mRNA_L-elsbetiae_contig1768.4998.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1768.4998.1 vs. uniprot
Match: A0A6H5JDH5_9PHAE (RPA43_OB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JDH5_9PHAE) HSP 1 Score: 314 bits (804), Expect = 3.190e-102 Identity = 156/181 (86.19%), Postives = 166/181 (91.71%), Query Frame = 3 Query: 36 MATSPFEELDLKMCVSLLPSDIGDIYAGIRRNIYQFLMRYNESLGGVLLAVSELSFGDGAKEGRIEDEMPHIHFDVKAKAQVFCPRPGHVLEGRVNKVTSTHVGMLVCGIFNASVASESMGEGFRFDLTTREWRRGGG------EVIAVGDDRKFVVTRMHEAAGLISMEGSLEGLPKEEG 560 MA SPFEE++LKMCVSLLPSDIGDIYAGIRRNIYQFLMRYNE+LGGVLLAVS LSFGDGA+EGRIEDEMPHIHFDVKAKAQVF PRPGHVL+GRVNKVTSTHVGMLVCGIFNASVASESMGEGFRFD+T REW+R G EVIAVG D +FVVTRMHEAAGLIS+EGSLEGLPK +G Sbjct: 1 MAASPFEEVELKMCVSLLPSDIGDIYAGIRRNIYQFLMRYNEALGGVLLAVSNLSFGDGAREGRIEDEMPHIHFDVKAKAQVFRPRPGHVLQGRVNKVTSTHVGMLVCGIFNASVASESMGEGFRFDMTAREWQRSRGGKDGAREVIAVGADTQFVVTRMHEAAGLISIEGSLEGLPKADG 181
BLAST of mRNA_L-elsbetiae_contig1768.4998.1 vs. uniprot
Match: A0A835Z8S8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8S8_9STRA) HSP 1 Score: 164 bits (415), Expect = 2.420e-40 Identity = 84/196 (42.86%), Postives = 114/196 (58.16%), Query Frame = 3 Query: 33 TMATSPFEELDLKMCVSLLPSDIGDIYAGIRRNIYQFLMRYNESLGGVLLAVSELSFGDGAKEGRIEDEMPHIHFDVKAKAQVFCPRPGHVLEGRVNK-------------VTSTHVGMLVCGIFNASV-ASESMGEGFRFDLTTREWRRG--------------GGEVIAVGDDRKFVVTRMHEAAGLISMEGSL 536 T SPFEE+ L +C+SLLP + DI+ IR+N+Y+ LM YN +GGV++A+ ++ DG GRI +EMPH+HF+++A AQVF PR G +L GRV K V+ THV MLVCGIFNAS+ A E G G+ + W R G + + +G F V R+H+A GLIS+EG L Sbjct: 39 TTVVSPFEEVSLALCISLLPHALSDIFGSIRKNVYKLLMHYNRDVGGVIVALGDIRMADGEHHGRIMEEMPHLHFNIEANAQVFRPRSGALLNGRVMKPPLHAAFSCVYAQVSGTHVSMLVCGIFNASIYAGELEGVGYAYSDARARWERXXXXXXXXXXXXXXXGPDAVEMGTSLDFTVRRLHQAQGLISIEGGL 234
BLAST of mRNA_L-elsbetiae_contig1768.4998.1 vs. uniprot
Match: A0A4D9D057_9STRA (RPA43_OB domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D057_9STRA) HSP 1 Score: 138 bits (347), Expect = 5.760e-34 Identity = 70/172 (40.70%), Postives = 107/172 (62.21%), Query Frame = 3 Query: 48 PFEELDLKMCVSLLPSDIGDIYAGIRRNIYQFLMRYNESLGGVLLAVSELSFGDGAKEGRIEDEMPHIHFDVKAKAQVFCPRPGHVLEGRVNKVTSTHVGMLVCGIFNASVASESMGEGFRFDLTTREW-RRGGGEVIAVGDDRKFVVTRMHEAAGLISMEGSLEGLPKEEG 560 PF+E + ++LLP +G++ I ++ LM+YN+ +GG+LL +S++ F + + ++PH+H V+A + VF P PG L G V KVTSTHV +LV +FNA++A E M E + FD W GG EV+ +G++ F V +HEAAGLI+++GSL +EEG Sbjct: 31 PFQEQRVLFKLALLPDAMGNLEESIHEKLHDMLMKYNQDVGGILLTLSQVRFPPSRRFASVMGDLPHLHVRVEATSLVFTPEPGMSLTGVVIKVTSTHVALLVYDLFNAAIAREDMPEAYAFDNDREAWVGTGGKEVLGLGEEVAFRVALVHEAAGLIALDGSL----REEG 198
