mRNA_L-elsbetiae_contig17812.5075.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig17812.5075.1 vs. uniprot
Match: A0A6H5LAP0_9PHAE (TLDc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAP0_9PHAE) HSP 1 Score: 205 bits (521), Expect = 2.760e-58 Identity = 129/287 (44.95%), Postives = 168/287 (58.54%), Query Frame = 1 Query: 37 FTPVRWTLKEQKRVASYAVRAPPNSGPCFGEKDLRTNFKEGGGGTIQTASVYYSVNSAK-FLGLGGKEIVDIEVFGVCS----------DQNLAGNGPKLPGGAAFSKVTAGDVRLFGEVIAASLAEERAALQHAFKLMKEAEARVTAASHALQTVYGLDLDEANKKGFVVELNVRGTTMATLRSTLQACTESALAARFDEDKWPVLQTDCDEQGRRLIDCRPSVFSKVLDALRMRKRESWSLNKAEKETGRSTRGTAQQAVVVEERDRACFEEFVDMYFPGCQSFI 864 F P++W +K +A+ AV GPCFGE DL+ N+ G T+ T + Y V + FL L G+ ++DIE F VCS ++ AG G P T+ DV FG++IA SL E LQ A + A+AR TA + AL VYG D+ ++ VVEL+VRGT M TLRSTL+ C +SALAARFDE KWP + D D GRR+IDCRP+VFSKVLD LR+ KR +W+ G + +G + V ++ DR FEEFVDMYF GC+SFI Sbjct: 296 FPPMKWGVKNG--LAAKAVNQ--GCGPCFGECDLKVNWN-GNMSTVGTDNSTYDVPAGSHFLQLNGRHLLDIEAFRVCSKPTHTLPLAKQEHRAGEGTNTPTAPVR---TSDDVPTFGQLIADSLMEAEMVLQDAGIELALAKARTTACATALAAVYGPDVASGQQED-VVELSVRGTAMTTLRSTLRVCPDSALAARFDEGKWPAAKKDLDSDGRRMIDCRPAVFSKVLDVLRIAKRAAWA-------GGENLQGMKETRVTIKPGDRVAFEEFVDMYFKGCESFI 566
BLAST of mRNA_L-elsbetiae_contig17812.5075.1 vs. uniprot
Match: D7FIX7_ECTSI (BTB_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIX7_ECTSI) HSP 1 Score: 198 bits (503), Expect = 4.040e-56 Identity = 122/299 (40.80%), Postives = 175/299 (58.53%), Query Frame = 1 Query: 1 MLRDGSCAHPNIFTPVRWTLKEQKRVASYAVRAPPNSGPCFGE-KDLRTNFKEGGGGTIQTAS-VYYSVNSAKFLGLGGKEIVDIEVFGVCSDQNLAGNGPKLPGGAAFSKV-------TAGDVRLFGEVIAASLAEERAALQHAFKLMKEAEARVTAASHALQTVYGLDLDEANKKGFVVELNVRGTTMATLRSTLQACTESALAARFDEDKWPVLQTDCDEQGRRLIDCRPSVFSKVLDALRMRKRESWSLNKAEKETGRSTRGTAQQAVVVEERDRACFEEFVDMYFPGCQSFITD 870 ML+DG H ++ +W +K+ + ++YAV GPCFGE +DL + G ++T + Y++ + F L G +VD+E F V N + K A K TA DVR FG+++A SL EE LQ A + A+AR A + A+ VYG ++ + VVELNVRGT M TLRSTL+ C +SALAA F+E++WPV + D D GRR+IDC+PSVFSKVLD LR+ KR +W+ ++E+ R+ + + V ++ D A FEEFVDMYFP C++F+ + Sbjct: 224 MLKDGEGRHSGVYQSTKWGVKDGR--SAYAVYRGQGYGPCFGEGRDLHVVWN-GTESAVRTGNQTYHAPTGSPFPELNGCRLVDVETFRVGPKPNTPTSSTKQEDHAVEDKTGPGAPVKTADDVRSFGDLVADSLMEEEKLLQEAANELSLAKARTMACATAVAAVYGPEVATGTEDD-VVELNVRGTRMTTLRSTLRICPDSALAAWFNEEQWPVAEKDLDSNGRRIIDCKPSVFSKVLDVLRIAKRAAWA--RSEEGPVRNEKRRVKPRVTIKAGDCAAFEEFVDMYFPCCETFMME 516
