mRNA_L-elsbetiae_contig1768.4998.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1768.4998.1
Unique NamemRNA_L-elsbetiae_contig1768.4998.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1768.4998.1 vs. uniprot
Match: A0A6H5JDH5_9PHAE (RPA43_OB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JDH5_9PHAE)

HSP 1 Score: 314 bits (804), Expect = 3.190e-102
Identity = 156/181 (86.19%), Postives = 166/181 (91.71%), Query Frame = 3
Query:   36 MATSPFEELDLKMCVSLLPSDIGDIYAGIRRNIYQFLMRYNESLGGVLLAVSELSFGDGAKEGRIEDEMPHIHFDVKAKAQVFCPRPGHVLEGRVNKVTSTHVGMLVCGIFNASVASESMGEGFRFDLTTREWRRGGG------EVIAVGDDRKFVVTRMHEAAGLISMEGSLEGLPKEEG 560
            MA SPFEE++LKMCVSLLPSDIGDIYAGIRRNIYQFLMRYNE+LGGVLLAVS LSFGDGA+EGRIEDEMPHIHFDVKAKAQVF PRPGHVL+GRVNKVTSTHVGMLVCGIFNASVASESMGEGFRFD+T REW+R  G      EVIAVG D +FVVTRMHEAAGLIS+EGSLEGLPK +G
Sbjct:    1 MAASPFEEVELKMCVSLLPSDIGDIYAGIRRNIYQFLMRYNEALGGVLLAVSNLSFGDGAREGRIEDEMPHIHFDVKAKAQVFRPRPGHVLQGRVNKVTSTHVGMLVCGIFNASVASESMGEGFRFDMTAREWQRSRGGKDGAREVIAVGADTQFVVTRMHEAAGLISIEGSLEGLPKADG 181          
BLAST of mRNA_L-elsbetiae_contig1768.4998.1 vs. uniprot
Match: A0A835Z8S8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8S8_9STRA)

HSP 1 Score: 164 bits (415), Expect = 2.420e-40
Identity = 84/196 (42.86%), Postives = 114/196 (58.16%), Query Frame = 3
Query:   33 TMATSPFEELDLKMCVSLLPSDIGDIYAGIRRNIYQFLMRYNESLGGVLLAVSELSFGDGAKEGRIEDEMPHIHFDVKAKAQVFCPRPGHVLEGRVNK-------------VTSTHVGMLVCGIFNASV-ASESMGEGFRFDLTTREWRRG--------------GGEVIAVGDDRKFVVTRMHEAAGLISMEGSL 536
            T   SPFEE+ L +C+SLLP  + DI+  IR+N+Y+ LM YN  +GGV++A+ ++   DG   GRI +EMPH+HF+++A AQVF PR G +L GRV K             V+ THV MLVCGIFNAS+ A E  G G+ +      W R               G + + +G    F V R+H+A GLIS+EG L
Sbjct:   39 TTVVSPFEEVSLALCISLLPHALSDIFGSIRKNVYKLLMHYNRDVGGVIVALGDIRMADGEHHGRIMEEMPHLHFNIEANAQVFRPRSGALLNGRVMKPPLHAAFSCVYAQVSGTHVSMLVCGIFNASIYAGELEGVGYAYSDARARWERXXXXXXXXXXXXXXXGPDAVEMGTSLDFTVRRLHQAQGLISIEGGL 234          
BLAST of mRNA_L-elsbetiae_contig1768.4998.1 vs. uniprot
Match: A0A4D9D057_9STRA (RPA43_OB domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D057_9STRA)

HSP 1 Score: 138 bits (347), Expect = 5.760e-34
Identity = 70/172 (40.70%), Postives = 107/172 (62.21%), Query Frame = 3
Query:   48 PFEELDLKMCVSLLPSDIGDIYAGIRRNIYQFLMRYNESLGGVLLAVSELSFGDGAKEGRIEDEMPHIHFDVKAKAQVFCPRPGHVLEGRVNKVTSTHVGMLVCGIFNASVASESMGEGFRFDLTTREW-RRGGGEVIAVGDDRKFVVTRMHEAAGLISMEGSLEGLPKEEG 560
