mRNA_L-elsbetiae_contig17742.5044.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig17742.5044.1
Unique NamemRNA_L-elsbetiae_contig17742.5044.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig17742.5044.1 vs. uniprot
Match: D7G555_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G555_ECTSI)

HSP 1 Score: 199 bits (507), Expect = 1.590e-57
Identity = 102/116 (87.93%), Postives = 110/116 (94.83%), Query Frame = 1 
Query:    1 LQDEAVSVRLEIIRGLEANRTLDPLVALAGNIQCLFQAVNDESLDVRRSAARVIGRASRQQATMVMPFVRVALVQLGRHLEVSQDPTVKKERILILTDLLASAGSLVRPYVSSIMP 348
            LQDEAV+VR EI+RGLE N  LDPLVALAGNIQCLFQ+VNDE+LDVRRSAARV+GRASRQQ+TMVMPFVRVALVQLGRHL+VSQDP VK+ERILILTDLL SAGSLVRPYVSSIMP
Sbjct:  659 LQDEAVAVRQEIVRGLETNHPLDPLVALAGNIQCLFQSVNDENLDVRRSAARVVGRASRQQSTMVMPFVRVALVQLGRHLDVSQDPLVKRERILILTDLLTSAGSLVRPYVSSIMP 774
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BLAST of mRNA_L-elsbetiae_contig17742.5044.1 vs. uniprot
Match: A0A6H5K7N2_9PHAE (LysM domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7N2_9PHAE)

HSP 1 Score: 198 bits (504), Expect = 1.180e-56
Identity = 102/116 (87.93%), Postives = 110/116 (94.83%), Query Frame = 1 
Query:    1 LQDEAVSVRLEIIRGLEANRTLDPLVALAGNIQCLFQAVNDESLDVRRSAARVIGRASRQQATMVMPFVRVALVQLGRHLEVSQDPTVKKERILILTDLLASAGSLVRPYVSSIMP 348
            LQDEAV+VR EI++GLE N  LDPLVALAGNIQCLFQ+VNDE+LDVRRSAARVIGRASRQQ+TMVMPFVRVALVQLGRHL+VSQDP VK+ERILILTDLL SAGSLVRPYVSSIMP
Sbjct: 1310 LQDEAVAVRQEIVKGLEMNHPLDPLVALAGNIQCLFQSVNDENLDVRRSAARVIGRASRQQSTMVMPFVRVALVQLGRHLDVSQDPLVKRERILILTDLLTSAGSLVRPYVSSIMP 1425
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BLAST of mRNA_L-elsbetiae_contig17742.5044.1 vs. uniprot
Match: UPI001DD7F303 (uncharacterized protein n=1 Tax=Ogataea philodendri TaxID=1378263 RepID=UPI001DD7F303)

HSP 1 Score: 69.7 bits (169), Expect = 1.750e-11
Identity = 38/116 (32.76%), Postives = 66/116 (56.90%), Query Frame = 1 
Query:    1 LQDEAVSVRLEIIRGLEANRTLDPLVALAGNIQCLFQAVNDESLDVRRSAARVIGRASRQQATMVMPFVRVALVQLGRHLEVSQDPTVKKE-RILILTDLLASAGSLVRPYVSSIM 345
            + D    +RL+I+  L      DP ++ A N++ LF  +NDESL++R++A +++GR +      ++P +R  L+QL   LE     + KKE   L+L+  ++  G L +PY+  IM
Sbjct:  605 ITDTHAEIRLQILNSL--GERFDPQLSQAENVRLLFMVLNDESLEIRKAAIKLVGRLAEINPAYIVPSLRKLLIQLLTTLEYGGHNSRKKEDTALLLSVFISHTGDLTKPYLKPIM 718
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BLAST of mRNA_L-elsbetiae_contig17742.5044.1 vs. uniprot
Match: K2H3I1_ENTNP (Serine/threonine-protein kinase TOR (Fragment) n=1 Tax=Entamoeba nuttalli (strain P19) TaxID=1076696 RepID=K2H3I1_ENTNP)

HSP 1 Score: 67.8 bits (164), Expect = 7.930e-11
Identity = 36/115 (31.30%), Postives = 62/115 (53.91%), Query Frame = 1 
Query:    1 LQDEAVSVRLEIIRGLEANRTLDPLVALAGNIQCLFQAVNDESLDVRRSAARVIGRASRQQATMVMPFVRVALVQLGRHLEVSQDPTVKKERILILTDLLASAGSLVRPYVSSIM 345
            L D    +R+ I++ L+     D  +A + N+Q LF  +NDE+L VR  A ++IGR +      VMP  R  +++L   L+   D    ++  L++  L+ S+G L +PYV  ++
Sbjct:  399 LSDPESDIRIAIMKLLDER--FDSFLAQSRNVQTLFVVLNDENLQVREYAIKIIGRLTHYNPAFVMPLFRKTIIRLLTQLQFINDLKTDEQVTLLMGQLVKSSGKLTKPYVEPLL 511
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BLAST of mRNA_L-elsbetiae_contig17742.5044.1 vs. uniprot
Match: A0A7J6S8B6_PEROL (Phosphatidylinositol kinase- protein kinase tor1 n=2 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6S8B6_PEROL)

