mRNA_L-elsbetiae_contig1773.5038.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1773.5038.1 vs. uniprot
Match: D8LDA3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDA3_ECTSI) HSP 1 Score: 638 bits (1645), Expect = 1.220e-225 Identity = 336/464 (72.41%), Postives = 372/464 (80.17%), Query Frame = 1
Query: 1 PQERTESYEHAHQRRSSSRPLRP-RAAPGPKETLMATNPRDLERFVDNDCRWSEFVG-WRGSKMGA--SMATSISWDGLALDPRPFARFDEHDTLTCGKKPAGSAGVRVIELEGHAPGGIFGRPATGPGRIQWTVEQEVSRVLAPDNPFKQAAADGGGVVVERPYFDSALAVVPKVQAVRPPTCIPRAGPQGDRALLAPEERREMNDYETKMQTAERVGRKARHQKTRLEFIMKHRYPEGAIGVDSPYNPASEVHEESRMAREKREAASCAQAAARRQRLDEIRGNPRPRFGYDPWQHPDLPAGGGINQGVFGGVVASGEDWGAAKPVCQNGGEHFLQTKVRMGMGHQGTTETAPAAGSRVCHAAVRKQHHGQPHRQGPASRHVQSETFINILGMREKVPKSDPAIRGQALWDEGCGRRPYNIVSGARLPLPTAKAERPPGRLAHPSQQSLERGRNLQGSLIPA 1380
PQ RT+SY+ A QR ++ P +P R+ G L ATNPR+LERFVD+ E VG R S++ A S ATSISWDGL LDPRPFARFDEH+TLT GKKPAGSAG RV+ LEGHAPGGIFGRP TGPGR+QWTVEQE SRV+APDNPF++A GGGV VERP+FDSALAVVPKVQAVRPPTC+ RAGPQGDRALLAPEERRE+NDY+TKMQ AERVGRKARHQKTRL+FI+KHRYPEGAIGVDSP NP SEVH E+R+ REK+EAAS A A+ARR RLD+IRG+PRPRFGYDPWQHPDLPAGGGI QGVFGGV A G WGA K V NGGEHFLQTK R G Q P AGSR+ R Q QP G H +SETFINILGMR+K+PKSDP +R QALWDEGCGRR YNIV+G +LPLP+ KAERPPGRLAHPSQQSLERGRNLQ SLI A
Sbjct: 7 PQPRTKSYD-ARQRTTAPLPRKPWRSGQG----LRATNPRELERFVDSSRDGIECVGVGRESRLTARTSTATSISWDGLTLDPRPFARFDEHNTLTTGKKPAGSAGARVMVLEGHAPGGIFGRPVTGPGRMQWTVEQETSRVMAPDNPFRRATVCGGGVNVERPFFDSALAVVPKVQAVRPPTCLSRAGPQGDRALLAPEERREINDYDTKMQNAERVGRKARHQKTRLDFILKHRYPEGAIGVDSPSNPTSEVHAETRLTREKKEAASSAHASARRHRLDDIRGDPRPRFGYDPWQHPDLPAGGGIQQGVFGGVTAEGGGWGAIKQVGGNGGEHFLQTKTRKGS-RQACGADVPPAGSRIGDNMTRGQ---QPSAMG----HARSETFINILGMRQKIPKSDPRVRAQALWDEGCGRRSYNIVTGVQLPLPSVKAERPPGRLAHPSQQSLERGRNLQASLIAA 457
BLAST of mRNA_L-elsbetiae_contig1773.5038.1 vs. uniprot
Match: A0A6S9K570_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9K570_HETAK) HSP 1 Score: 173 bits (438), Expect = 1.640e-45 Identity = 143/434 (32.95%), Postives = 197/434 (45.39%), Query Frame = 1
Query: 88 KETLMATNPRDLERFVDNDCRWSEFVGWRGSKMGASMATSISWDGLALDPRPFARFDEHDTLT-CGKKPAGSAGVRVIELEGHAPGGIFGRPATGPGRIQWTVEQEVSRVLAPDNPFKQAAADGG----GVVVERPYFDSALAV-VPKVQAVRPPTCIPRAGPQGDRALLAPEERREMNDYETKMQTAERVGRKARHQKTRLEFIMKHRYPEGAIGVDSPYNPASEVHEESRMAREKREAASCAQAAARRQRLDEIRGNPRPRFGYDPWQHPDLPAGGGINQGVFGGVVASGEDWGAAKPVCQNGGEHFLQTKVRMGMGHQGTTETAPAAGSRVCHAAVRKQHHGQPHRQGPASRHVQSETFINILGMREKVPKSDPAIRGQALWDEGCGRRPYNIVSGARLP-LPTAKAERPPGRLAHPSQQSLERGRNLQGS 1368