            PF+E  +   ++LLP  +G++   I   ++  LM+YN+ +GG+LL +S++ F    +   +  ++PH+H  V+A + VF P PG  L G V KVTSTHV +LV  +FNA++A E M E + FD     W   GG EV+ +G++  F V  +HEAAGLI+++GSL    +EEG
Sbjct:   31 PFQEQRVLFKLALLPDAMGNLEESIHEKLHDMLMKYNQDVGGILLTLSQVRFPPSRRFASVMGDLPHLHVRVEATSLVFTPEPGMSLTGVVIKVTSTHVALLVYDLFNAAIAREDMPEAYAFDNDREAWVGTGGKEVLGLGEEVAFRVALVHEAAGLIALDGSL----REEG 198          
BLAST of mRNA_L-elsbetiae_contig1768.4998.1 vs. uniprot
Match: A0A024G6Y8_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G6Y8_9STRA)

HSP 1 Score: 118 bits (295), Expect = 4.380e-27
Identity = 60/173 (34.68%), Postives = 100/173 (57.80%), Query Frame = 3
Query:   39 ATSPFEELDLKMCVSLLPSDIGDIYAGIRRNIYQFLMRYNESLGGVLLAVSELSFGDGAKEGRIEDEMPHIHFDVKAKAQVFCPRPGHVLEGRVNKVTSTHVGMLVCGIFNASVASESMGEGFRFDLTTREWRRGGGEVIAVGDDRKFVVTRMHEAAGLISMEGSLEGLPKEE 557
            A+SPF  + ++  +SL P  + D   GI++ + + +M+YNE+L GV+L    +   +    G I  + P++H  + A A VF PR G +L+ ++NK+ S H+GML  G+FN SVA+  + EGF ++     W    G++I V D     + R+  A G+IS+E S++   KE+
Sbjct:   19 ASSPFVSIKVRHSLSLSPCHLSDPLEGIKQELDESVMQYNETLKGVILCFDSVRLIE--PHGHIISDSPYVHCKIIANALVFQPRQGMLLKAQINKIGSNHIGMLFVGVFNGSVAASELPEGFVYNYHKESWIGNDGDIINVDDIVTVKIQRVRVAGGMISIEASMKVDQKEQ 189          
BLAST of mRNA_L-elsbetiae_contig1768.4998.1 vs. uniprot
Match: A0A2D4BXV9_PYTIN (S1 motif domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXV9_PYTIN)

HSP 1 Score: 118 bits (295), Expect = 9.340e-27
Identity = 66/165 (40.00%), Postives = 95/165 (57.58%), Query Frame = 3
Query:   45 SPFEEL-DLKMCVSLLPSDIGDIYAGIRRNIYQFLMRYNESLGGVLLAVSELSFGDGAKEGRIEDEMPHIHFDVKAKAQVFCPRPGHVLEGRVNKVTSTHVGMLVCGIFNASVASESMGEGFRFDLTTREWRRGGGEVIAVGDDRKFVVTRMHEAAGLISMEGSL 536
            SPF     ++  VSLLP  IGD   GI + +   LMRY++ L GV+L+ S +     +  G I +E P+IH  V A A VF PR G  L G VNK+ S HVG+L+ G+FN SVA+  + +G+  +     W+   G  I+VG+     V R+H A G+I++E S+
Sbjct:    3 SPFVLCKQIRQPVSLLPCHIGDARLGIDQEMTALLMRYSDKLEGVILSFSNVRLEKPS--GHILNEQPYIHCKVIADALVFQPRVGMTLSGVVNKIGSNHVGLLIAGVFNGSVAASELPKGYVHNYAEDAWKGADGTTISVGETITVKVARVHVAGGMIAIEASM 165          
BLAST of mRNA_L-elsbetiae_contig1768.4998.1 vs. uniprot
Match: A0A1V9ZJD1_9STRA (RPA43_OB domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZJD1_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.000e-26
Identity = 67/174 (38.51%), Postives = 93/174 (53.45%), Query Frame = 3
Query:   45 SPFEELDLKMCVSLLPSDIGDIYAGIRRNIYQFLMRYNESLGGVLLAVSELSFGDGAK----EGRIEDEMPHIHFDVKAKAQVFCPRPGHVLEGRVNKVTSTHVGMLVCGIFNASVASESMGEGFRFDLTTREWRRGGGEVIAVGDDRKFVVTRMHEAAGLISMEGSLEGLPKE 554
