|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1568 |
| Cds size | 1566 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815746.4362495-CDS-L-elsbetiae_contig1791:20994..21423 | 1622815746.4362495-CDS-L-elsbetiae_contig1791:20994..21423 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1791 20995..21423 - |
| 1691683075.832006-CDS-L-elsbetiae_contig1791:20994..21423 | 1691683075.832006-CDS-L-elsbetiae_contig1791:20994..21423 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1791 20995..21423 - |
| 1622815746.4489133-CDS-L-elsbetiae_contig1791:21877..23014 | 1622815746.4489133-CDS-L-elsbetiae_contig1791:21877..23014 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1791 21878..23014 - |
| 1691683075.8409288-CDS-L-elsbetiae_contig1791:21877..23014 | 1691683075.8409288-CDS-L-elsbetiae_contig1791:21877..23014 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1791 21878..23014 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1791.5118.1 >prot_L-elsbetiae_contig1791.5118.1 ID=prot_L-elsbetiae_contig1791.5118.1|Name=mRNA_L-elsbetiae_contig1791.5118.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=522bp
ALDHGRVAAGAGKSLAKKRDAEKVRRAAAGTGASGQVGGAKKQNIVTPRA
LARIQRKAKKKKAADNLRQPDSASKTGAATSDDVGGGGGSAAAAAAAAAA
ALDHGRVAAGAGKSLAKKRDAEKVRRAAAGMGAAGQVGGATEENPGGREE
DSNPDHREDDGKAASPGSTEMPRKETPSMAAVVNGSVSSGPLRLGAPASS
VAPTATAMLAAGAPCDGAAASGGPDTVAPEAFIASDEHGNELPAIEDREE
MPNKKRAADSLRQPDSASKTGAATSVDVSAGADAGAGASTPLMVKEGPAS
VQDGAVEGYKDKTEVPNDTSLVEPTRPAAATGTSPAAYAEATGARSAARE
ERREDGKRKGEAKEKVPIAHGTSASAPDEVTATAEQASRARLGEAVRESG
TGRSGAARGRAGQVSAVIQAPPAVRENARTAGAKGDGARLLVNGVRVTAT
PLSAAAGSSPGARTRRSASRANIDGDKDGSARTPGWSGEQFRVPRPPGVS
RPPPRSLAQPSTTSGQHPSRAR back to topmRNA from alignment at L-elsbetiae_contig1791:20993..23014- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig1791.5118.1 ID=mRNA_L-elsbetiae_contig1791.5118.1|Name=mRNA_L-elsbetiae_contig1791.5118.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2022bp|location=Sequence derived from alignment at L-elsbetiae_contig1791:20993..23014- (Laminarionema elsbetiae ELsaHSoW15)
GCTCTCGATCATGGGCGGGTCGCTGCGGGGGCCGGAAAGAGTCTAGCGAA
GAAGCGGGACGCGGAAAAAGTGAGGCGTGCTGCCGCCGGAACGGGAGCAT
CCGGGCAGGTGGGCGGCGCGAAAAAACAAAACATTGTGACCCCAAGGGCA
CTGGCCAGGATACAAAGGAAGGCGAAGAAGAAGAAGGCTGCCGACAACCT
TCGACAGCCAGACTCTGCCTCGAAAACAGGAGCTGCCACTAGTGATGATG
TTGGTGGTGGTGGTGGTAGTGCTGCTGCTGCTGCTGCGGCGGCGGCGGCG
GCTCTCGATCATGGGCGGGTCGCTGCGGGGGCCGGAAAGAGTCTAGCGAA
GAAGCGGGACGCGGAAAAAGTGAGGCGCGCTGCCGCCGGAATGGGAGCAG
CCGGGCAGGTGGGCGGCGCGACGGAGGAGAATCCGGGGGGAAGGGAGGAG
GACTCGAACCCGGACCATCGCGAAGACGACGGGAAAGCTGCGTCGCCCGG
