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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1832 |
| Cds size | 1071 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815740.6037507-CDS-L-elsbetiae_contig1778:16717..16800 | 1622815740.6037507-CDS-L-elsbetiae_contig1778:16717..16800 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1778 16718..16800 + |
| 1691683072.0274496-CDS-L-elsbetiae_contig1778:16717..16800 | 1691683072.0274496-CDS-L-elsbetiae_contig1778:16717..16800 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1778 16718..16800 + |
| 1622815740.6155019-CDS-L-elsbetiae_contig1778:16812..17800 | 1622815740.6155019-CDS-L-elsbetiae_contig1778:16812..17800 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1778 16813..17800 + |
| 1691683072.0391238-CDS-L-elsbetiae_contig1778:16812..17800 | 1691683072.0391238-CDS-L-elsbetiae_contig1778:16812..17800 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1778 16813..17800 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815740.6255465-UTR-L-elsbetiae_contig1778:17800..18559 | 1622815740.6255465-UTR-L-elsbetiae_contig1778:17800..18559 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1778 17801..18559 + |
| 1691683072.0490787-UTR-L-elsbetiae_contig1778:17800..18559 | 1691683072.0490787-UTR-L-elsbetiae_contig1778:17800..18559 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1778 17801..18559 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1778.5055.1 >prot_L-elsbetiae_contig1778.5055.1 ID=prot_L-elsbetiae_contig1778.5055.1|Name=mRNA_L-elsbetiae_contig1778.5055.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=357bp
QGVAAVHTSGAAGASKRTVTQSTTQSTTGGANDVVNIDDDDDDEDDDCSV
VEVAEEAARPGTDVGAGGSGAAAASSTPRGGGGRGGGGGRGKRKAVAEAG
ASPFAIAAAGGYSPAAVAKVRRATPTLPSLSKLATASPSQGAAPREGDID
SPPPPTAGTAADTQGGGSRSSSYVGRSSSRGSKRPRPADECGGGKGCVGL
SADRWGAPGSGGGGGAGGGRAGSDRVGAKARSLSFADDDVEEEDEGGGGG
GNRRNGTGGSGPNAGGNGPNAGGSSGGGSSSCRRDAAVSLPASSCSADGG
VVDLSLDSPSPPPPRSRQQQGQGRPRKDSGGGGACGGGGADDVVLEACSS
DDDFPL* back to topmRNA from alignment at L-elsbetiae_contig1778:16718..18559+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig1778.5055.1 ID=mRNA_L-elsbetiae_contig1778.5055.1|Name=mRNA_L-elsbetiae_contig1778.5055.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1842bp|location=Sequence derived from alignment at L-elsbetiae_contig1778:16718..18559+ (Laminarionema elsbetiae ELsaHSoW15)
