mRNA_L-elsbetiae_contig1799.5147.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1799.5147.1
Unique NamemRNA_L-elsbetiae_contig1799.5147.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1799.5147.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 2.300e-28
Identity = 75/152 (49.34%), Postives = 94/152 (61.84%), Query Frame = 1
Query:  301 AGTQAEVEMVECLLRSSADETILNDQGKAAADLVGG------------EHVRELLANALADRAWRRRGYLVLCRARLDRVQLMQESNSSTTANVACSIASDATLERTQASGCAETAVDSAVNERTGGDWVGVLVKVLGVQEEGIFRTIVEYL 720
            AG Q   E+V  LLR+ ADETI N QG  A D++G             E VRELLANA ADRAWRRRGYL++CRA+ DRV   + ++ +   NVA    S A + R +       A +S V+E TGG+W  V+ KV+ +QEEGIFRTIVEYL
Sbjct:  254 AGRQGAAEVVNSLLRAGADETIANVQGNKAVDMIGEDVEEEDRLTEDVERVRELLANAPADRAWRRRGYLIMCRAQPDRVPERRMTSGTHYTNVARRTRSRAKMARARG-----IAGESTVDESTGGNWAVVVSKVISLQEEGIFRTIVEYL 400          
BLAST of mRNA_L-elsbetiae_contig1799.5147.1 vs. uniprot
Match: D7G137_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G137_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 2.140e-20
Identity = 123/250 (49.20%), Postives = 142/250 (56.80%), Query Frame = 1
Query:   13 VEILSAVIEHGADVNAAETERQTTPLHCAAFESGAQAIDILVGAGANTKVRNYKGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGT---QAEVEMVECLLRSSADETILNDQGKAAADLVG-----------GEHVRELLANALADRAWRRRGYLVLCRARLDRVQLMQESNSSTTANVACSIASDATLERTQASGCAETAVDSAVNERTGGDWVGVLVKVLGVQEEGIFRTIVEYL 720
            VEIL  +I+HG +VN A      T LH AA  + A AID+LVGAGA+ + RN  GS   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA     +  V++V  LLR  ADETI+  QGK AAD +G            E  R LL  A ADRAWRRRG LVLC A  DR+QL                                           GGD  G++ +VLG++E G+FRTIV YL
Sbjct:  183 VEILRMLIDHGMEVNLAAAFG--TALHWAAKANRANAIDVLVGAGADIQARNMSGSRPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKVGQRRGSVQVVGLLLRWGADETIVCKQGKTAADRIGTRRFPSTEPGDDERARSLLTRAPADRAWRRRGLLVLCHAYPDRLQL-------------------------------------------GGDLAGLVDRVLGLEEVGVFRTIVLYL 387          
BLAST of mRNA_L-elsbetiae_contig1799.5147.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 1.030e-16
Identity = 65/155 (41.94%), Postives = 83/155 (53.55%), Query Frame = 1
Query:  301 AGTQAEVEMVECLLRSSADETILNDQGKAAADLVG----------GEHV---RELLANALADRAWRRRGYLVLCRARLDRVQLMQESNSSTTANVACSIASDATLERTQA--SGCAETAVDSAVNERTGGDWVGVLVKVLGVQEEGIFRTIVEYL 720
            AG Q   E+V+ LLR  ADET  +  G+  AD VG          G  V    ELLANA ADRAWRRRG LVLCRA L R +L QE    T   ++    S A L R+ A  +GC     +      TG +W     +V+ ++EEGIFR++V +L
Sbjct:  272 AGRQGSAELVDLLLRRGADETTPDRNGQQPADRVGHCMELGDVLLGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQEDGGDTRGGLSRRTRSRAKLARSDAVGAGCRRGTPEGG----TGDEWRSASKRVVELEEEGIFRSVVGFL 422          
BLAST of mRNA_L-elsbetiae_contig1799.5147.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 9.690e-16
Identity = 80/255 (31.37%), Postives = 105/255 (41.18%), Query Frame = 1
Query:    7 GHVEILSAVIEHGADVNAAETERQTTPLHCAAFESGAQAIDILVGAGANTKVRNYKGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----AGTQAEVEMVECLLRSSADETILNDQGKAAADLVGG------------EHVRELLANALADRAWRRRGYLVLCRARLDRVQLMQESNSSTTANVACSIASDATLERTQASGCAETAVDSAVNERTGGDWVGVLVKVLGVQEEGIFRTIVEYL 720