HSP 1 Score: 65.1 bits (157), Expect = 6.670e-10
Identity = 38/113 (33.63%), Postives = 62/113 (54.87%), Query Frame = 1 
Query:    7 DEAVSVRLEIIRGLEANRTLDPLVALAGNIQCLFQAVNDESLDVRRSAARVIGRASRQQATMVMPFVRVALVQLGRHLEVSQDPTVKKERILILTDLLASAGSLVRPYVSSIM 345
            D    +R  +  G++  R  DP ++    I  + QA+NDESL VR++A +++GR        V+P +R  L+QL   LE +      +E   +L DLL+ AGS + PYV +++
Sbjct:  224 DTDPDIRFSVFDGID--RRFDPFLSDRVCIAAITQALNDESLIVRKAAVKLLGRLCHHNPAYVLPALRKLLIQLLTELEYNHADRGGEEAAELLCDLLSKAGSHMSPYVFAVV 334
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BLAST of mRNA_L-elsbetiae_contig17742.5044.1 vs. uniprot
Match: A0A7J6SH42_PEROL (Serine/threonine-protein kinase TOR (Fragment) n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6SH42_PEROL)

HSP 1 Score: 65.1 bits (157), Expect = 6.900e-10
Identity = 38/113 (33.63%), Postives = 62/113 (54.87%), Query Frame = 1 
Query:    7 DEAVSVRLEIIRGLEANRTLDPLVALAGNIQCLFQAVNDESLDVRRSAARVIGRASRQQATMVMPFVRVALVQLGRHLEVSQDPTVKKERILILTDLLASAGSLVRPYVSSIM 345
            D    +R  +  G++  R  DP ++    I  + QA+NDESL VR++A +++GR        V+P +R  L+QL   LE +      +E   +L DLL+ AGS + PYV +++
Sbjct:  238 DTDPDIRFSVFDGID--RRFDPFLSDRVCIAAITQALNDESLIVRKAAVKLLGRLCHHNPAYVLPALRKLLIQLLTELEYNHADRGGEEAAELLCDLLSKAGSHMSPYVFAVV 348
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BLAST of mRNA_L-elsbetiae_contig17742.5044.1 vs. uniprot
Match: A0A7J6PL08_PEROL (Non-specific serine/threonine protein kinase n=10 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6PL08_PEROL)

HSP 1 Score: 65.1 bits (157), Expect = 7.320e-10
Identity = 38/113 (33.63%), Postives = 62/113 (54.87%), Query Frame = 1 
Query:    7 DEAVSVRLEIIRGLEANRTLDPLVALAGNIQCLFQAVNDESLDVRRSAARVIGRASRQQATMVMPFVRVALVQLGRHLEVSQDPTVKKERILILTDLLASAGSLVRPYVSSIM 345
            D    +R  +  G++  R  DP ++    I  + QA+NDESL VR++A +++GR        V+P +R  L+QL   LE +      +E   +L DLL+ AGS + PYV +++
Sbjct:  791 DTDPDIRFSVFDGID--RRFDPFLSDRVCIAAITQALNDESLIVRKAAVKLLGRLCHHNPAYVLPALRKLLIQLLTELEYNHADRGGEEAAELLCDLLSKAGSHMSPYVFAVV 901
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BLAST of mRNA_L-elsbetiae_contig17742.5044.1 vs. uniprot
Match: C5LCQ6_PERM5 (Serine/threonine-protein kinase TOR n=2 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5LCQ6_PERM5)

HSP 1 Score: 64.7 bits (156), Expect = 9.920e-10
Identity = 37/113 (32.74%), Postives = 62/113 (54.87%), Query Frame = 1 
Query:    7 DEAVSVRLEIIRGLEANRTLDPLVALAGNIQCLFQAVNDESLDVRRSAARVIGRASRQQATMVMPFVRVALVQLGRHLEVSQDPTVKKERILILTDLLASAGSLVRPYVSSIM 345
            D    +R  +  G++  R  DP ++    +  + QA+NDESL VR++A +++GR        V+P +R  L+QL   LE +      +E   +L DLL+ AGS + PYV +++
Sbjct:  536 DTDPDIRFSVFDGID--RRFDPFLSDQVCVAAITQALNDESLIVRKAAVKLLGRLCHHNPAYVLPALRKLLIQLLTELEYNHADRGGEEAAELLCDLLSKAGSHMSPYVFAVV 646
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BLAST of mRNA_L-elsbetiae_contig17742.5044.1 vs. uniprot
Match: A0A0G4F816_VITBC (Non-specific serine/threonine protein kinase n=4 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F816_VITBC)

