mRNA_L-elsbetiae_contig1780.5072.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1780.5072.1 vs. uniprot
Match: A0A6H5JFJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFJ8_9PHAE) HSP 1 Score: 190 bits (483), Expect = 1.550e-54 Identity = 106/154 (68.83%), Postives = 121/154 (78.57%), Query Frame = 2 Query: 23 MEEDAALREVVKKALEGKGVLAQIRASLRAAVFTVVDEHERASGVHVPNPSALDVKHDVRGRLALQLVADFLEHWQLHQTLSILKLETDLAAGDLLPREQLESIVGSDYVAAAAAGNGETKSSGDKSAPVLHQLLAGGPAVSPGDGNGLPLGAS 484 M++DA LR+VVKKALEGKGVLAQIRASLRAAVFTVVDEHER +GVHVPNP+AL VKHD GRLALQ+VADFLEHW+LHQTLS+LKLETD+A D L E+L SIV + AA G GETK+ K +PV+ QLLA A NGLPLGA+ Sbjct: 1 MDDDADLRDVVKKALEGKGVLAQIRASLRAAVFTVVDEHERTAGVHVPNPAALVVKHDTVGRLALQVVADFLEHWELHQTLSVLKLETDMATEDFLSTEELGSIVAN----GAAVGKGETKTPDGKPSPVMLQLLAACRAAPRDRENGLPLGAA 150
BLAST of mRNA_L-elsbetiae_contig1780.5072.1 vs. uniprot
Match: D8LLY1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLY1_ECTSI) HSP 1 Score: 89.0 bits (219), Expect = 2.060e-17 Identity = 52/94 (55.32%), Postives = 64/94 (68.09%), Query Frame = 2 Query: 203 GRLALQLVADFLEHWQLHQTLSILKLETDLAAGDLLPREQLESIVGSDYVAAAAAGNGETKSSGDKSAPVLHQLLAGGPAVSPGDGNGLPLGAS 484 GRL+LQ+VADFLEHW+LHQTLS+LKLETD+A DLL E+L SIV + A G GE K+ K++PV+ QLLA A N PLGA+ Sbjct: 4 GRLSLQVVADFLEHWELHQTLSVLKLETDMATEDLLSTEELGSIVAN----GAVVGKGEMKTPEGKTSPVMLQLLAACRAAPRDKENEFPLGAA 93
BLAST of mRNA_L-elsbetiae_contig1780.5072.1 vs. uniprot
Match: D7FK22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK22_ECTSI) HSP 1 Score: 80.1 bits (196), Expect = 9.460e-17 Identity = 43/73 (58.90%), Postives = 54/73 (73.97%), Query Frame = 2 Query: 203 GRLALQLVADFLEHWQLHQTLSILKLETDLAAGDLLPREQLESIVGSDYVAAAAAGNGETKSSGDKSAPVLHQ 421 GRL+LQ+VADFLEHW+LHQTLS+LKLETD+A DLL E+L SIV + A G GE K+ K++PV+ Q Sbjct: 4 GRLSLQVVADFLEHWELHQTLSVLKLETDMATEDLLSTEELGSIVAN----GAVVGKGEMKTPEGKTSPVMLQ 72
BLAST of mRNA_L-elsbetiae_contig1780.5072.1 vs. uniprot
Match: A0A7S1CMI0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CMI0_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 7.440e-14 Identity = 56/142 (39.44%), Postives = 80/142 (56.34%), Query Frame = 2 Query: 41 LREVVKKALEGKGVLAQIRASLRAAVFTVVDEHERASGVHVPNPSALDVKHDVRGRLALQLVADFLEHWQLHQTLSILKLETDLAAGDLL--PREQLESIVGSDYVAAAAAGNGETKSSGDKSAPVLHQLLAGGPAVSPGDG 460 ++E V + LE GVL+ IRA LRAAV++ V+E ERA+GV++ NP + GR+ L LV +FLE + + TLS+ E A+ D + R +L+S +G +AA AAG GE +L Q+LA A G G Sbjct: 17 VKESVSRILEANGVLSTIRAHLRAAVYSAVEEQERAAGVYLENPLVKTLHESDSGRVMLALVREFLEFYNMEATLSVFLPE---ASADKVNAERARLQSELG---LAAPAAGEGERC--------LLSQVLARAQAAPAGAG 144