K+ A +P L +F DND R + SWDGL+++P+PFARFDE +T+ +P+G AG RVIELEGH GIFG G + TVEQ V A D AAAD V + P F V VP QAV PP + +AGP D LL P ERRE+ YE + + + +KA + RL +M+ R+P+G +GVD NP S+V+ + ++EA + + A RR L+ + G R GYDP+ H E W A P FLQ K G+R AAV +T + G + ++P R Q + ++ G + ++I++G+ + P ER LAHPSQQSLERGRN QG+
Sbjct: 5 KKKNTAVDPLRLTKFFDNDFMTKSGSLKRSNGKSQVYRPEDSWDGLSVNPKPFARFDETNTVAHAPTRPSGMAGPRVIELEGHGMDGIFGHNPKG-RPVPRTVEQIVVGHRAADGGAVGAAADPSRAEVAVAADSPRFLGTRGVQVPMAQAVAPPAVLAKAGPNWDATLLTPAERRELLQYEKRARAGAALAKKAAGDERRLVQLMRARHPQGVLGVDGAANPDSQVYRDRYEEATQKEARAQSHMARRRAELERV-GRADRRVGYDPFAHS--------------------EQWEA--PAAAGPAHRFLQAK-----------------GARP--AAV--------------------DTHDRVFG--QSTAGANPR-RTQNIRNQDLGGKAFDIINGSAIVHAPPTNNERVHRHLAHPSQQSLERGRNQQGA 372
BLAST of mRNA_L-elsbetiae_contig1773.5038.1 vs. uniprot
Match: A0A835YYF5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYF5_9STRA) HSP 1 Score: 125 bits (313), Expect = 5.320e-29 Identity = 103/303 (33.99%), Postives = 135/303 (44.55%), Query Frame = 1
Query: 508 PKVQAVRPPTCIPRAGPQGDRALLAPEERREMNDYETKMQTAERVGRKARHQKTRLEFIMKHRYPEGAIGVDSPYNPASEVHEESRMAREKREAASCAQAAARRQRLDEIRGNPRPRFGYDPWQHPDLPAGGGINQGVFGGVVASGEDWGAAKPVCQNGGEHFLQTKVRMGMGHQGTTETAPA----AGSRVCHAAVRKQHHGQPHRQGPASRHVQSETFINILGMRE------KVPKSDPAIRGQALWDEGCGRRPYNIVSGARLP--LPTAKAERPPGRLAHPSQQSLERGRNLQGSLIPA 1380
P V+A+ PP AG Q D LLAP RR +NDY+ + Q AE + R+A Q+ RL ++ R+P GA+ VDS NP + V+ + R E A A RR+RLDE+ G P RFG+DP PA TAPA A +R C +Q +P +G A+ + T L R+ P+ A R QAL D G + Y+IV+ A LP L + ER LAHPSQ SLERGRN QG+L+ A
Sbjct: 5 PPVRALPPPPDRAAAGAQCDACLLAPRARRAINDYDARRQRAEALLRQAAQQRLRLAHLLARRHPHGALRVDSEANPETVVYAAAAQRRRAAEGVLAAHAQRRRERLDELIGRPELRFGFDPLAPLPPPA-------------------------------------------------TAPAQHCSARNRCCEGMAAQQRKARPATEGSAAXXXXAHTTHERLFERDGGSGAAPRPQRRSAARAQALADAAHGGKTYDIVTNAALPPGLAPSVPERVCRWLAHPSQASLERGRNRQGALVAA 258
BLAST of mRNA_L-elsbetiae_contig1773.5038.1 vs. uniprot
Match: F0YD14_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YD14_AURAN) HSP 1 Score: 125 bits (313), Expect = 1.570e-27 Identity = 146/454 (32.16%), Postives = 191/454 (42.07%), Query Frame = 1