BLAST of mRNA_L-elsbetiae_contig1768.4998.1 vs. uniprot
Match: A0A024G6Y8_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G6Y8_9STRA) HSP 1 Score: 118 bits (295), Expect = 4.380e-27 Identity = 60/173 (34.68%), Postives = 100/173 (57.80%), Query Frame = 3 Query: 39 ATSPFEELDLKMCVSLLPSDIGDIYAGIRRNIYQFLMRYNESLGGVLLAVSELSFGDGAKEGRIEDEMPHIHFDVKAKAQVFCPRPGHVLEGRVNKVTSTHVGMLVCGIFNASVASESMGEGFRFDLTTREWRRGGGEVIAVGDDRKFVVTRMHEAAGLISMEGSLEGLPKEE 557 A+SPF + ++ +SL P + D GI++ + + +M+YNE+L GV+L + + G I + P++H + A A VF PR G +L+ ++NK+ S H+GML G+FN SVA+ + EGF ++ W G++I V D + R+ A G+IS+E S++ KE+ Sbjct: 19 ASSPFVSIKVRHSLSLSPCHLSDPLEGIKQELDESVMQYNETLKGVILCFDSVRLIE--PHGHIISDSPYVHCKIIANALVFQPRQGMLLKAQINKIGSNHIGMLFVGVFNGSVAASELPEGFVYNYHKESWIGNDGDIINVDDIVTVKIQRVRVAGGMISIEASMKVDQKEQ 189
BLAST of mRNA_L-elsbetiae_contig1768.4998.1 vs. uniprot
Match: A0A2D4BXV9_PYTIN (S1 motif domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXV9_PYTIN) HSP 1 Score: 118 bits (295), Expect = 9.340e-27 Identity = 66/165 (40.00%), Postives = 95/165 (57.58%), Query Frame = 3 Query: 45 SPFEEL-DLKMCVSLLPSDIGDIYAGIRRNIYQFLMRYNESLGGVLLAVSELSFGDGAKEGRIEDEMPHIHFDVKAKAQVFCPRPGHVLEGRVNKVTSTHVGMLVCGIFNASVASESMGEGFRFDLTTREWRRGGGEVIAVGDDRKFVVTRMHEAAGLISMEGSL 536 SPF ++ VSLLP IGD GI + + LMRY++ L GV+L+ S + + G I +E P+IH V A A VF PR G L G VNK+ S HVG+L+ G+FN SVA+ + +G+ + W+ G I+VG+ V R+H A G+I++E S+ Sbjct: 3 SPFVLCKQIRQPVSLLPCHIGDARLGIDQEMTALLMRYSDKLEGVILSFSNVRLEKPS--GHILNEQPYIHCKVIADALVFQPRVGMTLSGVVNKIGSNHVGLLIAGVFNGSVAASELPKGYVHNYAEDAWKGADGTTISVGETITVKVARVHVAGGMIAIEASM 165
BLAST of mRNA_L-elsbetiae_contig1768.4998.1 vs. uniprot