CAGGGTGTGGCAGCTGTGCACACCTCTGGTGCTGCCGGGGCCAGCAAGCG
GACGGTGACGCAGTCGACGACGCAGTCGACGACGCAGTCGACGAGGGGTG
GCGCGAACGATGTCGTTAACATCGACGACGACGATGACGACGAGGATGAT
GACTGCAGCGTCGTGGAAGTAGCCGAGGAAGCAGCCCGCCCAGGTACCGA
TGTCGGCGCCGGCGGGTCCGGTGCCGCGGCGGCCTCTTCGACCCCGCGCG
GTGGCGGCGGTCGTGGCGGTGGCGGCGGCCGAGGCAAGAGGAAGGCGGTG
GCGGAGGCGGGAGCCTCGCCCTTCGCGATCGCTGCGGCCGGGGGATACTC
CCCTGCGGCCGTTGCCAAGGTCAGGAGAGCGACGCCGACGTTGCCGTCGC
TTTCTAAACTGGCAACGGCCTCCCCGTCGCAGGGAGCGGCGCCGCGCGAG
GGGGACATAGACTCTCCTCCTCCGCCGACGGCGGGCACGGCGGCGGACAC
GCAAGGAGGAGGGAGCCGAAGCAGCAGCTATGTCGGCCGAAGCTCGAGCA
GAGGCAGCAAGCGGCCTCGGCCGGCCGACGAGTGCGGCGGAGGGAAAGGG
TGCGTGGGTCTCAGCGCAGATAGGTGGGGTGCGCCCGGGAGCGGCGGCGG
TGGTGGCGCCGGCGGTGGCAGGGCCGGTAGCGACCGGGTAGGTGCAAAAG
CGCGCTCTCTCTCTTTCGCGGACGACGATGTCGAGGAAGAAGACGAGGGT
GGCGGCGGTGGCGGGAACCGGAGAAACGGGACCGGTGGCAGCGGCCCCAA
TGCCGGCGGCAACGGCCCTAATGCCGGCGGCAGCAGCGGTGGAGGATCGT
CGTCCTGTCGGCGCGACGCTGCTGTCTCCTTGCCGGCCTCTTCGTGTTCA
GCGGACGGGGGTGTCGTGGACCTCAGCCTCGACAGTCCGTCACCTCCTCC
GCCACGCTCTCGGCAGCAGCAGGGTCAAGGGCGGCCCCGGAAGGACTCGG
GCGGCGGCGGAGCATGTGGGGGAGGAGGGGCCGACGATGTTGTGCTGGAG
GCATGCTCTTCGGACGATGATTTTCCATTGTAACCTTGCGCGCGTGATGG
ACACGTGTTTTCGTCAGTGATGTTTTTTGTTTTTGTTGGTCAGTCTAGAG
GATATATGCATATGTTCGTTGTATTATAAATGGATGTAGGGGACACAATA
GATGAAATAACCCCGGTCGATCACGTACCCAGACATGAAGCTCTGCACTG
GTTGCATGGGGGGCAGTGTTGAGTGGAATTTGAAGCAACATTCCAAAAGG
GTGTACGAAGTACTCATCAGGCTCAGTCCTGTACGTTCACAAATGACTGA
TTTCATTACCCCGGGCCTCCTGAGAGCATCATGCCAAGCAGTCCAGGCGT
CTCCCTCGCTCACACCCAATCGGGGAGTGTGTTGCTTACCGTTAATATTT
TGTGCTGTTTGTGCTTCGGCTGTTGGGTTGCCGTTACGACACTGTAGTTC
GGTCCTCCAAGCAACCAGCAGCCTGGCGAAGACTCGAGGATGGTGGTAGA
TCAGCTTGTCGCTGTCGCTCGTGGGCTTGTGAACGTATTTTTTGGCCTGG
TGCTTGTAGATGTATTTTTGTTTCTTTCTCCTTGGGTTGTCTTATTTGCT
TTGATTACACCGCGTCTTTTGTCATATTCTCTACAAGCACATAGCCTGGA
TGATGTGTGGTAACCTCTCGCATGCGAATTGGGTGCTGATGAGAGAGTGT
AAAACTAAAGCGTCTGTATCTGCCTACCACCTTGCAACAGCCGTTCGCCA
ACGGGTTGATTGTAACACGCATTAGCACGAGCTACGGATTTA back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig1778:16718..18559+ >mRNA_L-elsbetiae_contig1778.5055.1 ID=mRNA_L-elsbetiae_contig1778.5055.1|Name=mRNA_L-elsbetiae_contig1778.5055.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2142bp|location=Sequence derived from alignment at L-elsbetiae_contig1778:16718..18559+ (Laminarionema elsbetiae ELsaHSoW15)