Query: 103 ATNPRDLERFVDN--DCRWSEFVGWR--GSK-MGASMATSI-----SWDGLALDPRPFARFDEHDTLTCGKKP--AGSAGVRVIELEGHAPGGI--FGRPATGPGRIQWTVEQEVSRVLAPDNPFKQAAADGGGVVVERPYFDSALAVVPKVQAVRPPTCIPR---AGPQGDR--ALLAPEERREMNDYETKMQTAERVGRKARHQKTRLEFIMKHRYPEGAIGVDSPYNPASEVHEESRMAREKREAASCAQAAARRQRLDEIRGN------PRPRFGYDPWQHPDLPAGGGINQGVFGGVVASGEDWGAAKPVCQNGGEHFLQTKVRMGMGHQGTTETAPAAGSRVCHA--AVRKQHHGQPHRQGPASRHVQS---ETFINILGMREKVPKSDPAIRGQALWDEGCGRRPYNIVSGARLP-LPTAKAERPPGRLAHPSQQSLERGRNLQGSL 1371
A NP L++F+D+ S VG GS+ + A S+ SWDGL++DPRPF+R D CGK AG AG RV+EL GG FG P+ G I T QE + G VVE FD+ V +V+ V P C+P+ AG D AL+AP ER E ++E K Q A +V R+A Q RL M+ +P G +GVDS N S V+ A E ++ AS R D RGN R GYDP+ H P +F+Q K CH A R++ P + P S S +T I R+ D R Q L D + Y++V+ A++ P++ ER LAHPSQQS ERGRN QGSL
Sbjct: 17 AMNPALLDKFLDSYQPQYGSGSVGLSSAGSRALSAGRGQSLYDPARSWDGLSVDPRPFSRLDTKPLPGCGKHALSAGMAGHRVVELGPSPEGGALCFG-PSQYTGTIPLTETQE---------SCARMPGAGDAAVVEVSRFDNNHVVPAEVRLVATPACVPKVFAAGIADDLGGALVAPRERVEALNFEVKQQRAAKVLRRAEMQARRLTQYMRAHHPNGVLGVDSTANRKSAVY--GAHAAEMQDLASY-----RTHHADRRRGNLSNILVGEQRHGYDPFAHDPTP----------------------------RSDIYFMQQKA--------------------CHPPYAGREKRAEFPTSKAPISAVFHSPYADTNARIFMKRDHAVNKD---RRQHLRDMDIFGKSYDVVTHAKVEQFPSSVTERTNKILAHPSQQSEERGRNTQGSL 402
BLAST of mRNA_L-elsbetiae_contig1773.5038.1 vs. uniprot
Match: A0A7S2CRD4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CRD4_9STRA) HSP 1 Score: 108 bits (269), Expect = 6.900e-22 Identity = 129/463 (27.86%), Postives = 188/463 (40.60%), Query Frame = 1
Query: 70 RAAPGPKETLMATNPRDLERFVDNDCR--WS-EFVGWRGSKMGASMATSISWDGLALDPRPFARFDEHD-----TLTCGKKPAGSAGVRVIELEGHAPGGIFGRPATGPGRIQW---TVEQEVSRVLAPDNPFKQAAADGGG---VVVERPYFDSALAVVPKVQAVRPPTCIPRA----GPQGDRALLAPEERREMNDYETKMQTAERVGRKARHQKTRLEFIMKHRYPEGAIGVDSPYNPASEVHEESRMAREKREAASCAQAAARRQRLDEIRGN------PRPRFGYDPWQHPDLPAGGGINQGVFGGVVASGEDWGAAKPVCQNGGEHFLQTKVRMGMGHQGTTETAPAAGSRVCHAAVRKQHHGQPHRQGPASRHVQSETFINILGMREKVPKSDPAIRGQALWDEGCGRRPYNI-----VSGARLPLPTAKAERPPGRLAHPSQQSLERGRNLQGSL 1371
R AP A NP L F+D+ + WS + + K S+SWDGL+++P+PF+R D+ TLT P G AG RV+EL P G+F G IQ T+ Q P+ P + A D G V+ F + ++ P+V V P + A Q R LL P+ER ++ +E K Q A + + A Q+ RL IM+HR+ EGA+GVD + A ES E R A A + R ++ + R + R+G++P+ H N+ G F+QTK G G G T + G ++ V +++ R Q L DE + YN+ V A +P +E+ + HPSQQ LERGRN+QGS+