Match: A0A1V9ZJD1_9STRA (RPA43_OB domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZJD1_9STRA) HSP 1 Score: 117 bits (294), Expect = 1.000e-26 Identity = 67/174 (38.51%), Postives = 93/174 (53.45%), Query Frame = 3 Query: 45 SPFEELDLKMCVSLLPSDIGDIYAGIRRNIYQFLMRYNESLGGVLLAVSELSFGDGAK----EGRIEDEMPHIHFDVKAKAQVFCPRPGHVLEGRVNKVTSTHVGMLVCGIFNASVASESMGEGFRFDLTTREWRRGGGEVIAVGDDRKFVVTRMHEAAGLISMEGSLEGLPKE 554 SPF L M SL P I D G+ + LM+Y E + GV+LA DG K G I +E P+IH V +A VF P+ G L VNKV S+H+G+L+ G+FN S+A+ M +G+ + W G IA+ + F V R+H A G+IS+EGS+ G K+ Sbjct: 2 SPFVNAKLVMSCSLAPCHIHDAKKGLEEQLNLMLMKYCEPVEGVVLAF------DGIKLLNPYGHIINETPYIHVKVATEALVFRPKAGMTLSANVNKVGSSHIGLLLAGVFNVSIAAADMPKGYAHSYSDDAWINEDGATIALESEVSFTVVRVHVAHGVISIEGSMRGSKKK 169
BLAST of mRNA_L-elsbetiae_contig1768.4998.1 vs. uniprot
Match: A0A7S1XUY3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUY3_9STRA) HSP 1 Score: 113 bits (282), Expect = 2.110e-26 Identity = 50/100 (50.00%), Postives = 67/100 (67.00%), Query Frame = 3 Query: 45 SPFEELDLKMCVSLLPSDIGDIYAGIRRNIYQFLMRYNESLGGVLLAVSELSFGDGAKEGRIEDEMPHIHFDVKAKAQVFCPRPGHVLEGRVNKVTSTHV 344 SPFE + L++C SLLPS +GD+ G+RR +++ LMRY GGV++ + F GA+ GRI DE PHIHFD+ A+A VF P+ G L G V +V THV Sbjct: 34 SPFEVVTLRVCCSLLPSSLGDVPGGVRRQLFRLLMRYLPEAGGVVVGFQNIGFAPGARHGRIHDEEPHIHFDIVARALVFAPQAGLELVGEVQRVAQTHV 133
BLAST of mRNA_L-elsbetiae_contig1768.4998.1 vs. uniprot
Match: A0A6G0XIV8_9STRA (RPA43_OB domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XIV8_9STRA) HSP 1 Score: 115 bits (289), Expect = 5.800e-26 Identity = 65/167 (38.92%), Postives = 94/167 (56.29%), Query Frame = 3 Query: 45 SPFEELDLKMCVSLLPSDIGDIYAGIRRNIYQFLMRYNESLGGVLLAVSELSFGDGAKEGRIEDEMPHIHFDVKAKAQVFCPRPGHVLEGRVNKVTSTHVGMLVCGIFNASVASESMGEGFRFDLTTREWRRGGGEVIAVGDDRKFVVTRMHEAAGLISMEGSLEGL 545 SPF + L M VSL P I + G+ + Q LM+Y E + GVLL+ + L + G I +E P IH V A A VF P PG L VNK+ S H+G+L+ G+FN S+A+ M GF + W G I++ D+ +F V ++HEA G+IS++G+L + Sbjct: 3 SPFAKAKLVMSVSLAPYHIQNAKKGLEDQLSQMLMKYCEPVQGVLLSFNSLQMIN--PYGHIINETPFIHVRVAADALVFRPTPGMKLSATVNKIGSNHIGLLLAGVFNVSIAATEMPSGFVHNHFEEAWVGEDGASISLQDEVRFKVLQVHEAHGVISIDGTLRSV 167
BLAST of mRNA_L-elsbetiae_contig1768.4998.1 vs. uniprot
Match: A0A058ZEH9_FONAL (RPA43_OB domain-containing protein n=1 Tax=Fonticula alba TaxID=691883 RepID=A0A058ZEH9_FONAL) HSP 1 Score: 115 bits (287), Expect = 2.340e-25 Identity = 68/182 (37.36%), Postives = 103/182 (56.59%), Query Frame = 3 Query: 39 ATSPFEELDLKMCVSLLPSDIGDIYAGIRRNIYQFLMRYNESLGGVLLAVSELSFGDGAKE----------GRIEDEMPHIHFDVKAKAQVFCPRPGHVLEGRVNKVTSTHVGMLVCGIFNASVASESMGEGFRFDLTTREWRRG---GGEV-IAVGDDRKFVVTRMHEAAGLISMEGSLEG 