CAGGGTGTGGCAGCTGTGCACACCTCTGGTGCTGCCGGGGCCAGCAAGCG
GACGGTGACGCAGTCGACGACGCAGTCGACGACCAGGGTGTGGCAGCTGT
GCACACCTCTGGTGCTGCCGGGGCCAGCAAGCGGACGGTGACGCAGTCGA
CGACGCAGTCGACGACGGGTGGCGCGAACGATGTCGTTAACATCGACGAC
GACGATGACGACGAGGATGATGACTGCAGCGTCGTGGAAGTAGCCGAGGA
AGCAGCCCGCCCAGGTACCGATGTCGGCGCCGGCGGGTCCGGTGCCGCGG
CGGCCTCTTCGACCCCGCGCGGTGGCGGCGGTCGTGGCGGTGGCGGCGGC
CGAGGCAAGAGGAAGGCGGTGGCGGAGGCGGGAGCCTCGCCCTTCGCGAT
CGCTGCGGCCGGGGGATACTCCCCTGCGGCCGTTGCCAAGGTCAGGAGAG
CGACGCCGACGTTGCCGTCGCTTTCTAAACTGGCAACGGCCTCCCCGTCG
CAGGGAGCGGCGCCGCGCGAGGGGGACATAGACTCTCCTCCTCCGCCGAC
GGCGGGCACGGCGGCGGACACGCAAGGAGGAGGGAGCCGAAGCAGCAGCT
ATGTCGGCCGAAGCTCGAGCAGAGGCAGCAAGCGGCCTCGGCCGGCCGAC
GAGTGCGGCGGAGGGAAAGGGTGCGTGGGTCTCAGCGCAGATAGGTGGGG
TGCGCCCGGGAGCGGCGGCGGTGGTGGCGCCGGCGGTGGCAGGGCCGGTA
GCGACCGGGTAGGTGCAAAAGCGCGCTCTCTCTCTTTCGCGGACGACGAT
GTCGAGGAAGAAGACGAGGGTGGCGGCGGTGGCGGGAACCGGAGAAACGG
GACCGGTGGCAGCGGCCCCAATGCCGGCGGCAACGGCCCTAATGCCGGCG
GCAGCAGCGGTGGAGGATCGTCGTCCTGTCGGCGCGACGCTGCTGTCTCC
TTGCCGGCCTCTTCGTGTTCAGCGGACGGGGGTGTCGTGGACCTCAGCCT
CGACAGTCCGTCACCTCCTCCGCCACGCTCTCGGCAGCAGCAGGGTCAAG
GGCGGCCCCGGAAGGACTCGGGCGGCGGCGGAGCATGTGGGGGAGGAGGG
GCCGACGATGTTGTGCTGGAGGCATGCTCTTCGGACGATGATTTTCCATT
GTAAGGGTGGCGCGAACGATGTCGTTAACATCGACGACGACGATGACGAC
GAGGATGATGACTGCAGCGTCGTGGAAGTAGCCGAGGAAGCAGCCCGCCC
AGGTACCGATGTCGGCGCCGGCGGGTCCGGTGCCGCGGCGGCCTCTTCGA
CCCCGCGCGGTGGCGGCGGTCGTGGCGGTGGCGGCGGCCGAGGCAAGAGG
AAGGCGGTGGCGGAGGCGGGAGCCTCGCCCTTCGCGATCGCTGCGGCCGG
GGGATACTCCCCTGCGGCCGTTGCCAAGGTCAGGAGAGCGACGCCGACGT
TGCCGTCGCTTTCTAAACTGGCAACGGCCTCCCCGTCGCAGGGAGCGGCG
CCGCGCGAGGGGGACATAGACTCTCCTCCTCCGCCGACGGCGGGCACGGC
GGCGGACACGCAAGGAGGAGGGAGCCGAAGCAGCAGCTATGTCGGCCGAA
GCTCGAGCAGAGGCAGCAAGCGGCCTCGGCCGGCCGACGAGTGCGGCGGA
GGGAAAGGGTGCGTGGGTCTCAGCGCAGATAGGTGGGGTGCGCCCGGGAG
CGGCGGCGGTGGTGGCGCCGGCGGTGGCAGGGCCGGTAGCGACCGGGTAG
GTGCAAAAGCGCGCTCTCTCTCTTTCGCGGACGACGATGTCGAGGAAGAA
GACGAGGGTGGCGGCGGTGGCGGGAACCGGAGAAACGGGACCGGTGGCAG
CGGCCCCAATGCCGGCGGCAACGGCCCTAATGCCGGCGGCAGCAGCGGTG
GAGGATCGTCGTCCTGTCGGCGCGACGCTGCTGTCTCCTTGCCGGCCTCT
TCGTGTTCAGCGGACGGGGGTGTCGTGGACCTCAGCCTCGACAGTCCGTC
ACCTCCTCCGCCACGCTCTCGGCAGCAGCAGGGTCAAGGGCGGCCCCGGA
AGGACTCGGGCGGCGGCGGAGCATGTGGGGGAGGAGGGGCCGACGATGTT
GTGCTGGAGGCATGCTCTTCGGACGATGATTTTCCATTGTAA back to top
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