mRNA_L-elsbetiae_contig17673.4994.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig17673.4994.1 vs. uniprot
Match: D7FYC9_ECTSI (Similar to TAK1 (TGF-beta-activated kinase) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYC9_ECTSI) HSP 1 Score: 133 bits (334), Expect = 2.890e-35 Identity = 60/108 (55.56%), Postives = 81/108 (75.00%), Query Frame = 1 Query: 1 CPAQSSKRNRREPWPSPENFAGKPLTEATDVYSLGMIFYALLRGDKPFGDNKEQFD-LALEGRYRPPMDPSWHKDYAQVVEDMWLQDPKKRPSARQVVARLQDIKEKL 321 CP ++ KRNR E WPSPEN+AG+PLTE +D+YS+ M+FY+LL G PFG + + A + RP +DPSWH+ Y Q+V+DMW +DP +RPSARQ+VARL+ I+E L Sbjct: 268 CPVRAKKRNRLEAWPSPENYAGQPLTETSDIYSMAMVFYSLLSGTPPFGGPEGLAEAFATRTQPRPLVDPSWHRGYVQIVQDMWNEDPMRRPSARQIVARLEIIEEDL 375
BLAST of mRNA_L-elsbetiae_contig17673.4994.1 vs. uniprot
Match: A0A6H5K7R0_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7R0_9PHAE) HSP 1 Score: 133 bits (335), Expect = 6.110e-35 Identity = 59/107 (55.14%), Postives = 80/107 (74.77%), Query Frame = 1 Query: 1 CPAQSSKRNRREPWPSPENFAGKPLTEATDVYSLGMIFYALLRGDKPFGDNKEQFDLALEGRYRPPMDPSWHKDYAQVVEDMWLQDPKKRPSARQVVARLQDIKEKL 321 CPAQS+KRN PWPSPEN+AG+PLT A D+YSL MIFY+L+ G P+ N E+ A+ + RP +DPSWHK + +VV+DMW Q P++RPSA +VV RLQ ++ ++ Sbjct: 324 CPAQSAKRNLPTPWPSPENYAGEPLTPANDIYSLAMIFYSLMAGSLPYEGNPERLARAMSSQGRPEIDPSWHKGFMKVVQDMWNQTPQRRPSAERVVVRLQLVQAEI 430
BLAST of mRNA_L-elsbetiae_contig17673.4994.1 vs. uniprot
Match: D7G7W7_ECTSI (Similar to TAK1 (TGF-beta-activated kinase) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7W7_ECTSI) HSP 1 Score: 129 bits (325), Expect = 1.240e-34 Identity = 58/107 (54.21%), Postives = 80/107 (74.77%), Query Frame = 1 Query: 1 CPAQSSKRNRREPWPSPENFAGKPLTEATDVYSLGMIFYALLRGDKPFGDNKEQFDLALEGRYRPPMDPSWHKDYAQVVEDMWLQDPKKRPSARQVVARLQDIKEKL 321 CPAQS+KRN PWPSPEN+AG+PLT A+D+YSL MIF++L+ P+ N E A+ + RP +DPSWHK + +VV+DMW Q P+KRPSA++VV RLQ ++ ++ Sbjct: 182 CPAQSTKRNLPTPWPSPENYAGEPLTPASDIYSLAMIFFSLMAASLPYEGNPELLARAMSRQGRPEIDPSWHKGFMKVVQDMWHQTPQKRPSAKRVVVRLQLLQAEI 288
BLAST of mRNA_L-elsbetiae_contig17673.4994.1 vs. uniprot
Match: D8LN76_ECTSI (Serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN76_ECTSI) HSP 1 Score: 128 bits (321), Expect = 1.720e-34 Identity = 56/107 (52.34%), Postives = 81/107 (75.70%), Query Frame = 1 Query: 1 CPAQSSKRNRREPWPSPENFAGKPLTEATDVYSLGMIFYALLRGDKPFGDNKEQFDLALEGRYRPPMDPSWHKDYAQVVEDMWLQDPKKRPSARQVVARLQDIKEKL 321 CPA ++K R PW +PEN AGKPL+E D+Y++GMI+++L+ G PF D +E F+ A E + RP +DPSWHK + ++ +DMW QDP++RPSARQVV RL+D++ +L Sbjct: 141 CPANAAKPARIVPWRAPENVAGKPLSEKVDIYAMGMIYFSLISGGVPFPD-QEAFERAYEAKLRPEIDPSWHKGFTRIFQDMWHQDPERRPSARQVVLRLEDLQREL 246