            GHV+ +  +IEHGADV+A         LH A   +  +A+D+L+ AGAN +  +  G                                              AG Q  VE+V+ LLR  ADET +   G  AAD +G             E VR+LLANA ADRAWRRR  LVLCRAR D++QL  +                  + R +A                         +VLG+ EEGIFRTIV ++
Sbjct:  171 GHVDFIRTLIEHGADVDATNYGG-VAALHHATANNKVEAMDVLLRAGANARSMSESGHTVLHMAAITRTRTEAATLAVLLKHGADVNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDRIPEEFEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQLSSDR-----------------IARLEA-------------------------RVLGLVEEGIFRTIVRFI 382          
BLAST of mRNA_L-elsbetiae_contig1799.5147.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 5.390e-14
Identity = 64/194 (32.99%), Postives = 90/194 (46.39%), Query Frame = 1
Query:   19 ILSAVIEHGADVNAAETERQT---TPLHCAAFESGAQAIDILVGAGANTKVRNYKGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--AGTQAEVEMVECLLRSSADETILNDQGKAAADLVGG--------------EHVRELLANALADRAWRRRGYLVLCRARLDRVQLMQESNSSTTAN 543
            +L A+++HG DVN     R+T   T LH AA  +   AID+LV AGA+ +V +                                              AG Q    +V+ LLR  ADET LN  G+ AA++VG               E VR+LL NA  DRAWRRRG+LVLCRA   + + ++ ++S+ ++N
Sbjct:  122 VLRAILQHGVDVN-----RRTDGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACINHCHEAALALYKHGSNIEARDIRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRAFWIKARRLRAASSNASSN 310          
BLAST of mRNA_L-elsbetiae_contig1799.5147.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 1.960e-13
Identity = 65/190 (34.21%), Postives = 87/190 (45.79%), Query Frame = 1
Query:   19 ILSAVIEHGADVNAAETERQT---TPLHCAAFESGAQAIDILVGAGANTKVRNYKGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--AGTQAEVEMVECLLRSSADETILNDQGKAAADLVGG--------------EHVRELLANALADRAWRRRGYLVLCRARLDRVQLMQESNSS 531
            +L A+++HG DVN     R+T   T LH AA  +   AID+LV AGA+ +V +                                              AG Q    +V+ LLR  ADET LN  G+ AA++VG               E VR+LL NA ADRAWRRRG LVLCRA   + + ++ ++SS
Sbjct:  171 VLRAILQHGVDVN-----RRTDGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACSNHCHEAALALFKHGANIEARDMRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRAFWIKSRRLRAASSS 355          
BLAST of mRNA_L-elsbetiae_contig1799.5147.1 vs. uniprot
Match: A0A6H5JMJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMJ6_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 1.200e-12
Identity = 94/174 (54.02%), Postives = 112/174 (64.37%), Query Frame = 1
Query:   22 LSAVIEHGADVNAAETERQTTPLHCAAFESGAQAIDILVGAGANTKVRNYKGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA--GTQAEVEMVECLLRSSADETILNDQGKAAADLVGGE------------HVRELLANALADRAWRRRGYLVLCRARLDR 501
            +SA IE GA+V+AA+   +T P H AA  +  + ID+LV              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    A  G + + E+V+ LLRS ADETIL+ +G+AA D++  E             VR+LL NA ADRAW RR YLVLCR   DR
Sbjct:    1 MSAAIERGAEVDAADAVERTPPHH-AALLNNVEEIDVLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSATAVAGFEGDTEVVDSLLRSGADETILDSEGRAAVDMISWEVAGLHLSGEQDDRVRDLLVNAQADRAWHRRRYLVLCRTHPDR 173          
BLAST of mRNA_L-elsbetiae_contig1799.5147.1 vs. uniprot
