mRNA_L-elsbetiae_contig17764.5049.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig17764.5049.1 vs. uniprot
Match: A0A6H5KH24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH24_9PHAE) HSP 1 Score: 171 bits (434), Expect = 9.440e-53 Identity = 80/116 (68.97%), Postives = 97/116 (83.62%), Query Frame = 1 Query: 1 LALLCGLAGEEDLCLLLTVYSLYRWSLFRQLVAPTTMEGIRPNFDFFEVIGGFDFKELLRFEKPHFLQLLQRLELPDVIEIYRGGYGHSRIPADLALAITLWRLGAPSTLIRDRLF 348 LAL+CG+AGEEDLC+LL V LY W +L+APTT+EG+ PN + FE IGGFDFKE+ RFE PHFLQLL+RLELPD E+ RGGYG +R+PAD+ALA+TLWRL AP+TL+RDRLF Sbjct: 23 LALICGVAGEEDLCMLLCVCCLYEWRRHHELLAPTTLEGLFPNLNCFEAIGGFDFKEVFRFENPHFLQLLRRLELPDSFEVSRGGYGVTRVPADVALALTLWRLSAPTTLVRDRLF 138
BLAST of mRNA_L-elsbetiae_contig17764.5049.1 vs. uniprot
Match: A0A6H5JNG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNG9_9PHAE) HSP 1 Score: 158 bits (399), Expect = 1.350e-45 Identity = 75/110 (68.18%), Postives = 91/110 (82.73%), Query Frame = 1 Query: 22 AGEEDLCLLLTVYSLYRWSLFRQLVAPTTMEGIRPNFDFFEVIGGFDFKELLRFEKPHFLQLLQRLELPDVIEIYRGGYGHSRIPADLALAITL-WRLGAPSTLIRDRLF 348 AGEEDLC+L V LY W + +L+APTT+EG+ PN +FFE IGGFDFKE+ RFEKPHFLQLL+RLELPD E+ RGGYG +R+PAD+ALA+TL WRL AP+TL+RDR F Sbjct: 30 AGEEDLCMLWCVCCLYEWRRYHELLAPTTLEGVFPNLNFFEAIGGFDFKEVFRFEKPHFLQLLRRLELPDSSEVSRGGYGVTRVPADVALALTLLWRLSAPTTLVRDRSF 139
BLAST of mRNA_L-elsbetiae_contig17764.5049.1 vs. uniprot
Match: D7G529_ECTSI (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G529_ECTSI) HSP 1 Score: 156 bits (394), Expect = 3.410e-44 Identity = 73/116 (62.93%), Postives = 94/116 (81.03%), Query Frame = 1 Query: 1 LALLCGLAGEEDLCLLLTVYSLYRWSLFRQLVAPTTMEGIRPNFDFFEVIGGFDFKELLRFEKPHFLQLLQRLELPDVIEIYRGGYGHSRIPADLALAITLWRLGAPSTLIRDRLF 348 +A++ + GEEDL L++ Y+L +L+ QLVAPTT+ G+ P+FDFFEVIGGFDFKEL RFEKPHFL+LL LELP+ E++RGGYG S++PA LAL +TLWRL P+TL+RDRLF Sbjct: 1 MAVMLAMMGEEDLFLVMGAYALQEMALYDQLVAPTTLPGVCPHFDFFEVIGGFDFKELFRFEKPHFLRLLDALELPEYFELHRGGYGVSKVPARLALGVTLWRLACPTTLLRDRLF 116
BLAST of mRNA_L-elsbetiae_contig17764.5049.1 vs. uniprot
Match: A0A6H5JZ31_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ31_9PHAE) HSP 1 Score: 152 bits (384), Expect = 1.610e-42 Identity = 76/116 (65.52%), Postives = 90/116 (77.59%), Query Frame = 1 Query: 1 LALLCGLAGEEDLCLLLTVYSLYRWSLFRQLVAPTTMEGIRPNFDFFEVIGGFDFKELLRFEKPHFLQLLQRLELPDVIEIYRGGYGHSRIPADLALAITLWRLGAPSTLIRDRLF 348 +A LC L G EDL ++L YSL RW +++QLVA TT+EGIR FD+FE IGGFDFKELLRFEKPHFL LL L+LP+ E+ R GYG R+PA LA A+TLWRL AP TLIRDR+F Sbjct: 23 IAALCALVGGEDLFIVLGTYSLLRWQMYKQLVAATTIEGIR--FDYFERIGGFDFKELLRFEKPHFLDLLGALQLPNTFEVSRWGYGVQRVPARLAFAVTLWRLAAPRTLIRDRIF 136