GTCGACGGAGATGCCTCGCAAGGAGACGCCGAGCATGGCGGCAGTGGTGA
ACGGCAGCGTCTCATCCGGACCTCTTCGCTTGGGGGCACCAGCTTCGAGC
GTGGCACCCACGGCGACCGCGATGCTTGCCGCCGGCGCTCCTTGCGACGG
TGCGGCGGCCTCCGGAGGCCCCGATACTGTCGCTCCCGAGGCTTTCATCG
CTTCCGACGAACACGGAAACGAGCTGCCTGCGATCGAGGACCGCGAGGAG
ATGCCGAACAAGAAGAGGGCTGCCGACAGCCTTCGACAGCCAGACTCCGC
CTCGAAAACAGGAGCTGCCACTAGTGTTGATGTTAGTGCTGGTGCTGATG
CTGGTGCTGGTGCCAGCACCCCTCTGATGGTGAAGGAAGGGCCTGCGTCC
GTTCAGGACGGTGCTGTCGAGGGGTACAAGGATAAGACGGAAGTGCCAAA
CGACACCTCGCTGGTGGAGCCGACACGACCAGCAGCAGCGACAGGAACGT
CGCCGGCTGCGTACGCAGAGGCGACCGGGGCTCGGTCGGCAGCGAGGGAG
GAGAGACGAGAGGACGGCAAGAGGAAGGGAGAGGCGAAGGAGAAGGTGCC
AATTGCGCATGGAACCTCCGCGAGCGCACCAGACGAGGTCAGTCGGGCAG
AGAAACGACATATTTTGACAGTATGTTGTTGTGGGGAAACTGCGGGGGCA
CAAGTAATGTAGTTTGTCACTCGCAGCAAATTCCCTCGTGGCTGTAAACC
CAACCAAGCTGCACGCCCTCCCGGGCTGACCAAGTTGTGGGGGCTGTGTT
GATATACCTTTGGCTTGAGGGTTGCCGATCGTGTCTAACCCACAGAAAAC
AAGGAAGTAAGGGCAGGAGGGTTTTGTCTACATTCACTTTTCCCGGTAGC
TCACCTTAAGCTATTTCTTCGTATGTCAGATGAATGTCAGAGCTGTTTTT
ATTTTGTCGGGTGTCAACGCCGTGAAGCCGAGAAGACAGAGATCATGGGG
AGTATGTGTTCAACGTTTTCACGAAAAATACATATTTTCTTCTCTCCCTT
TCTGCTTTTCTCTGCCAACACAAACTTGGCGTTATTATCAGGTGACTGCG
ACGGCTGAGCAGGCTAGCCGCGCGCGGTTGGGCGAGGCTGTACGAGAGAG
CGGGACTGGAAGGAGCGGGGCTGCACGAGGCAGGGCGGGGCAAGTTTCAG
CCGTCATCCAAGCACCACCAGCTGTGAGGGAGAATGCGCGCACTGCAGGC
GCGAAGGGCGATGGGGCACGATTGCTGGTGAACGGGGTGAGGGTTACGGC
AACGCCGCTCTCCGCGGCGGCGGGTTCCAGCCCTGGTGCACGAACCAGAC
GATCCGCTTCCCGCGCCAACATCGATGGGGACAAAGATGGCTCGGCAAGG
ACTCCCGGCTGGAGTGGAGAGCAGTTTCGAGTTCCCCGGCCGCCCGGTGT
CTCCCGTCCTCCCCCTCGCTCCCTCGCTCAACCATCGACAACCAGCGGTC
AGCATCCATCTCGAGCTCGTGG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig1791:20993..23014- >mRNA_L-elsbetiae_contig1791.5118.1 ID=mRNA_L-elsbetiae_contig1791.5118.1|Name=mRNA_L-elsbetiae_contig1791.5118.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3132bp|location=Sequence derived from alignment at L-elsbetiae_contig1791:20993..23014- (Laminarionema elsbetiae ELsaHSoW15)
GCTCTCGATCATGGGCGGGTCGCTGCGGGGGCCGGAAAGAGTCTAGCGAA
GAAGCGGGACGCGGAAAAAGTGAGGCGTGCTGCCGCCGGAACGGGAGCAT
CCGGGCAGGTGGGCGGCGCGAAAAAACAAAACATTGTGACCCCAAGGGCA
CTGGCCAGGATACAAAGGAAGGCGAAGAAGAAGAAGGCTGCCGACAACCT
TCGACAGCCAGACTCTGCCTCGAAAACAGGAGCTGCCACTAGTGATGATG
TTGGTGGTGGTGGTGGTAGTGCTGCTGCTGCTGCTGCGGCGGCGGCGGCG
GCTCTCGATCATGGGCGGGTCGCTGCGGGGGCCGGAAAGAGTCTAGCGAA
GAAGCGGGACGCGGAAAAAGTGAGGCGCGCTGCCGCCGGAATGGGAGCAG
CCGGGCAGGTGGGCGGCGCGACGGAGGAGAATCCGGGGGGAAGGGAGGAG
GACTCGAACCCGGACCATCGCGAAGACGACGGGAAAGCTGCGTCGCCCGG
GTCGACGGAGATGCCTCGCAAGGAGACGCCGAGCATGGCGGCAGTGGTGA
ACGGCAGCGTCTCATCCGGACCTCTTCGCTTGGGGGCACCAGCTTCGAGC
GTGGCACCCACGGCGACCGCGATGCTTGCCGCCGGCGCTCCTTGCGACGG