BLAST of mRNA_L-elsbetiae_contig17812.5075.1 vs. uniprot
Match: D7G2H5_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2H5_ECTSI) HSP 1 Score: 194 bits (493), Expect = 2.120e-54 Identity = 132/306 (43.14%), Postives = 163/306 (53.27%), Query Frame = 1 Query: 1 MLRDGSCAHPNIFTPVRWTLKEQKRVASYAVRAPPNSGPCFGEKDLRTNFKEGGGGTIQTASVYYSVNSAK-FLGLGGKEIVDIEVFGVCS--------DQNLAGNGPKLPGGAAFSKVTA-------GDVRLFGEVIAASLAEERAALQHAFKLMKEAEARVTAASHALQTVYGLDLDEANKKGFVVELNVRGTTMATLRSTLQACTESALAARFDEDKWPVLQTDCDEQGRRLIDCRPSVFSKVLDALRMRKRESWSLNKAEKETGRSTRGTAQQAVVVEERDRACFEEFVDMYFPGCQSFITD 870 ML+D PN F PV+W ++ V A + GP FG DL NF T+Q Y V S F L G+ I +IEVF V S + L GP+ GA + T D FG IA +L EER AL A +++A ++ A+ AL VYG ++ VVEL+VRGT M TLRSTLQAC ESALAA F+EDKWP D DEQGRRLI+C P+VF KVLD LRMRKR +W+ S R A V V+ DR F+ FV+MYFPG ++FITD Sbjct: 253 MLKDSDMGGPNSFQPVKWGKRDNNGGCDVVVGA--SRGPYFGRTDLVVNFNNYFPVTLQAQPYSYDVPSGSTFPNLNGQTITEIEVFQVYSAAATTSSPSKRLKIQGPEDTHGAVSTSSTNTASREANSDAETFGNAIAGALMEERIALHQAEAELEQAHSKAAASGDALAAVYGPEVARG-AIDTVVELSVRGTRMTTLRSTLQACRESALAALFNEDKWPPTDKDVDEQGRRLINCSPAVFQKVLDVLRMRKRAAWAA---------SDRELAH--VRVDAADRPAFDSFVNMYFPGFENFITD 544
BLAST of mRNA_L-elsbetiae_contig17812.5075.1 vs. uniprot
Match: A0A6H5L232_9PHAE (TLDc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L232_9PHAE) HSP 1 Score: 173 bits (439), Expect = 1.080e-46 Identity = 120/291 (41.24%), Postives = 152/291 (52.23%), Query Frame = 1 Query: 1 MLRDGSCAHPNIFTPVRWTLKEQKRVASYAVRAPPNSGPCFGEKDLRTNFKEGGGGTIQTASVYYSVNSAK-FLGLGGKEIVDIEVFGVCSDQNLAGNGPKLPGGAAFSKVTAGDVRLFGEVIAASLAEERAALQHAFKLMKEAEARVTAASHALQTVYGLDLDEANKKGFVVELNVRGTTMATLRSTLQACTESALAARFDEDKWPVLQTDCDEQGRRLIDCRPSVFSKVLDALRMRKRESWSLNKAEKETGRSTRGTAQQAVVVEERDRACFEEFVDMYFPGCQSFITD 870 ML+D PN F PV+W+ ++ Y V + GP FG DL NF T+Q Y V S F L G+ I +IEVF V N+ IA +L EER AL A ++ A ++ + AL VYG ++ VVEL+VRGT M TLRSTL+AC ESALAA F+EDKWP D DEQGRRLI+C P+VF KVLD LRMRKR +W+ S R +A V V+ DR F+ FV+M+FPG ++FITD Sbjct: 275 MLKDSDMGGPNSFQPVKWSKRDNN--GGYDVVVGASRGPFFGRTDLVVNFTYVPV-TLQAQPYSYDVPSVPAFPNLNGQTITEIEVFQV----NIC------------------------NAIAGALMEERIALYQAEAELEHAHSKAAVSGRALAAVYGPEVARG-AIDTVVELSVRGTRMTTLRSTLRACRESALAALFNEDKWPATDKDVDEQGRRLINCSPAVFQKVLDVLRMRKRAAWAA---------SDRESAH--VRVDAADRPAFDSFVNMFFPGFENFITD 522
BLAST of mRNA_L-elsbetiae_contig17812.5075.1 vs. uniprot
