mRNA_L-elsbetiae_contig1799.5147.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1799.5147.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE) HSP 1 Score: 121 bits (303), Expect = 2.300e-28 Identity = 75/152 (49.34%), Postives = 94/152 (61.84%), Query Frame = 1 Query: 301 AGTQAEVEMVECLLRSSADETILNDQGKAAADLVGG------------EHVRELLANALADRAWRRRGYLVLCRARLDRVQLMQESNSSTTANVACSIASDATLERTQASGCAETAVDSAVNERTGGDWVGVLVKVLGVQEEGIFRTIVEYL 720 AG Q E+V LLR+ ADETI N QG A D++G E VRELLANA ADRAWRRRGYL++CRA+ DRV + ++ + NVA S A + R + A +S V+E TGG+W V+ KV+ +QEEGIFRTIVEYL Sbjct: 254 AGRQGAAEVVNSLLRAGADETIANVQGNKAVDMIGEDVEEEDRLTEDVERVRELLANAPADRAWRRRGYLIMCRAQPDRVPERRMTSGTHYTNVARRTRSRAKMARARG-----IAGESTVDESTGGNWAVVVSKVISLQEEGIFRTIVEYL 400
BLAST of mRNA_L-elsbetiae_contig1799.5147.1 vs. uniprot
Match: D7G137_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G137_ECTSI) HSP 1 Score: 99.4 bits (246), Expect = 2.140e-20 Identity = 123/250 (49.20%), Postives = 142/250 (56.80%), Query Frame = 1 Query: 13 VEILSAVIEHGADVNAAETERQTTPLHCAAFESGAQAIDILVGAGANTKVRNYKGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGT---QAEVEMVECLLRSSADETILNDQGKAAADLVG-----------GEHVRELLANALADRAWRRRGYLVLCRARLDRVQLMQESNSSTTANVACSIASDATLERTQASGCAETAVDSAVNERTGGDWVGVLVKVLGVQEEGIFRTIVEYL 720 VEIL +I+HG +VN A T LH AA + A AID+LVGAGA+ + RN GS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA + V++V LLR ADETI+ QGK AAD +G E R LL A ADRAWRRRG LVLC A DR+QL GGD G++ +VLG++E G+FRTIV YL Sbjct: 183 VEILRMLIDHGMEVNLAAAFG--TALHWAAKANRANAIDVLVGAGADIQARNMSGSRPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKVGQRRGSVQVVGLLLRWGADETIVCKQGKTAADRIGTRRFPSTEPGDDERARSLLTRAPADRAWRRRGLLVLCHAYPDRLQL-------------------------------------------GGDLAGLVDRVLGLEEVGVFRTIVLYL 387
BLAST of mRNA_L-elsbetiae_contig1799.5147.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI) HSP 1 Score: 89.4 bits (220), Expect = 1.030e-16 Identity = 65/155 (41.94%), Postives = 83/155 (53.55%), Query Frame = 1 Query: 301 AGTQAEVEMVECLLRSSADETILNDQGKAAADLVG----------GEHV---RELLANALADRAWRRRGYLVLCRARLDRVQLMQESNSSTTANVACSIASDATLERTQA--SGCAETAVDSAVNERTGGDWVGVLVKVLGVQEEGIFRTIVEYL 720 AG Q E+V+ LLR ADET + G+ AD VG G V ELLANA ADRAWRRRG LVLCRA L R +L QE T ++ S A L R+ A +GC + TG +W +V+ ++EEGIFR++V +L Sbjct: 272 AGRQGSAELVDLLLRRGADETTPDRNGQQPADRVGHCMELGDVLLGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQEDGGDTRGGLSRRTRSRAKLARSDAVGAGCRRGTPEGG----TGDEWRSASKRVVELEEEGIFRSVVGFL 422
BLAST of mRNA_L-elsbetiae_contig1799.5147.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI) HSP 1 Score: 86.3 bits (212), Expect = 9.690e-16 Identity = 80/255 (31.37%), Postives = 105/255 (41.18%), Query Frame = 1 Query: 7 GHVEILSAVIEHGADVNAAETERQTTPLHCAAFESGAQAIDILVGAGANTKVRNYKGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----AGTQAEVEMVECLLRSSADETILNDQGKAAADLVGG------------EHVRELLANALADRAWRRRGYLVLCRARLDRVQLMQESNSSTTANVACSIASDATLERTQASGCAETAVDSAVNERTGGDWVGVLVKVLGVQEEGIFRTIVEYL 720 GHV+ + +IEHGADV+A LH A + +A+D+L+ AGAN + + G AG Q VE+V+ LLR ADET + G AAD +G E VR+LLANA ADRAWRRR LVLCRAR D++QL + + R +A +VLG+ EEGIFRTIV ++ Sbjct: 171 GHVDFIRTLIEHGADVDATNYGG-VAALHHATANNKVEAMDVLLRAGANARSMSESGHTVLHMAAITRTRTEAATLAVLLKHGADVNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDRIPEEFEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQLSSDR-----------------IARLEA-------------------------RVLGLVEEGIFRTIVRFI 382
