mRNA_L-elsbetiae_contig17687.5000.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig17687.5000.1 vs. uniprot
Match: D7FVB1_ECTSI (ABC transporter, ATP-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVB1_ECTSI) HSP 1 Score: 246 bits (627), Expect = 1.750e-75 Identity = 130/139 (93.53%), Postives = 134/139 (96.40%), Query Frame = 1 Query: 1 SQTWLGRFLSNYQGTIVTVSHDEALLEGVKLSTVAEVANNRVEVFKGCGFKKFLFERDERMRALKIKYEAEQKEMARLQGFVDRFGAQQATKASAAQSRVKMLQKMEANATPLPEGKSSFRAKMRLPTPPACHTKQVRL 417 ++TWLGRFLSNYQGTIVTVSHDEALLEG+KLSTVAEVAN RVEVFKGCGFKKFLFERDERMRALK KYEAEQKEMARLQGFVDRFGAQ ATKASAAQSRVKMLQKMEANATPLPEGKSSFRAKMRLPTPPACHT Q+ L Sbjct: 215 AKTWLGRFLSNYQGTIVTVSHDEALLEGIKLSTVAEVANQRVEVFKGCGFKKFLFERDERMRALKSKYEAEQKEMARLQGFVDRFGAQ-ATKASAAQSRVKMLQKMEANATPLPEGKSSFRAKMRLPTPPACHTNQIEL 352
BLAST of mRNA_L-elsbetiae_contig17687.5000.1 vs. uniprot
Match: A0A835Z7Z5_9STRA (ABC transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Z5_9STRA) HSP 1 Score: 134 bits (337), Expect = 7.210e-34 Identity = 73/141 (51.77%), Postives = 101/141 (71.63%), Query Frame = 1 Query: 1 SQTWLGRFLSNYQGTIVTVSHDEALLEGVKLSTVAEVANNRVEVFKGCGFKKFLFERDERMRALKIKYEAEQKEMARLQGFVDRFGAQQATKASAAQSRVKMLQKMEANAT--PLPEGKSSFRAKMRLPTPPACHTKQVRL 417 ++TWLG+++S Y+GT+V VSHDEA +E ++ +T+AEVAN ++EVFK CG+KK+LFERDER+R K+E EQ+EMAR+Q +DRFGA+ A A R K L KM A A+ P + +A+MRLP PP+CH Q+ L Sbjct: 281 AKTWLGKYVSTYEGTVVVVSHDEAFMEAIRCTTIAEVANCKLEVFK-CGYKKYLFERDERVRLALAKFEREQEEMARMQTVIDRFGAK-TMGAKMAADRQKKLDKMAAAASDDPTELKRKVMKARMRLPAPPSCHKDQITL 419
BLAST of mRNA_L-elsbetiae_contig17687.5000.1 vs. uniprot
Match: A0A6U1L465_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A6U1L465_9CHLO) HSP 1 Score: 114 bits (286), Expect = 3.880e-28 Identity = 63/139 (45.32%), Postives = 90/139 (64.75%), Query Frame = 1 Query: 1 SQTWLGRFLSNYQGTIVTVSHDEALLEGVKLSTVAEVANNRVEVFKGCGFKKFLFERDERMRALKIKYEAEQKEMARLQGFVDRFGAQQATKASAAQSRVKMLQKMEANATPLPEGKSSFRAKMRLPTPPACHTKQVRL 417 ++ WL +L+ Y GT++ VSHDE LL S +AEV N R++ +K + ++ ER+ER ++E +Q+++A LQ FVDRFGA ATKAS AQSRVKM++K++ A P G FR K+ LP PP CH +Q+ L Sbjct: 157 ARNWLSGYLARYTGTVLLVSHDEGLLASAATS-IAEVRNGRLDTYKSRSYAQWQLEREEREEQRAAEFEKQQEQIAHLQSFVDRFGAS-ATKASQAQSRVKMIEKLKREAVEAPAGVDRFRPKLNLPRPPPCHFEQLEL 293
BLAST of mRNA_L-elsbetiae_contig17687.5000.1 vs. uniprot
Match: A0A7S0LZZ7_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LZZ7_9CRYP) HSP 1 Score: 98.6 bits (244), Expect = 1.910e-21 Identity = 63/142 (44.37%), Postives = 92/142 (64.79%), Query Frame = 1 Query: 1 SQTWLGRFLSNYQGTIVTVSHDEALLEGVKLSTVAEVANNRVEVFKGCGFKKFLFERDER-MRALKIKYEAEQKEMARLQGFVDRFGAQQATKASAAQSRVKMLQKMEANATPLPE--GKSSFRAKMRLPTPPACHTKQVRL 417 ++ WLGR++S Y+GT+V V+H+EALL L+ V EV + R VF+G + KFL ER+ER +RALK +YE +Q+E+ +LQ ++ RFGA + ASA QS+ KML+++EA LP + R +R P P C + V L Sbjct: 65 AKAWLGRYISAYEGTVVIVTHEEALLRSAALTGVIEVRDQRAHVFRG-DYAKFLVEREERVLRALK-EYEEQQREIDKLQSYITRFGATMSHAASA-QSKRKMLERIEAGRVDLPTELDTQADRPSLRFPRPQFCEQRMVAL 203
