mRNA_L-elsbetiae_contig17761.5048.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig17761.5048.1 vs. uniprot
Match: D8LBD4_ECTSI (PNPLA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBD4_ECTSI) HSP 1 Score: 118 bits (296), Expect = 9.240e-31 Identity = 58/72 (80.56%), Postives = 62/72 (86.11%), Query Frame = 3 Query: 15 FFTGGLLFPYHLGVAKCLELEGFLADDTPLAGSSAGALAAAVVGCGLDIDAASELSKAVFDDCRQGGTAFRL 230 F GGLLFPYHLGVAKCLE+EGFL++DTPLAGSSAGALAA VVGCGL ID A+ELS VFDDC GG AFRL Sbjct: 48 FTPGGLLFPYHLGVAKCLEMEGFLSNDTPLAGSSAGALAAVVVGCGLSIDTAAELSGRVFDDCSDGGAAFRL 119
BLAST of mRNA_L-elsbetiae_contig17761.5048.1 vs. uniprot
Match: UPI00053C60AA (patanin-like phospholipase domain-containing protein isoform X2 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C60AA) HSP 1 Score: 89.4 bits (220), Expect = 2.400e-19 Identity = 43/72 (59.72%), Postives = 54/72 (75.00%), Query Frame = 3 Query: 15 FFTGGLLFPYHLGVAKCLELEGFLADDTPLAGSSAGALAAAVVGCGLDIDAASELSKAVFDDCRQGGTAFRL 230 F GGLLFPYHLGVA+ L +G++ + TPLAGSSAGA+ AV+ CGL + A E +K + DDCR+ GTAFRL Sbjct: 127 FSVGGLLFPYHLGVAQFLIEKGYIKETTPLAGSSAGAIICAVIACGLSMQKALEATKTIADDCRRKGTAFRL 198
BLAST of mRNA_L-elsbetiae_contig17761.5048.1 vs. uniprot
Match: UPI00053C0FFC (uncharacterized protein LOC104813074 isoform X1 n=2 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C0FFC) HSP 1 Score: 89.4 bits (220), Expect = 2.700e-19 Identity = 43/72 (59.72%), Postives = 54/72 (75.00%), Query Frame = 3 Query: 15 FFTGGLLFPYHLGVAKCLELEGFLADDTPLAGSSAGALAAAVVGCGLDIDAASELSKAVFDDCRQGGTAFRL 230 F GGLLFPYHLGVA+ L +G++ + TPLAGSSAGA+ AV+ CGL + A E +K + DDCR+ GTAFRL Sbjct: 127 FSVGGLLFPYHLGVAQFLIEKGYIKETTPLAGSSAGAIICAVIACGLSMQKALEATKTIADDCRRKGTAFRL 198
BLAST of mRNA_L-elsbetiae_contig17761.5048.1 vs. uniprot
Match: UPI001CB8CCE1 (patatin-like phospholipase domain-containing protein 4 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8CCE1) HSP 1 Score: 87.4 bits (215), Expect = 1.420e-18 Identity = 43/72 (59.72%), Postives = 52/72 (72.22%), Query Frame = 3 Query: 15 FFTGGLLFPYHLGVAKCLELEGFLADDTPLAGSSAGALAAAVVGCGLDIDAASELSKAVFDDCRQGGTAFRL 230 F GLLFPYHLGVAKCL +G++ D TPLAGSSAGA+ AVV G ++ A E +K + +DCR GTAFRL Sbjct: 159 FSAAGLLFPYHLGVAKCLIEKGYIKDTTPLAGSSAGAIVCAVVASGASMEEALEATKVLAEDCRSRGTAFRL 230
BLAST of mRNA_L-elsbetiae_contig17761.5048.1 vs. uniprot
Match: A0A6A4K727_9ERIC (Patatin (Fragment) n=2 Tax=Rhododendron TaxID=4346 RepID=A0A6A4K727_9ERIC) HSP 1 Score: 83.2 bits (204), Expect = 5.390e-17 Identity = 42/72 (58.33%), Postives = 52/72 (72.22%), Query Frame = 3 Query: 15 FFTGGLLFPYHLGVAKCLELEGFLADDTPLAGSSAGALAAAVVGCGLDIDAASELSKAVFDDCRQGGTAFRL 230 F GLLFPYHLGVAK L +G++ D TPLAGSSAGA+ AVV G ++ A E +K + +DCR+ GTAFRL Sbjct: 179 FSAAGLLFPYHLGVAKFLIEKGYIKDTTPLAGSSAGAIVCAVVASGASMEEALEATKILAEDCRRRGTAFRL 250
BLAST of mRNA_L-elsbetiae_contig17761.5048.1 vs. uniprot
Match: A0A251TCP3_HELAN (Patatin n=2 Tax=Helianthus annuus TaxID=4232 RepID=A0A251TCP3_HELAN) HSP 1 Score: 82.4 bits (202), Expect = 1.160e-16 Identity = 42/72 (58.33%), Postives = 50/72 (69.44%), Query Frame = 3 Query: 15 FFTGGLLFPYHLGVAKCLELEGFLADDTPLAGSSAGALAAAVVGCGLDIDAASELSKAVFDDCRQGGTAFRL 230 F GLLFPYHLGVAK L +G++ D TPLAGSSAGA+ AVV G ++ A E +K + DCR GTAFRL Sbjct: 184 FSAAGLLFPYHLGVAKFLIEKGYIKDTTPLAGSSAGAIVCAVVASGASMEEALEATKVLAQDCRSRGTAFRL 255