BLAST of mRNA_L-elsbetiae_contig17764.5049.1 vs. uniprot
Match: A0A6H5KR86_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR86_9PHAE) HSP 1 Score: 151 bits (382), Expect = 2.230e-42 Identity = 71/115 (61.74%), Postives = 89/115 (77.39%), Query Frame = 1 Query: 4 ALLCGLAGEEDLCLLLTVYSLYRWSLFRQLVAPTTMEGIRPNFDFFEVIGGFDFKELLRFEKPHFLQLLQRLELPDVIEIYRGGYGHSRIPADLALAITLWRLGAPSTLIRDRLF 348 A+LC LAGEEDL L+L++ L + + +L+ PT +EG+ P ++ F IGG DFKEL RFEKPHF QLL LELP IEIYRGGYG +R+PAD+ALA+T+WRL P+TLIRDRLF Sbjct: 24 AVLCALAGEEDLFLVLSLLGLVQLEAYEELITPTILEGVYPTYNLFYAIGGMDFKELFRFEKPHFRQLLYELELPKCIEIYRGGYGVTRVPADIALAVTIWRLACPTTLIRDRLF 138
BLAST of mRNA_L-elsbetiae_contig17764.5049.1 vs. uniprot
Match: A0A6H5L0G5_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0G5_9PHAE) HSP 1 Score: 151 bits (382), Expect = 3.320e-42 Identity = 69/116 (59.48%), Postives = 92/116 (79.31%), Query Frame = 1 Query: 1 LALLCGLAGEEDLCLLLTVYSLYRWSLFRQLVAPTTMEGIRPNFDFFEVIGGFDFKELLRFEKPHFLQLLQRLELPDVIEIYRGGYGHSRIPADLALAITLWRLGAPSTLIRDRLF 348 LA+LC LAGEED+ L++ + L + + +L+APT +EG+ P ++FF+ IGG DFKEL RFEKPHF +LL L+LP+ IEI+RGG+G SR+P DLALA+T+WRL P+TLIRDRLF Sbjct: 23 LAVLCALAGEEDMFLVMATFGLAKLEAYEELIAPTILEGVCPMYNFFDAIGGLDFKELFRFEKPHFRELLHELQLPEEIEIHRGGFGVSRVPIDLALAVTIWRLACPTTLIRDRLF 138
BLAST of mRNA_L-elsbetiae_contig17764.5049.1 vs. uniprot
Match: A0A6H5L856_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L856_9PHAE) HSP 1 Score: 148 bits (374), Expect = 4.890e-41 Identity = 72/116 (62.07%), Postives = 88/116 (75.86%), Query Frame = 1 Query: 1 LALLCGLAGEEDLCLLLTVYSLYRWSLFRQLVAPTTMEGIRPNFDFFEVIGGFDFKELLRFEKPHFLQLLQRLELPDVIEIYRGGYGHSRIPADLALAITLWRLGAPSTLIRDRLF 348 L L C + GEED+CL+L L +W + +LV PT ++G+R +DFFEV+GGFDFKEL RFEKPHFL LL LELP +EI+RGGY RIPA L LA+TLWRL AP+TL+RDRLF Sbjct: 23 LCLACSVLGEEDMCLVLGALWLLKWRAYEELVRPTVLDGVR--YDFFEVLGGFDFKELFRFEKPHFLLLLAALELPAELEIWRGGYSCQRIPARLGLAVTLWRLAAPTTLLRDRLF 136
BLAST of mRNA_L-elsbetiae_contig17764.5049.1 vs. uniprot
Match: A0A6H5KL05_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL05_9PHAE) HSP 1 Score: 144 bits (362), Expect = 3.090e-39 Identity = 67/102 (65.69%), Postives = 83/102 (81.37%), Query Frame = 1 Query: 43 LLLTVYSLYRWSLFRQLVAPTTMEGIRPNFDFFEVIGGFDFKELLRFEKPHFLQLLQRLELPDVIEIYRGGYGHSRIPADLALAITLWRLGAPSTLIRDRLF 348 +LL V LY W + +L+ PTT+EG+ PN +FFE IGGFDFKE+ RFEKPHFLQLL+RLELPD E+ R GYG +R+PA +ALA+TLWRL AP+TL+RDRLF Sbjct: 1 MLLCVCCLYEWRRYHELLGPTTLEGVFPNLNFFEAIGGFDFKEVFRFEKPHFLQLLRRLELPDSFEVSRQGYGVTRVPAYVALALTLWRLSAPTTLVRDRLF 102