BLAST of mRNA_L-elsbetiae_contig17673.4994.1 vs. uniprot
Match: D8LMS6_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMS6_ECTSI) HSP 1 Score: 121 bits (304), Expect = 1.210e-32 Identity = 60/107 (56.07%), Postives = 75/107 (70.09%), Query Frame = 1 Query: 1 CPAQSSKRNRREPWPSPENFAGKPLTEATDVYSLGMIFYALLRGDKPFGDNKEQFDLALEGRYRPPMDPSWHKDYAQVVEDMWLQDPKKRPSARQVVARLQDIKEKL 321 CPA+ SKRN+ P PSPEN+AG+PLT + DVYS+G+IFYAL+ G PF K+ L RP M P WHK Y QV++DMW +DP KRPSA +VV RL+ I E+L Sbjct: 66 CPARWSKRNKLAPRPSPENYAGQPLTFSVDVYSMGIIFYALIAGRLPF--TKQGVQLVRMSTARPEMAPWWHKGYTQVIQDMWARDPDKRPSAGEVVERLEHILEEL 170
BLAST of mRNA_L-elsbetiae_contig17673.4994.1 vs. uniprot
Match: D7FNX1_ECTSI (Serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX1_ECTSI) HSP 1 Score: 118 bits (296), Expect = 9.030e-30 Identity = 53/107 (49.53%), Postives = 75/107 (70.09%), Query Frame = 1 Query: 1 CPAQSSKRNRREPWPSPENFAGKPLTEATDVYSLGMIFYALLRGDKPFGDNKEQFDLALEGRYRPPMDPSWHKDYAQVVEDMWLQDPKKRPSARQVVARLQDIKEKL 321 CP + + R PW +PEN AGKP+TE D+Y++GMI+Y+L+ G PF D E FD A RP +DPSWHK + ++++DMW +DP +RP ARQVV RLQ ++++L Sbjct: 259 CPILTGRPARLVPWRAPENIAGKPVTEKVDIYAMGMIYYSLVSGGLPFPD-VETFDEARAAHERPEIDPSWHKGFVEIIQDMWHEDPDERPFARQVVQRLQALQDEL 364
BLAST of mRNA_L-elsbetiae_contig17673.4994.1 vs. uniprot
Match: A0A6H5LAH0_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAH0_9PHAE) HSP 1 Score: 117 bits (294), Expect = 2.510e-29 Identity = 54/98 (55.10%), Postives = 70/98 (71.43%), Query Frame = 1 Query: 37 PWPSPENFAGKPLTEATDVYSLGMIFYALLRGDKPFGDNKEQFDLALEGRYRPPMDPSWHKDYAQVVEDMWLQDPKKRPSARQVVARLQDIKEKLPRF 330 PW PEN+AGKPLTE D+YS+GMIFY+L+ G P+ D E A+ +P +DPSWH+ Y +VVE MWL DP++RPSARQVV RL I+E++ F Sbjct: 286 PWRPPENYAGKPLTEKADIYSMGMIFYSLIAGRNPY-DTPEALKTAVSHGSKPEVDPSWHRGYMEVVERMWLDDPERRPSARQVVVRLTAIQEEVGTF 382
BLAST of mRNA_L-elsbetiae_contig17673.4994.1 vs. uniprot
Match: D8LN73_ECTSI (Serine/threonine/tyrosine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN73_ECTSI) HSP 1 Score: 115 bits (287), Expect = 3.530e-29 Identity = 51/97 (52.58%), Postives = 70/97 (72.16%), Query Frame = 1 Query: 40 WPSPENFAGKPLTEATDVYSLGMIFYALLRGDKPFGDNKEQFDLALEGRYRPPMDPSWHKDYAQVVEDMWLQDPKKRPSARQVVARLQDIKEKLPRF 330 W PEN+AGKPLTE D+YS+GMIFY+++ G P+ D E A+ +P +DPSWH+ + +VVE MWL DP++RPSARQVV RL I+E++ +F Sbjct: 173 WRPPENYAGKPLTEKADIYSMGMIFYSVIAGRNPY-DTPEALQTAVSHGSKPEVDPSWHRGFMEVVEQMWLDDPERRPSARQVVTRLTAIQEEVGKF 268