Match: D7G1U1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U1_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 2.320e-12
Identity = 55/144 (38.19%), Postives = 68/144 (47.22%), Query Frame = 1
Query:  322 EMVECLLRSSADETILNDQGKAAADLVG-----------GEHVRELLANALADRAWRRRGYLVLCRARLDRVQLMQESNSSTTANVACSIASDATLERTQASGCAETAVDSAVNERTGGDWVGVLVKVLGVQEEGIFRTIVEYL 720
            ++V+ LLR  ADETI++ QG+ AAD +G            E  R LLA A ADRAWRRRG LVLCRA  DR+QL                                           GGD  G++  V G++E G+FRTIV YL
Sbjct:  291 QVVDLLLRWGADETIVSKQGETAADSIGTRRCHRTDPEDDERARSLLARAPADRAWRRRGLLVLCRAHPDRLQL-------------------------------------------GGDLAGLVAGVGGLEEVGVFRTIVLYL 391          
BLAST of mRNA_L-elsbetiae_contig1799.5147.1 vs. uniprot
Match: D7G981_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G981_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 8.130e-12
Identity = 60/153 (39.22%), Postives = 84/153 (54.90%), Query Frame = 1
Query:  301 AGTQAEVEMVECLLRSSADETILNDQGKAAADLVGG------------EHVRELLANALADRAWRRRGYLVLCRARLDRVQLMQESNSSTTANVACSIASDATL-ERTQASGCAETAVDSAVNERTGGDWVGVLVKVLGVQEEGIFRTIVEYL 720
            AG +  VE+V+ LLR +ADET  +  G    ++VG             + V +LL  A  DRAWRRRG LVLCRA  +R+ L Q ++    + V     S   L ER Q +G   +   +A + RT  +W  ++ +VLG+ +EGIFRTIV YL
Sbjct:  250 AGDEGAVEVVDLLLRWNADETDDDAYGHTPGNIVGCMTPETDSMFVNVQRVWKLLQYAPQDRAWRRRGMLVLCRAHPERLGLRQNASHVQESTVLRVTRSRTKLVEREQVAG--GSGEGAAADGRTAREWSNMVYRVLGL-DEGIFRTIVGYL 399          
BLAST of mRNA_L-elsbetiae_contig1799.5147.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 1.080e-9
Identity = 77/252 (30.56%), Postives = 103/252 (40.87%), Query Frame = 1
Query:   40 HGADVNAAETERQTTPLHCAAFESGAQAIDILVGAGANTKVR-NYKGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTQAEVEMVECLLRSSADETILNDQGKAAADLV------------GGEHVRELLANALADRAWRRRGYLVLCRARLD--RVQLMQESNSSTTANVACSIASDATLERTQASGCAETAVDSAVNERTGGDWVGVLVKVLG-------VQEEG---IFRTIVEYL 720
            HG DVNA +     T L  A+    A AID+L  AGAN + + N                                            AG+    EMV+ LLR  ADET +++ G  AAD+V              + VR+LLA A ADRAWRRRG+L+L RA     RVQ    ++ +  A VA         +RT++         S    R   DW GV+  ++G       +  +G   IF  IV YL
Sbjct:  546 HGGDVNA-KVNNGITALRVASAFDKAPAIDVLTEAGANIEAQANGSTPLHVASQEGRLAAGIALLRHGASVGKKNAAAQTPLHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAAGVA---------KRTRS---------SEEPSRAEIDWAGVVSMLMGDGVDPISLMGDGANLIFEKIVGYL 778          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1799.5147.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
A0A6H5KXK5_9PHAE2.300e-2849.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G137_ECTSI2.140e-2049.20Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D7FYD0_ECTSI1.030e-1641.94Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
D7FKL4_ECTSI9.690e-1631.37Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
D7G6X8_ECTSI5.390e-1432.99Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5KNU3_9PHAE1.960e-1334.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMJ6_9PHAE1.200e-1254.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1U1_ECTSI2.320e-1238.19Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D7G981_ECTSI8.130e-1239.22Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