            SPF    L M  SL P  I D   G+   +   LM+Y E + GV+LA       DG K     G I +E P+IH  V  +A VF P+ G  L   VNKV S+H+G+L+ G+FN S+A+  M +G+    +   W    G  IA+  +  F V R+H A G+IS+EGS+ G  K+
Sbjct:    2 SPFVNAKLVMSCSLAPCHIHDAKKGLEEQLNLMLMKYCEPVEGVVLAF------DGIKLLNPYGHIINETPYIHVKVATEALVFRPKAGMTLSANVNKVGSSHIGLLLAGVFNVSIAAADMPKGYAHSYSDDAWINEDGATIALESEVSFTVVRVHVAHGVISIEGSMRGSKKK 169          
BLAST of mRNA_L-elsbetiae_contig1768.4998.1 vs. uniprot
Match: A0A7S1XUY3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUY3_9STRA)

HSP 1 Score: 113 bits (282), Expect = 2.110e-26
Identity = 50/100 (50.00%), Postives = 67/100 (67.00%), Query Frame = 3
Query:   45 SPFEELDLKMCVSLLPSDIGDIYAGIRRNIYQFLMRYNESLGGVLLAVSELSFGDGAKEGRIEDEMPHIHFDVKAKAQVFCPRPGHVLEGRVNKVTSTHV 344
            SPFE + L++C SLLPS +GD+  G+RR +++ LMRY    GGV++    + F  GA+ GRI DE PHIHFD+ A+A VF P+ G  L G V +V  THV
Sbjct:   34 SPFEVVTLRVCCSLLPSSLGDVPGGVRRQLFRLLMRYLPEAGGVVVGFQNIGFAPGARHGRIHDEEPHIHFDIVARALVFAPQAGLELVGEVQRVAQTHV 133          
BLAST of mRNA_L-elsbetiae_contig1768.4998.1 vs. uniprot
Match: A0A6G0XIV8_9STRA (RPA43_OB domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XIV8_9STRA)

HSP 1 Score: 115 bits (289), Expect = 5.800e-26
Identity = 65/167 (38.92%), Postives = 94/167 (56.29%), Query Frame = 3
Query:   45 SPFEELDLKMCVSLLPSDIGDIYAGIRRNIYQFLMRYNESLGGVLLAVSELSFGDGAKEGRIEDEMPHIHFDVKAKAQVFCPRPGHVLEGRVNKVTSTHVGMLVCGIFNASVASESMGEGFRFDLTTREWRRGGGEVIAVGDDRKFVVTRMHEAAGLISMEGSLEGL 545
            SPF +  L M VSL P  I +   G+   + Q LM+Y E + GVLL+ + L   +    G I +E P IH  V A A VF P PG  L   VNK+ S H+G+L+ G+FN S+A+  M  GF  +     W    G  I++ D+ +F V ++HEA G+IS++G+L  +
Sbjct:    3 SPFAKAKLVMSVSLAPYHIQNAKKGLEDQLSQMLMKYCEPVQGVLLSFNSLQMIN--PYGHIINETPFIHVRVAADALVFRPTPGMKLSATVNKIGSNHIGLLLAGVFNVSIAATEMPSGFVHNHFEEAWVGEDGASISLQDEVRFKVLQVHEAHGVISIDGTLRSV 167          
BLAST of mRNA_L-elsbetiae_contig1768.4998.1 vs. uniprot
Match: A0A058ZEH9_FONAL (RPA43_OB domain-containing protein n=1 Tax=Fonticula alba TaxID=691883 RepID=A0A058ZEH9_FONAL)

HSP 1 Score: 115 bits (287), Expect = 2.340e-25
Identity = 68/182 (37.36%), Postives = 103/182 (56.59%), Query Frame = 3
Query:   39 ATSPFEELDLKMCVSLLPSDIGDIYAGIRRNIYQFLMRYNESLGGVLLAVSELSFGDGAKE----------GRIEDEMPHIHFDVKAKAQVFCPRPGHVLEGRVNKVTSTHVGMLVCGIFNASVASESMGEGFRFDLTTREWRRG---GGEV-IAVGDDRKFVVTRMHEAAGLISMEGSLEG 542