BLAST of mRNA_L-elsbetiae_contig17761.5048.1 vs. uniprot
Match: A0A162B2H9_DAUCS (PNPLA domain-containing protein n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A162B2H9_DAUCS) HSP 1 Score: 82.0 bits (201), Expect = 1.200e-16 Identity = 41/72 (56.94%), Postives = 51/72 (70.83%), Query Frame = 3 Query: 15 FFTGGLLFPYHLGVAKCLELEGFLADDTPLAGSSAGALAAAVVGCGLDIDAASELSKAVFDDCRQGGTAFRL 230 F GLLFPYHLGVAK L +G++ DDTPLAGSSAGA+ AV+ G ++ A +K + +DCR GTAFRL Sbjct: 145 FSAAGLLFPYHLGVAKLLIEKGYIKDDTPLAGSSAGAIVCAVIASGSSMEEALVATKVLAEDCRLRGTAFRL 216
BLAST of mRNA_L-elsbetiae_contig17761.5048.1 vs. uniprot
Match: A0A5N6L9K1_9ASTR (Patatin n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6L9K1_9ASTR) HSP 1 Score: 82.0 bits (201), Expect = 1.270e-16 Identity = 42/72 (58.33%), Postives = 49/72 (68.06%), Query Frame = 3 Query: 15 FFTGGLLFPYHLGVAKCLELEGFLADDTPLAGSSAGALAAAVVGCGLDIDAASELSKAVFDDCRQGGTAFRL 230 F GLLFPYHLGVAK L G++ D TPLAGSSAGA+ AVV G ++ A E +K + DCR GTAFRL Sbjct: 157 FSAAGLLFPYHLGVAKFLIENGYIKDTTPLAGSSAGAIVCAVVASGASMEEALEATKVLAQDCRSRGTAFRL 228
BLAST of mRNA_L-elsbetiae_contig17761.5048.1 vs. uniprot
Match: A0A7J7CGY4_TRIWF (Patatin n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7CGY4_TRIWF) HSP 1 Score: 82.0 bits (201), Expect = 1.340e-16 Identity = 40/72 (55.56%), Postives = 51/72 (70.83%), Query Frame = 3 Query: 15 FFTGGLLFPYHLGVAKCLELEGFLADDTPLAGSSAGALAAAVVGCGLDIDAASELSKAVFDDCRQGGTAFRL 230 F GLLFPYHLGVA+CL +G++ + TPLAGSSAGA+ AAV+ G + A +K + +DCR GTAFRL Sbjct: 167 FSAAGLLFPYHLGVAQCLIEKGYIKETTPLAGSSAGAIVAAVIASGASMQEALRATKVLAEDCRLKGTAFRL 238
BLAST of mRNA_L-elsbetiae_contig17761.5048.1 vs. uniprot
Match: A0A103YKZ4_CYNCS (Patatin (Fragment) n=2 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A103YKZ4_CYNCS) HSP 1 Score: 81.6 bits (200), Expect = 1.920e-16 Identity = 41/72 (56.94%), Postives = 50/72 (69.44%), Query Frame = 3 Query: 15 FFTGGLLFPYHLGVAKCLELEGFLADDTPLAGSSAGALAAAVVGCGLDIDAASELSKAVFDDCRQGGTAFRL 230 F GLLFPYHLGVAK L +G++ D TPLAGSSAGA+ A V G ++ A E +K + +DCR GTAFRL Sbjct: 190 FSAAGLLFPYHLGVAKLLIEKGYIKDTTPLAGSSAGAIVCAAVASGASMEEALEATKILAEDCRSRGTAFRL 261 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17761.5048.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig17761.5048.1 >prot_L-elsbetiae_contig17761.5048.1 ID=prot_L-elsbetiae_contig17761.5048.1|Name=mRNA_L-elsbetiae_contig17761.5048.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=77bp MYLRSFSQEDSCSRITLVSPNAWSSKGSWRMTRPWLGLLQGHWQPLWLDAback to top mRNA from alignment at L-elsbetiae_contig17761:355..750- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig17761.5048.1 ID=mRNA_L-elsbetiae_contig17761.5048.1|Name=mRNA_L-elsbetiae_contig17761.5048.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=396bp|location=Sequence derived from alignment at L-elsbetiae_contig17761:355..750- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig17761:355..750- >mRNA_L-elsbetiae_contig17761.5048.1 ID=mRNA_L-elsbetiae_contig17761.5048.1|Name=mRNA_L-elsbetiae_contig17761.5048.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=462bp|location=Sequence derived from alignment at L-elsbetiae_contig17761:355..750- (Laminarionema elsbetiae ELsaHSoW15)back to top |