BLAST of mRNA_L-elsbetiae_contig1799.5147.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI) HSP 1 Score: 81.6 bits (200), Expect = 5.390e-14 Identity = 64/194 (32.99%), Postives = 90/194 (46.39%), Query Frame = 1 Query: 19 ILSAVIEHGADVNAAETERQT---TPLHCAAFESGAQAIDILVGAGANTKVRNYKGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--AGTQAEVEMVECLLRSSADETILNDQGKAAADLVGG--------------EHVRELLANALADRAWRRRGYLVLCRARLDRVQLMQESNSSTTAN 543 +L A+++HG DVN R+T T LH AA + AID+LV AGA+ +V + AG Q +V+ LLR ADET LN G+ AA++VG E VR+LL NA DRAWRRRG+LVLCRA + + ++ ++S+ ++N Sbjct: 122 VLRAILQHGVDVN-----RRTDGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACINHCHEAALALYKHGSNIEARDIRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRAFWIKARRLRAASSNASSN 310
BLAST of mRNA_L-elsbetiae_contig1799.5147.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE) HSP 1 Score: 80.1 bits (196), Expect = 1.960e-13 Identity = 65/190 (34.21%), Postives = 87/190 (45.79%), Query Frame = 1 Query: 19 ILSAVIEHGADVNAAETERQT---TPLHCAAFESGAQAIDILVGAGANTKVRNYKGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--AGTQAEVEMVECLLRSSADETILNDQGKAAADLVGG--------------EHVRELLANALADRAWRRRGYLVLCRARLDRVQLMQESNSS 531 +L A+++HG DVN R+T T LH AA + AID+LV AGA+ +V + AG Q +V+ LLR ADET LN G+ AA++VG E VR+LL NA ADRAWRRRG LVLCRA + + ++ ++SS Sbjct: 171 VLRAILQHGVDVN-----RRTDGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACSNHCHEAALALFKHGANIEARDMRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRAFWIKSRRLRAASSS 355
BLAST of mRNA_L-elsbetiae_contig1799.5147.1 vs. uniprot
Match: A0A6H5JMJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMJ6_9PHAE) HSP 1 Score: 74.7 bits (182), Expect = 1.200e-12 Identity = 94/174 (54.02%), Postives = 112/174 (64.37%), Query Frame = 1 Query: 22 LSAVIEHGADVNAAETERQTTPLHCAAFESGAQAIDILVGAGANTKVRNYKGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA--GTQAEVEMVECLLRSSADETILNDQGKAAADLVGGE------------HVRELLANALADRAWRRRGYLVLCRARLDR 501 +SA IE GA+V+AA+ +T P H AA + + ID+LV XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A G + + E+V+ LLRS ADETIL+ +G+AA D++ E VR+LL NA ADRAW RR YLVLCR DR Sbjct: 1 MSAAIERGAEVDAADAVERTPPHH-AALLNNVEEIDVLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSATAVAGFEGDTEVVDSLLRSGADETILDSEGRAAVDMISWEVAGLHLSGEQDDRVRDLLVNAQADRAWHRRRYLVLCRTHPDR 173
BLAST of mRNA_L-elsbetiae_contig1799.5147.1 vs. uniprot