            A SPF  +   + + LLP+D+GD   GI + +   L+ +++ +GG +L+ S++ F D A +          GRI ++ P IH  V+AK  VF P+ G  L G V K+    VGMLV G+FNAS+ +E++G  F +D +   +R+    G EV IAVG    F V R+    G+++M GSL G
Sbjct:   13 AESPFSMVTANLYMHLLPADMGDPRRGIDQRLNAMLLHHSQHIGGTVLSYSDVQFLDDAGKPASSTKNIVSGRIINDAPFIHVTVRAKFLVFKPKVGSQLVGSVIKIGPDQVGMLVLGLFNASIPTENLGSEFAYDYSEGVYRKASKSGSEVAIAVGTRLAFSVQRLDTVNGILAMTGSLRG 194          
BLAST of mRNA_L-elsbetiae_contig1768.4998.1 vs. uniprot
Match: A0A484EH94_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EH94_BRELC)

HSP 1 Score: 112 bits (281), Expect = 8.530e-25
Identity = 63/153 (41.18%), Postives = 91/153 (59.48%), Query Frame = 3
Query:   78 VSLLPSDIGDIYAGIRRNIYQFLMRYNESLGGVLLAVSELSFGDGAKEGRIEDEMPHIHFDVKAKAQVFCPRPGHVLEGRVNKVTSTHVGMLVCGIFNASVASESMGEGFRFDLTTREWRRGGGEVIAVGDDRKFVVTRMHEAAGLISMEGSL 536
            VSL P    D  AGI +N+   LM+Y+E L GV+L+ SE+        G I +EMP+IH  V A A VF P+ G +L G VNK+ S H+GML+ G+FN SVA   +  G+  + +   W    G  IAV +D +  V R+H A+G+I++E ++
Sbjct:   12 VSLSPCHAEDARAGIEQNLNDQLMQYSEPLKGVVLSFSEVQLDK--PYGVIVNEMPYIHCKVLADALVFRPKKGMILRGVVNKIGSNHIGMLIAGVFNGSVAGAELPVGYVHNYSQDCWLAKDGSSIAVENDVQVKVLRVHVASGMIAIEATM 162          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1768.4998.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JDH5_9PHAE3.190e-10286.19RPA43_OB domain-containing protein n=2 Tax=Ectocar... [more]
A0A835Z8S8_9STRA2.420e-4042.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9D057_9STRA5.760e-3440.70RPA43_OB domain-containing protein n=2 Tax=Monodop... [more]
A0A024G6Y8_9STRA4.380e-2734.68Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A2D4BXV9_PYTIN9.340e-2740.00S1 motif domain-containing protein n=1 Tax=Pythium... [more]
A0A1V9ZJD1_9STRA1.000e-2638.51RPA43_OB domain-containing protein n=1 Tax=Achlya ... [more]
A0A7S1XUY3_9STRA2.110e-2650.00Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A6G0XIV8_9STRA5.800e-2638.92RPA43_OB domain-containing protein n=1 Tax=Aphanom... [more]
A0A058ZEH9_FONAL2.340e-2537.36RPA43_OB domain-containing protein n=1 Tax=Fonticu... [more]
A0A484EH94_BRELC8.530e-2541.18Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1768contigL-elsbetiae_contig1768:12621..15796 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score315.1
Seed ortholog evalue2.8e-83
Seed eggNOG ortholog2880.D7FQC3
Preferred nameTWISTNB
KEGG rclassRC02795
KEGG koko:K03004,ko:K03234
KEGG ReactionR00435,R00441,R00442,R00443
KEGG Pathwayko00230,ko00240,ko01100,ko03020,ko04152,ko04921,map00230,map00240,map01100,map03020,map04152,map04921