HSP 1 Score: 63.9 bits (154), Expect = 1.860e-9
Identity = 36/113 (31.86%), Postives = 60/113 (53.10%), Query Frame = 1 
Query:    7 DEAVSVRLEIIRGLEANRTLDPLVALAGNIQCLFQAVNDESLDVRRSAARVIGRASRQQATMVMPFVRVALVQLGRHLEVSQDPTVKKERILILTDLLASAGSLVRPYVSSIM 345
            D   S+R  ++ G +     DP +     +  L Q+++DESL VR++A R++GR        V+P +R  L+QL   LE + D   + E   +L DL+  A  L+ PY +S++
Sbjct:  777 DPEASIRHAVLEGFDFR--FDPFLCEPSCLAALNQSLHDESLQVRKTAVRLMGRLCLHNPAYVLPALRKILIQLLTDLEFAPDARHRDEAAELLGDLILEAQQLMEPYATSVI 887
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BLAST of mRNA_L-elsbetiae_contig17742.5044.1 vs. uniprot
Match: A0A7J6MVM7_PERCH (Serine/threonine-protein kinase TOR n=1 Tax=Perkinsus chesapeaki TaxID=330153 RepID=A0A7J6MVM7_PERCH)

HSP 1 Score: 63.2 bits (152), Expect = 3.450e-9
Identity = 37/113 (32.74%), Postives = 62/113 (54.87%), Query Frame = 1 
Query:    7 DEAVSVRLEIIRGLEANRTLDPLVALAGNIQCLFQAVNDESLDVRRSAARVIGRASRQQATMVMPFVRVALVQLGRHLEVSQDPTVKKERILILTDLLASAGSLVRPYVSSIM 345
            D    +R  +  G++  R  DP ++    I  + QA+NDESL VR++A +++GR        V+P +R  L+QL   LE +      +E   +L DLL+ AG+ + PYV +++
Sbjct:  381 DTDPDIRYSVFDGID--RRFDPFLSDRTCIAAITQALNDESLIVRKAAVKLLGRLCYHNPAYVLPALRKLLIQLLTELEYNHADLGGEEAAELLCDLLSKAGTHMSPYVLAVV 491
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17742.5044.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7G555_ECTSI1.590e-5787.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K7N2_9PHAE1.180e-5687.93LysM domain-containing protein (Fragment) n=1 Tax=... [more]
UPI001DD7F3031.750e-1132.76uncharacterized protein n=1 Tax=Ogataea philodendr... [more]
K2H3I1_ENTNP7.930e-1131.30Serine/threonine-protein kinase TOR (Fragment) n=1... [more]
A0A7J6S8B6_PEROL6.670e-1033.63Phosphatidylinositol kinase- protein kinase tor1 n... [more]
A0A7J6SH42_PEROL6.900e-1033.63Serine/threonine-protein kinase TOR (Fragment) n=1... [more]
A0A7J6PL08_PEROL7.320e-1033.63Non-specific serine/threonine protein kinase n=10 ... [more]
C5LCQ6_PERM59.920e-1032.74Serine/threonine-protein kinase TOR n=2 Tax=Perkin... [more]
A0A0G4F816_VITBC1.860e-931.86Non-specific serine/threonine protein kinase n=4 T... [more]
A0A7J6MVM7_PERCH3.450e-932.74Serine/threonine-protein kinase TOR n=1 Tax=Perkin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig17742contigL-elsbetiae_contig17742:2808..3156 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score198.4
Seed ortholog evalue1.9e-48
Seed eggNOG ortholog2880.D7G555
KEGG koko:K06642,ko:K07203,ko:K08873
KEGG Pathwayko01521,ko01522,ko03015,ko03450,ko04012,ko04066,ko04072,ko04110,ko04136,ko04138,ko04139,ko04140,ko04150,ko04151,ko04152,ko04211,ko04212,ko04213,ko04218,ko04371,ko04630,ko04659,ko04714,ko04910,ko04919,ko04920,ko04930,ko04931,ko05165,ko05167,ko05200,ko05205,ko05206,ko05210,ko05212,ko05214,ko05215,ko05221,ko05224,ko05225,ko05226,ko05230,ko05231,map01521,map01522,map03015,map03450,map04012,map04066,map04072,map04110,map04136,map04138,map04139,map04140,map04150,map04151,map04152,map04211,map04212,map04213,map04218,map04371,map04630,map04659,map04714,map04910,map04919,map04920,map04930,map04931,map05165,map05167,map05200,map05205,map05206,map05210,map05212,map05214,map05215,map05221,map05224,map05225,map05226,map05230,map05231
KEGG ModuleM00297
Hectar predicted targeting categoryother localisation
EggNOG free text desc.phosphatidylinositol kinase activity
EggNOG OGsCOG5032@1,KOG0891@2759
EC2.7.11.1
COG Functional cat.BDLTU
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03019,ko03032,ko03400,ko04131
Exons1
Model size350
Cds size348
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815739.7972722-CDS-L-elsbetiae_contig17742:2807..31551622815739.7972722-CDS-L-elsbetiae_contig17742:2807..3155Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig17742 2808..3155 +
1691683071.4906645-CDS-L-elsbetiae_contig17742:2807..31551691683071.4906645-CDS-L-elsbetiae_contig17742:2807..3155Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig17742 2808..3155 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig17742.5044.1prot_L-elsbetiae_contig17742.5044.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig17742 2808..3155 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig17742.5044.1