A0A6H5JHY9_9PHAE1.080e-930.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1799contigL-elsbetiae_contig1799:12892..14616 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score95.9
Seed ortholog evalue1.9e-17
Seed eggNOG ortholog2880.D7FYD0
KEGG koko:K21440
Hectar predicted targeting categoryother localisation
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Exons2
Model size800
Cds size498
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1799.5147.1prot_L-elsbetiae_contig1799.5147.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1799 13117..13614 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815749.3836994-UTR-L-elsbetiae_contig1799:12891..131161622815749.3836994-UTR-L-elsbetiae_contig1799:12891..13116Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1799 12892..13116 +
1691683077.8867543-UTR-L-elsbetiae_contig1799:12891..131161691683077.8867543-UTR-L-elsbetiae_contig1799:12891..13116Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1799 12892..13116 +
1622815749.4046216-UTR-L-elsbetiae_contig1799:13614..136191622815749.4046216-UTR-L-elsbetiae_contig1799:13614..13619Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1799 13615..13619 +
1691683077.9138494-UTR-L-elsbetiae_contig1799:13614..136191691683077.9138494-UTR-L-elsbetiae_contig1799:13614..13619Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1799 13615..13619 +
1622815749.41898-UTR-L-elsbetiae_contig1799:14544..146161622815749.41898-UTR-L-elsbetiae_contig1799:14544..14616Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1799 14545..14616 +
1691683077.9245107-UTR-L-elsbetiae_contig1799:14544..146161691683077.9245107-UTR-L-elsbetiae_contig1799:14544..14616Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1799 14545..14616 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815749.393632-CDS-L-elsbetiae_contig1799:13116..136141622815749.393632-CDS-L-elsbetiae_contig1799:13116..13614Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1799 13117..13614 +
1691683077.8982453-CDS-L-elsbetiae_contig1799:13116..136141691683077.8982453-CDS-L-elsbetiae_contig1799:13116..13614Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1799 13117..13614 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1799.5147.1

>prot_L-elsbetiae_contig1799.5147.1 ID=prot_L-elsbetiae_contig1799.5147.1|Name=mRNA_L-elsbetiae_contig1799.5147.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=166bp
MALLRHGADVNSQDNDRQTPLHIAAAGTQAEVEMVECLLRSSADETILND
QGKAAADLVGGEHVRELLANALADRAWRRRGYLVLCRARLDRVQLMQESN
SSTTANVACSIASDATLERTQASGCAETAVDSAVNERTGGDWVGVLVKVL
GVQEEGIFRTIVEYL*
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mRNA from alignment at L-elsbetiae_contig1799:12892..14616+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1799.5147.1 ID=mRNA_L-elsbetiae_contig1799.5147.1|Name=mRNA_L-elsbetiae_contig1799.5147.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1725bp|location=Sequence derived from alignment at L-elsbetiae_contig1799:12892..14616+ (Laminarionema elsbetiae ELsaHSoW15)