Match: D7G1U1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U1_ECTSI) HSP 1 Score: 76.6 bits (187), Expect = 2.320e-12 Identity = 55/144 (38.19%), Postives = 68/144 (47.22%), Query Frame = 1 Query: 322 EMVECLLRSSADETILNDQGKAAADLVG-----------GEHVRELLANALADRAWRRRGYLVLCRARLDRVQLMQESNSSTTANVACSIASDATLERTQASGCAETAVDSAVNERTGGDWVGVLVKVLGVQEEGIFRTIVEYL 720 ++V+ LLR ADETI++ QG+ AAD +G E R LLA A ADRAWRRRG LVLCRA DR+QL GGD G++ V G++E G+FRTIV YL Sbjct: 291 QVVDLLLRWGADETIVSKQGETAADSIGTRRCHRTDPEDDERARSLLARAPADRAWRRRGLLVLCRAHPDRLQL-------------------------------------------GGDLAGLVAGVGGLEEVGVFRTIVLYL 391
BLAST of mRNA_L-elsbetiae_contig1799.5147.1 vs. uniprot
Match: D7G981_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G981_ECTSI) HSP 1 Score: 75.1 bits (183), Expect = 8.130e-12 Identity = 60/153 (39.22%), Postives = 84/153 (54.90%), Query Frame = 1 Query: 301 AGTQAEVEMVECLLRSSADETILNDQGKAAADLVGG------------EHVRELLANALADRAWRRRGYLVLCRARLDRVQLMQESNSSTTANVACSIASDATL-ERTQASGCAETAVDSAVNERTGGDWVGVLVKVLGVQEEGIFRTIVEYL 720 AG + VE+V+ LLR +ADET + G ++VG + V +LL A DRAWRRRG LVLCRA +R+ L Q ++ + V S L ER Q +G + +A + RT +W ++ +VLG+ +EGIFRTIV YL Sbjct: 250 AGDEGAVEVVDLLLRWNADETDDDAYGHTPGNIVGCMTPETDSMFVNVQRVWKLLQYAPQDRAWRRRGMLVLCRAHPERLGLRQNASHVQESTVLRVTRSRTKLVEREQVAG--GSGEGAAADGRTAREWSNMVYRVLGL-DEGIFRTIVGYL 399
BLAST of mRNA_L-elsbetiae_contig1799.5147.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE) HSP 1 Score: 69.3 bits (168), Expect = 1.080e-9 Identity = 77/252 (30.56%), Postives = 103/252 (40.87%), Query Frame = 1 Query: 40 HGADVNAAETERQTTPLHCAAFESGAQAIDILVGAGANTKVR-NYKGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTQAEVEMVECLLRSSADETILNDQGKAAADLV------------GGEHVRELLANALADRAWRRRGYLVLCRARLD--RVQLMQESNSSTTANVACSIASDATLERTQASGCAETAVDSAVNERTGGDWVGVLVKVLG-------VQEEG---IFRTIVEYL 720 HG DVNA + T L A+ A AID+L AGAN + + N AG+ EMV+ LLR ADET +++ G AAD+V + VR+LLA A ADRAWRRRG+L+L RA RVQ ++ + A VA +RT++ S R DW GV+ ++G + +G IF IV YL Sbjct: 546 HGGDVNA-KVNNGITALRVASAFDKAPAIDVLTEAGANIEAQANGSTPLHVASQEGRLAAGIALLRHGASVGKKNAAAQTPLHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAAGVA---------KRTRS---------SEEPSRAEIDWAGVVSMLMGDGVDPISLMGDGANLIFEKIVGYL 778 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1799.5147.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1799.5147.1 >prot_L-elsbetiae_contig1799.5147.1 ID=prot_L-elsbetiae_contig1799.5147.1|Name=mRNA_L-elsbetiae_contig1799.5147.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=166bp MALLRHGADVNSQDNDRQTPLHIAAAGTQAEVEMVECLLRSSADETILNDback to top mRNA from alignment at L-elsbetiae_contig1799:12892..14616+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1799.5147.1 ID=mRNA_L-elsbetiae_contig1799.5147.1|Name=mRNA_L-elsbetiae_contig1799.5147.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1725bp|location=Sequence derived from alignment at L-elsbetiae_contig1799:12892..14616+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1799:12892..14616+ >mRNA_L-elsbetiae_contig1799.5147.1 ID=mRNA_L-elsbetiae_contig1799.5147.1|Name=mRNA_L-elsbetiae_contig1799.5147.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=996bp|location=Sequence derived from alignment at L-elsbetiae_contig1799:12892..14616+ (Laminarionema elsbetiae ELsaHSoW15)back to top |