BLAST of mRNA_L-elsbetiae_contig17687.5000.1 vs. uniprot
Match: W7TQL6_9STRA (Atp-binding cassette superfamily n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQL6_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 5.960e-21 Identity = 62/139 (44.60%), Postives = 87/139 (62.59%), Query Frame = 1 Query: 1 SQTWLGRFLSNYQGTIVTVSHDEALLEGVKLSTVAEVANNRVEVFKGCGFKKFLFERDERMRALKIKYEAEQKEMARLQGFVDRFGAQQATKASAAQSRVKMLQKMEANATPLPEGKSSFRAKMRLPTPPACHTKQVRL 417 ++ WL FLS Y GT++ VSH+E LL + +TVAE+ +E+++ CG+ +FL +R+ER AL+ + KE AR+Q F+DRFGA+ AT ASAA SR K L+KM PL GK R +R P PP + V+L Sbjct: 260 AKEWLMHFLSGYTGTVLLVSHEEELLRAFQCTTVAELRFQALELYR-CGYDQFLAQREERAEALEAAAARQAKERARVQAFIDRFGAK-ATMASAANSRKKTLEKMAIIEAPLAAGK---RPHLRFPPPPKVMPELVKL 393
BLAST of mRNA_L-elsbetiae_contig17687.5000.1 vs. uniprot
Match: L1IPG6_GUITC (ABC transporter domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IPG6_GUITC) HSP 1 Score: 96.7 bits (239), Expect = 1.100e-20 Identity = 60/139 (43.17%), Postives = 87/139 (62.59%), Query Frame = 1 Query: 1 SQTWLGRFLSNYQGTIVTVSHDEALLEGVKLSTVAEVANNRVEVFKGCGFKKFLFERDERMRALKIKYEAEQKEMARLQGFVDRFGAQQATKASAAQSRVKMLQKMEANATP--LPEGKSSFRAKMRLPTPPACHTKQV 411 ++ WL +L Y+GTI+ V+H+ +LL+G+ +T+ EV + R+ VFK C KFL ER R+ A YEA+Q+E+ +LQ ++DRFGA+ A+KAS R K L+KME P L G+ R K+ LP PP C + V Sbjct: 273 AKQWLVSYLKEYKGTIMVVTHETSLLDGIACNTILEVRDKRLHVFK-CSHSKFLLERQARVDAAAKAYEAQQREIEKLQSYIDRFGAK-ASKASXXXXRKKQLEKMEVIDAPESLQTGR---RPKLVLPEPPKCRMEMV 406
BLAST of mRNA_L-elsbetiae_contig17687.5000.1 vs. uniprot
Match: A0A7S4JYL6_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4JYL6_GUITH) HSP 1 Score: 96.7 bits (239), Expect = 1.510e-20 Identity = 60/139 (43.17%), Postives = 87/139 (62.59%), Query Frame = 1 Query: 1 SQTWLGRFLSNYQGTIVTVSHDEALLEGVKLSTVAEVANNRVEVFKGCGFKKFLFERDERMRALKIKYEAEQKEMARLQGFVDRFGAQQATKASAAQSRVKMLQKMEANATP--LPEGKSSFRAKMRLPTPPACHTKQV 411 ++ WL +L Y+GTI+ V+H+ +LL+G+ +T+ EV + R+ VFK C KFL ER R+ A YEA+Q+E+ +LQ ++DRFGA+ A+KAS R K L+KME P L G+ R K+ LP PP C + V Sbjct: 273 AKQWLVSYLKEYKGTIMVVTHETSLLDGIACNTILEVRDKRLHVFK-CSHSKFLLERQARVDAAAKAYEAQQREIEKLQSYIDRFGAK-ASKASXXXXRKKQLEKMEVIDAPESLQTGR---RPKLVLPEPPKCRMEMV 406
BLAST of mRNA_L-elsbetiae_contig17687.5000.1 vs. uniprot