KEGG ModuleM00182
Hectar predicted targeting categoryother localisation
GOsGO:0000428,GO:0001054,GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005736,GO:0006139,GO:0006351,GO:0006352,GO:0006353,GO:0006360,GO:0006361,GO:0006363,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009303,GO:0009893,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0016070,GO:0016072,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019222,GO:0019438,GO:0030880,GO:0031974,GO:0031981,GO:0032774,GO:0032991,GO:0034062,GO:0034097,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0040029,GO:0042221,GO:0042790,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0045815,GO:0046483,GO:0048518,GO:0050789,GO:0050896,GO:0051716,GO:0055029,GO:0060255,GO:0061695,GO:0065007,GO:0070013,GO:0070887,GO:0071310,GO:0071345,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0098781,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234,GO:1990823,GO:1990830
EggNOG free text desc.transcription by RNA polymerase I
EggNOG OGsKOG4134@1,KOG4134@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01611,ko00000,ko00001,ko00002,ko03012,ko03021,ko04147
Ec32 ortholog descriptionRNA polymerase Rpb7, N-terminal
Ec32 orthologEc-01_006640.1
Exons4
Model size1345
Cds size711
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1768.4998.1prot_L-elsbetiae_contig1768.4998.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1768 12656..15197 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815737.0751638-UTR-L-elsbetiae_contig1768:12620..126551622815737.0751638-UTR-L-elsbetiae_contig1768:12620..12655Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1768 12621..12655 +
1691683070.0072858-UTR-L-elsbetiae_contig1768:12620..126551691683070.0072858-UTR-L-elsbetiae_contig1768:12620..12655Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1768 12621..12655 +
1622815737.135726-UTR-L-elsbetiae_contig1768:15197..157961622815737.135726-UTR-L-elsbetiae_contig1768:15197..15796Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1768 15198..15796 +
1691683070.0604622-UTR-L-elsbetiae_contig1768:15197..157961691683070.0604622-UTR-L-elsbetiae_contig1768:15197..15796Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1768 15198..15796 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815737.0876136-CDS-L-elsbetiae_contig1768:12655..126851622815737.0876136-CDS-L-elsbetiae_contig1768:12655..12685Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1768 12656..12685 +