BLAST of mRNA_L-elsbetiae_contig17673.4994.1 vs. uniprot
Match: A0A6H5JU33_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU33_9PHAE) HSP 1 Score: 108 bits (271), Expect = 1.470e-26 Identity = 53/124 (42.74%), Postives = 76/124 (61.29%), Query Frame = 1 Query: 1 CPAQSSKRNRREPWPSPENFAGK-----------------PLTEATDVYSLGMIFYALLRGDKPFGDNKEQFDLALEGRYRPPMDPSWHKDYAQVVEDMWLQDPKKRPSARQVVARLQDIKEKL 321 CP + + R PW +PEN AGK P+TE D+Y++GMI+Y+L+ G PF D E FD A RP +DPSWHK + ++++DMW +DP++RP ARQVV RLQ ++++L Sbjct: 180 CPILTGRPARLVPWKAPENIAGKVFNSGNPLGSTVSTFARPVTEKVDIYAMGMIYYSLISGGLPFPD-VETFDEARAAHDRPEIDPSWHKGFVEIIQDMWHEDPEERPFARQVVQRLQALQDEL 302
BLAST of mRNA_L-elsbetiae_contig17673.4994.1 vs. uniprot
Match: A0A6H5JFK2_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFK2_9PHAE) HSP 1 Score: 95.5 bits (236), Expect = 5.980e-21 Identity = 49/108 (45.37%), Postives = 69/108 (63.89%), Query Frame = 1 Query: 1 CPAQSSKRNRREPWPSPENFAGKPLTEATDVYSLGMIFYALLRGDKPFGDNKEQFDLALEGRYRPPMDPSWHKDYAQVVEDMWLQDPKKRPSARQVVARLQDIKEKLP 324 CP SK N W SPE +AG+ LTE D+YSLG IF+A+L PF + + L G RP ++PSWH ++ Q+ DMW +DP++RP+AR+VV RL+ + +LP Sbjct: 290 CPFYISKGNGV--WRSPEEYAGEGLTEKLDIYSLGNIFWAMLGRKPPFVRDDDYKGKVLRGE-RPKVNPSWHPEFVQLFTDMWKRDPRERPTAREVVLRLEAMYAELP 394 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17673.4994.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig17673.4994.1 >prot_L-elsbetiae_contig17673.4994.1 ID=prot_L-elsbetiae_contig17673.4994.1|Name=mRNA_L-elsbetiae_contig17673.4994.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=111bp CPAQSSKRNRREPWPSPENFAGKPLTEATDVYSLGMIFYALLRGDKPFGDback to top mRNA from alignment at L-elsbetiae_contig17673:725..2245+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig17673.4994.1 ID=mRNA_L-elsbetiae_contig17673.4994.1|Name=mRNA_L-elsbetiae_contig17673.4994.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1521bp|location=Sequence derived from alignment at L-elsbetiae_contig17673:725..2245+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig17673:725..2245+ >mRNA_L-elsbetiae_contig17673.4994.1 ID=mRNA_L-elsbetiae_contig17673.4994.1|Name=mRNA_L-elsbetiae_contig17673.4994.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=666bp|location=Sequence derived from alignment at L-elsbetiae_contig17673:725..2245+ (Laminarionema elsbetiae ELsaHSoW15)back to top |