TGCGGCGGCCTCCGGAGGCCCCGATACTGTCGCTCCCGAGGCTTTCATCG
CTTCCGACGAACACGGAAACGAGCTGCCTGCGATCGAGGACCGCGAGGAG
ATGCCGAACAAGAAGAGGGCTGCCGACAGCCTTCGACAGCCAGACTCCGC
CTCGAAAACAGGAGCTGCCACTAGTGTTGATGTTAGTGCTGGTGCTGATG
CTGGTGCTGGTGCCAGCACCCCTCTGATGGTGAAGGAAGGGCCTGCGTCC
GTTCAGGACGGTGCTGTCGAGGGGTACAAGGATAAGACGGAAGTGCCAAA
CGACACCTCGCTGGTGGAGCCGACACGACCAGCAGCAGCGACAGGAACGT
CGCCGGCTGCGTACGCAGAGGCGACCGGGGCTCGGTCGGCAGCGAGGGAG
GAGAGACGAGAGGACGGCAAGAGGAAGGGAGAGGCGAAGGAGAAGGTGCC
AATTGCGCATGGAACCTCCGCGAGCGCACCAGACGAGGCTCTCGATCATG
GGCGGGTCGCTGCGGGGGCCGGAAAGAGTCTAGCGAAGAAGCGGGACGCG
GAAAAAGTGAGGCGTGCTGCCGCCGGAACGGGAGCATCCGGGCAGGTGGG
CGGCGCGAAAAAACAAAACATTGTGACCCCAAGGGCACTGGCCAGGATAC
AAAGGAAGGCGAAGAAGAAGAAGGCTGCCGACAACCTTCGACAGCCAGAC
TCTGCCTCGAAAACAGGAGCTGCCACTAGTGATGATGTTGGTGGTGGTGG
TGGTAGTGCTGCTGCTGCTGCTGCGGCGGCGGCGGCGGCTCTCGATCATG
GGCGGGTCGCTGCGGGGGCCGGAAAGAGTCTAGCGAAGAAGCGGGACGCG
GAAAAAGTGAGGCGCGCTGCCGCCGGAATGGGAGCAGCCGGGCAGGTGGG
CGGCGCGACGGAGGAGAATCCGGGGGGAAGGGAGGAGGACTCGAACCCGG
ACCATCGCGAAGACGACGGGAAAGCTGCGTCGCCCGGGTCGACGGAGATG
CCTCGCAAGGAGACGCCGAGCATGGCGGCAGTGGTGAACGGCAGCGTCTC
ATCCGGACCTCTTCGCTTGGGGGCACCAGCTTCGAGCGTGGCACCCACGG
CGACCGCGATGCTTGCCGCCGGCGCTCCTTGCGACGGTGCGGCGGCCTCC
GGAGGCCCCGATACTGTCGCTCCCGAGGCTTTCATCGCTTCCGACGAACA
CGGAAACGAGCTGCCTGCGATCGAGGACCGCGAGGAGATGCCGAACAAGA
AGAGGGCTGCCGACAGCCTTCGACAGCCAGACTCCGCCTCGAAAACAGGA
GCTGCCACTAGTGTTGATGTTAGTGCTGGTGCTGATGCTGGTGCTGGTGC
CAGCACCCCTCTGATGGTGAAGGAAGGGCCTGCGTCCGTTCAGGACGGTG
CTGTCGAGGGGTACAAGGATAAGACGGAAGTGCCAAACGACACCTCGCTG
GTGGAGCCGACACGACCAGCAGCAGCGACAGGAACGTCGCCGGCTGCGTA
CGCAGAGGCGACCGGGGCTCGGTCGGCAGCGAGGGAGGAGAGACGAGAGG
ACGGCAAGAGGAAGGGAGAGGCGAAGGAGAAGGTGCCAATTGCGCATGGA
ACCTCCGCGAGCGCACCAGACGAGGTGACTGCGACGGCTGAGCAGGCTAG
CCGCGCGCGGTTGGGCGAGGCTGTACGAGAGAGCGGGACTGGAAGGAGCG
GGGCTGCACGAGGCAGGGCGGGGCAAGTTTCAGCCGTCATCCAAGCACCA
CCAGCTGTGAGGGAGAATGCGCGCACTGCAGGCGCGAAGGGCGATGGGGC
ACGATTGCTGGTGAACGGGGTGAGGGTTACGGCAACGCCGCTCTCCGCGG
CGGCGGGTTCCAGCCCTGGTGCACGAACCAGACGATCCGCTTCCCGCGCC
AACATCGATGGGGACAAAGATGGCTCGGCAAGGACTCCCGGCTGGAGTGG
AGAGCAGTTTCGAGTTCCCCGGCCGCCCGGTGTCTCCCGTCCTCCCCCTC
GCTCCCTCGCTCAACCATCGACAACCAGCGGTCAGCATCCATCTCGAGCT
CGTGTGACTGCGACGGCTGAGCAGGCTAGCCGCGCGCGGTTGGGCGAGGC
TGTACGAGAGAGCGGGACTGGAAGGAGCGGGGCTGCACGAGGCAGGGCGG
GGCAAGTTTCAGCCGTCATCCAAGCACCACCAGCTGTGAGGGAGAATGCG
CGCACTGCAGGCGCGAAGGGCGATGGGGCACGATTGCTGGTGAACGGGGT
GAGGGTTACGGCAACGCCGCTCTCCGCGGCGGCGGGTTCCAGCCCTGGTG
CACGAACCAGACGATCCGCTTCCCGCGCCAACATCGATGGGGACAAAGAT
GGCTCGGCAAGGACTCCCGGCTGGAGTGGAGAGCAGTTTCGAGTTCCCCG
GCCGCCCGGTGTCTCCCGTCCTCCCCCTCGCTCCCTCGCTCAACCATCGA
CAACCAGCGGTCAGCATCCATCTCGAGCTCGT back to top
|