1691683070.0185273-CDS-L-elsbetiae_contig1768:12655..126851691683070.0185273-CDS-L-elsbetiae_contig1768:12655..12685Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1768 12656..12685 +
1622815737.0971758-CDS-L-elsbetiae_contig1768:13251..135121622815737.0971758-CDS-L-elsbetiae_contig1768:13251..13512Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1768 13252..13512 +
1691683070.0276675-CDS-L-elsbetiae_contig1768:13251..135121691683070.0276675-CDS-L-elsbetiae_contig1768:13251..13512Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1768 13252..13512 +
1622815737.1101952-CDS-L-elsbetiae_contig1768:13892..140591622815737.1101952-CDS-L-elsbetiae_contig1768:13892..14059Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1768 13893..14059 +
1691683070.0379388-CDS-L-elsbetiae_contig1768:13892..140591691683070.0379388-CDS-L-elsbetiae_contig1768:13892..14059Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1768 13893..14059 +
1622815737.1205907-CDS-L-elsbetiae_contig1768:14944..151971622815737.1205907-CDS-L-elsbetiae_contig1768:14944..15197Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1768 14945..15197 +
1691683070.0459392-CDS-L-elsbetiae_contig1768:14944..151971691683070.0459392-CDS-L-elsbetiae_contig1768:14944..15197Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1768 14945..15197 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1768.4998.1

>prot_L-elsbetiae_contig1768.4998.1 ID=prot_L-elsbetiae_contig1768.4998.1|Name=mRNA_L-elsbetiae_contig1768.4998.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=237bp
MATSPFEELDLKMCVSLLPSDIGDIYAGIRRNIYQFLMRYNESLGGVLLA
VSELSFGDGAKEGRIEDEMPHIHFDVKAKAQVFCPRPGHVLEGRVNKVTS
THVGMLVCGIFNASVASESMGEGFRFDLTTREWRRGGGEVIAVGDDRKFV
VTRMHEAAGLISMEGSLEGLPKEEGGGGDGAESAAANPNKRRAAPEAMEE
DEAAAAAAAAAKAARKKAKKAAKLAAKASKKVKTEL*
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mRNA from alignment at L-elsbetiae_contig1768:12621..15796+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1768.4998.1 ID=mRNA_L-elsbetiae_contig1768.4998.1|Name=mRNA_L-elsbetiae_contig1768.4998.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3176bp|location=Sequence derived from alignment at L-elsbetiae_contig1768:12621..15796+ (Laminarionema elsbetiae ELsaHSoW15)