Match: D7FIV0_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV0_ECTSI) HSP 1 Score: 166 bits (420), Expect = 6.100e-44 Identity = 114/251 (45.42%), Postives = 144/251 (57.37%), Query Frame = 1 Query: 169 TIQTASVYYSVNSA-KFLGLGGKEIVDIEVFGVCSDQNLAGNGPKLPGG----AAFSKVTA-------GDVRLFGEVIAASLAEERAALQHAFKLMKEAEARVTAASHALQTVYGLDLDEANKKGFVVELNVRGTT----MATLRSTLQACTESALAARFDEDKWPVLQTDCDEQGRRLI-DCRPSVFSKVLDALRMRKRESWSLNKAEKETGRSTRGTAQQAVVVEERDRACFEEFVDMYFPGCQSFITD 870 T+ + Y+V +F+ LGG+ I D+EVF V P G AA+ + +A DV FG IA SL +ERAAL A + + +A A+ AL VYG A K +VEL+VRG+ M TL STLQAC ESALAARFDE KWPV + D D GRR++ DC PSVFSKVLD LRM+KRE+W+ G + A V +++ DRA FEEFV+MYFPGC+SFI D Sbjct: 287 TLVAGNQVYAVPPGFQFIRLGGRAIADVEVFRVRQTMGTLPTTPPTVTGLIDCAAYFEASAMSAEEHENDVYRFGTSIAGSLKDERAALHTAQRELVQANTMAAASLKALAAVYGPHT-AAGVKDPIVELSVRGSRTTERMTTLLSTLQACPESALAARFDEAKWPVTEKDKDAHGRRVMKDCSPSVFSKVLDVLRMKKREAWA--------GDDGKMGAAVLVAIKDADRAPFEEFVNMYFPGCESFIMD 528
BLAST of mRNA_L-elsbetiae_contig17812.5075.1 vs. uniprot
Match: D7FIX8_ECTSI (BTB_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIX8_ECTSI) HSP 1 Score: 149 bits (376), Expect = 3.800e-41 Identity = 85/163 (52.15%), Postives = 105/163 (64.42%), Query Frame = 1 Query: 382 EERAALQHAFKLMKEAEARVTAASHALQTVYGLDLDEANKKGFVVELNVRGTTMATLRSTLQACTESALAARFDEDKWPVLQTDCDEQGRRLIDCRPSVFSKVLDALRMRKRESWSLNKAEKETGRSTRGTAQQAVVVEERDRACFEEFVDMYFPGCQSFITD 870 E LQ A + A+AR TA + AL VYG D+ ++ VVEL+VRGT M TLRSTL+ C SALAARFDEDKWP + D D GRR+IDC+PSVFSKVLD LRM KR W+ ++ + + R V ++ DR FEEFVDMYF GC+SFI + Sbjct: 2 EAEMVLQEAGIELSPAKARTTACATALAAVYGPDVANGQEED-VVELSVRGTEMMTLRSTLRICPSSALAARFDEDKWPAAKKDVDSNGRRVIDCKPSVFSKVLDVLRMAKRVRWADDEKLEGMNETPR------VTIKAGDRFAFEEFVDMYFKGCESFIME 157
BLAST of mRNA_L-elsbetiae_contig17812.5075.1 vs. uniprot
Match: A0A6H5JD55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD55_9PHAE) HSP 1 Score: 152 bits (383), Expect = 4.110e-39 Identity = 106/273 (38.83%), Postives = 151/273 (55.31%), Query Frame = 1 Query: 97 APPNSGPCFGEKDLRTNFKEGGGGTIQTASVYYSVNS-AKFLGLGGKEIVDIEVFGVC---SDQNLAGNGPK--------LPGGAAFSKVTAGDVRL---FGEVIAASLAEERAALQHAFKLMKEAEARVTAASHALQTVYGLDLDEANKKGFVVELNVRGTTMATLRSTLQACTESALAARFDEDKWPVLQTDCDEQGRRLIDCRPSVFSKVLDALRMRKRESWSLNKAEKETGRSTRGTAQQAVVVEERDRACFEEFVDMYFPGCQSFITD 870 A P +G C DLR +K G T+QT ++ V + ++ L L G+ +VDIE F +C L+ PK +P S++ +R+ FG +IA +L EE LQ A + AEAR TA + AL VYG D+ + ++ VVEL+V GT + + STL+ C S A +F ED+WP + D D+ GRR+IDC PSVFSKV+D LR SW+ ++E ++ R V ++ DRA FEEFVD+YF GC+S I + Sbjct: 201 AAPGNGMC----DLRVVWKVGAASTVQTKNLTQDVQAESRLLALNGRGVVDIETFRLCYCRPTDALSSAKPKHHFIGDIAVPTAPVRSRL----LRMSFPFGRLIADALMEE-IVLQEANNELAVAEARTTACATALVVVYGPDVAKGREEEDVVELSVCGTRVTRMCSTLRVCPGSTFATQFLEDRWPATKKDLDDNGRRVIDCEPSVFSKVMDILRA----SWARGDDDQEANKTPR------VTIKPCDRAEFEEFVDIYFKGCESLIME 454
BLAST of mRNA_L-elsbetiae_contig17812.5075.1 vs. uniprot
Match: A0A6H5JCR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCR8_9PHAE) HSP 1 Score: 149 bits (375), Expect = 1.420e-37 Identity = 108/231 (46.75%), Postives = 135/231 (58.44%), Query Frame = 1 Query: 214 FLGLGGKEIVDIEVFGVCSDQNLAGNGPKLPGGAAFSKVT-------AGDVRLFGEVIAASLAEERAALQHAFKLMKEAEARVTAASHALQTVYGLDLDEANKKGFVVELNVRGTT----MATLRSTLQACTESALAARFDEDKWPVLQTDCDEQGRRLI-DCRPSVFSKVLDALRMRKRESWSLNKAEKETGRSTRGTAQQAVVVEERDRACFEEFVDMYFPGCQSFITD 870 FL G+E+VDIEVF V +L G L AA+ K + DV FG IA SL +ERAAL A + + +A A+ AL VYG ++ A + VVEL+VRG M TL STLQAC ESALAARFDE KWPV + D GRR+I DC P VF+KVLD LRM+KRE+W+ + + R V ++ DRA FE+FV+MYFP C+SFI D Sbjct: 302 FLYHMGREVVDIEVFRVLP-TSLTVTG--LIDCAAYFKCSDMSAEEHENDVYRFGMSIAGSLRDERAALHTAQRELVKANTIAAASVEALAAVYGPNI-AAGVEDRVVELSVRGPRKTERMTTLLSTLQACPESALAARFDEAKWPVTDKEKDAHGRRVIKDCSPLVFAKVLDVLRMKKREAWA------DDDKKVRAAV--LVAIKAADRAPFEKFVNMYFPACESFIMD 520
BLAST of mRNA_L-elsbetiae_contig17812.5075.1 vs. uniprot
Match: D7G141_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G141_ECTSI) HSP 1 Score: 136 bits (343), Expect = 1.480e-32 Identity = 106/320 (33.12%), Postives = 152/320 (47.50%), Query Frame = 1 Query: 40 TPVRWTLKEQKRVASYAVRAPPNS----GPCFGEKDLRTNFKEG------GGGTIQTASVYYSVNS-AKFLGLGGKEIVDIEVFGV-----CSDQNLAGNGPKLPGGAAF--------------SKVTAGDVRLFGEVIAASLAEERAALQHAFKLMKEAEARVTAASHALQTVYGLDLDEAN-KKGFVVELNVRGTTMATLRSTLQACTESALAARFDEDKWPV------------LQTDCDEQGRRLIDCRPSVFSKVLDALRMRKRESWSLNKAEKETGRSTRGTAQQAVVVEERDRACFEEFVDMYFPGCQSFITD 870 T +W++KE + S A+ P + GP FG +D+ F E G T+ T +Y V+ + F+GL GKE+ +IE+F V Q++A P F ++ A FG +A L EE+ AL +A ++EA+ R A + AL VYG + A ++ VVEL+VRG ++ TLRSTL+AC +SA + PV L E RR +DC PS FSK+LD +RMRKR +W + + R G + V E DRACF+ V FP C+ F+ D Sbjct: 302 TAKKWSIKEGED--SCAIHWPETADVCAGPAFGLEDMCVTFSESEGQSGSSGCTLSTGGEFYDVDEDSPFVGLDGKEVAEIEIFRVDKTARVEHQDVAPVATTPPQSNIFPDKRKHFLHPDRSADEIEAAYALQFGSSLAELLMEEQMALAYAQTELEEAKKRAAATARALAIVYGPGVASARVEENAVVELSVRGMSVTTLRSTLEACPDSAFSTWLGAADRPVGCGDDGEANDEGLGGRTSEDCRRKVDCDPSCFSKILDVMRMRKRAAWVTDDQQGALIREAGGGHTVRIPVPESDRACFKNLVHTLFPECEDFVMD 619