542 A SPF + + + LLP+D+GD GI + + L+ +++ +GG +L+ S++ F D A + GRI ++ P IH V+AK VF P+ G L G V K+ VGMLV G+FNAS+ +E++G F +D + +R+ G EV IAVG F V R+ G+++M GSL G Sbjct: 13 AESPFSMVTANLYMHLLPADMGDPRRGIDQRLNAMLLHHSQHIGGTVLSYSDVQFLDDAGKPASSTKNIVSGRIINDAPFIHVTVRAKFLVFKPKVGSQLVGSVIKIGPDQVGMLVLGLFNASIPTENLGSEFAYDYSEGVYRKASKSGSEVAIAVGTRLAFSVQRLDTVNGILAMTGSLRG 194
BLAST of mRNA_L-elsbetiae_contig1768.4998.1 vs. uniprot
Match: A0A484EH94_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EH94_BRELC) HSP 1 Score: 112 bits (281), Expect = 8.530e-25 Identity = 63/153 (41.18%), Postives = 91/153 (59.48%), Query Frame = 3 Query: 78 VSLLPSDIGDIYAGIRRNIYQFLMRYNESLGGVLLAVSELSFGDGAKEGRIEDEMPHIHFDVKAKAQVFCPRPGHVLEGRVNKVTSTHVGMLVCGIFNASVASESMGEGFRFDLTTREWRRGGGEVIAVGDDRKFVVTRMHEAAGLISMEGSL 536 VSL P D AGI +N+ LM+Y+E L GV+L+ SE+ G I +EMP+IH V A A VF P+ G +L G VNK+ S H+GML+ G+FN SVA + G+ + + W G IAV +D + V R+H A+G+I++E ++ Sbjct: 12 VSLSPCHAEDARAGIEQNLNDQLMQYSEPLKGVVLSFSEVQLDK--PYGVIVNEMPYIHCKVLADALVFRPKKGMILRGVVNKIGSNHIGMLIAGVFNGSVAGAELPVGYVHNYSQDCWLAKDGSSIAVENDVQVKVLRVHVASGMIAIEATM 162 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1768.4998.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1768.4998.1 >prot_L-elsbetiae_contig1768.4998.1 ID=prot_L-elsbetiae_contig1768.4998.1|Name=mRNA_L-elsbetiae_contig1768.4998.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=237bp MATSPFEELDLKMCVSLLPSDIGDIYAGIRRNIYQFLMRYNESLGGVLLAback to top mRNA from alignment at L-elsbetiae_contig1768:12621..15796+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1768.4998.1 ID=mRNA_L-elsbetiae_contig1768.4998.1|Name=mRNA_L-elsbetiae_contig1768.4998.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3176bp|location=Sequence derived from alignment at L-elsbetiae_contig1768:12621..15796+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1768:12621..15796+ >mRNA_L-elsbetiae_contig1768.4998.1 ID=mRNA_L-elsbetiae_contig1768.4998.1|Name=mRNA_L-elsbetiae_contig1768.4998.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1422bp|location=Sequence derived from alignment at L-elsbetiae_contig1768:12621..15796+ (Laminarionema elsbetiae ELsaHSoW15)back to top |