ACCGGACCTGCTGTGGCTTTGGTGTGTGTGGGACGATGGCGACCTCCCCG TTCGAAGAATTGGATGTGAGTGATCAAACGTATCGCGCCGGATGGTTGTG GACGAAGAGCTGTCCTTTGCAGGAGTCAAAACAAGGCCGCCGAACACGCT ACTTTGGTGTGTGTTGGCTGGTCGCCGTACGTCCGTTGTTCGGCGTCTTG TCTCGGATGCCAGCTGCAACACCAGGGCGCTTGGCATCAGGCGGGTTACG TGAAAAACAATGGTGTATCGCAAAGATGGAAAGGTTGGTAGCATATTCTC GTTCCTCCCAGCAGGTAGCAGCAAGTAGTAGCCAAAACCAAGACAGGGGG TTGGTTGTGTATGTCAGACTAGCGCAGACCGAGAGAGTCTCGGAGTCCTT CGAAACCCTGATACATGTGCATACTTCGTGCAGACATTAGTACATTCGTC TAGATTTGTTCCCTCGAAAGGACACCTGCATCCATTGTAATCTACTACTA ACATCACAAAGTATGGTAGTTTAGTTTCGTTGCACGGTGAACTGAACAGC AGCACCAGCACCAGCACCGGTATGTAACGGCAACACACACCCATGCACTC GTTCCCCGTTCCCCGCGTACCGAATACAAAGCTGAAGATGTGTGTCAGCC TGCTGCCAAGCGACATCGGCGACATCTACGCCGGCATCCGCCGCAACATC TACCAGTTCCTCATGCGGTACAACGAGTCCCTGGGGGGCGTGCTGCTCGC CGTGTCGGAGCTGTCGTTCGGCGACGGGGCGAAGGAGGGCCGCATCGAGG ACGAGATGCCTCACATCCACTTCGACGTGAAGGCCAAGGCGCAGGTATTC TGCCCGCGGCCCGGCCACGTGTTGGAGGGGCGCGTCAACAAGGTGGGGGT TGGGGTTGATTGTTCCGAAAGGGATGAAAAGTGGCGGAGAGGTCGGCGCG CGGGCGTGTCCCCTGAAGCAGGCAGTAAAGCAAGCGTCTGCTTTTTTTTT ACTCCTATATGATGGGTATGTTGTATGCATGGGAGGAACTCCCTGCGCGA CAGCTGGTGGAAGGCACACGTTGGGCAAGACGCGGAGGGATGTGTAACGT TCGAAAATCATTTTTCTGCCGCTTCCCGTAACACGGTACTCGTACTACTA CTGTGTAGGTAAGACATATCTACAAGAGCGGCATATCTAGGTGGGCACCG AACGCTTTTTTCAGGATACGCTGCGCTCCCCTGATGTAACTTACATCTTT AGCCTCCTTCCACCCTCCCCAGGTAACCAGCACCCACGTGGGGATGCTCG TCTGTGGGATATTTAACGCGTCGGTGGCGTCTGAATCTATGGGAGAAGGC TTCAGGTTTGACTTGACGACCAGAGAGTGGCGAAGGGGAGGCGGCGAGGT TATCGCTGTGGGAGACGACCGGAAGTTTGTCGTGACCAGGTGAAAAAGAG GCACAAAGAGAGGGGGTTGCGGAGGGTTGCGGACGTAAAAGAGAGGGTCT GGTCTAGATGGAGGGGCGCACGTTTAGAACTGAAAAAGAAGGGAGGGTGG CGTGTGTTGACGGAGTACAATAAGCACGCGTGCGATGCCTGATGTCACTG CAAGACATTATTAGTCCCTCGCTTAAGTACCTTTATATCTCTGTGCGACG ACGCGTCAGCAACTTCGCAGAAAGCAATTGTTATATGTACTTCGGAATTG AAGCGGATTCTCATGGTTTTGCGGAGTCGAGCGTTTGTTGAAGATTTTTA GAGGTACACACATACTTGGCAAGTTTCGGAGATGCTAGCATATATCTAAC ATTTGTGTTGGTTCTCCTTTTTGAGGGTGGAAGAACTCTGCCAGACCATA CCGTGGTGGAGATGCTTTGCTTGCCGCCGACGAACGGCATCGTGCGCCGG AATGTTTTTGTCTGAAAAAATCGTTCTGCGCAGATTGTGTTTTTCGAGCT TTTGTGTGTGTTTTTTTTCTTGTTCGTTGCGGCATGTGCTTCAGCCGGAT CACTGCCAGCGGAGCTAAATAAATGTAATTTTAGTATCATTGTATTGTGG CAGAATTCACGACGAGCTTGACTGGTGTGAGGCTGCACTCGATTCATCTC TCGATACGATTTATCTTCAGTCCGAGACGTGTTTCATGCATGTTTGTCCC GCCTGCTTAACCATTCGTATTTTTCGAACACAACGTGACCACCGTTCAGT AACCCGGCTTGCCCTGTGCCCCACCCCCAAGGATGTTCTGTCTACTTACA TATGGACCGACCGGTATGTACTTCGCCTGAAACGGGTTCTTTCGTTGCCC CGCGTTGCCACGCCTCGTCCACAGGATGCACGAGGCAGCGGGACTGATAT CGATGGAAGGGTCTCTTGAAGGCCTGCCGAAGGAGGAGGGTGGGGGGGGC GATGGAGCGGAGAGCGCCGCGGCAAACCCCAACAAGCGGCGGGCGGCGCC AGAGGCGATGGAAGAAGATGAGGCCGCCGCCGCCGCCGCCGCCGCTGCGA AGGCTGCCAGGAAGAAAGCGAAAAAGGCGGCGAAGCTGGCAGCGAAGGCC AGCAAAAAAGTCAAAACGGAGTTGTAGCGCTCTGTTGGTGATGGGTGACT