BLAST of mRNA_L-elsbetiae_contig17764.5049.1 vs. uniprot
Match: A0A6H5KAA1_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAA1_9PHAE) HSP 1 Score: 140 bits (353), Expect = 6.350e-38 Identity = 69/116 (59.48%), Postives = 87/116 (75.00%), Query Frame = 1 Query: 1 LALLCGLAGEEDLCLLLTVYSLYRWSLFRQLVAPTTMEGIRPNFDFFEVIGGFDFKELLRFEKPHFLQLLQRLELPDVIEIYRGGYGHSRIPADLALAITLWRLGAPSTLIRDRLF 348 LA++C GE+DL L+L Y + +W + +LVAPT + G+R +DF EV+GGFDFKE+ RFEK HF QLL LELP +EI RGG+G RIPA LALA+TLWR AP+TL+RDRLF Sbjct: 23 LAVVCAALGEDDLFLVLGAYWMLKWRAYLELVAPTQLGGVR--YDFMEVLGGFDFKEVFRFEKSHFRQLLAALELPPELEIRRGGFGTQRIPASLALAVTLWRFAAPTTLLRDRLF 136
BLAST of mRNA_L-elsbetiae_contig17764.5049.1 vs. uniprot
Match: A0A6H5JXV8_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV8_9PHAE) HSP 1 Score: 135 bits (341), Expect = 3.790e-36 Identity = 65/115 (56.52%), Postives = 86/115 (74.78%), Query Frame = 1 Query: 4 ALLCGLAGEEDLCLLLTVYSLYRWSLFRQLVAPTTMEGIRPNFDFFEVIGGFDFKELLRFEKPHFLQLLQRLELPDVIEIYRGGYGHSRIPADLALAITLWRLGAPSTLIRDRLF 348 ALLC + GEE++ L+L V ++ R + QLV PTT G+ P +F EVIGGFDF+EL RFEKP F+ LL+ ELP +EI+RGG+G SR+P ++AL +TLWRL P+TL+RDRLF Sbjct: 24 ALLCAVVGEEEVFLVLAVVAMQRLRAYEQLVEPTTHAGMYPTHNFMEVIGGFDFRELFRFEKPDFILLLEVQELPAELEIHRGGFGTSRVPMEIALGLTLWRLACPTTLLRDRLF 138 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17764.5049.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig17764.5049.1 >prot_L-elsbetiae_contig17764.5049.1 ID=prot_L-elsbetiae_contig17764.5049.1|Name=mRNA_L-elsbetiae_contig17764.5049.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=116bp LALLCGLAGEEDLCLLLTVYSLYRWSLFRQLVAPTTMEGIRPNFDFFEVIback to top mRNA from alignment at L-elsbetiae_contig17764:1739..2467- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig17764.5049.1 ID=mRNA_L-elsbetiae_contig17764.5049.1|Name=mRNA_L-elsbetiae_contig17764.5049.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=729bp|location=Sequence derived from alignment at L-elsbetiae_contig17764:1739..2467- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig17764:1739..2467- >mRNA_L-elsbetiae_contig17764.5049.1 ID=mRNA_L-elsbetiae_contig17764.5049.1|Name=mRNA_L-elsbetiae_contig17764.5049.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=696bp|location=Sequence derived from alignment at L-elsbetiae_contig17764:1739..2467- (Laminarionema elsbetiae ELsaHSoW15)back to top |