Sbjct: 8 RTAPAKSSRRTAMNPDRLTAFMDSSTKNMWSGQTFSSKSIKPQTIYDPSLSWDGLSVNPKPFSRLDQTPEINACTLTA---PIGMAGARVVELSDGLPDGLFEGVTKGGEGIQVVPRTLIQNDVNFNHPEAPAAKMAQDPQGDVMVMESGEGFMNMRSMPPRVTTVPQPPIVGSALDTSTGQLRRYLLTPKERSDLLKHEQKTQKANALQKTAELQQRRLVQIMRHRHREGAVGVDGVNSAA-----ESGSLYEDRAAVKNAAESRRMRKAGDRRSKLATVAFAQNRYGHNPFHH---------NEEFLGPQETK-----------------FMQTKG--GSGRPGLN------------------------------------TQSRLFGAQQHVERAE---RTQHLRDEDLSGKNYNLTGHHNVQYAPSVVPQRVSEK--SYMKHPSQQLLERGRNMQGSM 393
BLAST of mRNA_L-elsbetiae_contig1773.5038.1 vs. uniprot
Match: A0A7S2XWR7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWR7_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 2.840e-20 Identity = 65/150 (43.33%), Postives = 89/150 (59.33%), Query Frame = 1
Query: 310 RVIELEGHAPGGIFGRPAT---GPGRIQWTVEQEVSRVLAP-------DNPFKQAAADGGGVVVERPYFDSALAVVP-KVQAVRPPTCIPRAGPQGDRALLAPEERREMNDYETKMQTAERVGRKARHQKTRLEFIMKHRYPEGAIGVDS 726
RVI+LEGH GG+FG + G GRIQ T EQE+ R A D+P ++ AA +VV+ P F + V + QAV P + RAG Q D+ LL PEERR++ YE + Q A ++ RKA + R+ +MK+R+PEG +GVDS
Sbjct: 2 RVIQLEGHPEGGLFGGTSATRPGQGRIQRTEEQELVRFGAHGDVKSIIDDPNRREAA----MVVDSPRFMGSKGVQALEAQAVEMPEVLARAGQQADQVLLLPEERRQIMMYEKRSQKAAKMQRKAENDHRRMMHLMKNRHPEGVLGVDS 147 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1773.5038.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1773.5038.1 >prot_L-elsbetiae_contig1773.5038.1 ID=prot_L-elsbetiae_contig1773.5038.1|Name=mRNA_L-elsbetiae_contig1773.5038.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=428bp MATNPRDLERFVDNDCRWSEFVGWRGSKMGASMATSISWDGLALDPRPFAback to top mRNA from alignment at L-elsbetiae_contig1773:10503..15597- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1773.5038.1 ID=mRNA_L-elsbetiae_contig1773.5038.1|Name=mRNA_L-elsbetiae_contig1773.5038.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5095bp|location=Sequence derived from alignment at L-elsbetiae_contig1773:10503..15597- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1773:10503..15597- >mRNA_L-elsbetiae_contig1773.5038.1 ID=mRNA_L-elsbetiae_contig1773.5038.1|Name=mRNA_L-elsbetiae_contig1773.5038.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2568bp|location=Sequence derived from alignment at L-elsbetiae_contig1773:10503..15597- (Laminarionema elsbetiae ELsaHSoW15)back to top |