TGGCAGGGGGGAAGGACTGGTGGGGGTGGAGATGGTGGTGGTGCCATACC GCTGTTGCTCTGACGCCAAGGGATCCGATGTCGCAGCAGTATCGGGGCGC GGGAGGGGCGTAGCATGCGGTATTTTGGTGGTACCCTCGCGACGGCAGAT GAAGATGGAGATGGCGGTAGGGACTGCCGCCTCACCGTTTGTTTTGTTCC ATGGGGTGTGTTGTTCGTGGTGGCGTTTTTATTACTTGATTACAGCAGAG TGGTGTACGATTAGTGAGGGTTGTGTGTTTTTGTTGTTGTTTTGTTTTAA GGCATTCGTTGCCGCATACAGCCGTGGTTGGCCTCCCAGCTGCGGGGACG ACGGCCGCTCTCTTCACGAAGGGGTTTTCTTGGCGGTGTCTTGTTTAGGC CCGATGGGTTTGTTTGTCTTGTATACTAATATCTCAGCTGTTCGAAACAG TCGTAAATACTACGCAGAGACCGAAAATGGTGCGCTGCTTCTAAATTTGC TCGGACCCTCGTCCGAGCAGTGGTAAACATGTGGGTATCCGTATCCGTAT CCGTAAGAAGAAAACAAATACCTGGT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1768:12621..15796+

>mRNA_L-elsbetiae_contig1768.4998.1 ID=mRNA_L-elsbetiae_contig1768.4998.1|Name=mRNA_L-elsbetiae_contig1768.4998.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1422bp|location=Sequence derived from alignment at L-elsbetiae_contig1768:12621..15796+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCGACCTCCCCGTTCGAAGAATTGGATATGGCGACCTCCCCGTTCGA
AGAATTGGATCTGAAGATGTGTGTCAGCCTGCTGCCAAGCGACATCGGCG
ACATCTACGCCGGCATCCGCCGCAACATCTACCAGTTCCTCATGCGGTAC
AACGAGTCCCTGGGGGGCGTGCTGCTCGCCGTGTCGGAGCTGTCGTTCGG
CGACGGGGCGAAGGAGGGCCGCATCGAGGACGAGATGCCTCACATCCACT
TCGACGTGAAGGCCAAGGCGCAGGTATTCTGCCCGCGGCCCGGCCACGTG
TTGGAGGGGCGCGTCAACAAGCTGAAGATGTGTGTCAGCCTGCTGCCAAG
CGACATCGGCGACATCTACGCCGGCATCCGCCGCAACATCTACCAGTTCC
TCATGCGGTACAACGAGTCCCTGGGGGGCGTGCTGCTCGCCGTGTCGGAG
CTGTCGTTCGGCGACGGGGCGAAGGAGGGCCGCATCGAGGACGAGATGCC
TCACATCCACTTCGACGTGAAGGCCAAGGCGCAGGTATTCTGCCCGCGGC
CCGGCCACGTGTTGGAGGGGCGCGTCAACAAGGTAACCAGCACCCACGTG
GGGATGCTCGTCTGTGGGATATTTAACGCGTCGGTGGCGTCTGAATCTAT
GGGAGAAGGCTTCAGGTTTGACTTGACGACCAGAGAGTGGCGAAGGGGAG
GCGGCGAGGTTATCGCTGTGGGAGACGACCGGAAGTTTGTCGTGACCAGG
TAACCAGCACCCACGTGGGGATGCTCGTCTGTGGGATATTTAACGCGTCG
GTGGCGTCTGAATCTATGGGAGAAGGCTTCAGGTTTGACTTGACGACCAG
AGAGTGGCGAAGGGGAGGCGGCGAGGTTATCGCTGTGGGAGACGACCGGA
AGTTTGTCGTGACCAGGATGCACGAGGCAGCGGGACTGATATCGATGGAA
GGGTCTCTTGAAGGCCTGCCGAAGGAGGAGGGTGGGGGGGGCGATGGAGC
GGAGAGCGCCGCGGCAAACCCCAACAAGCGGCGGGCGGCGCCAGAGGCGA
TGGAAGAAGATGAGGCCGCCGCCGCCGCCGCCGCCGCTGCGAAGGCTGCC
AGGAAGAAAGCGAAAAAGGCGGCGAAGCTGGCAGCGAAGGCCAGCAAAAA
AGTCAAAACGGAGTTGTAGGATGCACGAGGCAGCGGGACTGATATCGATG
GAAGGGTCTCTTGAAGGCCTGCCGAAGGAGGAGGGTGGGGGGGGCGATGG
AGCGGAGAGCGCCGCGGCAAACCCCAACAAGCGGCGGGCGGCGCCAGAGG
CGATGGAAGAAGATGAGGCCGCCGCCGCCGCCGCCGCCGCTGCGAAGGCT
GCCAGGAAGAAAGCGAAAAAGGCGGCGAAGCTGGCAGCGAAGGCCAGCAA
AAAAGTCAAAACGGAGTTGTAG
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