Match: A0A448ZLM2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZLM2_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 5.060e-20 Identity = 50/107 (46.73%), Postives = 80/107 (74.77%), Query Frame = 1 Query: 1 SQTWLGRFLSNYQGTIVTVSHDEALLEGVKLSTVAEVANNRVEVFKGCGFKKFLFERDERMRALKIKYEAEQKEMARLQGFVDRFGAQQATKASAAQSRVKMLQKME 321 ++ WLG+++++Y G++V VSHD +LL+ V ++++AE+A N V ++ C + K+L E++ R + + +YE +E ARLQ FVD+FGA ATKA +AQSRVKML+KM+ Sbjct: 256 AKDWLGKYIASYDGSVVLVSHDVSLLD-VSVNSIAEIAGNTVVEYRSCSYNKYLEEKEFRAASAQAEYERNLEEAARLQAFVDKFGAS-ATKAKSAQSRVKMLEKMK 360
BLAST of mRNA_L-elsbetiae_contig17687.5000.1 vs. uniprot
Match: B7GBE1_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GBE1_PHATC) HSP 1 Score: 91.3 bits (225), Expect = 1.020e-18 Identity = 46/107 (42.99%), Postives = 80/107 (74.77%), Query Frame = 1 Query: 1 SQTWLGRFLSNYQGTIVTVSHDEALLEGVKLSTVAEVANNRVEVFKGCGFKKFLFERDERMRALKIKYEAEQKEMARLQGFVDRFGAQQATKASAAQSRVKMLQKME 321 ++ WLG++++ Y G++V VSHD LL+ ++++AE++ N + ++GC + K+L E++ R ++ + +Y+ +E ARLQ F+D+FGA ATKA++AQSRVKML+KM+ Sbjct: 192 ARDWLGKYIAKYDGSVVLVSHDVELLDA-SVNSIAEISGNTLLEYRGCSYSKYLDEKEFRAQSAEAEYKRNLEEAARLQSFIDKFGAS-ATKAASAQSRVKMLEKMK 296
BLAST of mRNA_L-elsbetiae_contig17687.5000.1 vs. uniprot
Match: B8BXL3_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXL3_THAPS) HSP 1 Score: 91.3 bits (225), Expect = 1.100e-18 Identity = 59/134 (44.03%), Postives = 85/134 (63.43%), Query Frame = 1 Query: 1 SQTWLGRFLSNYQGTIVTVSHDEALLEGVKLSTVAEVANNRVEVFKGCGFKKFLFERDERMRALKIKYEAEQKEMARLQGFVDRFGAQQATKASAAQSRVKMLQKM--EANATPLPEG--KSSFRAKMRLPTPP 390 ++ WL +LS YQG+I+ VSHD +LL ++++AEVA + + C + K+L E++ R + +YE KE ARLQ FVD+FGA ATKA++AQSRVKM++KM E P P G + +R + LP PP Sbjct: 179 ARDWLATYLSKYQGSILLVSHDISLLSK-SVNSIAEVAGKTLIQYVSCSYDKYLTEKEFRAKTAMAEYERNLKEAARLQEFVDKFGAS-ATKAASAQSRVKMIEKMRKEGKLDPPPMGLTEKRWRPTLTLPDPP 310 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17687.5000.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig17687.5000.1 >prot_L-elsbetiae_contig17687.5000.1 ID=prot_L-elsbetiae_contig17687.5000.1|Name=mRNA_L-elsbetiae_contig17687.5000.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=142bp SQTWLGRFLSNYQGTIVTVSHDEALLEGVKLSTVAEVANNRVEVFKGCGFback to top mRNA from alignment at L-elsbetiae_contig17687:505..2639- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig17687.5000.1 ID=mRNA_L-elsbetiae_contig17687.5000.1|Name=mRNA_L-elsbetiae_contig17687.5000.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2135bp|location=Sequence derived from alignment at L-elsbetiae_contig17687:505..2639- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig17687:505..2639- >mRNA_L-elsbetiae_contig17687.5000.1 ID=mRNA_L-elsbetiae_contig17687.5000.1|Name=mRNA_L-elsbetiae_contig17687.5000.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=852bp|location=Sequence derived from alignment at L-elsbetiae_contig17687:505..2639- (Laminarionema elsbetiae ELsaHSoW15)back to top |