BLAST of mRNA_L-elsbetiae_contig17812.5075.1 vs. uniprot
Match: A0A6H5JQU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQU4_9PHAE) HSP 1 Score: 136 bits (343), Expect = 1.900e-32 Identity = 99/255 (38.82%), Postives = 126/255 (49.41%), Query Frame = 1 Query: 112 GPCFGE-KDLRTNFKEGGGGTIQTASVYYSVN-SAKFLGLGGKEIVDIEVFGVCSDQNLAGNGPKLPGGAAFSKVTAGDVRLFGEVIAASLAEERAALQHAFKLMKEAEARVTAASHALQTVYGLDLDEANKKGFVVELNVRGTTMATLRSTLQACTESALAARFDEDKWPVLQTDCDEQGRRLIDCRPSVFSKVLDALRMRKRESWSLNKAEKETGRSTRGTAQQAVVVEERDRACFEEFVDMYFPGCQSFITD 870 GP FG DL+ N+ T +T + Y V + FL L G IVDIE F VC P +A +T +K T + AL VY D+ + F+ EL+VRGT M TLRSTL+ C +SALA RFDEDKWP + D D GRR+IDC+P+VFSKVLD LRM R SW+ ++ ++ R V ++ DR FEEFV M FPGC+S I D Sbjct: 191 GPTFGGGHDLKENWNRTKT-TPKTGNYTYDVPVGSPFLQLNGCPIVDIETFRVCPK-------PTNTSSSAKGNLTP------------------------YKTQWRRRHLTTTYATALAAVYCPDMAMGLEVDFM-ELSVRGTRMTTLRSTLRVCPDSALATRFDEDKWPAAKKDLDSNGRRVIDCKPAVFSKVLDVLRMATRASWAGSEKSQQVNEKPR------VTMKVGDRVAFEEFVGMNFPGCESCILD 406 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17812.5075.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig17812.5075.1 >prot_L-elsbetiae_contig17812.5075.1 ID=prot_L-elsbetiae_contig17812.5075.1|Name=mRNA_L-elsbetiae_contig17812.5075.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=290bp MLRDGSCAHPNIFTPVRWTLKEQKRVASYAVRAPPNSGPCFGEKDLRTNFback to top mRNA from alignment at L-elsbetiae_contig17812:1862..2731+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig17812.5075.1 ID=mRNA_L-elsbetiae_contig17812.5075.1|Name=mRNA_L-elsbetiae_contig17812.5075.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=870bp|location=Sequence derived from alignment at L-elsbetiae_contig17812:1862..2731+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig17812:1862..2731+ >mRNA_L-elsbetiae_contig17812.5075.1 ID=mRNA_L-elsbetiae_contig17812.5075.1|Name=mRNA_L-elsbetiae_contig17812.5075.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1740bp|location=Sequence derived from alignment at L-elsbetiae_contig17812:1862..2731+ (Laminarionema elsbetiae ELsaHSoW15)back to top |