BLAST of mRNA_L-elsbetiae_contig1780.5072.1 vs. uniprot
Match: A0A2R5GRB5_9STRA (FGFR1 onco partner n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GRB5_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 1.160e-12 Identity = 41/100 (41.00%), Postives = 59/100 (59.00%), Query Frame = 2 Query: 41 LREVVKKALEGKGVLAQIRASLRAAVFTVVDEHERASGVHVPNPSALDVKHDVRGRLALQLVADFLEHWQLHQTLSILKLETDLAAGDLLPREQLESIVG 340 L+ +V + LE KGVL IRA LRAAVFT +DE ERA+GV++ N +K +L L L+ +F E ++L +TLS+ E + R+QL +G Sbjct: 23 LKHIVSRTLEAKGVLGTIRAQLRAAVFTALDEQERANGVYLENYRVQKIKSSPESKLLLALMHEFFEFYELDRTLSVFMPEATWTQAEYPGRQQLSRDLG 122
BLAST of mRNA_L-elsbetiae_contig1780.5072.1 vs. uniprot
Match: A0A7S2WGI0_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WGI0_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 3.010e-12 Identity = 41/100 (41.00%), Postives = 59/100 (59.00%), Query Frame = 2 Query: 41 LREVVKKALEGKGVLAQIRASLRAAVFTVVDEHERASGVHVPNPSALDVKHDVRGRLALQLVADFLEHWQLHQTLSILKLETDLAAGDLLPREQLESIVG 340 L+++V + LE KGVL IRA LRAAV T +DE ER +GV++ NP K G L L L+ ++ E + L +T+S+ E + + D R QL S +G Sbjct: 9 LKDIVARTLEAKGVLGTIRAQLRAAVHTALDEQERVNGVYLENPRLQLAKESEEGLLLLSLINEYFEFYSLDRTVSVFGPEANWSPDDYPGRPQLVSELG 108
BLAST of mRNA_L-elsbetiae_contig1780.5072.1 vs. uniprot
Match: A0A7S2WFJ2_9STRA (Hypothetical protein (Fragment) n=3 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WFJ2_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 3.640e-12 Identity = 41/100 (41.00%), Postives = 59/100 (59.00%), Query Frame = 2 Query: 41 LREVVKKALEGKGVLAQIRASLRAAVFTVVDEHERASGVHVPNPSALDVKHDVRGRLALQLVADFLEHWQLHQTLSILKLETDLAAGDLLPREQLESIVG 340 L+++V + LE KGVL IRA LRAAV T +DE ER +GV++ NP K G L L L+ ++ E + L +T+S+ E + + D R QL S +G Sbjct: 9 LKDIVARTLEAKGVLGTIRAQLRAAVHTALDEQERVNGVYLENPRLQLAKESEEGLLLLSLINEYFEFYSLDRTVSVFGPEANWSPDDYPGRPQLVSELG 108
BLAST of mRNA_L-elsbetiae_contig1780.5072.1 vs. uniprot
Match: A0A812ZNM4_9DINO (Cep43 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812ZNM4_9DINO) HSP 1 Score: 68.6 bits (166), Expect = 2.560e-10 Identity = 49/140 (35.00%), Postives = 73/140 (52.14%), Query Frame = 2 Query: 41 LREVVKKALEGKGVLAQIRASLRAAVFTVVDEHERASGVHVPNPSALDVKHDVRGRLALQLVADFLEHWQLHQTLSILKLE--TDLAAGDLLPREQLESIVGSD-------YVAAAAAGNGETKSSGDKSAPVLHQLLAG 433 ++ +V + LE GVLA IRA LRAAVFT +DE ER G+H N ++ D G + L L+ +FLE + L T ++L E +D A + R L+ +G + +AA G G + S G SA ++ +G Sbjct: 10 VKGMVAQTLENSGVLASIRAQLRAAVFTAIDEEERKQGIHGANTRFQELADDPAGPVMLSLLREFLEFYNLQHTSNVLASEASSDPTAATM-DRSMLQRHLGIEEPSARRPLLAALVEGGGSSVSEGTPSASPQWRMSSG 148
