFELVADVLYWMVKRYDPGTSLSDVIDTEDDRVEFLTSIAQAMAVKAKVKLNAKRLYAADGRAVKELLKISTMLYDASRI 110
BLAST of mRNA_L-elsbetiae_contig180.5161.1 vs. uniprot
Match: F0YCH5_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCH5_AURAN) HSP 1 Score: 150 bits (378), Expect = 9.710e-42 Identity = 75/105 (71.43%), Postives = 88/105 (83.81%), Query Frame = 1 Query: 4 FTEIMRALGYPRSVSMDNFRTPNFQLVADALFWMVKRYDPDINVSDNIESEGDRVDFLTGVAAAMLNKAHIKLNAKKLYAADGHAVKELLKLATLLYSASKVEQE 318 F E+MRALGY R VS++NFR PNF+LVA AL+WMVKRYDP+INVSD IE E DRVDFLT A A+ +KA IKLN K+LYAADG AVKELLK+AT+LY+ASK +E Sbjct: 9 FAEMMRALGYQRLVSVENFRKPNFELVASALYWMVKRYDPEINVSDCIEKEDDRVDFLTVTAQALASKAKIKLNTKRLYAADGRAVKELLKVATMLYNASKANEE 113
BLAST of mRNA_L-elsbetiae_contig180.5161.1 vs. uniprot
Match: A0A7S2RD03_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RD03_9STRA) HSP 1 Score: 147 bits (372), Expect = 5.370e-40 Identity = 72/106 (67.92%), Postives = 89/106 (83.96%), Query Frame = 1 Query: 1 DFTEIMRALGYPRSVSMDNFRTPNFQLVADALFWMVKRYDPDINVSDNIESEGDRVDFLTGVAAAMLNKAHIKLNAKKLYAADGHAVKELLKLATLLYSASKVEQE 318 +FTEIMR+LGYPR +S++NFRTPNFQLVAD L+WM+KRYDP I+V++ I++E DRV+FL A AM KA IKLN K+LYAADG AVKELLK+A LYSAS+V+ E Sbjct: 8 NFTEIMRSLGYPRLISVENFRTPNFQLVADVLYWMIKRYDPAIHVTEEIDTEDDRVEFLCSAAQAMAAKAKIKLNTKRLYAADGRAVKELLKIAQELYSASRVQAE 113
BLAST of mRNA_L-elsbetiae_contig180.5161.1 vs. uniprot
Match: UPI000642F669 (clusterin-associated protein 1 n=1 Tax=Condylura cristata TaxID=143302 RepID=UPI000642F669) HSP 1 Score: 140 bits (352), Expect = 1.540e-38 Identity = 66/112 (58.93%), Postives = 88/112 (78.57%), Query Frame = 1 Query: 1 DFTEIMRALGYPRSVSMDNFRTPNFQLVADALFWMVKRYDPDINVSDNIESEGDRVDFLTGVAAAMLNKAHIKLNAKKLYAADGHAVKELLKLATLLYSASKVEQEDGNDNG 336 DFTE+MRALGYPR +SM+NFRTPNF LV++ L W+VKRY+P ++ ++E+E DRV F+ +A M KAHIKLN KKLY ADG+AVKELLK+ ++LY+A K + +G+D G Sbjct: 22 DFTEMMRALGYPRHISMENFRTPNFGLVSEVLLWLVKRYEPQTDIPSDVETEQDRVFFIKAIAQFMATKAHIKLNTKKLYQADGYAVKELLKITSVLYNAMKTKGLEGSDMG 133
BLAST of mRNA_L-elsbetiae_contig180.5161.1 vs. uniprot
Match: A0A0P1B256_PLAHL (Predicted coiled-coil protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B256_PLAHL) HSP 1 Score: 143 bits (360), Expect = 4.080e-38 Identity = 67/104 (64.42%), Postives = 87/104 (83.65%), Query Frame = 1 Query: 1 DFTEIMRALGYPRSVSMDNFRTPNFQLVADALFWMVKRYDPDINVSDNIESEGDRVDFLTGVAAAMLNKAHIKLNAKKLYAADGHAVKELLKLATLLYSASKVE 312 + TE+MR+LGYPR +SM+NFR PNF+LV+D L+WMVK+Y+P NVS+ I++E DRV+FLT V +L KAHI+LN KKLYAADG AVKELLKLA +LY AS+++ Sbjct: 8 NLTEMMRSLGYPRPISMENFRLPNFELVSDLLYWMVKKYEPSANVSEEIDTEDDRVEFLTQVTVEVLAKAHIRLNPKKLYAADGFAVKELLKLAQVLYEASRID 111
BLAST of mRNA_L-elsbetiae_contig180.5161.1 vs. uniprot
Match: A0A6I9NE88_9TELE (clusterin-associated protein 1 homolog n=1 Tax=Notothenia coriiceps TaxID=8208 RepID=A0A6I9NE88_9TELE) HSP 1 Score: 135 bits (339), Expect = 5.100e-38 Identity = 61/105 (58.10%), Postives = 85/105 (80.95%), Query Frame = 1 Query: 1 DFTEIMRALGYPRSVSMDNFRTPNFQLVADALFWMVKRYDPDINVSDNIESEGDRVDFLTGVAAAMLNKAHIKLNAKKLYAADGHAVKELLKLATLLYSASKVEQ 315 +FTE+MRALGYPR +SM+NFR+PNF LVA+ L W+VKRY+P +++ ++++E DR+ F+ VA M KAHIKLN K+LY ADG+AVKE+LK+ ++LYSA K +Q Sbjct: 8 NFTEMMRALGYPRLISMENFRSPNFTLVAEILIWLVKRYEPQMDIPTDVDTESDRIFFIKAVAQFMATKAHIKLNTKRLYQADGYAVKEMLKITSVLYSAMKTKQ 112 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig180.5161.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig180.5161.1 >prot_L-elsbetiae_contig180.5161.1 ID=prot_L-elsbetiae_contig180.5161.1|Name=mRNA_L-elsbetiae_contig180.5161.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=138bp MRALGYPRSVSMDNFRTPNFQLVADALFWMVKRYDPDINVSDNIESEGDRback to top mRNA from alignment at L-elsbetiae_contig180:39228..40963+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig180.5161.1 ID=mRNA_L-elsbetiae_contig180.5161.1|Name=mRNA_L-elsbetiae_contig180.5161.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1736bp|location=Sequence derived from alignment at L-elsbetiae_contig180:39228..40963+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig180:39228..40963+ >mRNA_L-elsbetiae_contig180.5161.1 ID=mRNA_L-elsbetiae_contig180.5161.1|Name=mRNA_L-elsbetiae_contig180.5161.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=828bp|location=Sequence derived from alignment at L-elsbetiae_contig180:39228..40963+ (Laminarionema elsbetiae ELsaHSoW15)back to top |