>prot_L-elsbetiae_contig17742.5044.1 ID=prot_L-elsbetiae_contig17742.5044.1|Name=mRNA_L-elsbetiae_contig17742.5044.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=116bp
LQDEAVSVRLEIIRGLEANRTLDPLVALAGNIQCLFQAVNDESLDVRRSA
ARVIGRASRQQATMVMPFVRVALVQLGRHLEVSQDPTVKKERILILTDLL
ASAGSLVRPYVSSIMP
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mRNA from alignment at L-elsbetiae_contig17742:2808..3156+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig17742.5044.1 ID=mRNA_L-elsbetiae_contig17742.5044.1|Name=mRNA_L-elsbetiae_contig17742.5044.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=349bp|location=Sequence derived from alignment at L-elsbetiae_contig17742:2808..3156+ (Laminarionema elsbetiae ELsaHSoW15)
CTGCAGGACGAGGCGGTCTCCGTCCGGCTGGAGATCATCCGGGGGCTGGA
GGCGAACAGGACCCTGGACCCCCTGGTGGCGCTCGCCGGGAACATCCAGT
GCCTGTTCCAGGCGGTCAACGATGAGAGCCTCGACGTGCGGAGGAGCGCG
GCCCGCGTGATCGGCCGGGCCTCGCGGCAGCAAGCGACGATGGTGATGCC
GTTCGTCCGGGTGGCCCTCGTGCAGCTCGGGAGGCACCTGGAGGTTTCCC
AGGACCCCACGGTCAAGAAGGAGCGTATCCTCATCCTCACCGACCTCCTC
GCCTCGGCGGGCTCCCTGGTCCGGCCGTATGTGTCGAGCATCATGCCGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig17742:2808..3156+

>mRNA_L-elsbetiae_contig17742.5044.1 ID=mRNA_L-elsbetiae_contig17742.5044.1|Name=mRNA_L-elsbetiae_contig17742.5044.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=696bp|location=Sequence derived from alignment at L-elsbetiae_contig17742:2808..3156+ (Laminarionema elsbetiae ELsaHSoW15)
CTGCAGGACGAGGCGGTCTCCGTCCGGCTGGAGATCATCCGGGGGCTGGA
GGCGAACAGGACCCTGGACCCCCTGGTGGCGCTCGCCGGGAACATCCAGT
GCCTGTTCCAGGCGGTCAACGATGAGAGCCTCGACGTGCGGAGGAGCGCG
GCCCGCGTGATCGGCCGGGCCTCGCGGCAGCAAGCGACGATGGTGATGCC
GTTCGTCCGGGTGGCCCTCGTGCAGCTCGGGAGGCACCTGGAGGTTTCCC
AGGACCCCACGGTCAAGAAGGAGCGTATCCTCATCCTCACCGACCTCCTC
GCCTCGGCGGGCTCCCTGGTCCGGCCGTATGTGTCGAGCATCATGCCGCT
GCAGGACGAGGCGGTCTCCGTCCGGCTGGAGATCATCCGGGGGCTGGAGG
CGAACAGGACCCTGGACCCCCTGGTGGCGCTCGCCGGGAACATCCAGTGC
CTGTTCCAGGCGGTCAACGATGAGAGCCTCGACGTGCGGAGGAGCGCGGC
CCGCGTGATCGGCCGGGCCTCGCGGCAGCAAGCGACGATGGTGATGCCGT
TCGTCCGGGTGGCCCTCGTGCAGCTCGGGAGGCACCTGGAGGTTTCCCAG
GACCCCACGGTCAAGAAGGAGCGTATCCTCATCCTCACCGACCTCCTCGC
CTCGGCGGGCTCCCTGGTCCGGCCGTATGTGTCGAGCATCATGCCG
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