BLAST of mRNA_L-elsbetiae_contig1780.5072.1 vs. uniprot
Match: A0A6P8Z323_THRPL (FGFR1 oncogene partner-like n=1 Tax=Thrips palmi TaxID=161013 RepID=A0A6P8Z323_THRPL) HSP 1 Score: 63.9 bits (154), Expect = 9.480e-9 Identity = 38/94 (40.43%), Postives = 55/94 (58.51%), Query Frame = 2 Query: 20 NMEEDAALREVVKKALEGKGVLAQIRASLRAAVFTVVDEHERASGVHVPNPSALDVKHDVRGRLALQLVADFLEHWQLHQTLSILKLETDLAAG 301 ++EED LR++V K LE GVLA+IRA LRA+VF ++E E +G N + + + L L +V +FLE+ +L TLS+ ET G Sbjct: 2 SVEEDTELRDLVSKTLENNGVLAKIRAELRASVFLALEEQENKAGPF-ENKALKEYLKSPQAALGLCIVREFLEYLELDFTLSVYNTETSHGKG 94
BLAST of mRNA_L-elsbetiae_contig1780.5072.1 vs. uniprot
Match: UPI00143D773E (uncharacterized protein LOC117177707 isoform X1 n=3 Tax=Belonocnema kinseyi TaxID=2817044 RepID=UPI00143D773E) HSP 1 Score: 62.8 bits (151), Expect = 2.440e-8 Identity = 35/90 (38.89%), Postives = 53/90 (58.89%), Query Frame = 2 Query: 20 NMEEDAALREVVKKALEGKGVLAQIRASLRAAVFTVVDEHERASGVH-VPNPSALDVKHDVRGRLALQLVADFLEHWQLHQTLSILKLET 286 +MEED LR++V + LE GVLA++RA LRA+VF ++E E + N + G+L LV +FLE+++L T+S+ ET Sbjct: 6 SMEEDTELRDLVVQTLENNGVLAKVRAELRASVFLALEEQESVMNAEPLLNKTVKQYLESSEGKLLFSLVREFLEYFELDYTISVYDPET 95 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1780.5072.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1780.5072.1 >prot_L-elsbetiae_contig1780.5072.1 ID=prot_L-elsbetiae_contig1780.5072.1|Name=mRNA_L-elsbetiae_contig1780.5072.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=170bp MEEDAALREVVKKALEGKGVLAQIRASLRAAVFTVVDEHERASGVHVPNPback to top mRNA from alignment at L-elsbetiae_contig1780:19776..22931- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1780.5072.1 ID=mRNA_L-elsbetiae_contig1780.5072.1|Name=mRNA_L-elsbetiae_contig1780.5072.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3156bp|location=Sequence derived from alignment at L-elsbetiae_contig1780:19776..22931- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1780:19776..22931- >mRNA_L-elsbetiae_contig1780.5072.1 ID=mRNA_L-elsbetiae_contig1780.5072.1|Name=mRNA_L-elsbetiae_contig1780.5072.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1020bp|location=Sequence derived from alignment at L-elsbetiae_contig1780:19776..22931- (Laminarionema elsbetiae ELsaHSoW15)back to top |