AAGGGTGGGCATGTGGAGATTTTGAGCGCGGTGATCGAGCATGGGGCGGA CGTGAATGCTGCTGAGACGGAACGTCAAACTACTCCTCTTCATTGTGCAG CGTTTGAAAGCGGGGCGCAGGCCATCGATATCCTCGTGGGGGCTGGGGCC AATACCAAAGTACGCAATTATAAAGGCTCTACACCTCTTCATACTGCTGC CCGTTGGTGCAATCTCGAAGCCTTGATGGCCCTGTTGAGGCATGGTGCGG ACGTTAACTCCCAGGACAACGACCGACAAACGCCGTTGCACATTGCAGCA GCCGGAACGCAAGCAGAGGTGGAAATGGTGGAGTGTCTGTTGAGGTCAAG TGCGGACGAGACTATCCTCAACGACCAAGGCAAAGCAGCCGCGGACCTGG TCGGTGGCGAGCACGTGCGCGAGCTGCTGGCGAATGCTCTGGCCGACAGA GCATGGCGTCGCCGGGGCTACCTAGTCCTGTGCCGTGCTCGCCTCGACAG GGTGCAGCTGATGCAGGAGAGCAACAGCAGTACAACTGCCAATGTGGCAT GTAGCATTGCCAGTGATGCTACACTAGAGAGGACACAAGCAAGTGGTTGC GCTGAGACAGCAGTAGATAGCGCTGTGAACGAGCGTACAGGCGGCGACTG GGTGGGTGTGTTGGTGAAAGTGCTGGGAGTGCAGGAGGAGGGCATCTTTC GGACGATCGTGGAGTATCTTTGAGATCGGTGAGCTTACGTTTGTAACCAT TCTAGCCATCACATTTAGGGCAAGTATACATCGCGTGTGTATTCCACGCA TGTGCGCATCATTTTGGGGGATGAAGCGGTTCATGCAGAGATGTAGCCTG TGCACGGCATTATGTAGTTTCCTCCTGGTATATGCTCCTAGTTTGTAAGA GTGTCACCTCGGCGTGCTTACAACTAAGTTGATGTTTGTTCTGTCGCAAG TTGCCGTGTACCGGATCTACCGTCGGTCTCCAGCTTAGATCGTGCGCTTT ATCACCGAGGTATTGGCCTTGAATGTACCGAGATTTGCACAAGCCGAGGA CAGATACGCGTGTGCACGAAAGTCGTACTTGTATTGTAGGGTGGAGGAAT TTTCACATGTGGACCACAACCAAGCCCGTTGCCGCTGAAGTATTTTGAAT CCGAGGTTTTCGCATGGTAAATATACCCGAGGGTGCTCGAATTGAGTTGG CCAGAGCTCCTCGGAATATGGCATGAAACCTGATGCAGTTGCTCGGCCAT CTTTTCGTCCCCGTACTCGCTAGCCTTTTCCGGTGCATCCGCTGAACTCA CGTCCCTCACTGAACACGAAAACTCTTCTCCTCCTCTCGAACCATTCAGC CTCGTATGTATGTCGCGTTTTTGTCATGACCCCAAATCGTTGACGGGAGG TGCTGAACCCCGGCCCGCTTAGCCTTTTGAACAGTACCTCCTCGAGTGCT AATAACCTCGGTCTTCATCGTGACGACAATCTTTGTCTCGAACTGTGCCC GCCTGGTTGCTCGCTTTCGCTTACAAATTCGGCAAAACCCGTGATTCTCG ACTCGTTAGGAAGCTTAGACGTGTGCGCACCAACAGCAGTAGCATTTCCC TCTGCCTTTATCCCCTACCGCCCATTTGTCGGTGCCCTTCCCGCCACGTG CAGGGCTTCGAACCTGGGGAGCACGCAACGTCCCGCGGATTGGGACATTT TGTGCCCACGAGAGGTAGATTGCGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1799:12892..14616+

>mRNA_L-elsbetiae_contig1799.5147.1 ID=mRNA_L-elsbetiae_contig1799.5147.1|Name=mRNA_L-elsbetiae_contig1799.5147.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=996bp|location=Sequence derived from alignment at L-elsbetiae_contig1799:12892..14616+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCCCTGTTGAGGCATGGTGCGGACGTTAACTCCCAGGACAACGACCG
ACAAACGCCGTTGCACATTGCAGCAGCCGGAACGCAAGCAGAGGTGGAAA
TGGTGGAGTGTCTGTTGAGGTCAAGTGCGGACGAGACTATCCTCAACGAC
CAAGGCAAAGCAGCCGCGGACCTGGTCGGTGGCGAGCACGTGCGCGAGCT
GCTGGCGAATGCTCTGGCCGACAGAGCATGGCGTCGCCGGGGCTACCTAG
TCCTGTGCCGTGCTCGCCTCGACAGGGTGCAGCTGATGCAGGAGAGCAAC
AGCAGTACAACTGCCAATGTGGCATGTAGCATTGCCAGTGATGCTACACT
AGAGAGGACACAAGCAAGTGGTTGCGCTGAGACAGCAGTAGATAGCGCTG
TGAACGAGCGTACAGGCGGCGACTGGGTGGGTGTGTTGGTGAAAGTGCTG
GGAGTGCAGGAGGAGGGCATCTTTCGGACGATCGTGGAGTATCTTTGAAT
GGCCCTGTTGAGGCATGGTGCGGACGTTAACTCCCAGGACAACGACCGAC
AAACGCCGTTGCACATTGCAGCAGCCGGAACGCAAGCAGAGGTGGAAATG
GTGGAGTGTCTGTTGAGGTCAAGTGCGGACGAGACTATCCTCAACGACCA
AGGCAAAGCAGCCGCGGACCTGGTCGGTGGCGAGCACGTGCGCGAGCTGC
TGGCGAATGCTCTGGCCGACAGAGCATGGCGTCGCCGGGGCTACCTAGTC
CTGTGCCGTGCTCGCCTCGACAGGGTGCAGCTGATGCAGGAGAGCAACAG
CAGTACAACTGCCAATGTGGCATGTAGCATTGCCAGTGATGCTACACTAG
AGAGGACACAAGCAAGTGGTTGCGCTGAGACAGCAGTAGATAGCGCTGTG
AACGAGCGTACAGGCGGCGACTGGGTGGGTGTGTTGGTGAAAGTGCTGGG
AGTGCAGGAGGAGGGCATCTTTCGGACGATCGTGGAGTATCTTTGA
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